Pregenerated sensors for MLYCD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074064Ensembl transcript IDs: ENSMUST00000098367.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGCCTCCTAGCAGTGAGTGGGCCACCACAGTGACAGCCAAGGTGTaGCCTCCTGAGTGCCTGCTGAGGTCAGAGGACAGCACCGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PPPSSEWATTVTAKV*PPECLLRSEDSTAV Trigger: CACAGCGGTGCTGTCCTCTGACCTCAGCAGGCACTCAGGAGGCCACACCTTGGCTGTCACTGTGGTGGCCCACTCACTGCTAGGAGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR GCA 90 bp | AGTGAGTGGGCCACCACAGTGACAGCCAAGGTGTGGCCTCCTGAGTaGCTGCTGAGGTCAGAGGACAGCACCGCTGTGGCCTCCCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SEWATTVTAKVWPPE*LLRSEDSTAVASLK Trigger: TTTCAGGGAGGCCACAGCGGTGCTGTCCTCTGACCTCAGCAGGCACTCAGGAGGCCACACCTTGGCTGTCACTGTGGTGGCCCACTCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR CCA 90 bp | GAGAACATGACTGTCAGCTCTTCATACTCCAAAAGGTCTGTGCTCTaGGCTGTGTCCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: ENMTVSSSYSKRSVL*AVSWVACGGICRAF Trigger: GAAAGCTCTACAGATGCCACCACAGGCCACCCAGGACACAGCCCAGAGCACAGACCTTTTGGAGTATGAAGAGCTGACAGTCATGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR TCA 90 bp | TTAATGCTTACAGAACAAATCTGTTCTTTACCGTTCAGTTCATTATaGACTGGGATCTCATTTAAACCCTGTAAGCCAACTCTGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LMLTEQICSLPFSSL*TGISFKPCKPTLAS Trigger: TGAGGCCAGAGTTGGCTTACAGGGTTTAAATGAGATCCCAGTTCATAATGAACTGAACGGTAAAGAACAGATTTGTTCTGTAAGCATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR-3UTR GCA 90 bp | CCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGTGGGCCACCAGTGTGGCCTCCTGAGTaGCTGCTGAGGTCAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PEPQHPVRHRLLAVSGPPVWPPE*LLRSED Trigger: GTCCTCTGACCTCAGCAGGCACTCAGGAGGCCACAC...TGGTGGCCCACTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR-3UTR TCA 90 bp | CATTATGAACTGGGATCTCATTTAAACCCTGTAAGCCAACTCTGGCCTCAAGCAAGTGGGCCACCACAGTaGCAGCCAAGGTGTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HYELGSHLNPVSQLWPQASGPPQ*QPRCGL Trigger: GAGGCCACACCTTGGCTGTCACTGTGGTGGCCCACT...TGCTTGAGGCCAGAGTTGGCTTACAGGGTTTAAATGAGATCCCAGTTCATAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR-3UTR CCA 90 bp | TGCTTACAGAACAAATCTGTTCTTTACCGTTCAGTTCATTATGAACTGGGATCTCTCTGGGCTGTGTCCTaGGTGGCCTGTGGTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: CLQNKSVLYRSVHYELGSLWAVS*VACGGI Trigger: GATGCCACCACAGGCCACCCAGGACACAGCCCAGAG...AGATCCCAGTTCATAATGAACTGAACGGTAAAGAACAGATTTGTTCTGTAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR-3UTR GCA 90 bp | TGCTTACAGAACAAATCTGTTCTTTACCGTTCAGTTCATTATGAACTGGGATCTACTCCAAAAGGTCTGTaGTCTGGGCTGTGTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: CLQNKSVLYRSVHYELGSTPKGL*SGLCPG Trigger: CCCAGGACACAGCCCAGAGCACAGACCTTTTGGAGT...AGATCCCAGTTCATAATGAACTGAACGGTAAAGAACAGATTTGTTCTGTAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR CCA 72 bp | ACTCCAAAAGGTCTGTGCTCTGGGCTGTGTCCTGGGTaGCCTGTGGTGGCATCTGTAGAGCTTTCTGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: TPKGLCSGLCPG*PVVASVELSEG Trigger: GCCTTCAGAAAGCTCTACAGATGCCACCACAGGCCACCCAGGACACAGCCCAGAGCACAGACCTTTTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| 3UTR CCA 72 bp | ACTGTCAGCTCTTCATACTCCAAAAGGTCTGTGCTCTaGGCTGTGTCCTGGGTGGCCTGTGGTGGCATCTGT | + |
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Preference number: 3 (lower is better) Translates to: TVSSSYSKRSVL*AVSWVACGGIC Trigger: ACAGATGCCACCACAGGCCACCCAGGACACAGCCCAGAGCACAGACCTTTTGGAGTATGAAGAGCTGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | AGTGGGATCCCCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGGCCTGCTGGCGCAGCTaGAGCACCCCGGCGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SGIPGTPAPSPPPPPSSEACWRS*STPALC Trigger: GCAGAGCGCCGGGGTGCTGCAGCTGCGCCAGCAGGC...CTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGGGGATCCCACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | ATCCCCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGTGGGCCCCGAGCTCCACCCCCTaGAGGCCCTGCTGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IPGTPAPSPPPPPSSEWAPSSTP*RPCWVR Trigger: CCTGACCCAGCAGGGCCTGCAGGGGGTGGAGCTCGG...GGCCCACTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGGGGAT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CCA 90 bp | AGTGGGATCCCCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGCTCTGCTCGGCCACCTaGCCGTGGTCCACGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGIPGTPAPSPPPPPSSELCSAT*PWSTPK Trigger: CTTCGGCGTGGACCACGGCCAGGTGGCCGAGCAGAG...CTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGGGGATCCCACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | ATCCCCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGTGGGCCACCTCACAGGGTGAGTaGCAGGTGACCCGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IPGTPAPSPPPPPSSEWATSQGE*QVTRSR Trigger: CCTGGAGCGGGTCACCTGGCACTCACCCTGTGAGGT...GGCCCACTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGGGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | ATCCCCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGTGGGCCGGCCCCTGCAGCGCCTaGGTCAGCTTCTCTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: IPGTPAPSPPPPPSSEWAGPCSA*VSFSDF Trigger: GAAGTCAGAGAAGCTGACGCAGGCGCTGCAGGGGCC...GGCCCACTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGGGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | AGGTCTGTGCTCTGGGCTGTGTCCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTAGCACCCCGGCGCTCTaGTCGGCCACCTGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: RSVLWAVSWVACGGICRASTPAL*SATWPW Trigger: CCACGGCCAGGTGGCCGAGCAGAGCGCCGGGGTGCT...AGCTCTACAGATGCCACCACAGGCCACCCAGGACACAGCCCAGAGCACAGACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR TCA 90 bp | CCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTTTCTGAAGGCACAGGCTGTGGGCGCCGTCCAGCTTGCTaGTGTGATGGAAGAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PGWPVVASVELSEGTGCGRRPAC*CDGRGR Trigger: GCGGCCTCTTCCATCACATCAGCAAGCTGGACGGCG...CCCACAGCCTGTGCCTTCAGAAAGCTCTACAGATGCCACCACAGGCCACCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CCA 90 bp | GTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCAAGCTTTGCAGCAGCTCGTCCATaGCGCTGGCCGCGAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: VSLAHQNTASFLRRGPSFAAARP*RWPRAR Trigger: GCGGGCTCGCGGCCAGCGCCATGGACGAGCTGCTGC...AAAGCTTGGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR TCA 90 bp | GTCAGAGGACAGCACCGCTGTGGCCTCCCTGAAAAGGATTCTGTGGTAAGTAAGGCCCCTCCACCAGCTTaGGGGCCTGCGCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VRGQHRCGLPEKDSVVSKAPPPA*GPAPPA Trigger: TGCTGGAGGCGCAGGCCCTCAAGCTGGTGGAGGGGC...CTTACTTACCACAGAATCCTTTTCAGGGAGGCCACAGCGGTGCTGTCCTCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | GGTCTGTGCTCTGGGCTGTGTCCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTTCCATGCTCCTTCCCCTaGACATTCAGGAGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLCSGLCPGWPVVASVELPCSFP*TFRRPS Trigger: GCTGGGCCTCCTGAATGTGCAGGGGAAGGAGCATGG...AAGCTCTACAGATGCCACCACAGGCCACCCAGGACACAGCCCAGAGCACAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | AGTGGGATCCCCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGATCACAGCCCCATTCTaGAGATGGAAGTTGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SGIPGTPAPSPPPPPSSEITAPF*RWKLAT Trigger: AGTGGCCAACTTCCATCTGCAGAATGGGGCTGTGAT...CTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGGGGATCCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | GTGGTAAGTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCACCCCCTGCAGGCCCTaGTGGGTCAGGCTGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: VVSKPGPSEHSLLSKKGPTPCRP*WVRLME Trigger: CTCCATCAGCCTGACCCAGCAGGGCCTGCAGGGGGT...GGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTACTTACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CCA 90 bp | CCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTTTCTGAAGGCACAGGCTGTGGGATGGAAGTTGGCCACTaGGTTGAGGGCGTAGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: PGWPVVASVELSEGTGCGMEVGH*VEGVAS Trigger: CGAGGCTACGCCCTCAACCCAGTGGCCAACTTCCAT...CCCACAGCCTGTGCCTTCAGAAAGCTCTACAGATGCCACCACAGGCCACCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR TCA 90 bp | AGGTCTGTGCTCTGGGCTGTGTCCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTTCCAGCTTGCTGATGTaGTGGAAGAGGCCGCGATAC | + |
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Preference number: 4 (lower is better) Translates to: RSVLWAVSWVACGGICRASSLLM*WKRPRY Trigger: GTATCGCGGCCTCTTCCATCACATCAGCAAGCTGGA...AGCTCTACAGATGCCACCACAGGCCACCCAGGACACAGCCCAGAGCACAGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR TCA 90 bp | GGTCTGTGCTCTGGGCTGTGTCCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTTGAAAAGGCCCCCAGCTaGGGAAATTCCTTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLCSGLCPGWPVVASVELEKAPS*GNSFCS Trigger: GCTGCAGAAGGAATTTCCTCAGCTGGGGGCCTTTTC...AAGCTCTACAGATGCCACCACAGGCCACCCAGGACACAGCCCAGAGCACAGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | AGTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCAAGCTTAGATCGGCCCGCAGCTaGACCAAGAAGCGCACGCCG | + |
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Preference number: 4 (lower is better) Translates to: SKPGPSEHSLLSKKGPKLRSARS*TKKRTP Trigger: CGGCGTGCGCTTCTTGGTGCAGCTGCGGGCCGATCT...AAGCTTGGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR TCA 90 bp | GTGGTAAGTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCGATAGGCGACAGGCTTaGAAAGGCCCCCAGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VVSKPGPSEHSLLSKKGPDRRQA*KGPQLR Trigger: CCTCAGCTGGGGGCCTTTTCAAGCCTGTCGCCTATC...GGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTACTTACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | ACTGTCAGCTCTTCATACTCCAAAAGGTCTGTGCTCTGGGCTGTGTCCTGGGTGTTCATTTCCCGGACGTaGGGCCCCTCCACCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TVSSSYSKRSVLWAVSWVFISRT*GPSTSL Trigger: CAAGCTGGTGGAGGGGCCGCACGTCCGGGAAATGAA...CACCCAGGACACAGCCCAGAGCACAGACCTTTTGGAGTATGAAGAGCTGACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | GTGGTAAGTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCCCAGTCAGAGCCACATaGAGAACCACCAGGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VVSKPGPSEHSLLSKKGPPVRAT*RTTRGS Trigger: GGAACCCCTGGTGGTTCTGCATGTGGCTCTGACTGG...GGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTACTTACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR TCA 90 bp | CATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCAAGCTTTGGGAAGGCTGTCTGCTCAGGAACCCCTTaGGGCTCTCGTGAACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: HQNTASFLRRGPSFGKAVCSGTP*GSREQG Trigger: ACCCTGTTCACGAGAGCCTCAAGGGGTTCCTGAGCA...GACAGCCTTCCCAAAGCTTGGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR TCA 90 bp | GTCAGAGGACAGCACCGCTGTGGCCTCCCTGAAAAGGATTCTGTGGTAAGTAAGTGTCAGCCATCCAGTTaGTACGCCACATCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VRGQHRCGLPEKDSVVSKCQPSS*YATSQP Trigger: GGGCTGTGATGTGGCGTATCAACTGGATGGCTGACA...CTTACTTACCACAGAATCCTTTTCAGGGAGGCCACAGCGGTGCTGTCCTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR TCA 90 bp | GTCAGAGGACAGCACCGCTGTGGCCTCCCTGAAAAGGATTCTGTGGTAAGTAAGCACTCGCTGATCTTCTaGAGTACCTCACAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VRGQHRCGLPEKDSVVSKHSLIF*STSQGE Trigger: CTCACCCTGTGAGGTACTTCAGAAGATCAGCGAGTG...CTTACTTACCACAGAATCCTTTTCAGGGAGGCCACAGCGGTGCTGTCCTCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CCA 90 bp | AGTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCAAGCTTCTGTTGTTCTGGAACTaGGCTACCAGGCTGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: SKPGPSEHSLLSKKGPKLLLFWN*ATRLRI Trigger: GATCCTCAGCCTGGTAGCCCAGTTCCAGAACAACAG...AAGCTTGGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | GTGGTAAGTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCGGCACTCCTTCACAATaGCCTGGATGTTGTTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VVSKPGPSEHSLLSKKGPGTPSQ*PGCCWK Trigger: TTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCC...GGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTACTTACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CCA 90 bp | TCTGTTCTTTACCGTTCAGTTCATTATGAACTGGGATCTCATTTAAACCCTGTAGCCCCATTCTGCAGATaGAAGTTGGCCACTGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SVLYRSVHYELGSHLNPVAPFCR*KLATGL Trigger: CAACCCAGTGGCCAACTTCCATCTGCAGAATGGGGC...TACAGGGTTTAAATGAGATCCCAGTTCATAATGAACTGAACGGTAAAGAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR GCA 90 bp | TGCTTACAGAACAAATCTGTTCTTTACCGTTCAGTTCATTATGAACTGGGATCTCAGTTTTTCACAGGGTaGACAGCCTCACACTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: CLQNKSVLYRSVHYELGSQFFTG*TASHSL Trigger: CAGCGAGTGTGAGGCTGTGCACCCTGTGAAAAACTG...AGATCCCAGTTCATAATGAACTGAACGGTAAAGAACAGATTTGTTCTGTAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 90 bp | CCGGCGCTCTGCTCGGCCACCTGGCCGTGGTCCACGCCGAAGCCCTaGGCCAGGCGGCCGAGCAGCTCGGCGCGCTGGGACGCCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: PALCSATWPWSTPKP*ARRPSSSARWDASA Trigger: GGCCGAGGCGTCCCAGCGCGCCGAGCTGCTCGGCCGCCTGGCTCAGGGCTTCGGCGTGGACCACGGCCAGGTGGCCGAGCAGAGCGCCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 90 bp | TCCGCCTGCAGCAGCACGGCCGCCTCGCGCGCCTGCTGGCGCAGCTaGAGCACCCCGGCGCTCTGCTCGGCCACCTGGCCGTGGTCCACG | + |
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Preference number: 5 (lower is better) Translates to: SACSSTAASRACWRS*STPALCSATWPWST Trigger: CGTGGACCACGGCCAGGTGGCCGAGCAGAGCGCCGGGGTGCTGCAGCTGCGCCAGCAGGCGCGCGAGGCGGCCGTGCTGCTGCAGGCGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 90 bp | CGGCCCGCAGCTGCACCAAGAAGCGCACGCCGCCGTCCAGCTTGCTaGTGTGATGGAAGAGGCCGCGATACCGCGGCACGAGCGCGTAGC | + |
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Preference number: 5 (lower is better) Translates to: RPAAAPRSARRRPAC*CDGRGRDTAARARS Trigger: GCTACGCGCTCGTGCCGCGGTATCGCGGCCTCTTCCATCACATCAGCAAGCTGGACGGCGGCGTGCGCTTCTTGGTGCAGCTGCGGGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 90 bp | CCGTTCATTTCCCGGACGTGCGGCCCCTCCACCAGCTTGAGGGCCTaGGCCTCCAGCAGATCGGCCCGCAGCTGCACCAAGAAGCGCACG | + |
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Preference number: 5 (lower is better) Translates to: PFISRTCGPSTSLRA*ASSRSARSCTKKRT Trigger: CGTGCGCTTCTTGGTGCAGCTGCGGGCCGATCTGCTGGAGGCGCAGGCCCTCAAGCTGGTGGAGGGGCCGCACGTCCGGGAAATGAACGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CAA 90 bp | AGGTCTGTGCTCTGGGCTGTGTCCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTGGCCCCTCCACCAGCTaGAGGGCCTGCGCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RSVLWAVSWVACGGICRAGPSTS*RACASS Trigger: GCTGGAGGCGCAGGCCCTCAAGCTGGTGGAGGGGCC...AGCTCTACAGATGCCACCACAGGCCACCCAGGACACAGCCCAGAGCACAGACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CAA 90 bp | CCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGTGGGCCACCATTCTGCAGATGGAAGTaGGCCACTGGGTTGAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PEPQHPVRHRLLAVSGPPFCRWK*ATGLRA Trigger: CGCCCTCAACCCAGTGGCCAACTTCCATCTGCAGAA...TGGTGGCCCACTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CAA 90 bp | ATCCCCGGAACCCCAGCACCCAGTCCGCCACCGCCTCCTAGCAGTGAGTGGGCCACAATGCCCTGGATGTaGTTGGAAATGTCACCAGTC | + |
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Preference number: 5 (lower is better) Translates to: IPGTPAPSPPPPPSSEWATMPWM*LEMSPV Trigger: GACTGGTGACATTTCCAACAACATCCAGGGCATTGT...GGCCCACTCACTGCTAGGAGGCGGTGGCGGACTGGGTGCTGGGGTTCCGGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 90 bp | GTGCACAGCCTCACACTCGCTGATCTTCTGAAGTACCTCACAGGGTaGGTGCCAGGTGACCCGCTCCAGGTTCAGGAAGCCGGAGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: VHSLTLADLLKYLTG*VPGDPLQVQEAGGE Trigger: TTCTCCTCCGGCTTCCTGAACCTGGAGCGGGTCACCTGGCACTCACCCTGTGAGGTACTTCAGAAGATCAGCGAGTGTGAGGCTGTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 90 bp | TACAGGTACCAGGCACACAGCCTCATTAGTGGCCCCTGCAGCGCCTaGGTCAGCTTCTCTGACTTCACCCACTCACCACTGCTCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: YRYQAHSLISGPCSA*VSFSDFTHSPLLRN Trigger: GTTCCTGAGCAGTGGTGAGTGGGTGAAGTCAGAGAAGCTGACGCAGGCGCTGCAGGGGCCACTAATGAGGCTGTGTGCCTGGTACCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 90 bp | TTCTCACCGTACAGGTACCAGGCACACAGCCTCATTAGTGGCCCCTaGAGCGCCTGCGTCAGCTTCTCTGACTTCACCCACTCACCACTG | + |
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Preference number: 5 (lower is better) Translates to: FSPYRYQAHSLISGP*SACVSFSDFTHSPL Trigger: CAGTGGTGAGTGGGTGAAGTCAGAGAAGCTGACGCAGGCGCTGCAGGGGCCACTAATGAGGCTGTGTGCCTGGTACCTGTACGGTGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 90 bp | GCCTGTCTCCTCCAGGTAGTAGCGGTAGTTGACCATGAGGCCGCATaGGCTGGTGAGGCCTTTGAGGCTGCTGTCAGCCATCCAGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: ACLLQVVAVVDHEAA*AGEAFEAAVSHPVD Trigger: ATCAACTGGATGGCTGACAGCAGCCTCAAAGGCCTCACCAGCTCATGCGGCCTCATGGTCAACTACCGCTACTACCTGGAGGAGACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CCA 90 bp | GATACGCCACATCACAGCCCCATTCTGCAGATGGAAGTTGGCCACTaGGTTGAGGGCGTAGCCTCGGTGCTTCTCACCGTACAGGTACCA | + |
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Preference number: 5 (lower is better) Translates to: DTPHHSPILQMEVGH*VEGVASVLLTVQVP Trigger: TGGTACCTGTACGGTGAGAAGCACCGAGGCTACGCCCTCAACCCAGTGGCCAACTTCCATCTGCAGAATGGGGCTGTGATGTGGCGTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 90 bp | GACTTCACCCACTCACCACTGCTCAGGAACCCCTTGAGGCTCTCGTaGACAGGGTTGCCGGTAACCGCTGAGATTTCTTGGCACTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DFTHSPLLRNPLRLS*TGLPVTAEISWHSE Trigger: CTCAGAGTGCCAAGAAATCTCAGCGGTTACCGGCAACCCTGTTCACGAGAGCCTCAAGGGGTTCCTGAGCAGTGGTGAGTGGGTGAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CAA 90 bp | AGTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCAAGCTTAGGCCCAGCAGCCACTaGGTGAATCCAGGGATAGGC | + |
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Preference number: 5 (lower is better) Translates to: SKPGPSEHSLLSKKGPKLRPSSH*VNPGIG Trigger: GCCTATCCCTGGATTCACCAAGTGGCTGCTGGGCCT...AAGCTTGGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CAA 90 bp | GTCAGAGGACAGCACCGCTGTGGCCTCCCTGAAAAGGATTCTGTGGTAAGTAAGGAGCTGGTGAGGCCTTaGAGGCTGCTGTCAGCCATC | + |
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Preference number: 5 (lower is better) Translates to: VRGQHRCGLPEKDSVVSKELVRP*RLLSAI Trigger: GATGGCTGACAGCAGCCTCAAAGGCCTCACCAGCTC...CTTACTTACCACAGAATCCTTTTCAGGGAGGCCACAGCGGTGCTGTCCTCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 90 bp | ATCCAGTTTTTCACAGGGTGCACAGCCTCACACTCGCTGATCTTCTaGAGTACCTCACAGGGTGAGTGCCAGGTGACCCGCTCCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: IQFFTGCTASHSLIF*STSQGECQVTRSRF Trigger: GAACCTGGAGCGGGTCACCTGGCACTCACCCTGTGAGGTACTTCAGAAGATCAGCGAGTGTGAGGCTGTGCACCCTGTGAAAAACTGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CAA 90 bp | CCTGGGTGGCCTGTGGTGGCATCTGTAGAGCTTTCTGAAGGCACAGGCTGTGGGATGCCCTGGATGTTGTaGGAAATGTCACCAGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PGWPVVASVELSEGTGCGMPWML*EMSPVR Trigger: TCTGACTGGTGACATTTCCAACAACATCCAGGGCAT...CCCACAGCCTGTGCCTTCAGAAAGCTCTACAGATGCCACCACAGGCCACCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CCA 90 bp | CGGTTTCAGTCGGAGGGCACTCCTTCACAATGCCCTGGATGTTGTTaGAAATGTCACCAGTCAGAGCCACATGCAGAACCACCAGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: RFQSEGTPSQCPGCC*KCHQSEPHAEPPGV Trigger: AACCCCTGGTGGTTCTGCATGTGGCTCTGACTGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGACTGAAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CAA 90 bp | GTCAGAGGACAGCACCGCTGTGGCCTCCCTGAAAAGGATTCTGTGGTAAGTAAGCTGTCAGCCATCCAGTaGATACGCCACATCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: VRGQHRCGLPEKDSVVSKLSAIQ*IRHITA Trigger: GGCTGTGATGTGGCGTATCAACTGGATGGCTGACAG...CTTACTTACCACAGAATCCTTTTCAGGGAGGCCACAGCGGTGCTGTCCTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 90 bp | TCCTGTTCCTCTCCTCGGTTTCAGTCGGAGGGCACTCCTTCACAATaGCCTGGATGTTGTTGGAAATGTCACCAGTCAGAGCCACATGCA | + |
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Preference number: 5 (lower is better) Translates to: SCSSPRFQSEGTPSQ*PGCCWKCHQSEPHA Trigger: TGCATGTGGCTCTGACTGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGACTGAAACCGAGGAGAGGAACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CCA 90 bp | TTCCTCTCCTCGGTTTCAGTCGGAGGGCACTCCTTCACAATGCCCTaGATGTTGTTGGAAATGTCACCAGTCAGAGCCACATGCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: FLSSVSVGGHSFTMP*MLLEMSPVRATCRT Trigger: GGTTCTGCATGTGGCTCTGACTGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGACTGAAACCGAGGAGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS-3UTR CAA 90 bp | GTAAGCCTGGCCCATCAGAACACAGCCTCCTTTCTAAGAAGGGGCCCAAGCTTTATCTGCTCGGAAGCTTaGATGTTCTTGGAGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VSLAHQNTASFLRRGPSFICSEA*MFLEPR Trigger: CCTGGGCTCCAAGAACATCAAAGCTTCCGAGCAGAT...AAAGCTTGGGCCCCTTCTTAGAAAGGAGGCTGTGTTCTGATGGGCCAGGCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 90 bp | TTGGTGAATCCAGGGATAGGCGACAGGCTTGAAAAGGCCCCCAGCTaGGGAAATTCCTTCTGCAGCTCCTTGACCACTCTCTTTATGAGG | + |
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Preference number: 5 (lower is better) Translates to: LVNPGIGDRLEKAPS*GNSFCSSLTTLFMR Trigger: CCTCATAAAGAGAGTGGTCAAGGAGCTGCAGAAGGAATTTCCTCAGCTGGGGGCCTTTTCAAGCCTGTCGCCTATCCCTGGATTCACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 72 bp | AGCAGCACGGCCGCCTCGCGCGCCTGCTGGCGCAGCTaGAGCACCCCGGCGCTCTGCTCGGCCACCTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SSTAASRACWRS*STPALCSATWP Trigger: CGGCCAGGTGGCCGAGCAGAGCGCCGGGGTGCTGCAGCTGCGCCAGCAGGCGCGCGAGGCGGCCGTGCTGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 72 bp | TTGAGGGCCTGCGCCTCCAGCAGATCGGCCCGCAGCTaGACCAAGAAGCGCACGCCGCCGTCCAGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRACASSRSARS*TKKRTPPSSLL Trigger: CAGCAAGCTGGACGGCGGCGTGCGCTTCTTGGTGCAGCTGCGGGCCGATCTGCTGGAGGCGCAGGCCCTCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 72 bp | ACCAAGAAGCGCACGCCGCCGTCCAGCTTGCTGATGTaGTGGAAGAGGCCGCGATACCGCGGCACGAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: TKKRTPPSSLLM*WKRPRYRGTSA Trigger: CGCGCTCGTGCCGCGGTATCGCGGCCTCTTCCATCACATCAGCAAGCTGGACGGCGGCGTGCGCTTCTTGGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 72 bp | GCTGCACCAAGAAGCGCACGCCGCCGTCCAGCTTGCTaGTGTGATGGAAGAGGCCGCGATACCGCGGCACGA | + |
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Preference number: 6 (lower is better) Translates to: AAPRSARRRPAC*CDGRGRDTAAR Trigger: TCGTGCCGCGGTATCGCGGCCTCTTCCATCACATCAGCAAGCTGGACGGCGGCGTGCGCTTCTTGGTGCAGC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 72 bp | AGCATGCTTTTGAGCACTCCGTTCATTTCCCGGACGTaGGGCCCCTCCACCAGCTTGAGGGCCTGCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SMLLSTPFISRT*GPSTSLRACAS Trigger: GGAGGCGCAGGCCCTCAAGCTGGTGGAGGGGCCGCACGTCCGGGAAATGAACGGAGTGCTCAAAAGCATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS GCA 72 bp | TACAGGTACCAGGCACACAGCCTCATTAGTGGCCCCTaGAGCGCCTGCGTCAGCTTCTCTGACTTCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: YRYQAHSLISGP*SACVSFSDFTH Trigger: GTGGGTGAAGTCAGAGAAGCTGACGCAGGCGCTGCAGGGGCCACTAATGAGGCTGTGTGCCTGGTACCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CAA 90 bp | CCGCATGAGCTGGTGAGGCCTTTGAGGCTGCTGTCAGCCATCCAGTaGATACGCCACATCACAGCCCCATTCTGCAGATGGAAGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PHELVRPLRLLSAIQ*IRHITAPFCRWKLA Trigger: GGCCAACTTCCATCTGCAGAATGGGGCTGTGATGTGGCGTATCAACTGGATGGCTGACAGCAGCCTCAAAGGCCTCACCAGCTCATGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 72 bp | CTCACACTCGCTGATCTTCTGAAGTACCTCACAGGGTaGGTGCCAGGTGACCCGCTCCAGGTTCAGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LTLADLLKYLTG*VPGDPLQVQEA Trigger: GGCTTCCTGAACCTGGAGCGGGTCACCTGGCACTCACCCTGTGAGGTACTTCAGAAGATCAGCGAGTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 72 bp | CTCCAGGTAGTAGCGGTAGTTGACCATGAGGCCGCATaGGCTGGTGAGGCCTTTGAGGCTGCTGTCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LQVVAVVDHEAA*AGEAFEAAVSH Trigger: ATGGCTGACAGCAGCCTCAAAGGCCTCACCAGCTCATGCGGCCTCATGGTCAACTACCGCTACTACCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 72 bp | CACTCACCACTGCTCAGGAACCCCTTGAGGCTCTCGTaGACAGGGTTGCCGGTAACCGCTGAGATTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HSPLLRNPLRLS*TGLPVTAEISW Trigger: CCAAGAAATCTCAGCGGTTACCGGCAACCCTGTTCACGAGAGCCTCAAGGGGTTCCTGAGCAGTGGTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CAA 72 bp | TCCTTCCCCTGCACATTCAGGAGGCCCAGCAGCCACTaGGTGAATCCAGGGATAGGCGACAGGCTTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: SFPCTFRRPSSH*VNPGIGDRLEK Trigger: CTTTTCAAGCCTGTCGCCTATCCCTGGATTCACCAAGTGGCTGCTGGGCCTCCTGAATGTGCAGGGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CAA 72 bp | CTGGTGAGGCCTTTGAGGCTGCTGTCAGCCATCCAGTaGATACGCCACATCACAGCCCCATTCTGCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: LVRPLRLLSAIQ*IRHITAPFCRW Trigger: CCATCTGCAGAATGGGGCTGTGATGTGGCGTATCAACTGGATGGCTGACAGCAGCCTCAAAGGCCTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 72 bp | CAGCCACTTGGTGAATCCAGGGATAGGCGACAGGCTTaGAAAGGCCCCCAGCTGAGGAAATTCCTTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QPLGESRDRRQA*KGPQLRKFLLQ Trigger: CTGCAGAAGGAATTTCCTCAGCTGGGGGCCTTTTCAAGCCTGTCGCCTATCCCTGGATTCACCAAGTGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CAA 90 bp | TCGGTTTCAGTCGGAGGGCACTCCTTCACAATGCCCTGGATGTTGTaGGAAATGTCACCAGTCAGAGCCACATGCAGAACCACCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: SVSVGGHSFTMPWML*EMSPVRATCRTTRG Trigger: ACCCCTGGTGGTTCTGCATGTGGCTCTGACTGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGACTGAAACCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CAA 90 bp | TCCTCGGTTTCAGTCGGAGGGCACTCCTTCACAATGCCCTGGATGTaGTTGGAAATGTCACCAGTCAGAGCCACATGCAGAACCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSVSVGGHSFTMPWM*LEMSPVRATCRTTR Trigger: CCTGGTGGTTCTGCATGTGGCTCTGACTGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGACTGAAACCGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS TCA 72 bp | TCCAGTTTTTCACAGGGTGCACAGCCTCACACTCGCTaGTCTTCTGAAGTACCTCACAGGGTGAGTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSFSQGAQPHTR*SSEVPHRVSAR Trigger: CCTGGCACTCACCCTGTGAGGTACTTCAGAAGATCAGCGAGTGTGAGGCTGTGCACCCTGTGAAAAACTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CAA 72 bp | GTCGGAGGGCACTCCTTCACAATGCCCTGGATGTTGTaGGAAATGTCACCAGTCAGAGCCACATGCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: VGGHSFTMPWML*EMSPVRATCRT Trigger: GGTTCTGCATGTGGCTCTGACTGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CCA 72 bp | TCGGAGGGCACTCCTTCACAATGCCCTGGATGTTGTTaGAAATGTCACCAGTCAGAGCCACATGCAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: SEGTPSQCPGCC*KCHQSEPHAEP Trigger: TGGTTCTGCATGTGGCTCTGACTGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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| CDS CAA 72 bp | TCAGTCGGAGGGCACTCCTTCACAATGCCCTGGATGTaGTTGGAAATGTCACCAGTCAGAGCCACATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SVGGHSFTMPWM*LEMSPVRATCR Trigger: TCTGCATGTGGCTCTGACTGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098367.5 |
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