Pregenerated sensors for MMADHC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026766

Ensembl transcript IDs: ENSMUST00000102769.11

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	ATTAAAGTTTTCCCAATAAAGGGGAGAATCAACCCTAAGAGAACACACATACCCACAGACAAACAGCGCTaGAGGGATCACAGTGCCAGC	+
Preference number: 2 (lower is better) Translates to: IKVFPIKGRINPKRTHIPTDKQR*RDHSAS Trigger: GCTGGCACTGTGATCCCTGCAGCGCTGTTTGTCTGT...GGGTATGTGTGTTCTCTTAGGGTTGATTCTCCCCTTTATTGGGAAAACTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
3UTR-3UTR GCA 90 bp	ACATACCCTGGTTACAAGCTGATGACCTCACTTTGCAGAATATGGATGTGTTCAATAGGAACTAGCATTTaGAATTCTGAAACCCCAAGT	+
Preference number: 2 (lower is better) Translates to: TYPGYKLMTSLCRIWMCSIGTSI*NSETPS Trigger: ACTTGGGGTTTCAGAATTGCAAATGCTAGTTCCTAT...TGAACACATCCATATTCTGCAAAGTGAGGTCATCAGCTTGTAACCAGGGTATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
3UTR CCA 72 bp	AAGGGGAGAATCAACCCTAAGAGAACACACATACCCTaGTTACAAGCTGATGACCTCACTTTGCAGAATATG	+
Preference number: 3 (lower is better) Translates to: KGRINPKRTHIP*LQADDLTLQNM Trigger: CATATTCTGCAAAGTGAGGTCATCAGCTTGTAACCAGGGTATGTGTGTTCTCTTAGGGTTGATTCTCCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR CCA 90 bp	GGGAGAATCAACCCTAAGAGAACACACATACCCTGGTTACAAGCTGATGACCTCTCGAGAGCATATATCTaGAGGTGCGGTGGCCACATG	+
Preference number: 4 (lower is better) Translates to: GRINPKRTHIPWLQADDLSRAYI*RCGGHM Trigger: CATGTGGCCACCGCACCTCCAGATATATGCTCTCGA...GAGGTCATCAGCTTGTAACCAGGGTATGTGTGTTCTCTTAGGGTTGATTCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR TCA 90 bp	AGTGTTTATATAGAGCAATCCATGACAGACAAACAGCGCTGCAGGGATCACAGTTGGAATCTCTGGTCCTaGGGTCCAAAGGGTCCCATA	+
Preference number: 4 (lower is better) Translates to: SVYIEQSMTDKQRCRDHSWNLWS*GPKGPI Trigger: TATGGGACCCTTTGGACCTCAGGACCAGAGATTCCA...ACTGTGATCCCTGCAGCGCTGTTTGTCTGTCATGGATTGCTCTATATAAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR TCA 90 bp	ATTAAAGTTTTCCCAATAAAGGGGAGAATCAACCCTAAGAGAACACACATACCCGTGCCCCAGAGACTGTaGCGGATCACTTTACAGCAG	+
Preference number: 4 (lower is better) Translates to: IKVFPIKGRINPKRTHIPVPQRL*RITLQQ Trigger: CTGCTGTAAAGTGATCCGTCACAGTCTCTGGGGCAC...GGGTATGTGTGTTCTCTTAGGGTTGATTCTCCCCTTTATTGGGAAAACTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR GCA 90 bp	ATTAAAGTTTTCCCAATAAAGGGGAGAATCAACCCTAAGAGAACACACATACCCCTACAACCACATGAGTaGCCCAGAGACTGTGACGGA	+
Preference number: 4 (lower is better) Translates to: IKVFPIKGRINPKRTHIPLQPHE*PRDCDG Trigger: TCCGTCACAGTCTCTGGGGCACTCATGTGGTTGTAG...GGGTATGTGTGTTCTCTTAGGGTTGATTCTCCCCTTTATTGGGAAAACTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR CCA 90 bp	ATTAAAGTTTTCCCAATAAAGGGGAGAATCAACCCTAAGAGAACACACATACCCTATCTGGAGGTGCGGTaGCCACATGAGACTCATCAG	+
Preference number: 4 (lower is better) Translates to: IKVFPIKGRINPKRTHIPYLEVR*PHETHQ Trigger: CTGATGAGTCTCATGTGGCCACCGCACCTCCAGATA...GGGTATGTGTGTTCTCTTAGGGTTGATTCTCCCCTTTATTGGGAAAACTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR GCA 90 bp	GACCTCACTTTGCAGAATATGGATGTGTTCAGCATGCACTCCAGAATAGGAACTAACTCATTTACATACTaGGCCATCACAAACTCGTGT	+
Preference number: 4 (lower is better) Translates to: DLTLQNMDVFSMHSRIGTNSFTY*AITNSC Trigger: ACACGAGTTTGTGATGGCGCAGTATGTAAATGAGTT...AGTTCCTATTCTGGAGTGCATGCTGAACACATCCATATTCTGCAAAGTGAGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR CCA 90 bp	ACATACCCTGGTTACAAGCTGATGACCTCACTTTGCAGAATATGGATGTGTTCAAAAGTTTTATGGGCCTaGCTTTTCTTCTGTGAGGCA	+
Preference number: 4 (lower is better) Translates to: TYPGYKLMTSLCRIWMCSKVLWA*LFFCEA Trigger: TGCCTCACAGAAGAAAAGCCAGGCCCATAAAACTTT...TGAACACATCCATATTCTGCAAAGTGAGGTCATCAGCTTGTAACCAGGGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR CCA 90 bp	ATTCTGAAACCCCAAGTCACCTGTCCATGTAAACCCATAAATGATACAATAAATAGCTCTGGACATGTCTaGATCGCACACTCAACTTTG	+
Preference number: 4 (lower is better) Translates to: ILKPQVTCPCKPINDTINSSGHV*IAHSTL Trigger: CAAAGTTGAGTGTGCGATCCAGACATGTCCAGAGCT...ATTTATTGTATCATTTATGGGTTTACATGGACAGGTGACTTGGGGTTTCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR CAA 90 bp	CACATACCCTGGTTACAAGCTGATGACCTCACTTTGCAGAATATGGATGTGTTCACTCGTGTCTTTCAGTaGAAAGAGGCTCTGCTAGAA	+
Preference number: 5 (lower is better) Translates to: HIPWLQADDLTLQNMDVFTRVFQ*KEALLE Trigger: TTCTAGCAGAGCCTCTTTCAACTGAAAGACACGAGT...GAACACATCCATATTCTGCAAAGTGAGGTCATCAGCTTGTAACCAGGGTATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR CAA 90 bp	GGGAGAATCAACCCTAAGAGAACACACATACCCTGGTTACAAGCTGATGACCTCGAAAAGGCTCTTGGATaGATGACTCTTTTCACTAAA	+
Preference number: 5 (lower is better) Translates to: GRINPKRTHIPWLQADDLEKALG*MTLFTK Trigger: TTTAGTGAAAAGAGTCATCAATCCAAGAGCCTTTTC...GAGGTCATCAGCTTGTAACCAGGGTATGTGTGTTCTCTTAGGGTTGATTCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102769.11
CDS-3UTR CAA 90 bp	GACCTCACTTTGCAGAATATGGATGTGTTCAGCATGCACTCCAGAATAGGAACTGTCAGGATCATTAGTTaGCTATTAGCCACTTCTGGA	+
Preference number: 5 (lower is better) Translates to: DLTLQNMDVFSMHSRIGTVRIIS*LLATSG Trigger: TCCAGAAGTGGCTAATAGCAAACTAATGATCCTGAC...AGTTCCTATTCTGGAGTGCATGCTGAACACATCCATATTCTGCAAAGTGAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102769.11