Pregenerated sensors for MLX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017801Ensembl transcript IDs: ENSMUST00000017945.15, ENSMUST00000107302.8, ENSMUST00000107303.10, ENSMUST00000149597.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAGAAATGGAGACAACACACTGGTGGGGCAGATACACACATTATaGAGAAGAGGCTGGGGCTGCTTTGGAGGTCTGCTAAGAAGTTTG | + |
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Preference number: 1 (lower is better) Translates to: RRNGDNTLVGQIHTL*RRGWGCFGGLLRSL Trigger: CAAACTTCTTAGCAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAGACTTGAGGATCTCCTGTCCCACCTAACTCTATCCCCAGGCCCCAGGGGGCTCAGGGTTCTGTaGGGCTCCCTGAACAGACTC | + |
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Preference number: 2 (lower is better) Translates to: PRRLEDLLSHLTLSPGPRGLRVL*GSLNRL Trigger: GAGTCTGTTCAGGGAGCCTCACAGAACCCTGAGCCC...CCTGGGGCCTGGGGATAGAGTTAGGTGGGACAGGAGATCCTCAAGTCTTCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAGACTTGAGGATCTCCTGTCCCACCTAACTCTATCCCCAGGCCCCAGGAGCACCTACAGCAGCTaGAGTGGGCAGCAGAACATG | + |
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Preference number: 2 (lower is better) Translates to: PRRLEDLLSHLTLSPGPRSTYSS*SGQQNM Trigger: CATGTTCTGCTGCCCACTTCAGCTGCTGTAGGTGCT...CCTGGGGCCTGGGGATAGAGTTAGGTGGGACAGGAGATCCTCAAGTCTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGCAGATACACACATTATGCAGAAGAGGCTGGGGCTGCTTTGGAGGTCTGAGGCCTCTTGTTGGCTaGTCTGCAGGCTTCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: VGQIHTLCRRGWGCFGGLRPLVG*SAGFHG Trigger: CCCATGGAAGCCTGCAGAGCAGCCAACAAGAGGCCT...CAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGCCCCAGGAGAAATGGAGACAACACACTGGTGGGGCAGATACACACATTAGGCCTCTTGTTGGCTaGTCTGCAGGCTTCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: PRPQEKWRQHTGGADTHIRPLVG*SAGFHG Trigger: CCCATGGAAGCCTGCAGAGCAGCCAACAAGAGGCCT...AATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATTTCTCCTGGGGCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAAGACTTGAGGATCTCCTGTCCCACCTAACTCTATCCCCAGGCCCCAGGAGCCTAGGCACAAGGTaGCCTTTTACCCTTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: PRRLEDLLSHLTLSPGPRSLGTR*PFTLHG Trigger: GCCATGAAGGGTAAAAGGCCACCTTGTGCCTAGGCT...CCTGGGGCCTGGGGATAGAGTTAGGTGGGACAGGAGATCCTCAAGTCTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CCA 90 bp | GTAGCAGGGTCAGGCAGCCCTACCCTGAGCTGGCTAGAATACCCTGGCCTTACTCCACCGAAGCTGAAGTaGGGTTGGGAAAACCAAACA | + |
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Preference number: 2 (lower is better) Translates to: VAGSGSPTLSWLEYPGLTPPKLK*GWENQT Trigger: TGTTTGGTTTTCCCAACCCCACTTCAGCTTCGGTGG...AGTAAGGCCAGGGTATTCTAGCCAGCTCAGGGTAGGGCTGCCTGACCCTGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR GCA 90 bp | ACATTTGAGACTCCCAAGGGATCGCCCTGGCCTACCCCCAGAAGACTTGAGGATCAGATACACACATTATaGAGAAGAGGCTGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TFETPKGSPWPTPRRLEDQIHTL*RRGWGC Trigger: GCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTG...ATCCTCAAGTCTTCTGGGGGTAGGCCAGGGCGATCCCTTGGGAGTCTCAAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGCAGATACACACATTATGCAGAAGAGGCTGGGGCTGCTTTGGAGGTCTGCAGCAGTTAGTTCCATaGCCACACTCTCAAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VGQIHTLCRRGWGCFGGLQQLVP*PHSQRP Trigger: AGGCCTTTGAGAGTGTGGCCATGGAACTAACTGCTG...CAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGCAGATACACACATTATGCAGAAGAGGCTGGGGCTGCTTTGGAGGTCTGCCACCGAAGCTGAAGTaGGGTTGGGAAAACCAAACA | + |
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Preference number: 2 (lower is better) Translates to: VGQIHTLCRRGWGCFGGLPPKLK*GWENQT Trigger: TGTTTGGTTTTCCCAACCCCACTTCAGCTTCGGTGG...CAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGGGGCTCAGGGTTCTGTaGGGCTCCCTGAACAGACTC | + |
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Preference number: 2 (lower is better) Translates to: IRVQKGCHTPTFETPKGSGLRVL*GSLNRL Trigger: GAGTCTGTTCAGGGAGCCTCACAGAACCCTGAGCCC...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAGACTTGAGGATCTCCTGTCCCACCTAACTCTATCCCCAGGCCCCAGGTATGTATATAGATTGTaGGCAGGAACCCAGTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: PRRLEDLLSHLTLSPGPRYVYRL*AGTQWV Trigger: TACCCACTGGGTTCCTGCTCACAATCTATATACATA...CCTGGGGCCTGGGGATAGAGTTAGGTGGGACAGGAGATCCTCAAGTCTTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGACAACACACTGGTGGGGCAGATACACACATTATGCAGAAGAGGCTGGAGCACCTACAGCAGCTaGAGTGGGCAGCAGAACATG | + |
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Preference number: 2 (lower is better) Translates to: NGDNTLVGQIHTLCRRGWSTYSS*SGQQNM Trigger: CATGTTCTGCTGCCCACTTCAGCTGCTGTAGGTGCT...CCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGCCCTGGCCTACAGCAGTTAGTTCCATaGCCACACTCTCAAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RKGAIHQHLRLPRDRPGLQQLVP*PHSQRP Trigger: AGGCCTTTGAGAGTGTGGCCATGGAACTAACTGCTG...TAGGCCAGGGCGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGGAAAACCAAACACCAAGTAGAAACCAGCTGACCGGTGTGAGGTGTTGCCAGCAGTTAGTTCCATaGCCACACTCTCAAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GWENQTPSRNQLTGVRCCQQLVP*PHSQRP Trigger: AGGCCTTTGAGAGTGTGGCCATGGAACTAACTGCTG...GCAACACCTCACACCGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTCCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGACAACACACTGGTGGGGCAGATACACACATTATGCAGAAGAGGCTGGTTCTGTGAGGCTCCCTaGACAGACTCTTGTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: NGDNTLVGQIHTLCRRGWFCEAP*TDSCPR Trigger: TCTAGGACAAGAGTCTGTTCAGGGAGCCTCACAGAA...CCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTTGCCTTTGGGAAGACAGGGCAAGAGCTGATGGGACGCTGTTTCCTGTACAAAATACCCAAACTTaGGCCAAGTGTTGCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: CLCLWEDRARADGTLFPVQNTQT*AKCCPR Trigger: TCTTGGGCAACACTTGGCTCAAGTTTGGGTATTTTG...TACAGGAAACAGCGTCCCATCAGCTCTTGCCCTGTCTTCCCAAAGGCAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CCA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGAGCCTAGGCACAAGGTaGCCTTTTACCCTTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: IRVQKGCHTPTFETPKGSSLGTR*PFTLHG Trigger: GCCATGAAGGGTAAAAGGCCACCTTGTGCCTAGGCT...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGTTCTGTGAGGCTCCCTaGACAGACTCTTGTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: IRVQKGCHTPTFETPKGSFCEAP*TDSCPR Trigger: TCTAGGACAAGAGTCTGTTCAGGGAGCCTCACAGAA...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CCA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGAGGCTGGGGCTGCTTTaGAGGTCTGCTAAGAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: IRVQKGCHTPTFETPKGSRLGLL*RSAKKF Trigger: AAACTTCTTAGCAGACCTCCAAAGCAGCCCCAGCCT...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTCAGGGTTCTGTGAGGCTCCCTGAACAGACTCTTGTCCTAGAGGCTTTTCTCAAAGGCCTCTTGTaGGCTGCTCTGCAGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GAQGSVRLPEQTLVLEAFLKGLL*AALQAS Trigger: GGAAGCCTGCAGAGCAGCCAACAAGAGGCCTTTGAG...AAAAGCCTCTAGGACAAGAGTCTGTTCAGGGAGCCTCACAGAACCCTGAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | CCCAGGCCCCAGGAGAAATGGAGACAACACACTGGTGGGGCAGATACACACATTACTCTCAAAGGCCTCTaGTTGGCTGCTCTGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PRPQEKWRQHTGGADTHITLKGL*LAALQA Trigger: AGCCTGCAGAGCAGCCAACAAGAGGCCTTTGAGAGT...AATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATTTCTCCTGGGGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGCAGATACACACATTATGCAGAAGAGGCTGGGGCTGCTTTGGAGGTCTGACTCTCAAAGGCCTCTaGTTGGCTGCTCTGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: VGQIHTLCRRGWGCFGGLTLKGL*LAALQA Trigger: AGCCTGCAGAGCAGCCAACAAGAGGCCTTTGAGAGT...CAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR CCA 72 bp | CATACACCAACATTTGAGACTCCCAAGGGATCGCCCTaGCCTACCCCCAGAAGACTTGAGGATCTCCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: HTPTFETPKGSP*PTPRRLEDLLS Trigger: GGACAGGAGATCCTCAAGTCTTCTGGGGGTAGGCCAGGGCGATCCCTTGGGAGTCTCAAATGTTGGTGTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | GGTTGGGAAAACCAAACACCAAGTAGAAACCAGCTGACCGGTGTGAGGTGTTGCCTCAAAGGCCTCTTGTaGGCTGCTCTGCAGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GWENQTPSRNQLTGVRCCLKGLL*AALQAS Trigger: GGAAGCCTGCAGAGCAGCCAACAAGAGGCCTTTGAG...GCAACACCTCACACCGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTCAGGGTTCTGTGAGGCTCCCTGAACAGACTCTTGTCCTAGAGGCTTTTGAAGCTGAAGTGGGGTaGGGAAAACCAAACACCAAG | + |
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Preference number: 3 (lower is better) Translates to: GAQGSVRLPEQTLVLEAFEAEVG*GKPNTK Trigger: CTTGGTGTTTGGTTTTCCCAACCCCACTTCAGCTTC...AAAAGCCTCTAGGACAAGAGTCTGTTCAGGGAGCCTCACAGAACCCTGAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | CCCAGGCCCCAGGAGAAATGGAGACAACACACTGGTGGGGCAGATACACACATTTATGTAATGCTGCCTTaGCCTTTGGGAAGACAGGGC | + |
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Preference number: 3 (lower is better) Translates to: PRPQEKWRQHTGGADTHIYVMLP*PLGRQG Trigger: GCCCTGTCTTCCCAAAGGCAAAGGCAGCATTACATA...AATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATTTCTCCTGGGGCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR CCA 72 bp | CTGGTGGGGCAGATACACACATTATGCAGAAGAGGCTaGGGCTGCTTTGGAGGTCTGCTAAGAAGTTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: LVGQIHTLCRRG*GCFGGLLRSLG Trigger: TCCCAAACTTCTTAGCAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGGACCGGTGTGAGGTGTaGCAGGCCAGTCTCATAGGC | + |
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Preference number: 3 (lower is better) Translates to: IRVQKGCHTPTFETPKGSDRCEV*QASLIG Trigger: GCCTATGAGACTGGCCTGCAACACCTCACACCGGTC...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGCAGATACACACATTATGCAGAAGAGGCTGGGGCTGCTTTGGAGGTCTGCCAAAATACCCAAACTaGAGCCAAGTGTTGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: VGQIHTLCRRGWGCFGGLPKYPN*SQVLPK Trigger: CTTGGGCAACACTTGGCTCAAGTTTGGGTATTTTGG...CAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGCTCAAAGGCCTCTTGTaGGCTGCTCTGCAGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: IRVQKGCHTPTFETPKGSLKGLL*AALQAS Trigger: GGAAGCCTGCAGAGCAGCCAACAAGAGGCCTTTGAG...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | TGCCTTTGCCTTTGGGAAGACAGGGCAAGAGCTGATGGGACGCTGTTTCCTGTACCAAAATACCCAAACTaGAGCCAAGTGTTGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: CLCLWEDRARADGTLFPVPKYPN*SQVLPK Trigger: CTTGGGCAACACTTGGCTCAAGTTTGGGTATTTTGG...TACAGGAAACAGCGTCCCATCAGCTCTTGCCCTGTCTTCCCAAAGGCAAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR GCA 72 bp | GGGCAGATACACACATTATGCAGAAGAGGCTGGGGCTaGTTTGGAGGTCTGCTAAGAAGTTTGGGAAACTGC | + |
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Preference number: 3 (lower is better) Translates to: GQIHTLCRRGWG*FGGLLRSLGNC Trigger: GCAGTTTCCCAAACTTCTTAGCAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR GCA 72 bp | GGCAGTAGGAAACATGGGATAAGAGTACAGAAAGGGTaGCATACACCAACATTTGAGACTCCCAAGGGATCG | + |
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Preference number: 3 (lower is better) Translates to: GSRKHGIRVQKG*HTPTFETPKGS Trigger: CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTATCCCATGTTTCCTACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR-3UTR CAA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGTATGTAATGCTGCCTTaGCCTTTGGGAAGACAGGGC | + |
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Preference number: 3 (lower is better) Translates to: IRVQKGCHTPTFETPKGSYVMLP*PLGRQG Trigger: GCCCTGTCTTCCCAAAGGCAAAGGCAGCATTACATA...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| 3UTR TCA 72 bp | AGAGGCAAACGATTTCCAAATTATGTATATAGATTGTaGGCAGGAACCCAGTGGGTAGAGAAAAGGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: RGKRFPNYVYRL*AGTQWVEKRLR Trigger: CCTCAGCCTTTTCTCTACCCACTGGGTTCCTGCTCACAATCTATATACATAATTTGGAAATCGTTTGCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR GCA 90 bp | ACATTTGAGACTCCCAAGGGATCGCCCTGGCCTACCCCCAGAAGACTTGAGGATTCCGGACCCCCTACGTaGACGAGCCCGACCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TFETPKGSPWPTPRRLEDSGPPT*TSPTRP Trigger: AGGGCGGGTCGGGCTCGTGCACGTAGGGGGTCCGGA...ATCCTCAAGTCTTCTGGGGGTAGGCCAGGGCGATCCCTTGGGAGTCTCAAATGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017945.15 |
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| CDS-3UTR GCA 90 bp | GGGGCTCAGGGTTCTGTGAGGCTCCCTGAACAGACTCTTGTCCTAGAGGCTTTTGAGAGCTGTCTTCTCTaGAGCCCCGGGCCCCGGACA | + |
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Preference number: 4 (lower is better) Translates to: GAQGSVRLPEQTLVLEAFESCLL*SPGPRT Trigger: TGTCCGGGGCCCGGGGCTGCAGAGAAGACAGCTCTC...AAAAGCCTCTAGGACAAGAGTCTGTTCAGGGAGCCTCACAGAACCCTGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017945.15 |
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| CDS-3UTR GCA 90 bp | TGCCTTTGCCTTTGGGAAGACAGGGCAAGAGCTGATGGGACGCTGTTTCCTGTACGCGTCCGCGAAGCTTaGCTTGACCCAAGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CLCLWEDRARADGTLFPVRVREA*LDPRVL Trigger: GAGGACCCTTGGGTCAAGGCAAGCTTCGCGGACGCG...TACAGGAAACAGCGTCCCATCAGCTCTTGCCCTGTCTTCCCAAAGGCAAAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017945.15 |
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| CDS-3UTR TCA 90 bp | AATGGAGACAACACACTGGTGGGGCAGATACACACATTATGCAGAAGAGGCTGGCCGCGAAGCTTGCCTTaGCCCAAGGGTCCTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: NGDNTLVGQIHTLCRRGWPRSLP*PKGPPE Trigger: CTCCGGAGGACCCTTGGGTCAAGGCAAGCTTCGCGG...CCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017945.15 |
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| CDS-3UTR GCA 90 bp | CCCAGAAGACTTGAGGATCTCCTGTCCCACCTAACTCTATCCCCAGGCCCCAGGCACTCCCCTTGTGGGTaGTTTCTACAAAAAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PRRLEDLLSHLTLSPGPRHSPCG*FLQKAQ Trigger: CTGGGCTTTTTGTAGAAAGCACCCACAAGGGGAGTG...CCTGGGGCCTGGGGATAGAGTTAGGTGGGACAGGAGATCCTCAAGTCTTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 |
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| CDS-3UTR CCA 90 bp | GGGGCTCAGGGTTCTGTGAGGCTCCCTGAACAGACTCTTGTCCTAGAGGCTTTTCGTCCTTGCGCAGTGTaGATACTTCTTCCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GAQGSVRLPEQTLVLEAFRPCAV*ILLPPA Trigger: AGCAGGAGGAAGAAGTATCCACACTGCGCAAGGACG...AAAAGCCTCTAGGACAAGAGTCTGTTCAGGGAGCCTCACAGAACCCTGAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CCA 90 bp | GTGGGGCAGATACACACATTATGCAGAAGAGGCTGGGGCTGCTTTGGAGGTCTGCGTCCTTGCGCAGTGTaGATACTTCTTCCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VGQIHTLCRRGWGCFGGLRPCAV*ILLPPA Trigger: AGCAGGAGGAAGAAGTATCCACACTGCGCAAGGACG...CAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCCCAGGAGAAATGGAGACAACACACTGGTGGGGCAGATACACACATTGAGTCCATGATGCCTTaGAAGACGTTGAACTTGACC | + |
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Preference number: 4 (lower is better) Translates to: PRPQEKWRQHTGGADTHIESMMP*KTLNLT Trigger: GGTCAAGTTCAACGTCTTTCAAGGCATCATGGACTC...AATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATTTCTCCTGGGGCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CCA 90 bp | TGCCTTTGCCTTTGGGAAGACAGGGCAAGAGCTGATGGGACGCTGTTTCCTGTAACGTTGAACTTGACCTaGTCAGAGACCTGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: CLCLWEDRARADGTLFPVTLNLT*SETWSS Trigger: AGAGGACCAGGTCTCTGACCAGGTCAAGTTCAACGT...TACAGGAAACAGCGTCCCATCAGCTCTTGCCCTGTCTTCCCAAAGGCAAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR TCA 90 bp | TGCCTTTGCCTTTGGGAAGACAGGGCAAGAGCTGATGGGACGCTGTTTCCTGTAGAGTCCATGATGCCTTaGAAGACGTTGAACTTGACC | + |
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Preference number: 4 (lower is better) Translates to: CLCLWEDRARADGTLFPVESMMP*KTLNLT Trigger: GGTCAAGTTCAACGTCTTTCAAGGCATCATGGACTC...TACAGGAAACAGCGTCCCATCAGCTCTTGCCCTGTCTTCCCAAAGGCAAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CCA 90 bp | GGTTGGGAAAACCAAACACCAAGTAGAAACCAGCTGACCGGTGTGAGGTGTTGCACGTTGAACTTGACCTaGTCAGAGACCTGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GWENQTPSRNQLTGVRCCTLNLT*SETWSS Trigger: AGAGGACCAGGTCTCTGACCAGGTCAAGTTCAACGT...GCAACACCTCACACCGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTCCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR GCA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGCCAATGGAGAAATCCTaGTGCTGGCAGGTAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: IRVQKGCHTPTFETPKGSPMEKS*CWQVGT Trigger: TGTCCCTACCTGCCAGCAGCAGGATTTCTCCATTGG...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CCA 90 bp | TGCCTTTGCCTTTGGGAAGACAGGGCAAGAGCTGATGGGACGCTGTTTCCTGTAACTGGATGTAGTCAATaGTCTTCTGTAGAACGATGG | + |
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Preference number: 4 (lower is better) Translates to: CLCLWEDRARADGTLFPVTGCSQ*SSVERW Trigger: CCATCGTTCTACAGAAGACCATTGACTACATCCAGT...TACAGGAAACAGCGTCCCATCAGCTCTTGCCCTGTCTTCCCAAAGGCAAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CCA 90 bp | GGTTGGGAAAACCAAACACCAAGTAGAAACCAGCTGACCGGTGTGAGGTGTTGCACTGGATGTAGTCAATaGTCTTCTGTAGAACGATGG | + |
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Preference number: 4 (lower is better) Translates to: GWENQTPSRNQLTGVRCCTGCSQ*SSVERW Trigger: CCATCGTTCTACAGAAGACCATTGACTACATCCAGT...GCAACACCTCACACCGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTCCCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CCA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGACGTTGAACTTGACCTaGTCAGAGACCTGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: IRVQKGCHTPTFETPKGSTLNLT*SETWSS Trigger: AGAGGACCAGGTCTCTGACCAGGTCAAGTTCAACGT...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CCA 90 bp | ATAAGAGTACAGAAAGGGTGCCATACACCAACATTTGAGACTCCCAAGGGATCGACTGGATGTAGTCAATaGTCTTCTGTAGAACGATGG | + |
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Preference number: 4 (lower is better) Translates to: IRVQKGCHTPTFETPKGSTGCSQ*SSVERW Trigger: CCATCGTTCTACAGAAGACCATTGACTACATCCAGT...CGATCCCTTGGGAGTCTCAAATGTTGGTGTATGGCACCCTTTCTGTACTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS GCA 90 bp | AGCCCGACCCGCCCTCCCCTCGCCGGCGTGCGCGTCCGCGAAGCTTaGCTTGACCCAAGGGTCCTCCGGAGAGGCGCCCGGCTCCGTCAT | + |
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Preference number: 5 (lower is better) Translates to: SPTRPPLAGVRVREA*LDPRVLRRGARLRH Trigger: ATGACGGAGCCGGGCGCCTCTCCGGAGGACCCTTGGGTCAAGGCAAGCTTCGCGGACGCGCACGCCGGCGAGGGGAGGGCGGGTCGGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017945.15 ENSMUST00000149597.2 |
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| CDS-3UTR CAA 90 bp | ACATTTGAGACTCCCAAGGGATCGCCCTGGCCTACCCCCAGAAGACTTGAGGATTCCGCGAAGCTTGCCTaGACCCAAGGGTCCTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: TFETPKGSPWPTPRRLEDSAKLA*TQGSSG Trigger: TCCGGAGGACCCTTGGGTCAAGGCAAGCTTCGCGGA...ATCCTCAAGTCTTCTGGGGGTAGGCCAGGGCGATCCCTTGGGAGTCTCAAATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017945.15 |
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| CDS-3UTR CAA 90 bp | TGCCTTTGCCTTTGGGAAGACAGGGCAAGAGCTGATGGGACGCTGTTTCCTGTAAAGGCTGTGACGTCCTaGCGCAGTGTGGATACTTCT | + |
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Preference number: 5 (lower is better) Translates to: CLCLWEDRARADGTLFPVKAVTS*RSVDTS Trigger: AGAAGTATCCACACTGCGCAAGGACGTCACAGCCTT...TACAGGAAACAGCGTCCCATCAGCTCTTGCCCTGTCTTCCCAAAGGCAAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CAA 90 bp | CAGGCCAGTCTCATAGGCCCAGCAGTTAGTTCCATGGCCACACTCTCAAAGGCCGGAGTCCATGATGCCTaGAAAGACGTTGAACTTGAC | + |
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Preference number: 5 (lower is better) Translates to: QASLIGPAVSSMATLSKAGVHDA*KDVELD Trigger: GTCAAGTTCAACGTCTTTCAAGGCATCATGGACTCC...GGCCTTTGAGAGTGTGGCCATGGAACTAACTGCTGGGCCTATGAGACTGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS TCA 90 bp | GAGATAGAGGCGTTGAAAGACTGGAAGAGGGAGTCCATGATGCCTTaGAAGACGTTGAACTTGACCTGGTCAGAGACCTGGTCCTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: EIEALKDWKRESMMP*KTLNLTWSETWSSP Trigger: GGGAGAGGACCAGGTCTCTGACCAGGTCAAGTTCAACGTCTTTCAAGGCATCATGGACTCCCTCTTCCAGTCTTTCAACGCCTCTATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CAA 90 bp | GTGGGGCAGATACACACATTATGCAGAAGAGGCTGGGGCTGCTTTGGAGGTCTGGGAGTCCATGATGCCTaGAAAGACGTTGAACTTGAC | + |
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Preference number: 5 (lower is better) Translates to: VGQIHTLCRRGWGCFGGLGVHDA*KDVELD Trigger: GTCAAGTTCAACGTCTTTCAAGGCATCATGGACTCC...CAGACCTCCAAAGCAGCCCCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CAA 90 bp | AATGGAGACAACACACTGGTGGGGCAGATACACACATTATGCAGAAGAGGCTGGAAGGCTGTGACGTCCTaGCGCAGTGTGGATACTTCT | + |
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Preference number: 5 (lower is better) Translates to: NGDNTLVGQIHTLCRRGWKAVTS*RSVDTS Trigger: AGAAGTATCCACACTGCGCAAGGACGTCACAGCCTT...CCAGCCTCTTCTGCATAATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CAA 90 bp | GGTTGGGAAAACCAAACACCAAGTAGAAACCAGCTGACCGGTGTGAGGTGTTGCGGAGTCCATGATGCCTaGAAAGACGTTGAACTTGAC | + |
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Preference number: 5 (lower is better) Translates to: GWENQTPSRNQLTGVRCCGVHDA*KDVELD Trigger: GTCAAGTTCAACGTCTTTCAAGGCATCATGGACTCC...GCAACACCTCACACCGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTCCCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CAA 90 bp | CCCAGGCCCCAGGAGAAATGGAGACAACACACTGGTGGGGCAGATACACACATTATGTGCCTTCACGATTaGCTCATAGTTCACTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: PRPQEKWRQHTGGADTHIMCLHD*LIVHFH Trigger: ATGAAAGTGAACTATGAGCAAATCGTGAAGGCACAT...AATGTGTGTATCTGCCCCACCAGTGTGTTGTCTCCATTTCTCCTGGGGCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS-3UTR CAA 90 bp | GGGGCTCAGGGTTCTGTGAGGCTCCCTGAACAGACTCTTGTCCTAGAGGCTTTTATGTGCCTTCACGATTaGCTCATAGTTCACTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GAQGSVRLPEQTLVLEAFMCLHD*LIVHFH Trigger: ATGAAAGTGAACTATGAGCAAATCGTGAAGGCACAT...AAAAGCCTCTAGGACAAGAGTCTGTTCAGGGAGCCTCACAGAACCCTGAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS TCA 90 bp | CCTTCACGATTTGCTCATAGTTCACTTTCATTATCTTCAAGGCTGTaGCGTCCTTGCGCAGTGTGGATACTTCTTCCTCCTGCTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PSRFAHSSLSLSSRL*RPCAVWILLPPAFS Trigger: AGAAAAAGCAGGAGGAAGAAGTATCCACACTGCGCAAGGACGTCACAGCCTTGAAGATAATGAAAGTGAACTATGAGCAAATCGTGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS GCA 72 bp | CGCCCTCCCCTCGCCGGCGTGCGCGTCCGCGAAGCTTaGCTTGACCCAAGGGTCCTCCGGAGAGGCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RPPLAGVRVREA*LDPRVLRRGAR Trigger: CCGGGCGCCTCTCCGGAGGACCCTTGGGTCAAGGCAAGCTTCGCGGACGCGCACGCCGGCGAGGGGAGGGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017945.15 ENSMUST00000149597.2 |
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| CDS TCA 72 bp | TCCCCTCGCCGGCGTGCGCGTCCGCGAAGCTTGCCTTaGCCCAAGGGTCCTCCGGAGAGGCGCCCGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SPRRRARPRSLP*PKGPPERRPAP Trigger: CGGAGCCGGGCGCCTCTCCGGAGGACCCTTGGGTCAAGGCAAGCTTCGCGGACGCGCACGCCGGCGAGGGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017945.15 ENSMUST00000149597.2 |
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| CDS CAA 90 bp | AGAGATAGAGGCGTTGAAAGACTGGAAGAGGGAGTCCATGATGCCTaGAAAGACGTTGAACTTGACCTGGTCAGAGACCTGGTCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RDRGVERLEEGVHDA*KDVELDLVRDLVLS Trigger: GGAGAGGACCAGGTCTCTGACCAGGTCAAGTTCAACGTCTTTCAAGGCATCATGGACTCCCTCTTCCAGTCTTTCAACGCCTCTATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS TCA 72 bp | GCGTTGAAAGACTGGAAGAGGGAGTCCATGATGCCTTaGAAGACGTTGAACTTGACCTGGTCAGAGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALKDWKRESMMP*KTLNLTWSETW Trigger: CCAGGTCTCTGACCAGGTCAAGTTCAACGTCTTTCAAGGCATCATGGACTCCCTCTTCCAGTCTTTCAACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS CAA 72 bp | GGCGTTGAAAGACTGGAAGAGGGAGTCCATGATGCCTaGAAAGACGTTGAACTTGACCTGGTCAGAGACCTG | + |
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Preference number: 6 (lower is better) Translates to: GVERLEEGVHDA*KDVELDLVRDL Trigger: CAGGTCTCTGACCAGGTCAAGTTCAACGTCTTTCAAGGCATCATGGACTCCCTCTTCCAGTCTTTCAACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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| CDS TCA 72 bp | TTTGCTCATAGTTCACTTTCATTATCTTCAAGGCTGTaGCGTCCTTGCGCAGTGTGGATACTTCTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FAHSSLSLSSRL*RPCAVWILLPP Trigger: AGGAGGAAGAAGTATCCACACTGCGCAAGGACGTCACAGCCTTGAAGATAATGAAAGTGAACTATGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017945.15 ENSMUST00000107302.8 ENSMUST00000107303.10 |
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