Pregenerated sensors for MMAA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037022Ensembl transcript IDs: ENSMUST00000048718.4, ENSMUST00000210231.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCTTTGGCCTCCAGACTTCCGAGCGCCTACGGAGCAACTTGAGTaGGCTCACGTACTCTGCTTGGATCCTGCGGGCTGGCACAATCAA | + |
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Preference number: 1 (lower is better) Translates to: HLWPPDFRAPTEQLE*AHVLCLDPAGWHNQ Trigger: TTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR GCA 90 bp | GACTTCCGAGCGCCTACGGAGCAACTTGAGTGCGCTCACGTACTCTaGTTGGATCCTGCGGGCTGGCACAATCAAGTCTCCATCAGATTT | + |
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Preference number: 1 (lower is better) Translates to: DFRAPTEQLECAHVL*LDPAGWHNQVSIRF Trigger: AAATCTGATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAGGCGCTCGGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR CCA 90 bp | TCCGAGCGCCTACGGAGCAACTTGAGTGCGCTCACGTACTCTGCTTaGATCCTGCGGGCTGGCACAATCAAGTCTCCATCAGATTTAGTT | + |
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Preference number: 1 (lower is better) Translates to: SERLRSNLSALTYSA*ILRAGTIKSPSDLV Trigger: AACTAAATCTGATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAGGCGCTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR GCA 90 bp | GAAGGGATACAGTGGAACCAGTCCTACACAGCAGGGTCTCCTAGATaGTGTGTGTCTGACCACACCACCCACAGCTTCAAGGTTACAAGC | + |
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Preference number: 1 (lower is better) Translates to: EGIQWNQSYTAGSPR*CVSDHTTHSFKVTS Trigger: GCTTGTAACCTTGAAGCTGTGGGTGGTGTGGTCAGACACACAGCATCTAGGAGACCCTGCTGTGTAGGACTGGTTCCACTGTATCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR TCA 90 bp | TCTCGGATGCTGGGGTGGGTCTTGAAGTGTTCTAGGACGTTTTCCTaGATGAGATTCCACATCCAGACTTTGTGCTGTGTCTGTCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: SRMLGWVLKCSRTFS*MRFHIQTLCCVCLL Trigger: CAAGAGACAGACACAGCACAAAGTCTGGATGTGGAATCTCATTCAGGAAAACGTCCTAGAACACTTCAAGACCCACCCCAGCATCCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR CCA 90 bp | ATTCTACTCTGCCTTACCCTTCCCTGCTTCTGCTTCCCAAGTACTTaGATTAAAGGTGGGTACCACTATGCTGAGATCTCCCCCATTTAC | + |
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Preference number: 1 (lower is better) Translates to: ILLCLTLPCFCFPST*IKGGYHYAEISPIY Trigger: GTAAATGGGGGAGATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCAGGGAAGGGTAAGGCAGAGTAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR GCA 90 bp | CAAGTGGACAGCAGTAGAACACAAACATACCCAGTGATGACCTGCTaGCACCACACGCAAGTATACACAGTGTGTGTTTACACACTTACA | + |
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Preference number: 1 (lower is better) Translates to: QVDSSRTQTYPVMTC*HHTQVYTVCVYTLT Trigger: TGTAAGTGTGTAAACACACACTGTGTATACTTGCGTGTGGTGGCAGCAGGTCATCACTGGGTATGTTTGTGTTCTACTGCTGTCCACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR TCA 90 bp | CTGAATAAGTCAGAAGAAAGCATCAGATTCCTACTTACAGATGTTTaGAAATCACCACCCAGGGACTGGGAGCTGAACGGAGTCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LNKSEESIRFLLTDV*KSPPRDWELNGVLF Trigger: GAAGAGGACTCCGTTCAGCTCCCAGTCCCTGGGTGGTGATTTTCAAACATCTGTAAGTAGGAATCTGATGCTTTCTTCTGACTTATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR TCA 90 bp | CTTTGCCTGCATATATGTATATGTGCTCCGTGCATGCCACGTGTCTaGATAAGTCAGAAGAAAGCATCAGATTCCTACTTACAGATGTTT | + |
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Preference number: 1 (lower is better) Translates to: LCLHICICAPCMPRV*ISQKKASDSYLQMF Trigger: AAACATCTGTAAGTAGGAATCTGATGCTTTCTTCTGACTTATTCAGACACGTGGCATGCACGGAGCACATATACATATATGCAGGCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR GCA 90 bp | TACATGGCCACTTCAGAAATTCTTAGAATAGTCTGGTACACTAAATaGCAATCAGGACTTTCAATTCCAAGAAACCTGGTGTGTGTTGTT | + |
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Preference number: 1 (lower is better) Translates to: YMATSEILRIVWYTK*QSGLSIPRNLVCVV Trigger: AACAACACACACCAGGTTTCTTGGAATTGAAAGTCCTGATTGGCATTTAGTGTACCAGACTATTCTAAGAATTTCTGAAGTGGCCATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CCA 90 bp | TTGTGCGTATACACACCTTCACTTCACTCCTTCAGGAGACTAAAGTaGCCAACAAGATCAATTGTCCCAATTTATACTATTGCTTTATAT | + |
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Preference number: 1 (lower is better) Translates to: LCVYTPSLHSFRRLK*PTRSIVPIYTIALY Trigger: ATATAAAGCAATAGTATAAATTGGGACAATTGATCTTGTTGGCCACTTTAGTCTCCTGAAGGAGTGAAGTGAAGGTGTGTATACGCACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 90 bp | CGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGGAGCAACTaGAGTGCGCTCACGTACTCTGCTTGGATCCTGCGGGCTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: RITFGLQTSERLRSN*SALTYSAWILRAGT Trigger: TGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGAAATGCGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGGAGCTTGGATCCTGCGGGCTaGCACAATCAAGTCTCCATC | + |
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Preference number: 2 (lower is better) Translates to: LAEMRITFGLQTSERLRSLDPAG*HNQVSI Trigger: GATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAA...GCTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR CAA 90 bp | TTCCGAGCGCCTACGGAGCAACTTGAGTGCGCTCACGTACTCTGCTaGGATCCTGCGGGCTGGCACAATCAAGTCTCCATCAGATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: FRAPTEQLECAHVLC*DPAGWHNQVSIRFS Trigger: ACTAAATCTGATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAGGCGCTCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTAGCCAGGCAGGGTGGTaGACACCTTTATCTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTSQAGW*TPLSQH Trigger: ATGCTGAGATAAAGGTGTGCACCACCCTGCCTGGCT...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR GCA 90 bp | CACTTCTGGCAGAAATGCGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGATAACCTGTGCCCTTaGTCAGTCAGCATTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: HFWQKCESPLASRLPSAYDNLCP*SVSIFP Trigger: TGGGAAAATGCTGACTGAGCAAGGGCACAGGTTATC...GTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCCCAGGGACTGGGAGCTaGACGGAGTCCTCTTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: CFCFPSTWIKGGYHYAEIPGTGS*TESSSR Trigger: TCTTGAAGAGGACTCCGTTCAGCTCCCAGTCCCTGG...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR CCA 90 bp | ACGTACTCTGCTTGGATCCTGCGGGCTGGCACAATCAAGTCTCCATCAGATTTAAGAGGGACCCACCACTaGTGCAAGAAGATGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: TYSAWILRAGTIKSPSDLRGTHH*CKKMDP Trigger: TGGATCCATCTTCTTGCACCAGTGGTGGGTCCCTCT...TAAATCTGATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCCCTTTATCTCAGCATTaGGGAGGCAGAGCCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: CFCFPSTWIKGGYHYAEIPLSQH*GGRARW Trigger: CCACCTGGCTCTGCCTCCTCAATGCTGAGATAAAGG...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR GCA 90 bp | TCACGTACTCTGCTTGGATCCTGCGGGCTGGCACAATCAAGTCTCCATCAGATTAGCACAGATAACCTGTaGCCTTGCTCAGTCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: SRTLLGSCGLAQSSLHQISTDNL*PCSVSI Trigger: AATGCTGACTGAGCAAGGGCACAGGTTATCTGTGCT...AATCTGATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTGGCAGAAATGCGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGCTTCACACAACACAATaGCTTCATTTGTGGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: TSGRNANHLWPPDFRAPTLHTTQ*LHLWSL Trigger: CAAGGACCACAAATGAAGCCATTGTGTTGTGTGAAG...CGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR TCA 90 bp | CATTGTGTCCCACATCTCAGTGATGCCCTCTCCACTTCTGGCAGAAATGCGAATGGCATTCATATCTCTTaGCAGCTCAATCATCCGGGT | + |
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Preference number: 2 (lower is better) Translates to: HCVPHLSDALSTSGRNANGIHIS*QLNHPG Trigger: ACCCGGATGATTGAGCTGTCAAGAGATATGAATGCC...ATTCGCATTTCTGCCAGAAGTGGAGAGGGCATCACTGAGATGTGGGACACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCCGAAACTGCTGCATTTaGACAGGCCAGATGCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: CFCFPSTWIKGGYHYAEIRNCCI*TGQMPN Trigger: ATTGGGCATCTGGCCTGTTCAAATGCAGCAGTTTCG...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTCAGAGAACAGAGACTTaGTGTAACCATTTCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTQRTET*CNHFKM Trigger: CATTTTGAAATGGTTACATCAAGTCTCTGTTCTCTG...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTAGAGAAATTATGAGATaGCCACTCTGGACATTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTREIMR*PLWTFL Trigger: TAGAAATGTCCAGAGTGGGCATCTCATAATTTCTCT...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR CCA 90 bp | TCATGCTTTGTACCCATAATCCACCACTGTAATGCTGTAGGGGCAGAGAGGACAGTGGAGTTTAAAAACTaGACTCACATCATTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SCFVPIIHHCNAVGAERTVEFKN*THIIPG Trigger: ACCTGGAATGATGTGAGTCCAGTTTTTAAACTCCAC...TGTCCTCTCTGCCCCTACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCCAGTTCTCATTTCTCTaGGAGATGTCTAAAGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: CFCFPSTWIKGGYHYAEIQFSFL*EMSKVA Trigger: AGCTACTTTAGACATCTCTCAGAGAAATGAGAACTG...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCACACAGGTGATATTTTaGATATTCAGCACTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CFCFPSTWIKGGYHYAEITQVIF*IFSTQG Trigger: TCCCTGAGTGCTGAATATCCAAAATATCACCTGTGT...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCAAAATGTAAGGTCTTCTTTCTCCTCCCAAGCTTCCTCCACTTTTGAGTCTAAAGAAGGGATACAGTaGAACCAGTCCTACACAGCA | + |
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Preference number: 2 (lower is better) Translates to: FQNVRSSFSSQASSTFESKEGIQ*NQSYTA Trigger: TGCTGTGTAGGACTGGTTCCACTGTATCCCTTCTTT...AGACTCAAAAGTGGAGGAAGCTTGGGAGGAGAAAGAAGACCTTACATTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR CCA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTAAATCTTTGAGAGTTTaGTGTCTCCCAGCCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: DKRIGKRGELIFLTCLSGKSLRV*CLPACG Trigger: GCCACAGGCTGGGAGACACCAAACTCTCAAAGATTT...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR CCA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTATGAGATGCCCACTCTaGACATTTCTAAGCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: DKRIGKRGELIFLTCLSGMRCPL*TFLSIQ Trigger: CTGGATGCTTAGAAATGTCCAGAGTGGGCATCTCAT...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 90 bp | AGCCAAGTGGAGTTTAAAAACTGGACTCACATCATTCCAGGTGTCTaGTTACAAGTATACATGGCCACTTCAGAAATTCTTAGAATAGTC | + |
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Preference number: 2 (lower is better) Translates to: SQVEFKNWTHIIPGV*LQVYMATSEILRIV Trigger: GACTATTCTAAGAATTTCTGAAGTGGCCATGTATACTTGTAACAAGACACCTGGAATGATGTGAGTCCAGTTTTTAAACTCCACTTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCAAGTGGAGTTTAAAAACTGGACTCACATCATTCCAGGTGTCTTGTTACAAGTCTGGTACACTAAATaGCAATCAGGACTTTCAATT | + |
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Preference number: 2 (lower is better) Translates to: SQVEFKNWTHIIPGVLLQVWYTK*QSGLSI Trigger: AATTGAAAGTCCTGATTGGCATTTAGTGTACCAGAC...TTGTAACAAGACACCTGGAATGATGTGAGTCCAGTTTTTAAACTCCACTTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 90 bp | TGTTATTCAGTGAGTGTTCATGTTGCTTATAATTCTGGTACTATCTaGAAGTATGTAAGCACCTACACAGAGAAACCCTGTCTCAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: CYSVSVHVAYNSGTI*KYVSTYTEKPCLKN Trigger: GTTTTTGAGACAGGGTTTCTCTGTGTAGGTGCTTACATACTTCAAGATAGTACCAGAATTATAAGCAACATGAACACTCACTGAATAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR GCA 72 bp | GCGCCTACGGAGCAACTTGAGTGCGCTCACGTACTCTaGTTGGATCCTGCGGGCTGGCACAATCAAGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: APTEQLECAHVL*LDPAGWHNQVS Trigger: GGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR CAA 90 bp | CCACTGAGGACCTTTCTCTCCATCAGGGGGATCTGTTCTCGGATGCTGGGGTGGAAATGCGAATCACCTTaGGCCTCCAGACTTCCGAGC | + |
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Preference number: 3 (lower is better) Translates to: PLRTFLSIRGICSRMLGWKCESP*ASRLPS Trigger: GCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTT...CCACCCCAGCATCCGAGAACAGATCCCCCTGATGGAGAGAAAGGTCCTCAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCAGAAATGCGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGGAGCTCAATGATGCCCCTTTaGATGCCCTGCAGTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: LAEMRITFGLQTSERLRSSMMPL*MPCSSS Trigger: GGATGAACTGCAGGGCATCAAAAGGGGCATCATTGA...GCTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR CCA 72 bp | CTACGGAGCAACTTGAGTGCGCTCACGTACTCTGCTTaGATCCTGCGGGCTGGCACAATCAAGTCTCCATCA | + |
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Preference number: 3 (lower is better) Translates to: LRSNLSALTYSA*ILRAGTIKSPS Trigger: TGATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCAGAAATGCGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGGAGCAGGCATTCATATCTCTaGACAGCTCAATCATCCGGG | + |
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Preference number: 3 (lower is better) Translates to: LAEMRITFGLQTSERLRSRHSYL*TAQSSG Trigger: CCCGGATGATTGAGCTGTCAAGAGATATGAATGCCT...GCTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR TCA 72 bp | TTGGCAGCCAGCTCCCCACTGGCCAGCATTTGGTGCTaGAACTCTCTCATTGTGTCCCACATCTCAGTGATG | + |
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Preference number: 3 (lower is better) Translates to: LAASSPLASIWC*NSLIVSHISVM Trigger: CATCACTGAGATGTGGGACACAATGAGAGAGTTTCAGCACCAAATGCTGGCCAGTGGGGAGCTGGCTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR CCA 72 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTaGCACCCTGTCACTACTGATACCACCAGGGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: SHPPLLAFFTMQ*HPVTTDTTRAG Trigger: ACCTGCCCTGGTGGTATCAGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CCA 72 bp | CAGGCTAGCATGTCAGGGCATAAAGAAGGGATACAGTaGAACCAGTCCTACACAGCAGGGTCTCCTAGATGC | + |
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Preference number: 3 (lower is better) Translates to: QASMSGHKEGIQ*NQSYTAGSPRC Trigger: GCATCTAGGAGACCCTGCTGTGTAGGACTGGTTCCACTGTATCCCTTCTTTATGCCCTGACATGCTAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CCA 72 bp | TCCGCTGTCATGGCGAGGGCACCAAGTCGAGCCAAGTaGAGTTTAAAAACTGGACTCACATCATTCCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: SAVMARAPSRAK*SLKTGLTSFQV Trigger: CACCTGGAATGATGTGAGTCCAGTTTTTAAACTCCACTTGGCTCGACTTGGTGCCCTCGCCATGACAGCGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR TCA 72 bp | GGTGCTGAAACTCTCTCATTGTGTCCCACATCTCAGTaGTGCCCTCTCCACTTCTGGCAGAAATGCGAATCA | + |
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Preference number: 3 (lower is better) Translates to: GAETLSLCPTSQ*CPLHFWQKCES Trigger: TGATTCGCATTTCTGCCAGAAGTGGAGAGGGCATCACTGAGATGTGGGACACAATGAGAGAGTTTCAGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR CCA 72 bp | TGCCTTACCCTTCCCTGCTTCTGCTTCCCAAGTACTTaGATTAAAGGTGGGTACCACTATGCTGAGATCTCC | + |
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Preference number: 3 (lower is better) Translates to: CLTLPCFCFPST*IKGGYHYAEIS Trigger: GGAGATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCAGGGAAGGGTAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR-3UTR CAA 90 bp | CATTGTGTCCCACATCTCAGTGATGCCCTCTCCACTTCTGGCAGAAATGCGAATACACAATGGCTTCATTaGTGGTCCTTGTCACTCCTC | + |
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Preference number: 3 (lower is better) Translates to: HCVPHLSDALSTSGRNANTQWLH*WSLSLL Trigger: GAGGAGTGACAAGGACCACAAATGAAGCCATTGTGT...ATTCGCATTTCTGCCAGAAGTGGAGAGGGCATCACTGAGATGTGGGACACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| 3UTR TCA 72 bp | CTGGGGTGGGTCTTGAAGTGTTCTAGGACGTTTTCCTaGATGAGATTCCACATCCAGACTTTGTGCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGWVLKCSRTFS*MRFHIQTLCCV Trigger: GACACAGCACAAAGTCTGGATGTGGAATCTCATTCAGGAAAACGTCCTAGAACACTTCAAGACCCACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCGGGACACAGCTCAGTTaGGAAAGTGCTAGCTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: CFCFPSTWIKGGYHYAEIGTQLS*ESASYV Trigger: TACATAGCTAGCACTTTCCAAACTGAGCTGTGTCCC...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR GCA 72 bp | AGCAGTAGAACACAAACATACCCAGTGATGACCTGCTaGCACCACACGCAAGTATACACAGTGTGTGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SSRTQTYPVMTC*HHTQVYTVCVY Trigger: GTAAACACACACTGTGTATACTTGCGTGTGGTGGCAGCAGGTCATCACTGGGTATGTTTGTGTTCTACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR GCA 72 bp | CTTAGGACCTCAGGACCCACACAAAGCTGGGTATCATaGTTTGTACCCATAATCCACCACTGTAATGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LRTSGPTQSWVS*FVPIIHHCNAV Trigger: TACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGATACCCAGCTTTGTGTGGGTCCTGAGGTCCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR-3UTR CAA 90 bp | TCATGCTTTGTACCCATAATCCACCACTGTAATGCTGTAGGGGCAGAGAGGACACTGGGGCTAGCTGAATaGCTAAGTTTCATATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SCFVPIIHHCNAVGAERTLGLAE*LSFIFR Trigger: TCTGAATATGAAACTTAGCAATTCAGCTAGCCCCAG...TGTCCTCTCTGCCCCTACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCACGGGTGAAAAATCTTaGAGAGTTTGGTGTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CFCFPSTWIKGGYHYAEITGEKS*RVWCLP Trigger: TGGGAGACACCAAACTCTCAAAGATTTTTCACCCGT...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR TCA 72 bp | CAGATGTTTGAAAATCACCACCCAGGGACTGGGAGCTaGACGGAGTCCTCTTCAAGAATACCAATTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QMFENHHPGTGS*TESSSRIPIVL Trigger: AAGAACAATTGGTATTCTTGAAGAGGACTCCGTTCAGCTCCCAGTCCCTGGGTGGTGATTTTCAAACATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR GCA 72 bp | TTGTATATTCTACTCTGCCTTACCCTTCCCTGCTTCTaGTTCCCAAGTACTTGGATTAAAGGTGGGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LYILLCLTLPCF*FPSTWIKGGYH Trigger: GTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCAGGGAAGGGTAAGGCAGAGTAGAATATACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR CCA 72 bp | TGTAGTGGCCAGAGCACAAGTGATTGGTCAAACAGCTaGCTTTTTCTTTATTATTCAGTTCCAGATCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CSGQSTSDWSNS*LFLYYSVPDPA Trigger: GGCTGGATCTGGAACTGAATAATAAAGAAAAAGCCAGCTGTTTGACCAATCACTTGTGCTCTGGCCACTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR-3UTR CAA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTACCTTTATCTCAGCATaGAGGAGGCAGAGCCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DKRIGKRGELIFLTCLSGTFISA*RRQSQV Trigger: CACCTGGCTCTGCCTCCTCAATGCTGAGATAAAGGT...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR-3UTR CAA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTTCGAAACTGCTGCATTaGAACAGGCCAGATGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DKRIGKRGELIFLTCLSGSKLLH*NRPDAQ Trigger: TTGGGCATCTGGCCTGTTCAAATGCAGCAGTTTCGA...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR CCA 72 bp | AGTTGCTGCAAGTGTAGTGGCCAGAGCACAAGTGATTaGTCAAACAGCTGGCTTTTTCTTTATTATTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SCCKCSGQSTSD*SNSWLFLYYSV Trigger: AACTGAATAATAAAGAAAAAGCCAGCTGTTTGACCAATCACTTGTGCTCTGGCCACTACACTTGCAGCAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAAGTGGAGTTTAAAAACTGGACTCACATCATTCCAGGTGTCTTGTTACAAAAGCTTCCTCCACTTTaGAGTCTTGAGAAGAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: SQVEFKNWTHIIPGVLLQKLPPL*SLEKKL Trigger: TAGTTTCTTCTCAAGACTCAAAAGTGGAGGAAGCTT...TTGTAACAAGACACCTGGAATGATGTGAGTCCAGTTTTTAAACTCCACTTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR GCA 72 bp | TCACTACTGATACCACCAGGGCAGGTAGTTATTCCTTaGAATAGCTTATTTAAGAGAAATTATGAGATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLIPPGQVVIP*NSLFKRNYEMP Trigger: GGGCATCTCATAATTTCTCTTAAATAAGCTATTGCAAGGAATAACTACCTGCCCTGGTGGTATCAGTAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR CCA 72 bp | CTAAATGCCAATCAGGACTTTCAATTCCAAGAAACCTaGTGTGTGTTGTTCTGGCCTCAAATAAGTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LNANQDFQFQET*CVLFWPQISFQ Trigger: CTGAAAACTTATTTGAGGCCAGAACAACACACACCAGGTTTCTTGGAATTGAAAGTCCTGATTGGCATTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR CCA 72 bp | GCTTTTTCTTTATTATTCAGTTCCAGATCCAGCCCATaGGATGGTAGCATTCACATTTACTGTGAGATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AFSLLFSSRSSP*DGSIHIYCEIQ Trigger: CTGAATCTCACAGTAAATGTGAATGCTACCATCCCATGGGCTGGATCTGGAACTGAATAATAAAGAAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR CCA 72 bp | TACACACCTTCACTTCACTCCTTCAGGAGACTAAAGTaGCCAACAAGATCAATTGTCCCAATTTATACTATT | + |
|
Preference number: 3 (lower is better) Translates to: YTPSLHSFRRLK*PTRSIVPIYTI Trigger: AATAGTATAAATTGGGACAATTGATCTTGTTGGCCACTTTAGTCTCCTGAAGGAGTGAAGTGAAGGTGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR TCA 72 bp | GAGTCCTCTTCAAGAATACCAATTGTTCTTAATCACTaGGACATCTCTCCTGCCCTGATAGCTATATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ESSSRIPIVLNH*DISPALIAIFL Trigger: TAAAAATATAGCTATCAGGGCAGGAGAGATGTCTCAGTGATTAAGAACAATTGGTATTCTTGAAGAGGACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR GCA 72 bp | ACTTCAGAAATTCTTAGAATAGTCTGGTACACTAAATaGCAATCAGGACTTTCAATTCCAAGAAACCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TSEILRIVWYTK*QSGLSIPRNLV Trigger: CACCAGGTTTCTTGGAATTGAAAGTCCTGATTGGCATTTAGTGTACCAGACTATTCTAAGAATTTCTGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR GCA 72 bp | TTCCTTGCAATAGCTTATTTAAGAGAAATTATGAGATaGCCACTCTGGACATTTCTAAGCATCCAGTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FLAIAYLREIMR*PLWTFLSIQFS Trigger: TGAAAACTGGATGCTTAGAAATGTCCAGAGTGGGCATCTCATAATTTCTCTTAAATAAGCTATTGCAAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGAAATGCGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGGAGCTGGTTCCGCAGCTCCTaGTCCCGCTGGAGGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAEMRITFGLQTSERLRSWFRSS*SRWRAK Trigger: CTTAGCCCTCCAGCGGGAGCAGGAGCTGCGGAACCA...GCTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| 3UTR CAA 72 bp | TTTGGCCTCCAGACTTCCGAGCGCCTACGGAGCAACTaGAGTGCGCTCACGTACTCTGCTTGGATCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FGLQTSERLRSN*SALTYSAWILR Trigger: CCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR CCA 90 bp | GCTCACGTACTCTGCTTGGATCCTGCGGGCTGGCACAATCAAGTCTCCATCAGAGTGAGGGGCTTTCCTTaGTTCCGCAGCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHVLCLDPAGWHNQVSIRVRGFP*FRSSCS Trigger: GGAGCAGGAGCTGCGGAACCAAGGAAAGCCCCTCAC...TCTGATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTGTCTGCTGCTCGTCCTaGGGAGAGGGCTCCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTVCCSS*GEGSTE Trigger: CTCAGTGGAGCCCTCTCCCCAGGACGAGCAGCAGAC...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR CAA 72 bp | CCTACGGAGCAACTTGAGTGCGCTCACGTACTCTGCTaGGATCCTGCGGGCTGGCACAATCAAGTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PTEQLECAHVLC*DPAGWHNQVSI Trigger: GATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGCGCACTCAAGTTGCTCCGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| 3UTR CAA 72 bp | TGCCCTCTCCACTTCTGGCAGAAATGCGAATCACCTTaGGCCTCCAGACTTCCGAGCGCCTACGGAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: CPLHFWQKCESP*ASRLPSAYGAT Trigger: AGTTGCTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAGAAGTGGAGAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR CCA 90 bp | ACGTACTCTGCTTGGATCCTGCGGGCTGGCACAATCAAGTCTCCATCAGATTTAAGCTCCTGCTCCCGCTaGAGGGCTAAGACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TYSAWILRAGTIKSPSDLSSCSR*RAKTLC Trigger: GCAGAGAGTCTTAGCCCTCCAGCGGGAGCAGGAGCT...TAAATCTGATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGTACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTGTGTCCAAAACAGTTTaGCAGAGCACCTGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTVSKTV*QSTWGS Trigger: GGACCCCCAGGTGCTCTGCCAAACTGTTTTGGACAC...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGGCAGAAATGCGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGGAAAGTCCTTCTGTGTaGTCCTTCAAGGTTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGRNANHLWPPDFRAPTESPSV*SFKVAW Trigger: CCAGGCAACCTTGAAGGACCACACAGAAGGACTTTC...CGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| 3UTR CAA 72 bp | CATAGCCCCCTCCTTCACACAACACAATGGCTTCATTaGTGGTCCTTGTCACTCCTCCTAGAGTCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSPLLHTTQWLH*WSLSLLLESHW Trigger: CCAGTGGGACTCTAGGAGGAGTGACAAGGACCACAAATGAAGCCATTGTGTTGTGTGAAGGAGGGGGCTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGAAGAAACTACTTAGCAGGCTAGCATGTCAGGGCATAAAGAAGGGATACTGGTTCCGCAGCTCCTaGTCCCGCTGGAGGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEKKLLSRLACQGIKKGYWFRSS*SRWRAK Trigger: CTTAGCCCTCCAGCGGGAGCAGGAGCTGCGGAACCA...GTATCCCTTCTTTATGCCCTGACATGCTAGCCTGCTAAGTAGTTTCTTCTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR GCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTACTCTGCTTGGATCCTaGGGGCTGGCACAATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTTLLGS*GLAQSS Trigger: ACTTGATTGTGCCAGCCCGCAGGATCCAAGCAGAGT...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR CCA 90 bp | TCCCACATCTCAGTGATGCCCTCTCCACTTCTGGCAGAAATGCGAATCACCTTTGTGTCCAAAACAGTTTaGCAGAGCACCTGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHISVMPSPLLAEMRITFVSKTV*QSTWGS Trigger: GGACCCCCAGGTGCTCTGCCAAACTGTTTTGGACAC...AAAGGTGATTCGCATTTCTGCCAGAAGTGGAGAGGGCATCACTGAGATGTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCAGCTCCTGCTCCCGCTaGAGGGCTAAGACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFCFPSTWIKGGYHYAEISSCSR*RAKTLC Trigger: GCAGAGAGTCTTAGCCCTCCAGCGGGAGCAGGAGCT...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR CCA 90 bp | TCATGCTTTGTACCCATAATCCACCACTGTAATGCTGTAGGGGCAGAGAGGACACAGCCAGCTCCCCACTaGCCAGCATTTGGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCFVPIIHHCNAVGAERTQPAPH*PAFGAE Trigger: TTCAGCACCAAATGCTGGCCAGTGGGGAGCTGGCTG...TGTCCTCTCTGCCCCTACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR CCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTTCTCGGATGCTGGGGTaGGTCTTGAAGTGTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTSRMLG*VLKCSR Trigger: CCTAGAACACTTCAAGACCCACCCCAGCATCCGAGA...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR TCA 90 bp | ACAGCTAGCACAGATAACCTGTGCCCTTGCTCAGTCAGCATTTTCCCAAAACATCTCTGCAGAAGCACCTaGGCCAGCTCCCTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TASTDNLCPCSVSIFPKHLCRST*ASSLFL Trigger: AAGGAAGAGGGAGCTGGCTCAGGTGCTTCTGCAGAG...ATGTTTTGGGAAAATGCTGACTGAGCAAGGGCACAGGTTATCTGTGCTAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAGAAATGCGAATCACCTTTGGCCTCCAGACTTCCGAGCGCCTACGGAGACCCTCTTAGTACAATaGTGTCCAAAACAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGRNANHLWPPDFRAPTETLLVQ*CPKQFG Trigger: GCCAAACTGTTTTGGACACCATTGTACTAAGAGGGT...CTCCGTAGGCGCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTTCTGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTGAAAGTCCTTCTGTGTaGTCCTTCAAGGTTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTESPSV*SFKVAW Trigger: CCAGGCAACCTTGAAGGACCACACAGAAGGACTTTC...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCTGTCCCACATCTCAGTaGTGCCCTCTCCACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFCFPSTWIKGGYHYAEICPTSQ*CPLHFW Trigger: CCAGAAGTGGAGAGGGCATCACTGAGATGTGGGACA...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR GCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTAGCACAGATAACCTGTaGCCTTGCTCAGTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTSTDNL*PCSVSI Trigger: AATGCTGACTGAGCAAGGGCACAGGTTATCTGTGCT...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR GCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTCACATCCAGACTTTGTaGTGTGTCTGTCTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTHIQTL*CVCLLA Trigger: TGCCAAGAGACAGACACAGCACAAAGTCTGGATGTG...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR CCA 90 bp | TCATGCTTTGTACCCATAATCCACCACTGTAATGCTGTAGGGGCAGAGAGGACATTGGATCCTGCGGGCTaGCACAATCAAGTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCFVPIIHHCNAVGAERTLDPAG*HNQVSI Trigger: GATGGAGACTTGATTGTGCCAGCCCGCAGGATCCAA...TGTCCTCTCTGCCCCTACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| 3UTR CAA 72 bp | ATAACAACCAAATCTGCCATTTCAATGATGCCCCTTTaGATGCCCTGCAGTTCATCCCCTCCTGCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITTKSAISMMPL*MPCSSSPPAGG Trigger: GCCACCAGCAGGAGGGGATGAACTGCAGGGCATCAAAAGGGGCATCATTGAAATGGCAGATTTGGTTGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS-3UTR TCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTACATTCTATGAATGTTaGTTTTCCTGCACCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTTFYEC*FSCTRG Trigger: CCCCCTGGTGCAGGAAAATCAACATTCATAGAATGT...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR TCA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTTCTAGGACGTTTTCCTaGATGAGATTCCACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTSRTFS*MRFHIQ Trigger: CTGGATGTGGAATCTCATTCAGGAAAACGTCCTAGA...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGTGGAGTTTAAAAACTGGACTCACATCATTCCAGGTGTCTTGTTACAACTCTGCAGAAGCACCTaGGCCAGCTCCCTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQVEFKNWTHIIPGVLLQLCRST*ASSLFL Trigger: AAGGAAGAGGGAGCTGGCTCAGGTGCTTCTGCAGAG...TTGTAACAAGACACCTGGAATGATGTGAGTCCAGTTTTTAAACTCCACTTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGTGGAGTTTAAAAACTGGACTCACATCATTCCAGGTGTCTTGTTACAAGGGAGAGGGCTCCACTaGGGACCTTTCTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SQVEFKNWTHIIPGVLLQGRGLH*GPFSPS Trigger: TGATGGAGAGAAAGGTCCTCAGTGGAGCCCTCTCCC...TTGTAACAAGACACCTGGAATGATGTGAGTCCAGTTTTTAAACTCCACTTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCGGCATTCATATCTCTTaGCAGCTCAATCATCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFCFPSTWIKGGYHYAEIGIHIS*QLNHPG Trigger: ACCCGGATGATTGAGCTGTCAAGAGATATGAATGCC...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CCA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTGTGAGGGGCTTTCCTTaGTTCCGCAGCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DKRIGKRGELIFLTCLSGVRGFP*FRSSCS Trigger: GGAGCAGGAGCTGCGGAACCAAGGAAAGCCCCTCAC...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CCA 90 bp | CTTGAGAAGAAACTACTTAGCAGGCTAGCATGTCAGGGCATAAAGAAGGGATACTGCCCTCTCCACTTCTaGCAGAAATGCGAATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKKLLSRLACQGIKKGYCPLHF*QKCESP Trigger: AGGTGATTCGCATTTCTGCCAGAAGTGGAGAGGGCA...GTATCCCTTCTTTATGCCCTGACATGCTAGCCTGCTAAGTAGTTTCTTCTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 72 bp | GTCAGAAGAAAGCATCAGATTCCTACTTACAGATGTTaGAAAATCACCACCCAGGGACTGGGAGCTGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: VRRKHQIPTYRC*KITTQGLGAER Trigger: CCGTTCAGCTCCCAGTCCCTGGGTGGTGATTTTCAAACATCTGTAAGTAGGAATCTGATGCTTTCTTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CCA 90 bp | TTTCAAAATGTAAGGTCTTCTTTCTCCTCCCAAGCTTCCTCCACTTTTGAGTCTAGAGGGACCCACCACTaGTGCAAGAAGATGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FQNVRSSFSSQASSTFESRGTHH*CKKMDP Trigger: TGGATCCATCTTCTTGCACCAGTGGTGGGTCCCTCT...AGACTCAAAAGTGGAGGAAGCTTGGGAGGAGAAAGAAGACCTTACATTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CCA 90 bp | TGCTTCTGCTTCCCAAGTACTTGGATTAAAGGTGGGTACCACTATGCTGAGATCCAATGGCTTCATTTGTaGTCCTTGTCACTCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CFCFPSTWIKGGYHYAEIQWLHL*SLSLLL Trigger: TAGGAGGAGTGACAAGGACCACAAATGAAGCCATTG...GATCTCAGCATAGTGGTACCCACCTTTAATCCAAGTACTTGGGAAGCAGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR GCA 90 bp | TTTCAAAATGTAAGGTCTTCTTTCTCCTCCCAAGCTTCCTCCACTTTTGAGTCTCACTTCTGGCAGAAATaGGAATCACCTTTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQNVRSSFSSQASSTFESHFWQK*ESPLAS Trigger: GGAGGCCAAAGGTGATTCGCATTTCTGCCAGAAGTG...AGACTCAAAAGTGGAGGAAGCTTGGGAGGAGAAAGAAGACCTTACATTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 72 bp | TGTAGTATAGCAAACCAAAGAACGGGTGAAAAATCTTaGAGAGTTTGGTGTCTCCCAGCCTGTGGCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSIANQRTGEKS*RVWCLPACGTR Trigger: TCTTGTGCCACAGGCTGGGAGACACCAAACTCTCAAAGATTTTTCACCCGTTCTTTGGTTTGCTATACTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 72 bp | GGCCAGATGCCCAATAGAACTACTGTAGAACTCCTGTaGGGGACAAATGGAAAGGCAAGAATTATTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQMPNRTTVELL*GTNGKARIIEL Trigger: AAGCTCAATAATTCTTGCCTTTCCATTTGTCCCCAACAGGAGTTCTACAGTAGTTCTATTGGGCATCTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CCA 90 bp | CTTGAGAAGAAACTACTTAGCAGGCTAGCATGTCAGGGCATAAAGAAGGGATACCTTCACACAACACAATaGCTTCATTTGTGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEKKLLSRLACQGIKKGYLHTTQ*LHLWSL Trigger: CAAGGACCACAAATGAAGCCATTGTGTTGTGTGAAG...GTATCCCTTCTTTATGCCCTGACATGCTAGCCTGCTAAGTAGTTTCTTCTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR TCA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTTGCTGGGGTGGGTCTTaGAGTGTTCTAGGACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DKRIGKRGELIFLTCLSGCWGGS*SVLGRF Trigger: AAAACGTCCTAGAACACTTCAAGACCCACCCCAGCA...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR GCA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTGATAACCTGTGCCCTTaGTCAGTCAGCATTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKRIGKRGELIFLTCLSGDNLCP*SVSIFP Trigger: TGGGAAAATGCTGACTGAGCAAGGGCACAGGTTATC...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR TCA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTGGACGTTTTCCTGAATaGGATTCCACATCCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: DKRIGKRGELIFLTCLSGGRFPE*DSTSRL Trigger: AAGTCTGGATGTGGAATCTCATTCAGGAAAACGTCC...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CCA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTTCCTTCAAGGTTGCCTaGACACATAATGTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKRIGKRGELIFLTCLSGSFKVA*THNVLL Trigger: CAGGAGAACATTATGTGTCCAGGCAACCTTGAAGGA...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CCA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTACCCTCTTAGTACAATaGTGTCCAAAACAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DKRIGKRGELIFLTCLSGTLLVQ*CPKQFG Trigger: GCCAAACTGTTTTGGACACCATTGTACTAAGAGGGT...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 72 bp | TACACAGGTGTAACAGATAAACACACAGGTGATATTTaGGATATTCAGCACTCAGGGAAACTCTACAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YTGVTDKHTGDI*DIQHSGKLYKV Trigger: CACTTTGTAGAGTTTCCCTGAGTGCTGAATATCCAAAATATCACCTGTGTGTTTATCTGTTACACCTGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 72 bp | AATCAGGACTTTCAATTCCAAGAAACCTGGTGTGTGTaGTTCTGGCCTCAAATAAGTTTTCAGAAATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NQDFQFQETWCV*FWPQISFQKCG Trigger: ACCACATTTCTGAAAACTTATTTGAGGCCAGAACAACACACACCAGGTTTCTTGGAATTGAAAGTCCTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| 3UTR CAA 72 bp | GAGTTTAAAAACTGGACTCACATCATTCCAGGTGTCTaGTTACAAGTATACATGGCCACTTCAGAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFKNWTHIIPGV*LQVYMATSEIL Trigger: AAGAATTTCTGAAGTGGCCATGTATACTTGTAACAAGACACCTGGAATGATGTGAGTCCAGTTTTTAAACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CAA 90 bp | TGCTGCTCGTCCTGGGGAGAGGGCTCCACTGAGGACCTTTCTCTCCATCAGGGGATGGGGAAGGCACTCTaGAGAGGCAGGTTAGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CCSSWGEGSTEDLSLHQGMGKAL*RGRLVN Trigger: GTTTACTAACCTGCCTCTCAAGAGTGCCTTCCCCAT...CCCCTGATGGAGAGAAAGGTCCTCAGTGGAGCCCTCTCCCCAGGACGAGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| CDS TCA 90 bp | AGCTCCTGCTCCCGCTGGAGGGCTAAGACTCTCTGCAGAAGCACCTaGGCCAGCTCCCTCTTCCTTGTATGGGTTGATTCCACGAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSCSRWRAKTLCRST*ASSLFLVWVDSTRV Trigger: AACTCTCGTGGAATCAACCCATACAAGGAAGAGGGAGCTGGCTCAGGTGCTTCTGCAGAGAGTCTTAGCCCTCCAGCGGGAGCAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
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| CDS-3UTR CAA 90 bp | CATTGTGTCCCACATCTCAGTGATGCCCTCTCCACTTCTGGCAGAAATGCGAATCCGGTGCAGGGTGACTaGAGTGAAGGAGCCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HCVPHLSDALSTSGRNANPVQGD*SEGAMG Trigger: CCCCATGGCTCCTTCACTCAAGTCACCCTGCACCGG...ATTCGCATTTCTGCCAGAAGTGGAGAGGGCATCACTGAGATGTGGGACACAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAGAAACTACTTAGCAGGCTAGCATGTCAGGGCATAAAGAAGGGATACCCGGTGCAGGGTGACTaGAGTGAAGGAGCCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEKKLLSRLACQGIKKGYPVQGD*SEGAMG Trigger: CCCCATGGCTCCTTCACTCAAGTCACCCTGCACCGG...GTATCCCTTCTTTATGCCCTGACATGCTAGCCTGCTAAGTAGTTTCTTCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CAA 90 bp | AGCCACCCACCCCTTCTAGCTTTCTTTACAATGCAGTGGCACCCTGTCACTACTATGGGGAAGGCACTCTaGAGAGGCAGGTTAGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SHPPLLAFFTMQWHPVTTMGKAL*RGRLVN Trigger: GTTTACTAACCTGCCTCTCAAGAGTGCCTTCCCCAT...AGTAGTGACAGGGTGCCACTGCATTGTAAAGAAAGCTAGAAGGGGTGGGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CAA 90 bp | TCATGCTTTGTACCCATAATCCACCACTGTAATGCTGTAGGGGCAGAGAGGACACCAGCTCCCTCTTCCTaGTATGGGTTGATTCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: SCFVPIIHHCNAVGAERTPAPSS*YGLIPR Trigger: TCGTGGAATCAACCCATACAAGGAAGAGGGAGCTGG...TGTCCTCTCTGCCCCTACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CAA 90 bp | TCATGCTTTGTACCCATAATCCACCACTGTAATGCTGTAGGGGCAGAGAGGACATCAATGATGCCCCTTTaGATGCCCTGCAGTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SCFVPIIHHCNAVGAERTSMMPL*MPCSSS Trigger: GGATGAACTGCAGGGCATCAAAAGGGGCATCATTGA...TGTCCTCTCTGCCCCTACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS CCA 90 bp | TGTTCTTTATCAGAAAGTCCTTCTGTGTGGTCCTTCAAGGTTGCCTaGACACATAATGTTCTCCTGAAGCCGTCAGACAGTAGCACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSLSESPSVWSFKVA*THNVLLKPSDSSTL Trigger: GAGGGTGCTACTGTCTGACGGCTTCAGGAGAACATTATGTGTCCAGGCAACCTTGAAGGACCACACAGAAGGACTTTCTGATAAAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
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| CDS-3UTR CAA 90 bp | TCATGCTTTGTACCCATAATCCACCACTGTAATGCTGTAGGGGCAGAGAGGACAAGGCATTCATATCTCTaGACAGCTCAATCATCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCFVPIIHHCNAVGAERTRHSYL*TAQSSG Trigger: CCCGGATGATTGAGCTGTCAAGAGATATGAATGCCT...TGTCCTCTCTGCCCCTACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CAA 90 bp | TCATGCTTTGTACCCATAATCCACCACTGTAATGCTGTAGGGGCAGAGAGGACAACACAATGGCTTCATTaGTGGTCCTTGTCACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCFVPIIHHCNAVGAERTTQWLH*WSLSLL Trigger: GAGGAGTGACAAGGACCACAAATGAAGCCATTGTGT...TGTCCTCTCTGCCCCTACAGCATTACAGTGGTGGATTATGGGTACAAAGCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CAA 90 bp | GATAAGAGAATTGGTAAACGTGGAGAACTAATTTTCCTAACTTGCTTGTCTGGTGCTCACGTACTCTGCTaGGATCCTGCGGGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DKRIGKRGELIFLTCLSGAHVLC*DPAGWH Trigger: GTGCCAGCCCGCAGGATCCAAGCAGAGTACGTGAGC...ACCAGACAAGCAAGTTAGGAAAATTAGTTCTCCACGTTTACCAATTCTCTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAGAAACTACTTAGCAGGCTAGCATGTCAGGGCATAAAGAAGGGATACAAATGCGAATCACCTTaGGCCTCCAGACTTCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEKKLLSRLACQGIKKGYKCESP*ASRLPS Trigger: GCTCGGAAGTCTGGAGGCCAAAGGTGATTCGCATTT...GTATCCCTTCTTTATGCCCTGACATGCTAGCCTGCTAAGTAGTTTCTTCTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS GCA 90 bp | CCACTGGTGCAAGAAGATGGATCCACAGCTAGCACAGATAACCTGTaGCCTTGCTCAGTCAGCATTTTCCCAAAACATTCTATGAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLVQEDGSTASTDNL*PCSVSIFPKHSMNV Trigger: AACATTCATAGAATGTTTTGGGAAAATGCTGACTGAGCAAGGGCACAGGTTATCTGTGCTAGCTGTGGATCCATCTTCTTGCACCAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS-3UTR CAA 90 bp | AGCCAAGTGGAGTTTAAAAACTGGACTCACATCATTCCAGGTGTCTTGTTACAACCCACTGGCCAGCATTaGGTGCTGAAACTCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQVEFKNWTHIIPGVLLQPTGQH*VLKLSH Trigger: ATGAGAGAGTTTCAGCACCAAATGCTGGCCAGTGGG...TTGTAACAAGACACCTGGAATGATGTGAGTCCAGTTTTTAAACTCCACTTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS CCA 90 bp | AGTCTATCCACAAATCTTTGTTCTTTATCAGAAAGTCCTTCTGTGTaGTCCTTCAAGGTTGCCTGGACACATAATGTTCTCCTGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLSTNLCSLSESPSV*SFKVAWTHNVLLKP Trigger: CGGCTTCAGGAGAACATTATGTGTCCAGGCAACCTTGAAGGACCACACAGAAGGACTTTCTGATAAAGAACAAAGATTTGTGGATAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
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| CDS GCA 90 bp | GTGCAAGAAGATGGATCCACAGCTAGCACAGATAACCTGTGCCCTTaGTCAGTCAGCATTTTCCCAAAACATTCTATGAATGTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VQEDGSTASTDNLCP*SVSIFPKHSMNVDF Trigger: AAAATCAACATTCATAGAATGTTTTGGGAAAATGCTGACTGAGCAAGGGCACAGGTTATCTGTGCTAGCTGTGGATCCATCTTCTTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS TCA 72 bp | CTGCACCAGGGGGCCCGGACAGTCCTACTCGAAATGTaGGGGGCTTTCCTTGGTTCCGCAGCTCCTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LHQGARTVLLEM*GAFLGSAAPAP Trigger: GGGAGCAGGAGCTGCGGAACCAAGGAAAGCCCCTCACATTTCGAGTAGGACTGTCCGGGCCCCCTGGTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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| CDS CCA 72 bp | GGGCCCGGACAGTCTCGAAATGTGAGGGGCTTTCCTTaGTTCCGCAGCTCCTGCTCCCGCTGGAGGGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGQSRNVRGFP*FRSSCSRWRAK Trigger: CTTAGCCCTCCAGCGGGAGCAGGAGCTGCGGAACCAAGGAAAGCCCCTCACATTTCGAGACTGTCCGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
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| CDS TCA 72 bp | TTTCCTGCACCAGGGGGCCCGGACAGTCTCGAAATGTaGGGGGCTTTCCTTGGTTCCGCAGCTCCTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPAPGGPDSLEM*GAFLGSAAPAP Trigger: GGGAGCAGGAGCTGCGGAACCAAGGAAAGCCCCTCACATTTCGAGACTGTCCGGGCCCCCTGGTGCAGGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210231.2 |
||
| CDS CCA 72 bp | CCGGACAGTCCTACTCGAAATGTGAGGGGCTTTCCTTaGTTCCGCAGCTCCTGCTCCCGCTGGAGGGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PDSPTRNVRGFP*FRSSCSRWRAK Trigger: CTTAGCCCTCCAGCGGGAGCAGGAGCTGCGGAACCAAGGAAAGCCCCTCACATTTCGAGTAGGACTGTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS CAA 72 bp | TTGGCAGAGCACCTGGGGGTCCCGGTGCAGGGTGACTaGAGTGAAGGAGCCATGGGGAAGGCACTCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LAEHLGVPVQGD*SEGAMGKALLR Trigger: TCTCAAGAGTGCCTTCCCCATGGCTCCTTCACTCAAGTCACCCTGCACCGGGACCCCCAGGTGCTCTGCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
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| CDS TCA 72 bp | TCCCGCTGGAGGGCTAAGACTCTCTGCAGAAGCACCTaGGCCAGCTCCCTCTTCCTTGTATGGGTTGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRWRAKTLCRST*ASSLFLVWVDS Trigger: GGAATCAACCCATACAAGGAAGAGGGAGCTGGCTCAGGTGCTTCTGCAGAGAGTCTTAGCCCTCCAGCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
||
| CDS CAA 90 bp | CTCTCTGCAGAAGCACCTGAGCCAGCTCCCTCTTCCTTGTATGGGTaGATTCCACGAGAGTTATGGCCTCCGCTAGGCAAGCTCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSAEAPEPAPSSLYG*IPRELWPPLGKLSV Trigger: GACAGAGAGCTTGCCTAGCGGAGGCCATAACTCTCGTGGAATCAACCCATACAAGGAAGAGGGAGCTGGCTCAGGTGCTTCTGCAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
||
| CDS CAA 72 bp | GAAGCACCTGAGCCAGCTCCCTCTTCCTTGTATGGGTaGATTCCACGAGAGTTATGGCCTCCGCTAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: EAPEPAPSSLYG*IPRELWPPLGK Trigger: CTTGCCTAGCGGAGGCCATAACTCTCGTGGAATCAACCCATACAAGGAAGAGGGAGCTGGCTCAGGTGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
||
| CDS CCA 72 bp | CCCTCTTCCTTGTATGGGTTGATTCCACGAGAGTTATaGCCTCCGCTAGGCAAGCTCTCTGTCCTTTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: PSSLYGLIPREL*PPLGKLSVLSL Trigger: TAGTGAAAGGACAGAGAGCTTGCCTAGCGGAGGCCATAACTCTCGTGGAATCAACCCATACAAGGAAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
||
| CDS CCA 72 bp | TCAGAAAGTCCTTCTGTGTGGTCCTTCAAGGTTGCCTaGACACATAATGTTCTCCTGAAGCCGTCAGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: SESPSVWSFKVA*THNVLLKPSDS Trigger: ACTGTCTGACGGCTTCAGGAGAACATTATGTGTCCAGGCAACCTTGAAGGACCACACAGAAGGACTTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048718.4 ENSMUST00000210231.2 |
||
| CDS GCA 72 bp | CAAGAAGATGGATCCACAGCTAGCACAGATAACCTGTaGCCTTGCTCAGTCAGCATTTTCCCAAAACATTCT | + |
|
Preference number: 6 (lower is better) Translates to: QEDGSTASTDNL*PCSVSIFPKHS Trigger: AGAATGTTTTGGGAAAATGCTGACTGAGCAAGGGCACAGGTTATCTGTGCTAGCTGTGGATCCATCTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
||
| CDS GCA 72 bp | GATGGATCCACAGCTAGCACAGATAACCTGTGCCCTTaGTCAGTCAGCATTTTCCCAAAACATTCTATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: DGSTASTDNLCP*SVSIFPKHSMN Trigger: ATTCATAGAATGTTTTGGGAAAATGCTGACTGAGCAAGGGCACAGGTTATCTGTGCTAGCTGTGGATCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048718.4 |
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