Pregenerated sensors for MMAB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029575Ensembl transcript IDs: ENSMUST00000031560.14, ENSMUST00000112245.6, ENSMUST00000123256.3
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCTGCCACCACCCGGGACAGGGAGGGCCACCTGCCTCCTGCCTTaGTGGAGAGGATACTCCGAGCTGAACCCCTGTGGACCTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SLPPPGTGRATCLLP*WRGYSELNPCGPAA Trigger: AGCTGCAGGTCCACAGGGGTTCAGCTCGGAGTATCCTCTCCATCAAGGCAGGAGGCAGGTGGCCCTCCCTGTCCCGGGTGGTGGCAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 90 bp | GTGAGGTCACTTCCTGTCTTGCTAGGCAGCTCCTGGGGCGCAGCCTaGTCTGCACTAACACCATCTGAGCCAGGATGCAGTAGAGACCAG | + |
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Preference number: 1 (lower is better) Translates to: VRSLPVLLGSSWGAA*SALTPSEPGCSRDQ Trigger: CTGGTCTCTACTGCATCCTGGCTCAGATGGTGTTAGTGCAGACCAGGCTGCGCCCCAGGAGCTGCCTAGCAAGACAGGAAGTGACCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| 3UTR CCA 90 bp | ACAGGTGTCACTGCGATGTCACTTCATAGGGAGAGGAAGCAGTGGTaGCCGGTAGAGTTACAGACAGGCCATGGTGTGGCTCACGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: TGVTAMSLHRERKQW*PVELQTGHGVAHGS Trigger: GCTTCCGTGAGCCACACCATGGCCTGTCTGTAACTCTACCGGCCACCACTGCTTCCTCTCCCTATGAAGTGACATCGCAGTGACACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 90 bp | ACTCTGTACCCAATCCGTGTCTCACTATGGTGGCTGCAATGGCATTaGACAGGACAGCCTCCTAGGGATGTTCCTCCCTGCTGGGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: TLYPIRVSLWWLQWH*TGQPPRDVPPCWAS Trigger: AGAGGCCCAGCAGGGAGGAACATCCCTAGGAGGCTGTCCTGTCCAATGCCATTGCAGCCACCATAGTGAGACACGGATTGGGTACAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 90 bp | CTCAATTCCGAGGAGCCCATCCCCTCCGTGGCCTCCAGTTTACCTTaGCTTCCCAGAATTTGGAAGTCAGCTGACATGTTCGACACAACC | + |
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Preference number: 1 (lower is better) Translates to: LNSEEPIPSVASSLP*LPRIWKSADMFDTT Trigger: GGTTGTGTCGAACATGTCAGCTGACTTCCAAATTCTGGGAAGGCAAGGTAAACTGGAGGCCACGGAGGGGATGGGCTCCTCGGAATTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 90 bp | AGCTCTTGGAACATGGCTTCCCCCGCCAGGTCTGGACCAACAGCATaGTGTTTAAGTTCCCTAAGACTGTGCCTCCTGTCTCTGGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: SSWNMASPARSGPTA*CLSSLRLCLLSLVS Trigger: TGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCATGCTGTTGGTCCAGACCTGGCGGGGGAAGCCATGTTCCAAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 90 bp | GCCAGGTCTGGACCAACAGCATGGTGTTTAAGTTCCCTAAGACTGTaGCTCCTGTCTCTGGTCTCACACACATGGCACCAACTCTGTACC | + |
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Preference number: 1 (lower is better) Translates to: ARSGPTAWCLSSLRL*LLSLVSHTWHQLCT Trigger: GGTACAGAGTTGGTGCCATGTGTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCATGCTGTTGGTCCAGACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 90 bp | ATGGCTTCACTGACCAAGTTTGTTCACCTCTGTGATGCTGATGAATaGTGTTCTAGGGGGCATCCTCCTGGGTGTGAGGTATGGGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: MASLTKFVHLCDADE*CSRGHPPGCEVWGG Trigger: GCCACCCCATACCTCACACCCAGGAGGATGCCCCCTAGAACAGCATTCATCAGCATCACAGAGGTGAACAAACTTGGTCAGTGAAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 90 bp | GCAGTGATGGGCGGCACAGAGGTGACTAAACTCCTCAAGCCTGCCTaGCTTCCCTTTATAAATGTGACATTTAAAGTCCCGTCGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: AVMGGTEVTKLLKPA*LPFINVTFKVPSAQ Trigger: CTGTGCCGACGGGACTTTAAATGTCACATTTATAAAGGGAAGGCAGGCAGGCTTGAGGAGTTTAGTCACCTCTGTGCCGCCCATCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 90 bp | TTAAGTTCCCTAAGACTGTGCCTCCTGTCTCTGGTCTCACACACATaGCACCAACTCTGTACCCAATCCGTGTCTCACTATGGTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSSLRLCLLSLVSHT*HQLCTQSVSHYGGC Trigger: GCAGCCACCATAGTGAGACACGGATTGGGTACAGAGTTGGTGCCATGTGTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR TCA 90 bp | GAAACGCACATTAACAAGAGTCGTGAAGTATCAGCTAAGGAAGACTaGGCTGAGAGATGCGACAGCAATCTGTTAGTGCCTGGCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: ETHINKSREVSAKED*AERCDSNLLVPGTA Trigger: GGCAGTGCCAGGCACTAACAGATTGCTGTCGCATCTCTCAGCTCAGTCTTCCTTAGCTGATACTTCACGACTCTTGTTAATGTGCGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 90 bp | CACACACACACACACACACAGACACACACACACAGAAAGCCCAAGTaGACAGTTCAAACCTTCCCCATGTTCATTCTCAATTCCGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTQTHTHRKPK*TVQTFPMFILNSEE Trigger: CTCCTCGGAATTGAGAATGAACATGGGGAAGGTTTGAACTGTGCACTTGGGCTTTCTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR TCA 90 bp | GAACGGGGGACATTTATCATTGGGATGTGCTACAAGTTCAGGCTCTaGAAATTACTCCATGAGAAACGCACATTAACAAGAGTCGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: ERGTFIIGMCYKFRL*KLLHEKRTLTRVVK Trigger: CTTCACGACTCTTGTTAATGTGCGTTTCTCATGGAGTAATTTTCAGAGCCTGAACTTGTAGCACATCCCAATGATAAATGTCCCCCGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR TCA 90 bp | TATCATTGGGATGTGCTACAAGTTCAGGCTCTGAAAATTACTCCATaGGAAACGCACATTAACAAGAGTCGTGAAGTATCAGCTAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: YHWDVLQVQALKITP*ETHINKSREVSAKE Trigger: TTCCTTAGCTGATACTTCACGACTCTTGTTAATGTGCGTTTCTCATGGAGTAATTTTCAGAGCCTGAACTTGTAGCACATCCCAATGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CAA 90 bp | ATCTCTGCCACCACCCGGGACAGGGAGGGCCACCTGCCTCCTGCCTaGATGGAGAGGATACTCCGAGCTGAACCCCTGTGGACCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ISATTRDREGHLPPA*MERILRAEPLWTCS Trigger: GCTGCAGGTCCACAGGGGTTCAGCTCGGAGTATCCTCTCCATCAAGGCAGGAGGCAGGTGGCCCTCCCTGTCCCGGGTGGTGGCAGAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTTGTGAGGTCACTTCCTGTCTTGCTAGGCAGCTCCTGGGGCGCAGCCTGCCTTGCTCAGAGCACTaGGCTCAACCTGGCTATGGG | + |
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Preference number: 2 (lower is better) Translates to: RCCEVTSCLARQLLGRSLPCSEH*AQPGYG Trigger: CCCATAGCCAGGTTGAGCTCAGTGCTCTGAGCAAGG...CAGGCTGCGCCCCAGGAGCTGCCTAGCAAGACAGGAAGTGACCTCACAACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| 3UTR CAA 90 bp | ACACACATAACCCCACAGCTAGGTGTTGTGAGGTCACTTCCTGTCTaGCTAGGCAGCTCCTGGGGCGCAGCCTGGTCTGCACTAACACCA | + |
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Preference number: 2 (lower is better) Translates to: THITPQLGVVRSLPV*LGSSWGAAWSALTP Trigger: TGGTGTTAGTGCAGACCAGGCTGCGCCCCAGGAGCTGCCTAGCAAGACAGGAAGTGACCTCACAACACCTAGCTGTGGGGTTATGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGATCTGGAGCTGTAGGCGGAGTGTCAGGGCCGCTTCGAGCTCTTGGAACAGAGCAAGTGTCAGGCTaGAGACCAAATCTCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: GRSGAVGGVSGPLRALGTEQVSG*RPNLCH Trigger: GTGGCAGAGATTTGGTCTTCAGCCTGACACTTGCTC...TGTTCCAAGAGCTCGAAGCGGCCCTGACACTCCGCCTACAGCTCCAGATCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR GCA 90 bp | CCGCATACCATGAGGTTCTCAGGGCGGCCTCCAGCCTCTCATAAATATCCCTCTCCCGAGTTGGCAGTGTaGTCTCTCTCTCACACACTC | + |
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Preference number: 2 (lower is better) Translates to: PHTMRFSGRPPASHKYPSPELAV*SLSHTL Trigger: GAGTGTGTGAGAGAGAGAGCACACTGCCAACTCGGG...AGAGGGATATTTATGAGAGGCTGGAGGCCGCCCTGAGAACCTCATGGTATGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGCAGCTAGCACGGAAGGCGTGCCAAGCAGGTGCACAGGGAAGAGGGCAATGCCTTCCCAGAATTTaGAAGTCAGCTGACATGTTC | + |
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Preference number: 2 (lower is better) Translates to: SGQLARKACQAGAQGRGQCLPRI*KSADMF Trigger: GAACATGTCAGCTGACTTCCAAATTCTGGGAAGGCA...TTGCCCTCTTCCCTGTGCACCTGCTTGGCACGCCTTCCGTGCTAGCTGCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGTGATGGGCGGCACAGAGGTGACTAAACTCCTCAAGCCTGCCTGCCTTGCCTCCAGTTTACCTTaGCTTCCCAGAATTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VAVMGGTEVTKLLKPACLASSLP*LPRIWK Trigger: CTTCCAAATTCTGGGAAGGCAAGGTAAACTGGAGGC...AAGGCAGGCAGGCTTGAGGAGTTTAGTCACCTCTGTGCCGCCCATCACTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTTTAAGTTCCCTAAGACTGTGCCTCCTGTCTCTGGTCTCACACACATGGGATGTTCCTCCCTGCTaGGCCTCTCCCCTTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: WCLSSLRLCLLSLVSHTWDVPPC*ASPLHR Trigger: CCTGTGAAGGGGAGAGGCCCAGCAGGGAGGAACATC...CCATGTGTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR GCA 90 bp | ACAGCATGGTGTTTAAGTTCCCTAAGACTGTGCCTCCTGTCTCTGGTCTCACACGGGCCACCTGCCTCCTaGCTTGATGGAGAGGATACT | + |
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Preference number: 2 (lower is better) Translates to: TAWCLSSLRLCLLSLVSHGPPAS*LDGEDT Trigger: AGTATCCTCTCCATCAAGGCAGGAGGCAGGTGGCCC...GTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CAA 90 bp | GGTGCTGGGGAGGAAGTAAGGGTGACATTGCAGCTGACAAGGGACTaGGAACGGGGGACATTTATCATTGGGATGTGCTACAAGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GAGEEVRVTLQLTRD*ERGTFIIGMCYKFR Trigger: CCTGAACTTGTAGCACATCCCAATGATAAATGTCCCCCGTTCCAAGTCCCTTGTCAGCTGCAATGTCACCCTTACTTCCTCCCCAGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR GCA 90 bp | AGTGTAAGTGCTTGGCTTGGGCCCTTTGGTAGCATGGCTTCACTGACCAAGTTTAGTTCCCTAAGACTGTaGCTCCTGTCTCTGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SVSAWLGPFGSMASLTKFSSLRL*LLSLVS Trigger: TGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACT...AAACTTGGTCAGTGAAGCCATGCTACCAAAGGGCCCAAGCCAAGCACTTACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR CCA 90 bp | ACAGCATGGTGTTTAAGTTCCCTAAGACTGTGCCTCCTGTCTCTGGTCTCACACCGTGTCTCACTATGGTaGCTGCAATGGCATTGGACA | + |
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Preference number: 2 (lower is better) Translates to: TAWCLSSLRLCLLSLVSHRVSLW*LQWHWT Trigger: TGTCCAATGCCATTGCAGCCACCATAGTGAGACACG...GTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCATGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR CCA 90 bp | GCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAGGAGCCATTTCTCTCTTGTCTATATTCTGGGATaGGGAGGTAACCCAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: AGILRVASSEFKRSHFSLVYILG*GGNPGH Trigger: GTGTCCTGGGTTACCTCCCCATCCCAGAATATAGAC...AAGAGAGAAATGGCTCCTTTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| 3UTR TCA 72 bp | CCACCCGGGACAGGGAGGGCCACCTGCCTCCTGCCTTaGTGGAGAGGATACTCCGAGCTGAACCCCTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: PPGTGRATCLLP*WRGYSELNPCG Trigger: TCCACAGGGGTTCAGCTCGGAGTATCCTCTCCATCAAGGCAGGAGGCAGGTGGCCCTCCCTGTCCCGGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 72 bp | GGCGGAGTGTCAGGGCCGCTTCGAGCTCTTGGAACATaGCTTCCCCCGCCAGGTCTGGACCAACAGCATGGT | + |
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Preference number: 3 (lower is better) Translates to: GGVSGPLRALGT*LPPPGLDQQHG Trigger: ACCATGCTGTTGGTCCAGACCTGGCGGGGGAAGCCATGTTCCAAGAGCTCGAAGCGGCCCTGACACTCCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR TCA 72 bp | CTCAGAGCACTGAGCTCAACCTGGCTATGGGCCGTCTaGGCACCTCAGGAAGAGACGCTGGCTGGACGGACT | + |
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Preference number: 3 (lower is better) Translates to: LRALSSTWLWAV*APQEETLAGRT Trigger: AGTCCGTCCAGCCAGCGTCTCTTCCTGAGGTGCTCAGACGGCCCATAGCCAGGTTGAGCTCAGTGCTCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| 3UTR CCA 72 bp | GCCTTGATGGAGAGGATACTCCGAGCTGAACCCCTGTaGACCTGCAGCTGTCTTTCCCCGACACTGTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ALMERILRAEPL*TCSCLSPTLWQ Trigger: CTGCCACAGTGTCGGGGAAAGACAGCTGCAGGTCCACAGGGGTTCAGCTCGGAGTATCCTCTCCATCAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 72 bp | CTTCCTGTCTTGCTAGGCAGCTCCTGGGGCGCAGCCTaGTCTGCACTAACACCATCTGAGCCAGGATGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LPVLLGSSWGAA*SALTPSEPGCS Trigger: ACTGCATCCTGGCTCAGATGGTGTTAGTGCAGACCAGGCTGCGCCCCAGGAGCTGCCTAGCAAGACAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| 3UTR TCA 72 bp | CGTGCCAAGCAGGTGCACAGGGAAGAGGGCAATAGCTaGGCAGAGTCTAGGGTGTCTCAGATCTGCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: RAKQVHREEGNS*AESRVSQICPS Trigger: GGAAGGGCAGATCTGAGACACCCTAGACTCTGCTCAGCTATTGCCCTCTTCCCTGTGCACCTGCTTGGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR TCA 72 bp | GAAGCTAGGCAATGCCTGGAGCCTGAAGGTGGGGATTaGCCTTTCGAGTGCCACTCAACATCCGACCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: EARQCLEPEGGD*PFECHSTSDLG Trigger: GCCCAGGTCGGATGTTGAGTGGCACTCGAAAGGTCAATCCCCACCTTCAGGCTCCAGGCATTGCCTAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 72 bp | ATCAGGGCAGCTAGCACGGAAGGCGTGCCAAGCAGGTaGACAGGGAAGAGGGCAATAGCTGAGCAGAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: IRAASTEGVPSR*TGKRAIAEQSL Trigger: TAGACTCTGCTCAGCTATTGCCCTCTTCCCTGTGCACCTGCTTGGCACGCCTTCCGTGCTAGCTGCCCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 72 bp | GCCGCGGCCCAGGTTGTGATTAAAACAACTGTCAAGTaGCAGTGGGCGGTGTGTGTGTGTGAGGCCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: AAAQVVIKTTVK*QWAVCVCEATV Trigger: GACTGTGGCCTCACACACACACACCGCCCACTGGCACTTGACAGTTGTTTTAATCACAACCTGGGCCGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 72 bp | GCAGCCTGGTCTGCACTAACACCATCTGAGCCAGGATaGAGTAGAGACCAGAAGCATGGCTGTGGGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: AAWSALTPSEPG*SRDQKHGCGAA Trigger: TGCTGCCCCACAGCCATGCTTCTGGTCTCTACTGCATCCTGGCTCAGATGGTGTTAGTGCAGACCAGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| 3UTR CCA 72 bp | CCCAGTGAGGCTCAGGTGAGGTCCAGTGTAAGTGCTTaGCTTGGGCCCTTTGGTAGCATGGCTTCACTGACC | + |
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Preference number: 3 (lower is better) Translates to: PSEAQVRSSVSA*LGPFGSMASLT Trigger: GGTCAGTGAAGCCATGCTACCAAAGGGCCCAAGCCAAGCACTTACACTGGACCTCACCTGAGCCTCACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 72 bp | GGCTGTGGGGCAGCAGAGAGCAGGGCAATGCACTCCTaGAGTAGTAACCTTGCTCAGAGCACTGAGCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: GCGAAESRAMHS*SSNLAQSTELN Trigger: GTTGAGCTCAGTGCTCTGAGCAAGGTTACTACTCCAGGAGTGCATTGCCCTGCTCTCTGCTGCCCCACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| 3UTR CCA 72 bp | CCAATCCGTGTCTCACTATGGTGGCTGCAATGGCATTaGACAGGACAGCCTCCTAGGGATGTTCCTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: PIRVSLWWLQWH*TGQPPRDVPPC Trigger: GCAGGGAGGAACATCCCTAGGAGGCTGTCCTGTCCAATGCCATTGCAGCCACCATAGTGAGACACGGATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR GCA 72 bp | GAGGAGCCCATCCCCTCCGTGGCCTCCAGTTTACCTTaGCTTCCCAGAATTTGGAAGTCAGCTGACATGTTC | + |
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Preference number: 3 (lower is better) Translates to: EEPIPSVASSLP*LPRIWKSADMF Trigger: GAACATGTCAGCTGACTTCCAAATTCTGGGAAGGCAAGGTAAACTGGAGGCCACGGAGGGGATGGGCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 72 bp | ACTGCGATGTCACTTCATAGGGAGAGGAAGCAGTGGTaGCCGGTAGAGTTACAGACAGGCCATGGTGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TAMSLHRERKQW*PVELQTGHGVA Trigger: AGCCACACCATGGCCTGTCTGTAACTCTACCGGCCACCACTGCTTCCTCTCCCTATGAAGTGACATCGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 72 bp | GTCACTGCGATGTCACTTCATAGGGAGAGGAAGCAGTaGTGGCCGGTAGAGTTACAGACAGGCCATGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VTAMSLHRERKQ*WPVELQTGHGV Trigger: CACACCATGGCCTGTCTGTAACTCTACCGGCCACCACTGCTTCCTCTCCCTATGAAGTGACATCGCAGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 72 bp | GCACCAACTCTGTACCCAATCCGTGTCTCACTATGGTaGCTGCAATGGCATTGGACAGGACAGCCTCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: APTLYPIRVSLW*LQWHWTGQPPR Trigger: CCTAGGAGGCTGTCCTGTCCAATGCCATTGCAGCCACCATAGTGAGACACGGATTGGGTACAGAGTTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR TCA 72 bp | GTCTCAGATCTGCCCTTCCTAAGTCACCGCATACCATaGGGTTCTCAGGGCGGCCTCCAGCCTCTCATAAAT | + |
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Preference number: 3 (lower is better) Translates to: VSDLPFLSHRIP*GSQGGLQPLIN Trigger: ATTTATGAGAGGCTGGAGGCCGCCCTGAGAACCTCATGGTATGCGGTGACTTAGGAAGGGCAGATCTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 72 bp | ATGGCACCAACTCTGTACCCAATCCGTGTCTCACTATaGTGGCTGCAATGGCATTGGACAGGACAGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: MAPTLYPIRVSL*WLQWHWTGQPP Trigger: AGGAGGCTGTCCTGTCCAATGCCATTGCAGCCACCATAGTGAGACACGGATTGGGTACAGAGTTGGTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CCA 72 bp | TGTTCATTCTCAATTCCGAGGAGCCCATCCCCTCCGTaGCCTCCAGTTTACCTTGCCTTCCCAGAATTTGGA | + |
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Preference number: 3 (lower is better) Translates to: CSFSIPRSPSPP*PPVYLAFPEFG Trigger: TCCAAATTCTGGGAAGGCAAGGTAAACTGGAGGCCACGGAGGGGATGGGCTCCTCGGAATTGAGAATGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR-3UTR CAA 90 bp | AGTGTAAGTGCTTGGCTTGGGCCCTTTGGTAGCATGGCTTCACTGACCAAGTTTCTTGAACAGCCCGAGTaGGCAGTGTGCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SVSAWLGPFGSMASLTKFLEQPE*AVCSLS Trigger: AGAGAGAGAGCACACTGCCAACTCGGGCTGTTCAAG...AAACTTGGTCAGTGAAGCCATGCTACCAAAGGGCCCAAGCCAAGCACTTACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR TCA 72 bp | TACATTTCCAGAGGCCTCTGGTACATTCCAAGTCCTTaGACAGCCCGAGTTGGCAGTGTGCTCTCTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: YISRGLWYIPSP*TARVGSVLSLS Trigger: TGAGAGAGAGAGCACACTGCCAACTCGGGCTGTTCAAGGACTTGGAATGTACCAGAGGCCTCTGGAAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR GCA 72 bp | GGACCAACAGCATGGTGTTTAAGTTCCCTAAGACTGTaGCTCCTGTCTCTGGTCTCACACACATGGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: GPTAWCLSSLRL*LLSLVSHTWHQ Trigger: TTGGTGCCATGTGTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCATGCTGTTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR GCA 72 bp | CTGACCAAGTTTGTTCACCTCTGTGATGCTGATGAATaGTGTTCTAGGGGGCATCCTCCTGGGTGTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LTKFVHLCDADE*CSRGHPPGCEV Trigger: TACCTCACACCCAGGAGGATGCCCCCTAGAACAGCATTCATCAGCATCACAGAGGTGAACAAACTTGGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR CCA 72 bp | TCCGTGGCCTCCAGTTTACCTTGCCTTCCCAGAATTTaGAAGTCAGCTGACATGTTCGACACAACCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVASSLPCLPRI*KSADMFDTTWR Trigger: TCTCCAGGTTGTGTCGAACATGTCAGCTGACTTCCAAATTCTGGGAAGGCAAGGTAAACTGGAGGCCACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR CCA 72 bp | CTAAGACTGTGCCTCCTGTCTCTGGTCTCACACACATaGCACCAACTCTGTACCCAATCCGTGTCTCACTAT | + |
|
Preference number: 3 (lower is better) Translates to: LRLCLLSLVSHT*HQLCTQSVSHY Trigger: ATAGTGAGACACGGATTGGGTACAGAGTTGGTGCCATGTGTGTGAGACCAGAGACAGGAGGCACAGTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCATGGTGTTTAAGTTCCCTAAGACTGTGCCTCCTGTCTCTGGTCTCACACGGCCTCCAGTTTACCTaGCCTTCCCAGAATTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TAWCLSSLRLCLLSLVSHGLQFT*PSQNLE Trigger: TTCCAAATTCTGGGAAGGCAAGGTAAACTGGAGGCC...GTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCATGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR TCA 72 bp | CAGTTTACCTTGCCTTCCCAGAATTTGGAAGTCAGCTaGCATGTTCGACACAACCTGGAGAAGCCAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QFTLPSQNLEVS*HVRHNLEKPGV Trigger: GACTCCTGGCTTCTCCAGGTTGTGTCGAACATGTCAGCTGACTTCCAAATTCTGGGAAGGCAAGGTAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR TCA 72 bp | GTGCTTGGCTTGGGCCCTTTGGTAGCATGGCTTCACTaGCCAAGTTTGTTCACCTCTGTGATGCTGATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VLGLGPLVAWLH*PSLFTSVMLMN Trigger: ATTCATCAGCATCACAGAGGTGAACAAACTTGGTCAGTGAAGCCATGCTACCAAAGGGCCCAAGCCAAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR GCA 72 bp | ACACACACACAGACACACACACACAGAAAGCCCAAGTaGACAGTTCAAACCTTCCCCATGTTCATTCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: THTQTHTHRKPK*TVQTFPMFILN Trigger: ATTGAGAATGAACATGGGGAAGGTTTGAACTGTGCACTTGGGCTTTCTGTGTGTGTGTGTCTGTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR CCA 72 bp | AGAGACCGAGAGACAGACAGAGAGATCAATGGTGAATaGGTACAATGTAAAGGCGGCTTTTGCAGCTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RDRETDREINGE*VQCKGGFCSLL Trigger: TAACAAGCTGCAAAAGCCGCCTTTACATTGTACCCATTCACCATTGATCTCTCTGTCTGTCTCTCGGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR CCA 72 bp | GCTGACAAGGGACTTGGAACGGGGGACATTTATCATTaGGATGTGCTACAAGTTCAGGCTCTGAAAATTACT | + |
|
Preference number: 3 (lower is better) Translates to: ADKGLGTGDIYH*DVLQVQALKIT Trigger: AGTAATTTTCAGAGCCTGAACTTGTAGCACATCCCAATGATAAATGTCCCCCGTTCCAAGTCCCTTGTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| 3UTR CAA 72 bp | ACCACCCGGGACAGGGAGGGCCACCTGCCTCCTGCCTaGATGGAGAGGATACTCCGAGCTGAACCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTRDREGHLPPA*MERILRAEPLW Trigger: CCACAGGGGTTCAGCTCGGAGTATCCTCTCCATCAAGGCAGGAGGCAGGTGGCCCTCCCTGTCCCGGGTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR TCA 90 bp | TGTAGCCAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCGTCTTCCCCGCCCTaGGGGCCACGGCTCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSQPPLPLSARLSGVDLSPSSPP*GPRLWK Trigger: TTTCCAGAGCCGTGGCCCTCAGGGCGGGGAAGACGG...CGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTGGCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR CCA 90 bp | AGGTGTTGTGAGGTCACTTCCTGTCTTGCTAGGCAGCTCCTGGGGCGCAGCCTGATGAAGGGAGGGGCCTaGTGGTCAGACAGACCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCCEVTSCLARQLLGRSLMKGGA*WSDRPA Trigger: GGCGGGTCTGTCTGACCACCAGGCCCCTCCCTTCAT...CAGGCTGCGCCCCAGGAGCTGCCTAGCAAGACAGGAAGTGACCTCACAACACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| 3UTR CAA 72 bp | ACCCCACAGCTAGGTGTTGTGAGGTCACTTCCTGTCTaGCTAGGCAGCTCCTGGGGCGCAGCCTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPQLGVVRSLPV*LGSSWGAAWSA Trigger: TGCAGACCAGGCTGCGCCCCAGGAGCTGCCTAGCAAGACAGGAAGTGACCTCACAACACCTAGCTGTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR TCA 90 bp | CACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGTGCAAATTCATGCCGTCTTCCCCGCCCTaGGGGCCACGGCTCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSQHDCLELTSRPLCKFMPSSPP*GPRLWK Trigger: TTTCCAGAGCCGTGGCCCTCAGGGCGGGGAAGACGG...CATGAATTTGCACAGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGCAGAGAGCAGGGCAATGCACTCCTGGAGTAGTAACCTTGCTCAGAGCAGTGCAGGGCAGAGCTaGTCTTGCCTCCAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAAESRAMHSWSSNLAQSSAGQS*SCLQKA Trigger: TGCCTTCTGGAGGCAAGAGCAGCTCTGCCCTGCACT...GCTCTGAGCAAGGTTACTACTCCAGGAGTGCATTGCCCTGCTCTCTGCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR CCA 90 bp | CATTGGACAGGACAGCCTCCTAGGGATGTTCCTCCCTGCTGGGCCTCTCCCCTTTTAAGTGAGCCTCCCTaGCTGAGGAACGTGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HWTGQPPRDVPPCWASPLLSEPP*LRNVEW Trigger: CCACTCCACGTTCCTCAGCCAGGGAGGCTCACTTAA...AAGGGGAGAGGCCCAGCAGGGAGGAACATCCCTAGGAGGCTGTCCTGTCCAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGAGTCAGCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAGGAGCCCGTCTTCCCCGCCCTaGGGGCCACGGCTCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVESAGILRVASSEFKRSPSSPP*GPRLWK Trigger: TTTCCAGAGCCGTGGCCCTCAGGGCGGGGAAGACGG...GCTCCTTTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGCTGACTCTACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR CCA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTAAATCTTGGGGATCTTaGCTGCCGTCGAGGACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLPLSARLSGVDLSPTKSWGS*LPSRTA Trigger: AGCCGTCCTCGACGGCAGCCAAGATCCCCAAGATTT...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAGAGAGCAGGGCAATGCACTCCTGGAGTAGTAACCTTGCTCAGAGCTTAAGTGAGCCTCCCTaGCTGAGGAACGTGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAAESRAMHSWSSNLAQSLSEPP*LRNVEW Trigger: CCACTCCACGTTCCTCAGCCAGGGAGGCTCACTTAA...GCTCTGAGCAAGGTTACTACTCCAGGAGTGCATTGCCCTGCTCTCTGCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTGATGGGCGGCACAGAGGTGACTAAACTCCTCAAGCCTGCCTGCCTTGGCTGCCCTCCTTCATaGCTGCATATCTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VAVMGGTEVTKLLKPACLGCPPS*LHIWLQ Trigger: CTGTAGCCAGATATGCAGCCATGAAGGAGGGCAGCC...AAGGCAGGCAGGCTTGAGGAGTTTAGTCACCTCTGTGCCGCCCATCACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR CCA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGGCTGCCCTCCTTCATaGCTGCATATCTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QPPLPLSARLSGVDLSPTGCPPS*LHIWLQ Trigger: CTGTAGCCAGATATGCAGCCATGAAGGAGGGCAGCC...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR TCA 90 bp | GCCAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCAGTCTCCTTTCTCCTGTaGAGGTGCTGGAAAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANPHFHSQHDCLELTSRPVSFLL*RCWKTL Trigger: AAGGGTTTTCCAGCACCTTCACAGGAGAAAGGAGAC...TGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR TCA 90 bp | ACACACACAGACACACACACACAGAAAGCCCAAGTGCACAGTTCAAACCTTCCCGTGAGCCTCCCTGGCTaGGGAACGTGGAGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTQKAQVHSSNLPVSLPG*GTWSGQ Trigger: CTGGCCACTCCACGTTCCTCAGCCAGGGAGGCTCAC...GGGAAGGTTTGAACTGTGCACTTGGGCTTTCTGTGTGTGTGTGTCTGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR GCA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGAACTTCGCCACGTTTaGATCCGTCTCTCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPPLPLSARLSGVDLSPTELRHV*IRLSHL Trigger: CAGATGGGAGAGACGGATGCAAACGTGGCGAAGTTC...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR GCA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGGGCAGAGCTGCTCTTaGCTCCAGATTTCTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLPLSARLSGVDLSPTGQSCS*LQISEA Trigger: AGCTTCAGAAATCTGGAGGCAAGAGCAGCTCTGCCC...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112245.6 |
||
| CDS-3UTR GCA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTAGTGCAGGGCAGAGCTaGTCTTGCCTCCAGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLPLSARLSGVDLSPTSAGQS*SCLQIS Trigger: AGAAATCTGGAGGCAAGAGCAGCTCTGCCCTGCACT...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112245.6 |
||
| CDS-3UTR CCA 90 bp | GCCAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCAAGCTTAGCTCATCCGTaGTCCCCACGGCTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ANPHFHSQHDCLELTSRPSLAHP*SPRLQI Trigger: TATTTGAAGCCGTGGGGACCACGGATGAGCTAAGCT...TGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| 3UTR CAA 72 bp | CAGAGAGCAGGGCAATGCACTCCTGGAGTAGTAACCTaGCTCAGAGCACTGAGCTCAACCTGGCTATGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRAGQCTPGVVT*LRALSSTWLWA Trigger: GGCCCATAGCCAGGTTGAGCTCAGTGCTCTGAGCAAGGTTACTACTCCAGGAGTGCATTGCCCTGCTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR TCA 90 bp | CACAACACTGTAGAGTCAGCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAGTGAGCCTCCCTGGCTaGGGAACGTGGAGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HNTVESAGILRVASSEFKVSLPG*GTWSGQ Trigger: CTGGCCACTCCACGTTCCTCAGCCAGGGAGGCTCAC...TTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGCTGACTCTACAGTGTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR GCA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGCCCTCCTTCATGGCTaGATATCTGGCTACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPPLPLSARLSGVDLSPTALLHG*ISGYSE Trigger: TTCACTGTAGCCAGATATGCAGCCATGAAGGAGGGC...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR GCA 90 bp | AACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGGCCCTCCTTCATGGCTaGATATCTGGCTACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPHFHSQHDCLELTSRPLALLHG*ISGYSE Trigger: TTCACTGTAGCCAGATATGCAGCCATGAAGGAGGGC...CAGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGAGTCAGCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAGGAGCAAGGGAGGGGCCTGGTaGTCAGACAGACCCGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVESAGILRVASSEFKRSKGGAW*SDRPAT Trigger: TGTGGCGGGTCTGTCTGACCACCAGGCCCCTCCCTT...GCTCCTTTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGCTGACTCTACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR GCA 90 bp | CCGCATACCATGAGGTTCTCAGGGCGGCCTCCAGCCTCTCATAAATATCCCTCTGAACTTCGCCACGTTTaGATCCGTCTCTCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHTMRFSGRPPASHKYPSELRHV*IRLSHL Trigger: CAGATGGGAGAGACGGATGCAAACGTGGCGAAGTTC...AGAGGGATATTTATGAGAGGCTGGAGGCCGCCCTGAGAACCTCATGGTATGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR CCA 90 bp | CACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGTGCAAATTCATGAAATCTTGGGGATCTTaGCTGCCGTCGAGGACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSQHDCLELTSRPLCKFMKSWGS*LPSRTA Trigger: AGCCGTCCTCGACGGCAGCCAAGATCCCCAAGATTT...CATGAATTTGCACAGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR TCA 90 bp | ACAGCATGGTGTTTAAGTTCCCTAAGACTGTGCCTCCTGTCTCTGGTCTCACACGCCGTGTGCTTTAAGTaGGCCTCCCTGGCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TAWCLSSLRLCLLSLVSHAVCFK*ASLAEE Trigger: TTCCTCAGCCAGGGAGGCTCACTTAAAGCACACGGC...GTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGAGTCAGCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAGGAGCGCCGTGTGCTTTAAGTaGGCCTCCCTGGCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVESAGILRVASSEFKRSAVCFK*ASLAEE Trigger: TTCCTCAGCCAGGGAGGCTCACTTAAAGCACACGGC...GCTCCTTTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGCTGACTCTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR GCA 90 bp | ACACACACAGACACACACACACAGAAAGCCCAAGTGCACAGTTCAAACCTTCCCAGTGCAGGGCAGAGCTaGTCTTGCCTCCAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: THTDTHTQKAQVHSSNLPSAGQS*SCLQKA Trigger: TGCCTTCTGGAGGCAAGAGCAGCTCTGCCCTGCACT...GGGAAGGTTTGAACTGTGCACTTGGGCTTTCTGTGTGTGTGTGTCTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR GCA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTATATTTTCTCTTGGCTaGCCTCCTTCATGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLPLSARLSGVDLSPTIFSLG*PPSWLH Trigger: ATGCAGCCATGAAGGAGGGCAGCCAAGAGAAAATAT...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR CCA 90 bp | AACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGCTTTGTCTCCCGTCTTaGTGTAAATCTTGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NPHFHSQHDCLELTSRPLLCLPS*CKSWGS Trigger: AGATCCCCAAGATTTACACCAAGACGGGAGACAAAG...CAGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAGAGAGCAGGGCAATGCACTCCTGGAGTAGTAACCTTGCTCAGAGCCTTTGTCTCCCGTCTTaGTGTAAATCTTGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GAAESRAMHSWSSNLAQSLCLPS*CKSWGS Trigger: AGATCCCCAAGATTTACACCAAGACGGGAGACAAAG...GCTCTGAGCAAGGTTACTACTCCAGGAGTGCATTGCCCTGCTCTCTGCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS-3UTR CCA 90 bp | GCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAGGAGCCATTTCTCTCTTAGCCTGACTTCAGAGTaGGACAGGGCCACTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGILRVASSEFKRSHFSLSLTSE*DRATGD Trigger: GTCCCCAGTGGCCCTGTCCCACTCTGAAGTCAGGCT...AAGAGAGAAATGGCTCCTTTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| 3UTR CAA 72 bp | GTACATTTCCAGAGGCCTCTGGTACATTCCAAGTCCTaGAACAGCCCGAGTTGGCAGTGTGCTCTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHFQRPLVHSKS*NSPSWQCALSL Trigger: GAGAGAGAGAGCACACTGCCAACTCGGGCTGTTCAAGGACTTGGAATGTACCAGAGGCCTCTGGAAATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR CCA 90 bp | ACCATGAGGTTCTCAGGGCGGCCTCCAGCCTCTCATAAATATCCCTCTTCCCAATCTTGGTGTAAATCTTaGGGATCTTGGCTGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TMRFSGRPPASHKYPSSQSWCKS*GSWLPS Trigger: CGACGGCAGCCAAGATCCCCAAGATTTACACCAAGA...TTGGGAAGAGGGATATTTATGAGAGGCTGGAGGCCGCCCTGAGAACCTCATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR CCA 90 bp | CACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGTGCAAATTCATGTCTTGGTGTAAATCTTaGGGATCTTGGCTGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HSQHDCLELTSRPLCKFMSWCKS*GSWLPS Trigger: CGACGGCAGCCAAGATCCCCAAGATTTACACCAAGA...CATGAATTTGCACAGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
||
| CDS-3UTR CCA 90 bp | TGTAGCCAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCTTTGTCTCCCGTCTTaGTGTAAATCTTGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSQPPLPLSARLSGVDLSLCLPS*CKSWGS Trigger: AGATCCCCAAGATTTACACCAAGACGGGAGACAAAG...CGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTGGCTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
||
| CDS-3UTR TCA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTACGGCTTCAAATACTTaGTCATCTTTAGGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPPLPLSARLSGVDLSPTTASNT*SSLGLL Trigger: AAGGAGACCTAAAGATGATCAAGTATTTGAAGCCGT...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
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| CDS-3UTR TCA 90 bp | ACTGTAGAGTCAGCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAGGAGCTTCCTAAACAGAGCCTaGCTTCAGAGTGGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVESAGILRVASSEFKRSFLNRA*LQSGTG Trigger: CCCTGTCCCACTCTGAAGTCAGGCTCTGTTTAGGAA...GCTCCTTTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGCTGACTCTACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR GCA 90 bp | ACTGTAGAGTCAGCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAGGAGCGAACTTCGCCACGTTTaGATCCGTCTCTCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVESAGILRVASSEFKRSELRHV*IRLSHL Trigger: CAGATGGGAGAGACGGATGCAAACGTGGCGAAGTTC...GCTCCTTTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGCTGACTCTACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR CCA 90 bp | CACAACACTGTAGAGTCAGCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAAATCTTGGGGATCTTaGCTGCCGTCGAGGACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HNTVESAGILRVASSEFKKSWGS*LPSRTA Trigger: AGCCGTCCTCGACGGCAGCCAAGATCCCCAAGATTT...TTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGCTGACTCTACAGTGTTGTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR CCA 90 bp | TTGCCTCTTCTGAGTTTAAAAGGAGCCATTTCTCTCTTGACCTGGGTGACATTCGTGGGACAGGGCCACTaGGGACACAGCACAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSLKGAISLLTWVTFVGQGH*GHSTVQ Trigger: TTGGACTGTGCTGTGTCCCCAGTGGCCCTGTCCCAC...GAATGTCACCCAGGTCAAGAGAGAAATGGCTCCTTTTAAACTCAGAAGAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR TCA 90 bp | AGTGTAAGTGCTTGGCTTGGGCCCTTTGGTAGCATGGCTTCACTGACCAAGTTTGTCTCCTTTCTCCTGTaGAGGTGCTGGAAAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSAWLGPFGSMASLTKFVSFLL*RCWKTL Trigger: AAGGGTTTTCCAGCACCTTCACAGGAGAAAGGAGAC...AAACTTGGTCAGTGAAGCCATGCTACCAAAGGGCCCAAGCCAAGCACTTACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CAA 72 bp | GAGGAAGTAAGGGTGACATTGCAGCTGACAAGGGACTaGGAACGGGGGACATTTATCATTGGGATGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EEVRVTLQLTRD*ERGTFIIGMCY Trigger: GTAGCACATCCCAATGATAAATGTCCCCCGTTCCAAGTCCCTTGTCAGCTGCAATGTCACCCTTACTTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| CDS-3UTR GCA 90 bp | AAGTCACCGCATACCATGAGGTTCTCAGGGCGGCCTCCAGCCTCTCATAAATATATATTTTCTCTTGGCTaGCCTCCTTCATGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSPHTMRFSGRPPASHKYIFSLG*PPSWLH Trigger: ATGCAGCCATGAAGGAGGGCAGCCAAGAGAAAATAT...ATATTTATGAGAGGCTGGAGGCCGCCCTGAGAACCTCATGGTATGCGGTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| CDS-3UTR CCA 90 bp | GCGGGTATCCTCAGGGTTGCCTCTTCTGAGTTTAAAAGGAGCCATTTCTCTCTTAGCTTAGCTCATCCGTaGTCCCCACGGCTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: AGILRVASSEFKRSHFSLSLAHP*SPRLQI Trigger: TATTTGAAGCCGTGGGGACCACGGATGAGCTAAGCT...AAGAGAGAAATGGCTCCTTTTAAACTCAGAAGAGGCAACCCTGAGGATACCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR TCA 90 bp | CTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGTGCAAATTCATGCTACGGCTTCAAATACTTaGTCATCTTTAGGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSARLSGVDLSPTVQIHATASNT*SSLGLL Trigger: AAGGAGACCTAAAGATGATCAAGTATTTGAAGCCGT...AGCATGAATTTGCACAGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
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| 3UTR CAA 72 bp | GGTGAATGGGTACAATGTAAAGGCGGCTTTTGCAGCTaGTTAGCTCGCAGTGAGACTCACTGTATGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEWVQCKGGFCS*LARSETHCMTV Trigger: TACAGTCATACAGTGAGTCTCACTGCGAGCTAACAAGCTGCAAAAGCCGCCTTTACATTGTACCCATTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| 3UTR CAA 72 bp | TTGCCTCTTCTGAGTTTAAAAGGAGCCATTTCTCTCTaGACCTGGGTGACATTCCACCCAGAAGGAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSLKGAISL*TWVTFHPEGRI Trigger: AATCCTTCCTTCTGGGTGGAATGTCACCCAGGTCAAGAGAGAAATGGCTCCTTTTAAACTCAGAAGAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR TCA 90 bp | TTGCCTCTTCTGAGTTTAAAAGGAGCCATTTCTCTCTTGACCTGGGTGACATTCACGGCTTCAAATACTTaGTCATCTTTAGGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLSLKGAISLLTWVTFTASNT*SSLGLL Trigger: AAGGAGACCTAAAGATGATCAAGTATTTGAAGCCGT...GAATGTCACCCAGGTCAAGAGAGAAATGGCTCCTTTTAAACTCAGAAGAGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS TCA 90 bp | TCCAGCTCCAGGACAGGCCCTTCCTGGAAGGCCGTGTGCTTTAAGTaGGCCTCCCTGGCTGAGGAACGTGGAGTGGCCAGGGCGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSRTGPSWKAVCFK*ASLAEERGVARAEP Trigger: CGGCTCCGCCCTGGCCACTCCACGTTCCTCAGCCAGGGAGGCTCACTTAAAGCACACGGCCTTCCAGGAAGGGCCTGTCCTGGAGCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000123256.3 |
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| CDS GCA 90 bp | GGCACCACACGTCTCTCGGCACGACGGCATACAGCGCGGCAGAAGTaGAGGGCAGAGCTGCTCTTGCCTCCAGAAGGCAGAATGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTTRLSARRHTARQK*RAELLLPPEGRMKA Trigger: GGCCTTCATTCTGCCTTCTGGAGGCAAGAGCAGCTCTGCCCTGCACTTCTGCCGCGCTGTATGCCGTCGTGCCGAGAGACGTGTGGTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000123256.3 |
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| CDS CCA 90 bp | AGGCCGTGTGCTTTAAGTGAGCCTCCCTGGCTGAGGAACGTGGAGTaGCCAGGGCGGAGCCGACGTCCTGTAGCATGCACTGGATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPCALSEPPWLRNVE*PGRSRRPVACTGFS Trigger: AGAAAATCCAGTGCATGCTACAGGACGTCGGCTCCGCCCTGGCCACTCCACGTTCCTCAGCCAGGGAGGCTCACTTAAAGCACACGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000123256.3 |
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| CDS-3UTR CAA 90 bp | AACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTGAGGGCAGAGCTGCTCTaGCCTCCAGAAGGCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: NPHFHSQHDCLELTSRPLRAELL*PPEGRM Trigger: CATTCTGCCTTCTGGAGGCAAGAGCAGCTCTGCCCT...CAGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| CDS-3UTR CAA 90 bp | CCTGGAGTAGTAACCTTGCTCAGAGCACTGAGCTCAACCTGGCTATGGGCCGTCAGGGCAGAGCTGCTCTaGCCTCCAGAAGGCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PGVVTLLRALSSTWLWAVRAELL*PPEGRM Trigger: CATTCTGCCTTCTGGAGGCAAGAGCAGCTCTGCCCT...GACGGCCCATAGCCAGGTTGAGCTCAGTGCTCTGAGCAAGGTTACTACTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR CAA 90 bp | GCCAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCAAGAACTTCGCCACGTTaGCATCCGTCTCTCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: ANPHFHSQHDCLELTSRPRTSPR*HPSLPS Trigger: AGATGGGAGAGACGGATGCAAACGTGGCGAAGTTCT...TGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
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| CDS CCA 90 bp | AGCCTGTTTAAGAACTTCGCCACGTTTGCATCCGTCTCTCCCATCTaGACAAGAGGCACCACACGTCTCTCGGCACGACGGCATACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLFKNFATFASVSPI*TRGTTRLSARRHTA Trigger: CGCTGTATGCCGTCGTGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACGGATGCAAACGTGGCGAAGTTCTTAAACAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
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| CDS CCA 90 bp | CACCTGTTTAAGAACTTCGCCACGTTTGCATCCGTCTCTCCCATCTaGACAAGAGGCACCACACGTCTCTCGGCACGACGGCATACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HLFKNFATFASVSPI*TRGTTRLSARRHTA Trigger: CGCTGTATGCCGTCGTGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACGGATGCAAACGTGGCGAAGTTCTTAAACAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS TCA 90 bp | GCGCGGCAGAAGTGCAGGGCAGAGCTGCTCTTGCCTCCAGATTTCTaGAGCTCTTCGGCAAACATGTGGCCTTTTTCTGTGACCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARQKCRAELLLPPDF*SSSANMWPFSVTNS Trigger: GGAGTTGGTCACAGAAAAAGGCCACATGTTTGCCGAAGAGCTTCAGAAATCTGGAGGCAAGAGCAGCTCTGCCCTGCACTTCTGCCGCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112245.6 |
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| CDS-3UTR CAA 90 bp | GGTGTCACTGCGATGTCACTTCATAGGGAGAGGAAGCAGTGGTGGCCGGTAGAGAGAACTTCGCCACGTTaGCATCCGTCTCTCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GVTAMSLHRERKQWWPVERTSPR*HPSLPS Trigger: AGATGGGAGAGACGGATGCAAACGTGGCGAAGTTCT...CTCTACCGGCCACCACTGCTTCCTCTCCCTATGAAGTGACATCGCAGTGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| CDS-3UTR CAA 90 bp | GCCAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTTGTATATTTTCTCTaGGCTGCCCTCCTTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ANPHFHSQHDCLELTSRPLVYFL*AALLHG Trigger: GCCATGAAGGAGGGCAGCCAAGAGAAAATATACAAG...TGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
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| CDS-3UTR CAA 90 bp | TGTAGCCAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCTTGTATATTTTCTCTaGGCTGCCCTCCTTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSQPPLPLSARLSGVDLSLVYFL*AALLHG Trigger: GCCATGAAGGAGGGCAGCCAAGAGAAAATATACAAG...CGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTGGCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| CDS CCA 90 bp | TGCCTGCGCTGGCTCTTATTTCCTAAACAGAGCCTGACTTCAGAGTaGGACAGGGCCACTGGGGACACAGCACAGTCCAATATACATGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLRWLLFPKQSLTSE*DRATGDTAQSNIHD Trigger: ATCATGTATATTGGACTGTGCTGTGTCCCCAGTGGCCCTGTCCCACTCTGAAGTCAGGCTCTGTTTAGGAAATAAGAGCCAGCGCAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR CAA 90 bp | CAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACTCACGGCTTCAAATACTaGATCATCTTTAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPPLPLSARLSGVDLSPTHGFKY*IIFRSP Trigger: AGGAGACCTAAAGATGATCAAGTATTTGAAGCCGTG...AGTGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
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| CDS-3UTR CAA 90 bp | CCTGGAGTAGTAACCTTGCTCAGAGCACTGAGCTCAACCTGGCTATGGGCCGTCCACGGCTTCAAATACTaGATCATCTTTAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGVVTLLRALSSTWLWAVHGFKY*IIFRSP Trigger: AGGAGACCTAAAGATGATCAAGTATTTGAAGCCGTG...GACGGCCCATAGCCAGGTTGAGCTCAGTGCTCTGAGCAAGGTTACTACTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR CAA 90 bp | GCCAACCCCCACTTCCACTCTCAGCACGACTGTCTGGAGTTGACCTCTCGCCCACACACATCATGTTTCTaGTATATTTTCTCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANPHFHSQHDCLELTSRPHTSCF*YIFSWL Trigger: CAGCCAAGAGAAAATATACAAGAAACATGATGTGTG...TGGGCGAGAGGTCAACTCCAGACAGTCGTGCTGAGAGTGGAAGTGGGGGTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 |
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| CDS-3UTR CAA 90 bp | AGGGTTGCCTCTTCTGAGTTTAAAAGGAGCCATTTCTCTCTTGACCTGGGTGACAGAACTTCGCCACGTTaGCATCCGTCTCTCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RVASSEFKRSHFSLDLGDRTSPR*HPSLPS Trigger: AGATGGGAGAGACGGATGCAAACGTGGCGAAGTTCT...GTCACCCAGGTCAAGAGAGAAATGGCTCCTTTTAAACTCAGAAGAGGCAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS-3UTR CAA 90 bp | CCGCATACCATGAGGTTCTCAGGGCGGCCTCCAGCCTCTCATAAATATCCCTCTCACACATCATGTTTCTaGTATATTTTCTCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PHTMRFSGRPPASHKYPSHTSCF*YIFSWL Trigger: CAGCCAAGAGAAAATATACAAGAAACATGATGTGTG...AGAGGGATATTTATGAGAGGCTGGAGGCCGCCCTGAGAACCTCATGGTATGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| CDS-3UTR CAA 90 bp | ACAGCATGGTGTTTAAGTTCCCTAAGACTGTGCCTCCTGTCTCTGGTCTCACACCACGGCTTCAAATACTaGATCATCTTTAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TAWCLSSLRLCLLSLVSHHGFKY*IIFRSP Trigger: AGGAGACCTAAAGATGATCAAGTATTTGAAGCCGTG...GTGTGAGACCAGAGACAGGAGGCACAGTCTTAGGGAACTTAAACACCATGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031560.14 |
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| CDS GCA 72 bp | CGTCTCTCGGCACGACGGCATACAGCGCGGCAGAAGTaGAGGGCAGAGCTGCTCTTGCCTCCAGAAGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLSARRHTARQK*RAELLLPPEGR Trigger: TCTGCCTTCTGGAGGCAAGAGCAGCTCTGCCCTGCACTTCTGCCGCGCTGTATGCCGTCGTGCCGAGAGACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000123256.3 |
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| CDS TCA 72 bp | AGGACAGGCCCTTCCTGGAAGGCCGTGTGCTTTAAGTaGGCCTCCCTGGCTGAGGAACGTGGAGTGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTGPSWKAVCFK*ASLAEERGVAR Trigger: CCTGGCCACTCCACGTTCCTCAGCCAGGGAGGCTCACTTAAAGCACACGGCCTTCCAGGAAGGGCCTGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000123256.3 |
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| CDS GCA 72 bp | GTCTCCCGTCTTGGTGTAAATCTTGGGGATCTTGGCTaGCGTCGAGGACGGCTGCAGCCTGTCCCCGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSRLGVNLGDLG*RRGRLQPVPVF Trigger: GAAGACGGGGACAGGCTGCAGCCGTCCTCGACGGCAGCCAAGATCCCCAAGATTTACACCAAGACGGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 ENSMUST00000123256.3 |
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| CDS CAA 72 bp | CATACAGCGCGGCAGAAGTGCAGGGCAGAGCTGCTCTaGCCTCCAGAAGGCAGAATGAAGGCCTTGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HTARQKCRAELL*PPEGRMKALSG Trigger: CCCGCTCAAGGCCTTCATTCTGCCTTCTGGAGGCAAGAGCAGCTCTGCCCTGCACTTCTGCCGCGCTGTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000123256.3 |
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| CDS CCA 72 bp | CTTTGTCTCCCGTCTTGGTGTAAATCTTGGGGATCTTaGCTGCCGTCGAGGACGGCTGCAGCCTGTCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LCLPSWCKSWGS*LPSRTAAACPR Trigger: ACGGGGACAGGCTGCAGCCGTCCTCGACGGCAGCCAAGATCCCCAAGATTTACACCAAGACGGGAGACAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 ENSMUST00000123256.3 |
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| CDS GCA 72 bp | GACGGCATACAGCGCGGCAGAAGTGCAGGGCAGAGCTaGTCTTGCCTCCAGATTTCTGAAGCTCTTCGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DGIQRGRSAGQS*SCLQISEALRQ Trigger: TTGCCGAAGAGCTTCAGAAATCTGGAGGCAAGAGCAGCTCTGCCCTGCACTTCTGCCGCGCTGTATGCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112245.6 |
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| CDS CCA 72 bp | AAGAACTTCGCCACGTTTGCATCCGTCTCTCCCATCTaGACAAGAGGCACCACACGTCTCTCGGCACGACGG | + |
|
Preference number: 6 (lower is better) Translates to: KNFATFASVSPI*TRGTTRLSARR Trigger: CCGTCGTGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACGGATGCAAACGTGGCGAAGTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031560.14 ENSMUST00000112245.6 ENSMUST00000123256.3 |
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| CDS TCA 72 bp | TGTGCCTGCGCTGGCTCTTATTTCCTAAACAGAGCCTaGCTTCAGAGTGGGACAGGGCCACTGGGGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: CACAGSYFLNRA*LQSGTGPLGTQ Trigger: CTGTGTCCCCAGTGGCCCTGTCCCACTCTGAAGTCAGGCTCTGTTTAGGAAATAAGAGCCAGCGCAGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS GCA 72 bp | GTGGAGTGGCCAGGGCGGAGCCGACGTCCTGTAGCATaGACTGGATTTTCTGAAGCTCTTCGGCAAACATGT | + |
|
Preference number: 6 (lower is better) Translates to: VEWPGRSRRPVA*TGFSEALRQTC Trigger: ACATGTTTGCCGAAGAGCTTCAGAAAATCCAGTGCATGCTACAGGACGTCGGCTCCGCCCTGGCCACTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000123256.3 |
||
| CDS CCA 72 bp | CACAGTCCAATATACATGATGAAGGGAGGGGCCTGGTaGTCAGACAGACCCGCCACACTCCACTTAAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: HSPIYMMKGGAW*SDRPATLHLST Trigger: GGTGCTTAAGTGGAGTGTGGCGGGTCTGTCTGACCACCAGGCCCCTCCCTTCATCATGTATATTGGACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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| CDS CAA 90 bp | CCCGCCACACTCCACTTAAGCACCTGTTTAAGAACTTCGCCACGTTaGCATCCGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PATLHLSTCLRTSPR*HPSLPSGQEAPHVS Trigger: AGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACGGATGCAAACGTGGCGAAGTTCTTAAACAGGTGCTTAAGTGGAGTGTGGCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS GCA 72 bp | ATACAGCGCGGCAGAAGTGCAGGGCAGAGCTGCTCTTaGCTCCAGATTTCTGAAGCTCTTCGGCAAACATGT | + |
|
Preference number: 6 (lower is better) Translates to: IQRGRSAGQSCS*LQISEALRQTC Trigger: ACATGTTTGCCGAAGAGCTTCAGAAATCTGGAGGCAAGAGCAGCTCTGCCCTGCACTTCTGCCGCGCTGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112245.6 |
||
| CDS TCA 72 bp | GCGGAGCCGACGTCCTGTAGCATGCACTGGATTTTCTaGAGCTCTTCGGCAAACATGTGGCCTTTTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AEPTSCSMHWIF*SSSANMWPFSV Trigger: CACAGAAAAAGGCCACATGTTTGCCGAAGAGCTTCAGAAAATCCAGTGCATGCTACAGGACGTCGGCTCCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031560.14 ENSMUST00000123256.3 |
||
| CDS CCA 72 bp | TGGCTCTTATTTCCTAAACAGAGCCTGACTTCAGAGTaGGACAGGGCCACTGGGGACACAGCACAGTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: WLLFPKQSLTSE*DRATGDTAQSN Trigger: ATTGGACTGTGCTGTGTCCCCAGTGGCCCTGTCCCACTCTGAAGTCAGGCTCTGTTTAGGAAATAAGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
||
| CDS CAA 72 bp | CTCCACTTAAGCACCTGTTTAAGAACTTCGCCACGTTaGCATCCGTCTCTCCCATCTGGACAAGAGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LHLSTCLRTSPR*HPSLPSGQEAP Trigger: TGGTGCCTCTTGTCCAGATGGGAGAGACGGATGCAAACGTGGCGAAGTTCTTAAACAGGTGCTTAAGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123256.3 |
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