Pregenerated sensors for MLLT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028496Ensembl transcript IDs: ENSMUST00000078090.12, ENSMUST00000126353.8, ENSMUST00000142454.2, ENSMUST00000148059.2, ENSMUST00000149357.8
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGAGGCTTTGAAAAACTGGTACTACTGCTGCTGCTGCTGCTGCTaGTACTGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: CEALKNWYYCCCCCC*YCCCCCCYCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTACCAGTTTTTCAAAGCCTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR TCA 90 bp | CTGCTGCTGCTGCTACTGCTGCTGCTGCTGCTGCTACTGCTGGTATaGATGCTCCTGTTAGGGTCCCCTCCTGCCTTCAGCAACTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LLLLLLLLLLLLLLV*MLLLGSPPAFSNFL Trigger: AAGAAAGTTGCTGAAGGCAGGAGGGGACCCTAACAGGAGCATTCATACCAGCAGTAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR CCA 90 bp | GGCTCATGCCCATCGTCACGAGGAGTCAGGACATTCTTGAAAATGTaGATCCTGCTCCTCGAGGAGGACACTGCAGGAACGCAATCTACA | + |
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Preference number: 1 (lower is better) Translates to: GSCPSSRGVRTFLKM*ILLLEEDTAGTQST Trigger: TGTAGATTGCGTTCCTGCAGTGTCCTCCTCGAGGAGCAGGATCCACATTTTCAAGAATGTCCTGACTCCTCGTGACGATGGGCATGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR GCA 90 bp | GCTGCTGCTACTGCTGGTATGAATGCTCCTGTTAGGGTCCCCTCCTaGCTTCAGCAACTTTCTTCTAAAGTCCTCCGTGGGGTTATTGAA | + |
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Preference number: 1 (lower is better) Translates to: AAATAGMNAPVRVPS*LQQLSSKVLRGVIE Trigger: TTCAATAACCCCACGGAGGACTTTAGAAGAAAGTTGCTGAAGGCAGGAGGGGACCCTAACAGGAGCATTCATACCAGCAGTAGCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR GCA 90 bp | ACGTATCTATGCAACTGCACACCAAGAAGAGGACTACACACCAAATaGTTCAAGTACGGCTCATGCCCATCGTCACGAGGAGTCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: TYLCNCTPRRGLHTK*FKYGSCPSSRGVRT Trigger: TGTCCTGACTCCTCGTGACGATGGGCATGAGCCGTACTTGAAGCATTTGGTGTGTAGTCCTCTTCTTGGTGTGCAGTTGCATAGATACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR CCA 90 bp | GTGTTGTGTCTGCTTGTTTTCAAGGCTATCCAGGCTAATTCTTCCTaGGGATTTCCTTGCAGAGGAGTGTCCGCTGAGGCTGGTTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: VLCLLVFKAIQANSS*GFPCRGVSAEAGLG Trigger: ACCTAAACCAGCCTCAGCGGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTGGATAGCCTTGAAAACAAGCAGACACAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR CCA 90 bp | ATAGACTGCAACAAGTTAAAGGACCTGGGAAGAGTTGGTGGAAAGTaGCACAGTATACGAATAAGGTCACTGGGCTTGGGACGGCAAGGG | + |
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Preference number: 1 (lower is better) Translates to: IDCNKLKDLGRVGGK*HSIRIRSLGLGRQG Trigger: CCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCCACCAACTCTTCCCAGGTCCTTTAACTTGTTGCAGTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR GCA 90 bp | CTTGTTTTCAAGGCTATCCAGGCTAATTCTTCCTGGGGATTTCCTTaGAGAGGAGTGTCCGCTGAGGCTGGTTTAGGTAACCTCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: LVFKAIQANSSWGFP*RGVSAEAGLGNLSF Trigger: AAAGGAGAGGTTACCTAAACCAGCCTCAGCGGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTGGATAGCCTTGAAAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR GCA 90 bp | TGCAACAGTAAAATAGAGACACGAGTGTTGGTGACAGCTCGGCACTaGTGGGCTGTGGACATCACAGGGACACTTTTGTTCAAAGTCCTA | + |
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Preference number: 1 (lower is better) Translates to: CNSKIETRVLVTARH*WAVDITGTLLFKVL Trigger: TAGGACTTTGAACAAAAGTGTCCCTGTGATGTCCACAGCCCAGCAGTGCCGAGCTGTCACCAACACTCGTGTCTCTATTTTACTGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR CCA 90 bp | GGAAACCATAGACTGCAACAAGTTAAAGGACCTGGGAAGAGTTGGTaGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGGACG | + |
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Preference number: 1 (lower is better) Translates to: GNHRLQQVKGPGKSW*KVAQYTNKVTGLGT Trigger: CGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCCACCAACTCTTCCCAGGTCCTTTAACTTGTTGCAGTCTATGGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR CCA 90 bp | AACAGTAAAATAGAGACACGAGTGTTGGTGACAGCTCGGCACTGCTaGGCTGTGGACATCACAGGGACACTTTTGTTCAAAGTCCTACAG | + |
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Preference number: 1 (lower is better) Translates to: NSKIETRVLVTARHC*AVDITGTLLFKVLQ Trigger: CTGTAGGACTTTGAACAAAAGTGTCCCTGTGATGTCCACAGCCCAGCAGTGCCGAGCTGTCACCAACACTCGTGTCTCTATTTTACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR CCA 90 bp | GATGGAAACCATAGACTGCAACAAGTTAAAGGACCTGGGAAGAGTTaGTGGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: DGNHRLQQVKGPGKS*WKVAQYTNKVTGLG Trigger: CCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCCACCAACTCTTCCCAGGTCCTTTAACTTGTTGCAGTCTATGGTTTCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR CCA 90 bp | GTTTTTCCTTGTGCTCCTTCATTAATTTGTGAGGCTTTGAAAAACTaGTACTACTGCTGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: VFPCAPSLICEALKN*YYCCCCCCCYCCCC Trigger: GCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTACCAGTTTTTCAAAGCCTCACAAATTAATGAAGGAGCACAAGGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR TCA 90 bp | ATGTGGCAGGAGTGGTCTGCTGCTAGAGAAATGTGGCACATTCTTTaGGTGGAGCTGAAGGGAATTCATGACTTCTGTATTTTCAGATCA | + |
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Preference number: 1 (lower is better) Translates to: MWQEWSAAREMWHIL*VELKGIHDFCIFRS Trigger: TGATCTGAAAATACAGAAGTCATGAATTCCCTTCAGCTCCACTCAAAGAATGTGCCACATTTCTCTAGCAGCAGACCACTCCTGCCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR GCA 90 bp | CAGGACATTCTTGAAAATGTGGATCCTGCTCCTCGAGGAGGACACTaGAGGAACGCAATCTACAAAGACCATGGCTGTTTTATCATTTTT | + |
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Preference number: 1 (lower is better) Translates to: QDILENVDPAPRGGH*RNAIYKDHGCFIIF Trigger: AAAAATGATAAAACAGCCATGGTCTTTGTAGATTGCGTTCCTGCAGTGTCCTCCTCGAGGAGCAGGATCCACATTTTCAAGAATGTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR CCA 90 bp | CCCCTCCCAACCACCTTTACCTTTCACCTATACAGGAAATCCTTCTaGACACATCAGCAAGAGACTACACAGATACAAAGTTACCAAATC | + |
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Preference number: 1 (lower is better) Translates to: PLPTTFTFHLYRKSF*THQQETTQIQSYQI Trigger: GATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAGGTGAAAGGTAAAGGTGGTTGGGAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR TCA 90 bp | TTGTTTTCTTTGGGTTTCTTGGAGGAGTCTTTGGAAGATTTGTTGTaGTCCCTGGAAGGTTCTTTGAAGGCACTTTTATGTTCTCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LFSLGFLEESLEDLL*SLEGSLKALLCSLE Trigger: CTCCAGAGAACATAAAAGTGCCTTCAAAGAACCTTCCAGGGATCACAACAAATCTTCCAAAGACTCCTCCAAGAAACCCAAAGAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR CCA 90 bp | ATCAGTTATGTAATAAGGCAGTGTGTTGAATATGCATTCGTCCTGTaGAATGAACCACCACAGAAAGATCCACGGTACCATACACATTCT | + |
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Preference number: 1 (lower is better) Translates to: ISYVIRQCVEYAFVL*NEPPQKDPRYHTHS Trigger: AGAATGTGTATGGTACCGTGGATCTTTCTGTGGTGGTTCATTCCACAGGACGAATGCATATTCAACACACTGCCTTATTACATAACTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR TCA 90 bp | GTGGACATCACAGGGACACTTTTGTTCAAAGTCCTACAGGTTTATTaGCTAAGGCTAGACAGCAATTCAAATGATCCTATTTGGTACATC | + |
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Preference number: 1 (lower is better) Translates to: VDITGTLLFKVLQVY*LRLDSNSNDPIWYI Trigger: GATGTACCAAATAGGATCATTTGAATTGCTGTCTAGCCTTAGTCAATAAACCTGTAGGACTTTGAACAAAAGTGTCCCTGTGATGTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR CCA 90 bp | GGAGTACAAGTGCCAAAATACATATTTACAGTGTACAGACAGCAGTaGCTTTGTCTTCCTTTGAAATTGACTGCATCTTTACAAGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: GVQVPKYIFTVYRQQ*LCLPLKLTASLQGR Trigger: TCTACCTTGTAAAGATGCAGTCAATTTCAAAGGAAGACAAAGCCACTGCTGTCTGTACACTGTAAATATGTATTTTGGCACTTGTACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR TCA 90 bp | CAAAGTCCTACAGGTTTATTGACTAAGGCTAGACAGCAATTCAAATaGTCCTATTTGGTACATCTACCATGTCCAAGATCATTACATGGA | + |
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Preference number: 1 (lower is better) Translates to: QSPTGLLTKARQQFK*SYLVHLPCPRSLHG Trigger: TCCATGTAATGATCTTGGACATGGTAGATGTACCAAATAGGATCATTTGAATTGCTGTCTAGCCTTAGTCAATAAACCTGTAGGACTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR GCA 90 bp | TTAAGAAGAAATGAGTACCACACTGGCTGCGGGAGACAAGTGAAATaGTCACTAATAAATAGATTCAAATTAAGAACATCTACACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LRRNEYHTGCGRQVK*SLINRFKLRTSTLL Trigger: CAGCAGTGTAGATGTTCTTAATTTGAATCTATTTATTAGTGAGCATTTCACTTGTCTCCCGCAGCCAGTGTGGTACTCATTTCTTCTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR CAA 90 bp | AGAGTTGGTGGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTaGGGACGGCAAGGGCGCTGCATTGAAAGAGCATCCGCGGGACCG | + |
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Preference number: 2 (lower is better) Translates to: RVGGKWHSIRIRSLG*GRQGRCIERASAGP Trigger: CGGTCCCGCGGATGCTCTTTCAATGCAGCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCCACCAACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATCCGCGGGACCGAGTATTTAGGACGTCTGGTGGTGTCATTCCCTCACAACCAGGCTAATTCTTCCTaGGGATTTCCTTGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SIRGTEYLGRLVVSFPHNQANSS*GFPCRG Trigger: TCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTG...GTTGTGAGGGAATGACACCACCAGACGTCCTAAATACTCGGTCCCGCGGATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGGACGGCAAGGGCGCTATGCATTCGTCCTGTaGAATGAACCACCACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GKWHSIRIRSLGLGRQGRYAFVL*NEPPQK Trigger: TTTCTGTGGTGGTTCATTCCACAGGACGAATGCATA...GCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR-3UTR TCA 90 bp | AGCATCCGCGGGACCGAGTATTTAGGACGTCTGGTGGTGTCATTCCCTCACAACAATAAGGCAGTGTGTTaGATATGCATTCGTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SIRGTEYLGRLVVSFPHNNKAVC*ICIRPV Trigger: CACAGGACGAATGCATATTCAACACACTGCCTTATT...GTTGTGAGGGAATGACACCACCAGACGTCCTAAATACTCGGTCCCGCGGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR-3UTR GCA 90 bp | GAATATGCATTCGTCCTGTGGAATGAACCACCACAGAAAGATCCACGGTACCATTCCTGGGGATTTCCTTaGAGAGGAGTGTCCGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: EYAFVLWNEPPQKDPRYHSWGFP*RGVSAE Trigger: CTCAGCGGACACTCCTCTGCAAGGAAATCCCCAGGA...ATGGTACCGTGGATCTTTCTGTGGTGGTTCATTCCACAGGACGAATGCATATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAAGGACGGCAAGGGCGCTaGATTGAAAGAGCATCCGCG | + |
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Preference number: 2 (lower is better) Translates to: FGHHQRSVSISIIALLSEGRQGR*IERASA Trigger: CGCGGATGCTCTTTCAATGCAGCGCCCTTGCCGTCC...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR CCA 90 bp | GTACGGCTCATGCCCATCGTCACGAGGAGTCAGGACATTCTTGAAAATGTGGATGATACAGCCAAGGACTaGGCCTCAACCTTTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VRLMPIVTRSQDILENVDDTAKD*ASTFRK Trigger: TTTCCTAAAGGTTGAGGCCCAGTCCTTGGCTGTATC...ATCCACATTTTCAAGAATGTCCTGACTCCTCGTGACGATGGGCATGAGCCGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTCTTGGAGGAGTCTTTGGAAGATTTGTTGTGATCCCTGGAAGGTTCTTTGAGGTGATTCACTGGTaGGTGGCCTTCAAGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: GFLGGVFGRFVVIPGRFFEVIHW*VAFKMQ Trigger: CTGCATCTTGAAGGCCACCCACCAGTGAATCACCTC...AAAGAACCTTCCAGGGATCACAACAAATCTTCCAAAGACTCCTCCAAGAAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGATCATTACATGGATACAGCCAAGGACTGGGCCTCAACCTTTAGGAAAGCAGGCTAATTCTTCCTaGGGATTTCCTTGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SKIITWIQPRTGPQPLGKQANSS*GFPCRG Trigger: TCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTG...CTTTCCTAAAGGTTGAGGCCCAGTCCTTGGCTGTATCCATGTAATGATCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAGGAGTCTTTGGAAGATTTGTTGTGATCCCTGGAAGGTTCTTTGAAGGCGAGGCTTTGAAAAACTaGTACTACTGCTGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LGGVFGRFVVIPGRFFEGEALKN*YYCCCC Trigger: GCAGCAGCAGCAGTAGTACCAGTTTTTCAAAGCCTC...GCCTTCAAAGAACCTTCCAGGGATCACAACAAATCTTCCAAAGACTCCTCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTACAAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGATCCTGGGGATTTCCTTaGAGAGGAGTGTCCGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LYKVDSGWQCLHNKKHHRSWGFP*RGVSAE Trigger: CTCAGCGGACACTCCTCTGCAAGGAAATCCCCAGGA...TCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTTGTAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCGGACGGCAAGGGCGCTaGATTGAAAGAGCATCCGCG | + |
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Preference number: 2 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVGRQGR*IERASA Trigger: CGCGGATGCTCTTTCAATGCAGCGCCCTTGCCGTCC...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTTTCTTTGGGTTTCTTGGAGGAGTCTTTGGAAGATTTGTTGTGATCCCTGCGGAGGTGATTCACTaGTGGGTGGCCTTCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: FVFFGFLGGVFGRFVVIPAEVIH*WVAFKM Trigger: CATCTTGAAGGCCACCCACCAGTGAATCACCTCCGC...AGGGATCACAACAAATCTTCCAAAGACTCCTCCAAGAAACCCAAAGAAAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAGGAGTCTTTGGAAGATTTGTTGTGATCCCTGGAAGGTTCTTTGAAGGCTGTAAGGTGGGTCTTTaGACAGAGAGTCTCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: LGGVFGRFVVIPGRFFEGCKVGL*TESLKC Trigger: ACATTTGAGACTCTCTGTGCAAAGACCCACCTTACA...GCCTTCAAAGAACCTTCCAGGGATCACAACAAATCTTCCAAAGACTCCTCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGGAAAGTAATAAGCATACAGCAAATTACTCTAGAGCTGACCACTTCCACATTCGTCCTGTGGAATaGACCACCACAGAAAGATCC | + |
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Preference number: 2 (lower is better) Translates to: KVESNKHTANYSRADHFHIRPVE*TTTERS Trigger: GGATCTTTCTGTGGTGGTTCATTCCACAGGACGAAT...GTGGAAGTGGTCAGCTCTAGAGTAATTTGCTGTATGCTTATTACTTTCCACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR TCA 90 bp | AAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGAAAACAGACTGACTCTACAGCATaGCTCTTAGCCTGCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KVDSGWQCLHNKKHHRKQTDSTA*LLACQE Trigger: TTCCTGGCAGGCTAAGAGTCATGCTGTAGAGTCAGT...CTGTTTTCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAGGAGCCCTCCACACACTACACACAAAATCAAAAGTTAATGTGTGTGTGGCTGAGTCTGTGGAATaGCTTTACCTCCATATTCAC | + |
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Preference number: 2 (lower is better) Translates to: TEGALHTLHTKSKVNVCVAESVE*LYLHIH Trigger: GTGAATATGGAGGTAAAGGCATTCCACAGACTCAGC...CACACACACATTAACTTTTGATTTTGTGTGTAGTGTGTGGAGGGCTCCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAAGACCATTTGAAAGACTaGCTCTACAGCATGACTCTT | + |
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Preference number: 2 (lower is better) Translates to: FGHHQRSVSISIIALLSEDHLKD*LYSMTL Trigger: AAGAGTCATGCTGTAGAGTCAGTCTTTCAAATGGTC...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR TCA 90 bp | AAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGAAAACAGGGGGGCAGAGTACGGTaGCAATATGAAGTAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: KVDSGWQCLHNKKHHRKQGGRVR*QYEVTV Trigger: TACAGTTACTTCATATTGTCACCGTACTCTGCCCCC...CTGTTTTCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR CCA 90 bp | TCACCTATACAGGAAATCCTTCTGGACACATCAGCAAGAGACTACACAGATACAAAGATGCTGAGTCTGTaGAATGCCTTTACCTCCATA | + |
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Preference number: 2 (lower is better) Translates to: SPIQEILLDTSARDYTDTKMLSL*NAFTSI Trigger: TATGGAGGTAAAGGCATTCCACAGACTCAGCATCTT...TGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAAGTGTACAGACAGCAGTaGCTTTGTCTTCCTTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: FGHHQRSVSISIIALLSEVYRQQ*LCLPLK Trigger: TTTCAAAGGAAGACAAAGCCACTGCTGTCTGTACAC...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR CAA 90 bp | CCACATTCCCAGCAGCCGTTGTCATCTCTACATCATAGCCATAGTTaGAGAACAACAGTCCAGAGCAAGATCATTCTGATAATATATGTA | + |
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Preference number: 2 (lower is better) Translates to: PHSQQPLSSLHHSHS*RTTVQSKIILIIYV Trigger: TACATATATTATCAGAATGATCTTGCTCTGGACTGTTGTTCTCAAACTATGGCTATGATGTAGAGATGACAACGGCTGCTGGGAATGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| 3UTR-3UTR TCA 90 bp | CTTTACAAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGAATGTGGCACATTCTTTaGGTGGAGCTGAAGGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: LYKVDSGWQCLHNKKHHRMWHIL*VELKGI Trigger: AATTCCCTTCAGCTCCACTCAAAGAATGTGCCACAT...TCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTTGTAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCAATTCAAATGATCCTATTTGGTACATCTACCATGTCCAAGATCATTACACCTGGGAAGAGTTGGTaGAAAGTGGCACAGTATACG | + |
|
Preference number: 2 (lower is better) Translates to: TAIQMILFGTSTMSKIITPGKSW*KVAQYT Trigger: CGTATACTGTGCCACTTTCCACCAACTCTTCCCAGG...TGTAATGATCTTGGACATGGTAGATGTACCAAATAGGATCATTTGAATTGCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAAAAGGTAGATTCAGGATaGCAGTGCCTACATAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: FGHHQRSVSISIIALLSEKVDSG*QCLHNK Trigger: TTTGTTATGTAGGCACTGCCATCCTGAATCTACCTT...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTGGAAAGTAATAAGCATACAGCAAATTACTCTAGAGCTGACCACTTCCACACACTAGTTAATCTCTaGATGAAAGGACAGCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: KVESNKHTANYSRADHFHTLVNL*MKGQHL Trigger: CAGATGCTGTCCTTTCATTCAGAGATTAACTAGTGT...GTGGAAGTGGTCAGCTCTAGAGTAATTTGCTGTATGCTTATTACTTTCCACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGAAAACAGATCATAGCCATAGTTTaGGAACAACAGTCCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KVDSGWQCLHNKKHHRKQIIAIV*EQQSRA Trigger: TGCTCTGGACTGTTGTTCTCAAACTATGGCTATGAT...CTGTTTTCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CAA 90 bp | AAATACATATTTACAGTGTACAGACAGCAGTGGCTTTGTCTTCCTTaGAAATTGACTGCATCTTTACAAGGTAGATTCAGGATGGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KYIFTVYRQQWLCLP*KLTASLQGRFRMAV Trigger: CACTGCCATCCTGAATCTACCTTGTAAAGATGCAGTCAATTTCAAAGGAAGACAAAGCCACTGCTGTCTGTACACTGTAAATATGTATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCGTTTTTAAGAAGAAATaGGTACCACACTGGCTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVVFKKK*VPHWLR Trigger: CCGCAGCCAGTGTGGTACTCATTTCTTCTTAAAAAC...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR-3UTR GCA 90 bp | TCACCTATACAGGAAATCCTTCTGGACACATCAGCAAGAGACTACACAGATACAGGGAGACAAGTGAAATaGTCACTAATAAATAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: SPIQEILLDTSARDYTDTGRQVK*SLINRF Trigger: GAATCTATTTATTAGTGAGCATTTCACTTGTCTCCC...TGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAGGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGTGGAAAGTAATAAGCATACAGCAAATTACTCTAGAGCTGACCACTTCCACTATCATTACAATAGCTaGCTTTCTTCTTACCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KVESNKHTANYSRADHFHYHYNS*LSSYPS Trigger: AGAGGGGTAAGAAGAAAGGCAGCTATTGTAATGATA...GTGGAAGTGGTCAGCTCTAGAGTAATTTGCTGTATGCTTATTACTTTCCACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCTCCAAGATCATTACATaGATACAGCCAAGGACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVSKIIT*IQPRTG Trigger: CCCAGTCCTTGGCTGTATCCATGTAATGATCTTGGA...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCAGAGTTGGTGGAAAGTaGCACAGTATACGAATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVRVGGK*HSIRIR Trigger: CCTTATTCGTATACTGTGCCACTTTCCACCAACTCT...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCAAGATGCTGAGTCTGTaGAATGCCTTTACCTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVKMLSL*NAFTSI Trigger: TATGGAGGTAAAGGCATTCCACAGACTCAGCATCTT...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACAAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGATCAAATGATCCTATTTaGTACATCTACCATGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LYKVDSGWQCLHNKKHHRSNDPI*YIYHVQ Trigger: TTGGACATGGTAGATGTACCAAATAGGATCATTTGA...TCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTTGTAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCTAATGTTATCATTACAATAGCTGCCTTTCTTCTTACCCCTCTCTTAAATTTGGTAACTATGTCCTaGAACTGGGAAAACAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SSNVIITIAAFLLTPLLNLVTMS*NWENKD Trigger: ATCTTTGTTTTCCCAGTTCCAGGACATAGTTACCAA...ATTTAAGAGAGGGGTAAGAAGAAAGGCAGCTATTGTAATGATAACATTAGAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR GCA 72 bp | GCTTTGAAAAACTGGTACTACTGCTGCTGCTGCTGCTaGTGCTACTGCTGCTGCTGCTGCTGCTACTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALKNWYYCCCCC*CYCCCCCCYCC Trigger: GCAGCAGTAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTACCAGTTTTTCAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| 3UTR GCA 72 bp | GAGGCTTTGAAAAACTGGTACTACTGCTGCTGCTGCTaGTGCTGCTACTGCTGCTGCTGCTGCTGCTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: EALKNWYYCCCC*CCYCCCCCCYC Trigger: GCAGTAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTACCAGTTTTTCAAAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| 3UTR TCA 72 bp | GCTCATGCCCATCGTCACGAGGAGTCAGGACATTCTTaGAAATGTGGATCCTGCTCCTCGAGGAGGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: AHAHRHEESGHS*KCGSCSSRRTL Trigger: CAGTGTCCTCCTCGAGGAGCAGGATCCACATTTTCAAGAATGTCCTGACTCCTCGTGACGATGGGCATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR GCA 72 bp | TGTGAGGCTTTGAAAAACTGGTACTACTGCTGCTGCTaGTGCTGCTGCTACTGCTGCTGCTGCTGCTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: CEALKNWYYCCC*CCCYCCCCCCY Trigger: GTAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTAGTACCAGTTTTTCAAAGCCTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGATCATTACATGGATACAGCCAAGGACTGGGCCTCAACCTTTAGGAAAGGGCAAGGGCGCTGCATaGAAAGAGCATCCGCGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKIITWIQPRTGPQPLGKGKGAA*KEHPRD Trigger: GTCCCGCGGATGCTCTTTCAATGCAGCGCCCTTGCC...CTTTCCTAAAGGTTGAGGCCCAGTCCTTGGCTGTATCCATGTAATGATCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR GCA 72 bp | ACTGCTGGTATGAATGCTCCTGTTAGGGTCCCCTCCTaGCTTCAGCAACTTTCTTCTAAAGTCCTCCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TAGMNAPVRVPS*LQQLSSKVLRG Trigger: CCCACGGAGGACTTTAGAAGAAAGTTGCTGAAGGCAGGAGGGGACCCTAACAGGAGCATTCATACCAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGGACGGCAAGGGCGCTTGTGTTGTGTCTGCTaGTTTTCAAGGCTATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKWHSIRIRSLGLGRQGRLCCVC*FSRLSR Trigger: CCTGGATAGCCTTGAAAACAAGCAGACACAACACAA...GCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR GCA 72 bp | AAAATAGAGACACGAGTGTTGGTGACAGCTCGGCACTaGTGGGCTGTGGACATCACAGGGACACTTTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KIETRVLVTARH*WAVDITGTLLF Trigger: GAACAAAAGTGTCCCTGTGATGTCCACAGCCCAGCAGTGCCGAGCTGTCACCAACACTCGTGTCTCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR GCA 72 bp | TGCAACTGCACACCAAGAAGAGGACTACACACCAAATaGTTCAAGTACGGCTCATGCCCATCGTCACGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CNCTPRRGLHTK*FKYGSCPSSRG Trigger: TCCTCGTGACGATGGGCATGAGCCGTACTTGAAGCATTTGGTGTGTAGTCCTCTTCTTGGTGTGCAGTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CCA 72 bp | ATAGAGACACGAGTGTTGGTGACAGCTCGGCACTGCTaGGCTGTGGACATCACAGGGACACTTTTGTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IETRVLVTARHC*AVDITGTLLFK Trigger: TTTGAACAAAAGTGTCCCTGTGATGTCCACAGCCCAGCAGTGCCGAGCTGTCACCAACACTCGTGTCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR TCA 72 bp | GTGGGGTTATTGAAAGTTAGTTTCTCACAGCGGAGGTaGTTCACTGGTGGGTGGCCTTCAAGATGCAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VGLLKVSFSQRR*FTGGWPSRCRN Trigger: ATTCCTGCATCTTGAAGGCCACCCACCAGTGAATCACCTCCGCTGTGAGAAACTAACTTTCAATAACCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| 3UTR GCA 72 bp | CTTGAAAATGTGGATCCTGCTCCTCGAGGAGGACACTaGAGGAACGCAATCTACAAAGACCATGGCTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LENVDPAPRGGH*RNAIYKDHGCF Trigger: AAAACAGCCATGGTCTTTGTAGATTGCGTTCCTGCAGTGTCCTCCTCGAGGAGCAGGATCCACATTTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR GCA 72 bp | AGAGGACTACACACCAAATGCTTCAAGTACGGCTCATaGCCATCGTCACGAGGAGTCAGGACATTCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGLHTKCFKYGS*PSSRGVRTFLK Trigger: TTTCAAGAATGTCCTGACTCCTCGTGACGATGGGCATGAGCCGTACTTGAAGCATTTGGTGTGTAGTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR GCA 72 bp | CGTACCCGGACTCTTCTACCTTGTAAGGTGGGTCTTTaGACAGAGAGTCTCAAATGTTCATCCCTGATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RTRTLLPCKVGL*TESLKCSSLMQ Trigger: TTGCATCAGGGATGAACATTTGAGACTCTCTGTGCAAAGACCCACCTTACAAGGTAGAAGAGTCCGGGTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTAATGTTATCATTACAATAGCTGCCTTTCTTCTTACCCCTCTCTTAAATATAAGGTCACTGGGCTaGGGACGGCAAGGGCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSNVIITIAAFLLTPLLNIRSLG*GRQGRC Trigger: GCAGCGCCCTTGCCGTCCCAAGCCCAGTGACCTTAT...ATTTAAGAGAGGGGTAAGAAGAAAGGCAGCTATTGTAATGATAACATTAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CCA 72 bp | AACAAGTTAAAGGACCTGGGAAGAGTTGGTGGAAAGTaGCACAGTATACGAATAAGGTCACTGGGCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NKLKDLGRVGGK*HSIRIRSLGLG Trigger: TCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCCACCAACTCTTCCCAGGTCCTTTAACTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR CCA 72 bp | AGACTGCAACAAGTTAAAGGACCTGGGAAGAGTTGGTaGAAAGTGGCACAGTATACGAATAAGGTCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RLQQVKGPGKSW*KVAQYTNKVTG Trigger: CCCAGTGACCTTATTCGTATACTGTGCCACTTTCCACCAACTCTTCCCAGGTCCTTTAACTTGTTGCAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR TCA 72 bp | CACATGTGTCAAAATATTCTTAACAGGGTCCAAGAGTaGGTGTACATAGATGTGGCAGGAGTGGTCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HMCQNILNRVQE*VYIDVAGVVCC Trigger: GCAGCAGACCACTCCTGCCACATCTATGTACACTCACTCTTGGACCCTGTTAAGAATATTTTGACACATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR TCA 72 bp | GAGTGGTCTGCTGCTAGAGAAATGTGGCACATTCTTTaGGTGGAGCTGAAGGGAATTCATGACTTCTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: EWSAAREMWHIL*VELKGIHDFCI Trigger: AATACAGAAGTCATGAATTCCCTTCAGCTCCACTCAAAGAATGTGCCACATTTCTCTAGCAGCAGACCACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CCA 72 bp | GTAATAAGGCAGTGTGTTGAATATGCATTCGTCCTGTaGAATGAACCACCACAGAAAGATCCACGGTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: VIRQCVEYAFVL*NEPPQKDPRYH Trigger: ATGGTACCGTGGATCTTTCTGTGGTGGTTCATTCCACAGGACGAATGCATATTCAACACACTGCCTTATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR CCA 72 bp | CATAGACTGCAACAAGTTAAAGGACCTGGGAAGAGTTaGTGGAAAGTGGCACAGTATACGAATAAGGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: HRLQQVKGPGKS*WKVAQYTNKVT Trigger: AGTGACCTTATTCGTATACTGTGCCACTTTCCACCAACTCTTCCCAGGTCCTTTAACTTGTTGCAGTCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR CCA 72 bp | CTATTTGGTACATCTACCATGTCCAAGATCATTACATaGATACAGCCAAGGACTGGGCCTCAACCTTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LFGTSTMSKIIT*IQPRTGPQPLG Trigger: TCCTAAAGGTTGAGGCCCAGTCCTTGGCTGTATCCATGTAATGATCTTGGACATGGTAGATGTACCAAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAGGAGCCCTCCACACACTACACACAAAATCAAAAGTTAATGTGTGTGTGTTGTGTTGTGTCTGCTaGTTTTCAAGGCTATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TEGALHTLHTKSKVNVCVLCCVC*FSRLSR Trigger: CCTGGATAGCCTTGAAAACAAGCAGACACAACACAA...CACACACACATTAACTTTTGATTTTGTGTGTAGTGTGTGGAGGGCTCCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAACAGACAGCAGTGGCTTaGTCTTCCTTTGAAATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FGHHQRSVSISIIALLSEQTAVA*SSFEID Trigger: GTCAATTTCAAAGGAAGACAAAGCCACTGCTGTCTG...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR TCA 72 bp | ACCACTCCATTATTAATCTGCATTTACATCACCGCTTaGAAGAACGGGTCCGGAAGACCATTTTCTGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: TTPLLICIYITA*KNGSGRPFSVQ Trigger: CTGTACAGAAAATGGTCTTCCGGACCCGTTCTTTCAAGCGGTGATGTAAATGCAGATTAATAATGGAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTATACAGGAAATCCTTCTGGACACATCAGCAAGAGACTACACAGATACAATCACAGGGACACTTTaGTTCAAAGTCCTACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPIQEILLDTSARDYTDTITGTL*FKVLQV Trigger: AACCTGTAGGACTTTGAACAAAAGTGTCCCTGTGAT...TGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR TCA 72 bp | TTGGGTTTCTTGGAGGAGTCTTTGGAAGATTTGTTGTaGTCCCTGGAAGGTTCTTTGAAGGCACTTTTATGT | + |
|
Preference number: 3 (lower is better) Translates to: LGFLEESLEDLL*SLEGSLKALLC Trigger: ACATAAAAGTGCCTTCAAAGAACCTTCCAGGGATCACAACAAATCTTCCAAAGACTCCTCCAAGAAACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| 3UTR TCA 72 bp | CTGCTAGAGAAATGTGGCACATTCTTTGAGTGGAGCTaGAGGGAATTCATGACTTCTGTATTTTCAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLEKCGTFFEWS*REFMTSVFSDH Trigger: ATGATCTGAAAATACAGAAGTCATGAATTCCCTTCAGCTCCACTCAAAGAATGTGCCACATTTCTCTAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCAGTCCTACAGGTTTATaGACTAAGGCTAGACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVSPTGL*TKARQQ Trigger: TTGCTGTCTAGCCTTAGTCAATAAACCTGTAGGACT...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR TCA 72 bp | ACAGGTTTATTGACTAAGGCTAGACAGCAATTCAAATaGTCCTATTTGGTACATCTACCATGTCCAAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: TGLLTKARQQFK*SYLVHLPCPRS Trigger: TGATCTTGGACATGGTAGATGTACCAAATAGGATCATTTGAATTGCTGTCTAGCCTTAGTCAATAAACCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR TCA 72 bp | CTCTTAAACAAGTGTGTTAATTACATTTGTAGGGCTTaGTATGGTAATGGGATGTTATGCAGGCCTAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLNKCVNYICRA*YGNGMLCRPNN Trigger: GTTATTAGGCCTGCATAACATCCCATTACCATATCAAGCCCTACAAATGTAATTAACACACTTGTTTAAGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCTGCTACTGCTGGTATGAATGCTCCTGTTAGGGTCCCCTCCTGCCTTGGTTTCTTCCTCACCTaGGCGCGGTGCCCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAAATAGMNAPVRVPSCLGFFLT*ARCPSS Trigger: GGAGCTGGGGCACCGCGCCCAGGTGAGGAAGAAACC...AAGGCAGGAGGGGACCCTAACAGGAGCATTCATACCAGCAGTAGCAGCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGGACGGCAAGGGCGCTGGTCTGGGATGGTGTaGAGCTGGAGCTGGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKWHSIRIRSLGLGRQGRWSGMV*SWSWNW Trigger: CCAGTTCCAGCTCCAGCTTCACACCATCCCAGACCA...GCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | GGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGGACGGCAAGGGCGCTGCTGCTGCTGCTGCTaGTACTGCTGGTATGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: GKWHSIRIRSLGLGRQGRCCCCC*YCWYEC Trigger: GCATTCATACCAGCAGTAGCAGCAGCAGCAGCAGCA...GCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCTAAAGTCCTCCGTGGGGTTATTGAAAGTTAGTTTCTCACAGCGGAGGCTCACCTGGGCGCGGTaGCCCAGCTCCAGCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: FLLKSSVGLLKVSFSQRRLTWAR*PSSSFT Trigger: GGTGAAGCTGGAGCTGGGGCACCGCGCCCAGGTGAG...CCTCCGCTGTGAGAAACTAACTTTCAATAACCCCACGGAGGACTTTAGAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| 3UTR CAA 72 bp | GGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTaGGGACGGCAAGGGCGCTGCATTGAAAGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GKWHSIRIRSLG*GRQGRCIERAS Trigger: GGATGCTCTTTCAATGCAGCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| 3UTR CAA 72 bp | GGCTCATGCCCATCGTCACGAGGAGTCAGGACATTCTaGAAAATGTGGATCCTGCTCCTCGAGGAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GSCPSSRGVRTF*KMWILLLEEDT Trigger: AGTGTCCTCCTCGAGGAGCAGGATCCACATTTTCAAGAATGTCCTGACTCCTCGTGACGATGGGCATGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | CAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCGCTGAGGCTGGTTTCTCCACAAAGTGCTaGATGTTACTGTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QANSSWGFPCRGVSAEAGFSTKC*MLLCSG Trigger: CCCGGAGCACAGTAACATTCAGCACTTTGTGGAGAA...ACCAGCCTCAGCGGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | GGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGGACGGCAAGGGCGCCCTCCGTGGGGTTATTaGAAGTTAGTTTCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKWHSIRIRSLGLGRQGRPPWGY*KLVSHS Trigger: GCTGTGAGAAACTAACTTTCAATAACCCCACGGAGG...GCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAACTCACCTGGGCGCGGTaGCCCAGCTCCAGCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: FGHHQRSVSISIIALLSELTWAR*PSSSFT Trigger: GGTGAAGCTGGAGCTGGGGCACCGCGCCCAGGTGAG...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGAGCCCTCCACACACTACACACAAAATCAAAAGTTAATGTGTGTGTGGGTTTCTTCCTCACCTaGGCGCGGTGCCCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TEGALHTLHTKSKVNVCVGFFLT*ARCPSS Trigger: GGAGCTGGGGCACCGCGCCCAGGTGAGGAAGAAACC...CACACACACATTAACTTTTGATTTTGTGTGTAGTGTGTGGAGGGCTCCTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | TTCAAGGCTATCCAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCCCTTGTTGCCTGGTCTaGGATGGTGTGAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKAIQANSSWGFPCRGVSPCCLV*DGVKLE Trigger: CTCCAGCTTCACACCATCCCAGACCAGGCAACAAGG...GGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTGGATAGCCTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGGGTTTCTTGGAGGAGTCTTTGGAAGATTTGTTGTGATCCCTGGAAGGCCATCCAGTCGTGGGTaGAGCCCTCCACTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFGFLGGVFGRFVVIPGRPSSRG*SPPLWV Trigger: AACCCACAGTGGAGGGCTTCACCCACGACTGGATGG...CCTTCCAGGGATCACAACAAATCTTCCAAAGACTCCTCCAAGAAACCCAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGCTATCCAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCGTTCTCCTCCACGTCTaGGTCATTGGGATCCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKAIQANSSWGFPCRGVSVLLHV*VIGIHD Trigger: ATCGTGGATCCCAATGACTCAGACGTGGAGGAGAAC...GGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTGGATAGCCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | GAATATGCATTCGTCCTGTGGAATGAACCACCACAGAAAGATCCACGGTACCATGGGAAGAGGCGGAGCTaGTTTCACTGTCACTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EYAFVLWNEPPQKDPRYHGKRRS*FHCHCR Trigger: ACGGCAGTGACAGTGAAAGCAGCTCCGCCTCTTCCC...ATGGTACCGTGGATCTTTCTGTGGTGGTTCATTCCACAGGACGAATGCATATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCCGCGGGACCGAGTATTTAGGACGTCTGGTGGTGTCATTCCCTCACAACATAAGGTTCACGATCTaGTGCAGAATGTGTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIRGTEYLGRLVVSFPHNIRFTI*CRMCRS Trigger: GGAACGACACATTCTGCAGCAGATCGTGAACCTTAT...GTTGTGAGGGAATGACACCACCAGACGTCCTAAATACTCGGTCCCGCGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | ACACCGTTCACCAACCACCTACTGTCCAAAATGACAGGATACGTATCTATGCAATTCTCACAGCGGAGGTaGTTCACTGGTGGGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPFTNHLLSKMTGYVSMQFSQRR*FTGGWP Trigger: AGGCCACCCACCAGTGAATCACCTCCGCTGTGAGAA...TTGCATAGATACGTATCCTGTCATTTTGGACAGTAGGTGGTTGGTGAACGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | GTACGGCTCATGCCCATCGTCACGAGGAGTCAGGACATTCTTGAAAATGTGGATGAGTTCTTCAGAATCTaGAGCAGGGGGCCTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRLMPIVTRSQDILENVDEFFRI*SRGPFA Trigger: AGCAAAAGGCCCCCTGCTTCAGATTCTGAAGAACTC...ATCCACATTTTCAAGAATGTCCTGACTCCTCGTGACGATGGGCATGAGCCGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | GAATATGCATTCGTCCTGTGGAATGAACCACCACAGAAAGATCCACGGTACCATTGTCAGCAGAACAAGTaGGTATCAGTGGGGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYAFVLWNEPPQKDPRYHCQQNK*VSVGAH Trigger: GTGCGCCCCCACTGATACTCACTTGTTCTGCTGACA...ATGGTACCGTGGATCTTTCTGTGGTGGTTCATTCCACAGGACGAATGCATATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | TCACCTATACAGGAAATCCTTCTGGACACATCAGCAAGAGACTACACAGATACAAGCTCCAGCTTCACCTaGACGGCACACGAGCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPIQEILLDTSARDYTDTSSSFT*TAHELA Trigger: GGCTAGCTCGTGTGCCGTGCAGGTGAAGCTGGAGCT...TGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCTATCCAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCAAAAACTGGTACTACTaGTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKAIQANSSWGFPCRGVSKNWYY*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGTAGTACCAGTTTTT...GGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTGGATAGCCTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | CGAGTATTTAGGACGTCTGGTGGTGTCATTCCCTCACAACTTTATCTGTATGTGGGGAAGAGGCGGAGCTaGTTTCACTGTCACTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RVFRTSGGVIPSQLYLYVGKRRS*FHCHCR Trigger: ACGGCAGTGACAGTGAAAGCAGCTCCGCCTCTTCCC...CACATACAGATAAAGTTGTGAGGGAATGACACCACCAGACGTCCTAAATACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| CDS-3UTR TCA 90 bp | CTATACAGGAAATCCTTCTGGACACATCAGCAAGAGACTACACAGATACAAAGTCCATCCAGTCGTGGGTaGAGCCCTCCACTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYRKSFWTHQQETTQIQSPSSRG*SPPLWV Trigger: AACCCACAGTGGAGGGCTTCACCCACGACTGGATGG...ACTTTGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCTATCCAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCATTGTCATTGTCCTCTaGCTCATCAGACTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKAIQANSSWGFPCRGVSIVIVL*LIRLLL Trigger: GAGGAGGAGTCTGATGAGGCAGAGGACAATGACAAT...GGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTGGATAGCCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| CDS-3UTR CCA 90 bp | CGAGTATTTAGGACGTCTGGTGGTGTCATTCCCTCACAACTTTATCTGTATGTGGCGGAGGTGATTCACTaGTGGGTGGCCTTCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RVFRTSGGVIPSQLYLYVAEVIH*WVAFKM Trigger: CATCTTGAAGGCCACCCACCAGTGAATCACCTCCGC...CACATACAGATAAAGTTGTGAGGGAATGACACCACCAGACGTCCTAAATACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | GTACGGCTCATGCCCATCGTCACGAGGAGTCAGGACATTCTTGAAAATGTGGATGAGGCTTTGAAAAACTaGTACTACTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLMPIVTRSQDILENVDEALKN*YYCCCC Trigger: GCAGCAGCAGCAGTAGTACCAGTTTTTCAAAGCCTC...ATCCACATTTTCAAGAATGTCCTGACTCCTCGTGACGATGGGCATGAGCCGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | TCACCTATACAGGAAATCCTTCTGGACACATCAGCAAGAGACTACACAGATACAAGCTGGAACTGGAGCTaGAGCTGGCAGGACTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPIQEILLDTSARDYTDTSWNWS*SWQDWV Trigger: AACCCAGTCCTGCCAGCTCCAGCTCCAGTTCCAGCT...TGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGTTTCTCACAGCGGAGGTGATTCACTGGTGGGTGGCCTTCAAGATGCATGTCCAAGCTCTTTTTaGCCTAGGGAAGCTTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLVSHSGGDSLVGGLQDACPSSF*PREAFV Trigger: CACGAAAGCTTCCCTAGGCCAAAAAGAGCTTGGACA...TGCATCTTGAAGGCCACCCACCAGTGAATCACCTCCGCTGTGAGAAACTAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCGCTGAGGCTGGTGTTGTATTCGTAATATaGAAGTGTCCAGTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QANSSWGFPCRGVSAEAGVVFVI*KCPVSS Trigger: AGAGGAAACTGGACACTTTCATATTACGAATACAAC...ACCAGCCTCAGCGGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGGAGTCTTTGGAAGATTTGTTGTGATCCCTGGAAGGTTCTTTGAAGGCCTAGGGAAGCTTTCGTaGAAGTGGAAGACGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGGVFGRFVVIPGRFFEGLGKLS*KWKTTF Trigger: GAAAGTCGTCTTCCACTTGCACGAAAGCTTCCCTAG...GCCTTCAAAGAACCTTCCAGGGATCACAACAAATCTTCCAAAGACTCCTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAACTGGCAGGACTGGGTTaGTCTGAGTCAGATTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGHHQRSVSISIIALLSELAGLG*SESDFE Trigger: CTCGAAATCTGACTCAGAGCAACCCAGTCCTGCCAG...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | GTACGGCTCATGCCCATCGTCACGAGGAGTCAGGACATTCTTGAAAATGTGGATGTCATTAACCTTCTGTaGAGCTCTACCAACTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VRLMPIVTRSQDILENVDVINLL*SSTNSS Trigger: AGATGAGTTGGTAGAGCTCCACAGAAGGTTAATGAC...ATCCACATTTTCAAGAATGTCCTGACTCCTCGTGACGATGGGCATGAGCCGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CAA 72 bp | CCGTGGGAATTGATTCCACCACATTCCCAGCAGCCGTaGTCATCTCTACATCATAGCCATAGTTTGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PWELIPPHSQQP*SSLHHSHSLRT Trigger: TGTTCTCAAACTATGGCTATGATGTAGAGATGACAACGGCTGCTGGGAATGTGGTGGAATCAATTCCCACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCTTTGGGTTTCTTGGAGGAGTCTTTGGAAGATTTGTTGTGATCCCTGGTTCTCCACAAAGTGCTaGATGTTACTGTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLWVSWRSLWKICCDPWFSTKC*MLLCSG Trigger: CCCGGAGCACAGTAACATTCAGCACTTTGTGGAGAA...CCAGGGATCACAACAAATCTTCCAAAGACTCCTCCAAGAAACCCAAAGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGATCATTACATGGATACAGCCAAGGACTGGGCCTCAACCTTTAGGAAAGAAGCTTTCGTGCAAGTaGAAGACGACTTTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SKIITWIQPRTGPQPLGKKLSCK*KTTFST Trigger: TGTGGAGAAAGTCGTCTTCCACTTGCACGAAAGCTT...CTTTCCTAAAGGTTGAGGCCCAGTCCTTGGCTGTATCCATGTAATGATCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGGTGGCCTTCAAGATGCAGGAATAAGTCATAATCAAAGCGGACTTTCTAAGCTTTCGTGCAAGTaGAAGACGACTTTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LVGGLQDAGISHNQSGLSKLSCK*KTTFST Trigger: TGTGGAGAAAGTCGTCTTCCACTTGCACGAAAGCTT...AGAAAGTCCGCTTTGATTATGACTTATTCCTGCATCTTGAAGGCCACCCACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| CDS-3UTR CCA 90 bp | CTTTACAAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGATTGCCTGGTCTGGGATaGTGTGAAGCTGGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYKVDSGWQCLHNKKHHRLPGLG*CEAGAG Trigger: TCCAGCTCCAGCTTCACACCATCCCAGACCAGGCAA...TCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTTGTAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CAA 72 bp | GTTTTTCCTTGTGCTCCTTCATTAATTTGTGAGGCTTaGAAAAACTGGTACTACTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFPCAPSLICEA*KNWYYCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGTAGTACCAGTTTTTCAAAGCCTCACAAATTAATGAAGGAGCACAAGGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGAAAACAGGTTAGGGTCCCCTCCTaGCTTCAGCAACTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVDSGWQCLHNKKHHRKQVRVPS*LQQLSS Trigger: AGAAGAAAGTTGCTGAAGGCAGGAGGGGACCCTAAC...CTGTTTTCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGAAAACAGCTTAAAGGACCTTGTTaGCTGGTCTGGGATGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVDSGWQCLHNKKHHRKQLKGPC*LVWDGV Trigger: CACACCATCCCAGACCAGGCAACAAGGTCCTTTAAG...CTGTTTTCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CAA 72 bp | CAGCAGCCGTTGTCATCTCTACATCATAGCCATAGTTaGAGAACAACAGTCCAGAGCAAGATCATTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: QQPLSSLHHSHS*RTTVQSKIILI Trigger: TATCAGAATGATCTTGCTCTGGACTGTTGTTCTCAAACTATGGCTATGATGTAGAGATGACAACGGCTGCTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | TCCAAGATCATTACATGGATACAGCCAAGGACTGGGCCTCAACCTTTAGGAAAGGTTGTATTCGTAATATaGAAGTGTCCAGTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKIITWIQPRTGPQPLGKVVFVI*KCPVSS Trigger: AGAGGAAACTGGACACTTTCATATTACGAATACAAC...CTTTCCTAAAGGTTGAGGCCCAGTCCTTGGCTGTATCCATGTAATGATCTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCGAGGTGATTCACTGGTaGGTGGCCTTCAAGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVEVIHW*VAFKMQ Trigger: CTGCATCTTGAAGGCCACCCACCAGTGAATCACCTC...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGAGCCCTCCACACACTACACACAAAATCAAAAGTTAATGTGTGTGTGTCTTGGAGGAGTCTTTaGAAGATTTGTTGTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: TEGALHTLHTKSKVNVCVSWRSL*KICCDP Trigger: GGGATCACAACAAATCTTCCAAAGACTCCTCCAAGA...CACACACACATTAACTTTTGATTTTGTGTGTAGTGTGTGGAGGGCTCCTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CAA 72 bp | ACTAGGCTGTTAGCACACGTAGACTCTCTTAAGGCTTaGGATCCAGAAGTCTTCTTCATTCCTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRLLAHVDSLKA*DPEVFFIPFLF Trigger: GAAAAGAAAAGGAATGAAGAAGACTTCTGGATCCAAAGCCTTAAGAGAGTCTACGTGTGCTAACAGCCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CAA 72 bp | AACCACTCCATTATTAATCTGCATTTACATCACCGCTaGAAAGAACGGGTCCGGAAGACCATTTTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: NHSIINLHLHHR*KERVRKTIFCT Trigger: TGTACAGAAAATGGTCTTCCGGACCCGTTCTTTCAAGCGGTGATGTAAATGCAGATTAATAATGGAGTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR TCA 90 bp | CTATACAGGAAATCCTTCTGGACACATCAGCAAGAGACTACACAGATACAAAGTTGCTTTTGGCTCTTTTaGCATGGGTTTAGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYRKSFWTHQQETTQIQSCFWLF*HGFRFL Trigger: AAGGAACCTAAACCCATGTCAAAAGAGCCAAAAGCA...ACTTTGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | ACAGCAATTCAAATGATCCTATTTGGTACATCTACCATGTCCAAGATCATTACATGCTGCTGCTGCTACTaGTGGTATGAATGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAIQMILFGTSTMSKIITCCCCY*WYECSC Trigger: ACAGGAGCATTCATACCAGCAGTAGCAGCAGCAGCA...TGTAATGATCTTGGACATGGTAGATGTACCAAATAGGATCATTTGAATTGCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | AGCTCTAATGTTATCATTACAATAGCTGCCTTTCTTCTTACCCCTCTCTTAAATCTAGGGAAGCTTTCGTaGAAGTGGAAGACGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSNVIITIAAFLLTPLLNLGKLS*KWKTTF Trigger: GAAAGTCGTCTTCCACTTGCACGAAAGCTTCCCTAG...ATTTAAGAGAGGGGTAAGAAGAAAGGCAGCTATTGTAATGATAACATTAGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR GCA 90 bp | ACAGCAATTCAAATGATCCTATTTGGTACATCTACCATGTCCAAGATCATTACAATTGTCATTGTCCTCTaGCTCATCAGACTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAIQMILFGTSTMSKIITIVIVL*LIRLLL Trigger: GAGGAGGAGTCTGATGAGGCAGAGGACAATGACAAT...TGTAATGATCTTGGACATGGTAGATGTACCAAATAGGATCATTTGAATTGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAATTCAAATGATCCTATTTGGTACATCTACCATGTCCAAGATCATTACACCCTGGAAGGTTCTTTaGAGGCACTTTTATGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAIQMILFGTSTMSKIITPWKVL*RHFYVL Trigger: GAGAACATAAAAGTGCCTTCAAAGAACCTTCCAGGG...TGTAATGATCTTGGACATGGTAGATGTACCAAATAGGATCATTTGAATTGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR GCA 90 bp | CTTTACAAGGTAGATTCAGGATGGCAGTGCCTACATAACAAAAAGCATCATAGATCGTTGTCATCAGAATaGAGATCTTTCATGATCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYKVDSGWQCLHNKKHHRSLSSE*RSFMID Trigger: GTCGATCATGAAAGATCTGCATTCTGATGACAACGA...TCTATGATGCTTTTTGTTATGTAGGCACTGCCATCCTGAATCTACCTTGTAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR CCA 90 bp | ACAGCAATTCAAATGATCCTATTTGGTACATCTACCATGTCCAAGATCATTACATTTGCACACTCTTTTTaGCCTAGGGAAGCTTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAIQMILFGTSTMSKIITFAHSF*PREAFV Trigger: CACGAAAGCTTCCCTAGGCCAAAAAGAGTGTGCAAA...TGTAATGATCTTGGACATGGTAGATGTACCAAATAGGATCATTTGAATTGCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR CCA 90 bp | AGCTCTAATGTTATCATTACAATAGCTGCCTTTCTTCTTACCCCTCTCTTAAATACAAGTGAGTATCAGTaGGGGCGCACTAGAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSNVIITIAAFLLTPLLNTSEYQ*GRTRKT Trigger: AGTTTTTCTAGTGCGCCCCCACTGATACTCACTTGT...ATTTAAGAGAGGGGTAAGAAGAAAGGCAGCTATTGTAATGATAACATTAGAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR TCA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCTTGGAAGATTTGTTGTaGTCCCTGGAAGGTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVLEDLL*SLEGSL Trigger: CAAAGAACCTTCCAGGGATCACAACAAATCTTCCAA...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR TCA 90 bp | AGCTCTAATGTTATCATTACAATAGCTGCCTTTCTTCTTACCCCTCTCTTAAATAATGCAGATCTTTCATaGTCGACCTTAAAGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSNVIITIAAFLLTPLLNNADLS*STLKDL Trigger: AAGGTCCTTTAAGGTCGATCATGAAAGATCTGCATT...ATTTAAGAGAGGGGTAAGAAGAAAGGCAGCTATTGTAATGATAACATTAGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR CCA 90 bp | AGCTCTAATGTTATCATTACAATAGCTGCCTTTCTTCTTACCCCTCTCTTAAATTTCTACCTTGTAAGGTaGGTCTTTGCACACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSNVIITIAAFLLTPLLNFYLVR*VFAHSF Trigger: AAAAGAGTGTGCAAAGACCCACCTTACAAGGTAGAA...ATTTAAGAGAGGGGTAAGAAGAAAGGCAGCTATTGTAATGATAACATTAGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| 3UTR CAA 72 bp | AAAATACATATTTACAGTGTACAGACAGCAGTGGCTTaGTCTTCCTTTGAAATTGACTGCATCTTTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIHIYSVQTAVA*SSFEIDCIFTR Trigger: CCTTGTAAAGATGCAGTCAATTTCAAAGGAAGACAAAGCCACTGCTGTCTGTACACTGTAAATATGTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CAA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAATTGCTGGGCGCCTTCTaGTCCTGCTGCCCACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FGHHQRSVSISIIALLSELLGAF*SCCPLV Trigger: CACCAGTGGGCAGCAGGACAAGAAGGCGCCCAGCAA...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CAA 90 bp | AGCATCCGCGGGACCGAGTATTTAGGACGTCTGGTGGTGTCATTCCCTCACAACTTACGGACTGTAGTTTaGTCCAGCGAGCAAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SIRGTEYLGRLVVSFPHNLRTVV*SSEQRS Trigger: TGATCTTTGCTCGCTGGACAAAACTACAGTCCGTAA...GTTGTGAGGGAATGACACCACCAGACGTCCTAAATACTCGGTCCCGCGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGGACGGCAAGGGCGCTTAATTTGTGAGGCTTaGAAAAACTGGTACTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKWHSIRIRSLGLGRQGRLICEA*KNWYYC Trigger: GCAGTAGTACCAGTTTTTCAAAGCCTCACAAATTAA...GCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CAA 90 bp | GGAAAGTGGCACAGTATACGAATAAGGTCACTGGGCTTGGGACGGCAAGGGCGCATAAGGTTCACGATCTaGTCACATTCACCATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKWHSIRIRSLGLGRQGRIRFTI*SHSPFF Trigger: AAAGAATGGTGAATGTGACAAGATCGTGAACCTTAT...GCGCCCTTGCCGTCCCAAGCCCAGTGACCTTATTCGTATACTGTGCCACTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126353.8 |
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| CDS GCA 90 bp | TCATTGTCCTCTGCCTCATCAGACTCCTCCTCGTTGTCATCAGAATaGAGATCTTTCATGATCGACCTTAAAGGACCTTGTTGCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSASSDSSSLSSE*RSFMIDLKGPCCLV Trigger: GACCAGGCAACAAGGTCCTTTAAGGTCGATCATGAAAGATCTGCATTCTGATGACAACGAGGAGGAGTCTGATGAGGCAGAGGACAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS CCA 90 bp | CTGAGTCAGATTTCGAGGACATGTTCTCCTCCACGTCTGAGTCATTaGGATCCACGATGTCATCAAACGGTGGCAACATTGACTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSQISRTCSPPRLSH*DPRCHQTVATLTSS Trigger: AGAAGAAGTCAATGTTGCCACCGTTTGATGACATCGTGGATCCCAATGACTCAGACGTGGAGGAGAACATGTCCTCGAAATCTGACTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGCTATCCAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCCAAACGGTGGCAACATaGACTTCTTCTTCTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FKAIQANSSWGFPCRGVSQTVAT*TSSSLK Trigger: CTTCAGAGAAGAAGAAGTCAATGTTGCCACCGTTTG...GGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTGGATAGCCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CAA 90 bp | TCCAAGATCATTACATGGATACAGCCAAGGACTGGGCCTCAACCTTTAGGAAAGTCCGAGTCATTGTCATaGTCCTCTGCCTCATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SKIITWIQPRTGPQPLGKSESLS*SSASSD Trigger: GTCTGATGAGGCAGAGGACAATGACAATGACTCGGA...CTTTCCTAAAGGTTGAGGCCCAGTCCTTGGCTGTATCCATGTAATGATCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCGCTGAGGCTGGTTCATCTAGATATGCCTaGTCACATTCACCATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QANSSWGFPCRGVSAEAGSSRYA*SHSPFF Trigger: AAAGAATGGTGAATGTGACAAGGCATATCTAGATGA...ACCAGCCTCAGCGGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGCTATCCAGGCTAATTCTTCCTGGGGATTTCCTTGCAGAGGAGTGTCCTTACGGACTGTAGTTTaGTCCAGCGAGCAAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: FKAIQANSSWGFPCRGVSLRTVV*SSEQRS Trigger: TGATCTTTGCTCGCTGGACAAAACTACAGTCCGTAA...GGACACTCCTCTGCAAGGAAATCCCCAGGAAGAATTAGCCTGGATAGCCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGGAGCCCTCCACACACTACACACAAAATCAAAAGTTAATGTGTGTGTGTCCACGTCTGAGTCATaGGGATCCACGATGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TEGALHTLHTKSKVNVCVSTSES*GSTMSS Trigger: TGATGACATCGTGGATCCCAATGACTCAGACGTGGA...CACACACACATTAACTTTTGATTTTGTGTGTAGTGTGTGGAGGGCTCCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR CAA 90 bp | CGAGTATTTAGGACGTCTGGTGGTGTCATTCCCTCACAACTTTATCTGTATGTGTCAGACTCCTCCTCGTaGTCATCAGAATGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RVFRTSGGVIPSQLYLYVSDSSS*SSECRS Trigger: AGATCTGCATTCTGATGACAACGAGGAGGAGTCTGA...CACATACAGATAAAGTTGTGAGGGAATGACACCACCAGACGTCCTAAATACTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| CDS-3UTR CAA 90 bp | TCACCTATACAGGAAATCCTTCTGGACACATCAGCAAGAGACTACACAGATACATCCATCTCCGAGTCATaGTCATTGTCCTCTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPIQEILLDTSARDYTDTSISES*SLSSAS Trigger: TGAGGCAGAGGACAATGACAATGACTCGGAGATGGA...TGTATCTGTGTAGTCTCTTGCTGATGTGTCCAGAAGGATTTCCTGTATAGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| CDS-3UTR CAA 90 bp | GGAATGAACCACCACAGAAAGATCCACGGTACCATACACATTCTTTTAAGTTTTTCCGAGTCATTGTCATaGTCCTCTGCCTCATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GMNHHRKIHGTIHILLSFSESLS*SSASSD Trigger: GTCTGATGAGGCAGAGGACAATGACAATGACTCGGA...AAAACTTAAAAGAATGTGTATGGTACCGTGGATCTTTCTGTGGTGGTTCATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| CDS-3UTR CAA 90 bp | TTTGGCCACCATCAAAGATCTGTCAGCATTTCCATCATAGCTCTGCTTTCAGAAAGTGGTTTGTTTTCTTaGGGTTTCTTGGAGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FGHHQRSVSISIIALLSESGLFS*GFLEES Trigger: AGACTCCTCCAAGAAACCCAAAGAAAACAAACCACT...TTCTGAAAGCAGAGCTATGATGGAAATGCTGACAGATCTTTGATGGTGGCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR CAA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCTCCATCTCCGAGTCATaGTCATTGTCCTCTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVSISES*SLSSAS Trigger: TGAGGCAGAGGACAATGACAATGACTCGGAGATGGA...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 |
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| CDS TCA 90 bp | TTGTCCAGCGAGCAAAGATCAAAATCAAATGTTGTATTCGTAATATaGAAGTGTCCAGTTTCCTCTATAAGGTTCACGATCTGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSEQRSKSNVVFVI*KCPVSSIRFTICCR Trigger: TCTGCAGCAGATCGTGAACCTTATAGAGGAAACTGGACACTTTCATATTACGAATACAACATTTGATTTTGATCTTTGCTCGCTGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078090.12 ENSMUST00000148059.2 ENSMUST00000149357.8 |
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| CDS-3UTR CAA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCATGGGTTTAGGTTCCTaGAAGGCCATCTTAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVMGLGS*KAILGT Trigger: AGTTCCTAAGATGGCCTTCAAGGAACCTAAACCCAT...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR CAA 90 bp | AGCTCTAATGTTATCATTACAATAGCTGCCTTTCTTCTTACCCCTCTCTTAAATAGTTACTGTCTGCTTTaGGCTCTTTTGACATGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSNVIITIAAFLLTPLLNSYCLL*ALLTWV Trigger: AACCCATGTCAAAAGAGCCAAAAGCAGACAGTAACT...ATTTAAGAGAGGGGTAAGAAGAAAGGCAGCTATTGTAATGATAACATTAGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS-3UTR CAA 90 bp | AGCAAGAGACTACACAGATACAAAGTTACCAAATCTACAAGTGAATACATAGTCGTCTCACTCTCAATTTaGACCTTTCCCATCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SKRLHRYKVTKSTSEYIVVSLSI*TFPILT Trigger: TGTCAAGATGGGAAAGGTCAAAATTGAGAGTGAGAC...GACTATGTATTCACTTGTAGATTTGGTAACTTTGTATCTGTGTAGTCTCTTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS TCA 90 bp | TTGTCCAGCGAGCAAAGATCAAAATCAAATGTTGTATTCGTAATATaGAAGTGTCCAGTTTCCTCTATAAGGTTCACGATCTTGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSEQRSKSNVVFVI*KCPVSSIRFTILSH Trigger: ATGTGACAAGATCGTGAACCTTATAGAGGAAACTGGACACTTTCATATTACGAATACAACATTTGATTTTGATCTTTGCTCGCTGGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126353.8 |
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| CDS GCA 72 bp | GCAGGGGGCCTTTTGCTGGGCGCCTTCTTGTCCTGCTaGCCACTGGTGACGGTGAGTAAGTTACTGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGGLLLGAFLSC*PLVTVSKLLSA Trigger: AGCAGACAGTAACTTACTCACCGTCACCAGTGGGCAGCAGGACAAGAAGGCGCCCAGCAAAAGGCCCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS GCA 72 bp | GAAGCAGGGGGCCTTTTGCTGGGCGCCTTCTTGTCCTaGTGCCCACTGGTGACGGTGAGTAAGTTACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: EAGGLLLGAFLS*CPLVTVSKLLS Trigger: AGACAGTAACTTACTCACCGTCACCAGTGGGCAGCAGGACAAGAAGGCGCCCAGCAAAAGGCCCCCTGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS CAA 72 bp | GCTGAGAGTTCTTCAGAATCTGAAGCAGGGGGCCTTTaGCTGGGCGCCTTCTTGTCCTGCTGCCCACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AESSSESEAGGL*LGAFLSCCPLV Trigger: CACCAGTGGGCAGCAGGACAAGAAGGCGCCCAGCAAAAGGCCCCCTGCTTCAGATTCTGAAGAACTCTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS TCA 72 bp | GGAACTGGAGCTGGAGCTGGCAGGACTGGGTTGCTCTaGGTCAGATTTCGAGGACATGTTCTCCTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: GTGAGAGRTGLL*VRFRGHVLLHV Trigger: GACGTGGAGGAGAACATGTCCTCGAAATCTGACTCAGAGCAACCCAGTCCTGCCAGCTCCAGCTCCAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS CAA 72 bp | GAATCTGAAGCAGGGGGCCTTTTGCTGGGCGCCTTCTaGTCCTGCTGCCCACTGGTGACGGTGAGTAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ESEAGGLLLGAF*SCCPLVTVSKL Trigger: TAACTTACTCACCGTCACCAGTGGGCAGCAGGACAAGAAGGCGCCCAGCAAAAGGCCCCCTGCTTCAGATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS TCA 72 bp | TCGTGCAAGTGGAAGACGACTTTCTCCACAAAGTGCTaGATGTTACTGTGCTCCGGGCCGCGCACGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: SCKWKTTFSTKC*MLLCSGPRTNT Trigger: GGTGTTCGTGCGCGGCCCGGAGCACAGTAACATTCAGCACTTTGTGGAGAAAGTCGTCTTCCACTTGCACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000142454.2 |
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| CDS CAA 90 bp | AGTTCTTCAGAATCTGAAGCAGGGGGCCTTTTGCTGGGCGCCTTCTaGTCCTGCTGCCCACTGGTGACGGTGAGTAAGTTACTGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSESEAGGLLLGAF*SCCPLVTVSKLLSA Trigger: AGCAGACAGTAACTTACTCACCGTCACCAGTGGGCAGCAGGACAAGAAGGCGCCCAGCAAAAGGCCCCCTGCTTCAGATTCTGAAGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
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| CDS CCA 72 bp | TTCATGATCGACCTTAAAGGACCTTGTTGCCTGGTCTaGGATGGTGTGAAGCTGGAGCTGGAACTGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FMIDLKGPCCLV*DGVKLELELEL Trigger: CAGCTCCAGTTCCAGCTCCAGCTTCACACCATCCCAGACCAGGCAACAAGGTCCTTTAAGGTCGATCATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS CCA 72 bp | ACTCCTCAGCCATCTCCACTCTGTCCAAGCTCTTTTTaGCCTAGGGAAGCTTTCGTGCAAGTGGAAGACGAC | + |
|
Preference number: 6 (lower is better) Translates to: TPQPSPLCPSSF*PREAFVQVEDD Trigger: GTCGTCTTCCACTTGCACGAAAGCTTCCCTAGGCCAAAAAGAGCTTGGACAGAGTGGAGATGGCTGAGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142454.2 |
||
| CDS TCA 72 bp | ACTCCTCCTCGTTGTCATCAGAATGCAGATCTTTCATaGTCGACCTTAAAGGACCTTGTTGCCTGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPPRCHQNADLS*STLKDLVAWSG Trigger: CCCAGACCAGGCAACAAGGTCCTTTAAGGTCGATCATGAAAGATCTGCATTCTGATGACAACGAGGAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS CCA 72 bp | ATTTCGAGGACATGTTCTCCTCCACGTCTGAGTCATTaGGATCCACGATGTCATCAAACGGTGGCAACATTG | + |
|
Preference number: 6 (lower is better) Translates to: ISRTCSPPRLSH*DPRCHQTVATL Trigger: CAATGTTGCCACCGTTTGATGACATCGTGGATCCCAATGACTCAGACGTGGAGGAGAACATGTCCTCGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS CAA 72 bp | GATTTCGAGGACATGTTCTCCTCCACGTCTGAGTCATaGGGATCCACGATGTCATCAAACGGTGGCAACATT | + |
|
Preference number: 6 (lower is better) Translates to: DFEDMFSSTSES*GSTMSSNGGNI Trigger: AATGTTGCCACCGTTTGATGACATCGTGGATCCCAATGACTCAGACGTGGAGGAGAACATGTCCTCGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS CAA 90 bp | TCTGAGTCAGATTTCGAGGACATGTTCTCCTCCACGTCTGAGTCATaGGGATCCACGATGTCATCAAACGGTGGCAACATTGACTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SESDFEDMFSSTSES*GSTMSSNGGNIDFF Trigger: GAAGAAGTCAATGTTGCCACCGTTTGATGACATCGTGGATCCCAATGACTCAGACGTGGAGGAGAACATGTCCTCGAAATCTGACTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS CAA 90 bp | CTTCCTCCTCTATTTACAGGTCTTTCCATCTCCGAGTCATTGTCATaGTCCTCTGCCTCATCAGACTCCTCCTCGTTGTCATCAGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: LPPLFTGLSISESLS*SSASSDSSSLSSEC Trigger: GCATTCTGATGACAACGAGGAGGAGTCTGATGAGGCAGAGGACAATGACAATGACTCGGAGATGGAAAGACCTGTAAATAGAGGAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 ENSMUST00000149357.8 |
||
| CDS GCA 72 bp | TCTGCCTCATCAGACTCCTCCTCGTTGTCATCAGAATaGAGATCTTTCATGATCGACCTTAAAGGACCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SASSDSSSLSSE*RSFMIDLKGPC Trigger: ACAAGGTCCTTTAAGGTCGATCATGAAAGATCTGCATTCTGATGACAACGAGGAGGAGTCTGATGAGGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS CCA 72 bp | AGAATGTGTCGTTCCCTCAGTGTCATTAACCTTCTGTaGAGCTCTACCAACTCATCTAGATATGCCTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RMCRSLSVINLL*SSTNSSRYALS Trigger: TGACAAGGCATATCTAGATGAGTTGGTAGAGCTCCACAGAAGGTTAATGACACTGAGGGAACGACACATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078090.12 ENSMUST00000149357.8 |
||
| CDS CAA 72 bp | CATTGGGATCCACGATGTCATCAAACGGTGGCAACATaGACTTCTTCTTCTCTGAAGTCTCACTCTCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: HWDPRCHQTVAT*TSSSLKSHSQF Trigger: AAATTGAGAGTGAGACTTCAGAGAAGAAGAAGTCAATGTTGCCACCGTTTGATGACATCGTGGATCCCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078090.12 |
||
| CDS TCA 72 bp | GAGCAAAGATCAAAATCAAATGTTGTATTCGTAATATaGAAGTGTCCAGTTTCCTCTATAAGGTTCACGATC | + |
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Preference number: 6 (lower is better) Translates to: EQRSKSNVVFVI*KCPVSSIRFTI Trigger: GATCGTGAACCTTATAGAGGAAACTGGACACTTTCATATTACGAATACAACATTTGATTTTGATCTTTGCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078090.12 ENSMUST00000126353.8 ENSMUST00000148059.2 ENSMUST00000149357.8 |
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