Pregenerated sensors for MLLT11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053192Ensembl transcript IDs: ENSMUST00000065482.6, ENSMUST00000196025.5, ENSMUST00000198948.5
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAATCTGATTTTCTGAGCATTTCTACCCACAGCTGGAAGCAGAGCTaGATATTAAAGGAGCTACCTCTGAAACGGTGCGATGTTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: KSDFLSISTHSWKQS*ILKELPLKRCDVFP Trigger: AGGAAAAACATCGCACCGTTTCAGAGGTAGCTCCTTTAATATCCAGCTCTGCTTCCAGCTGTGGGTAGAAATGCTCAGAAAATCAGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR CAA 90 bp | GAGCTACCTCTGAAACGGTGCGATGTTTTTCCTCATCCCACTCCTTaGTTTCCCACCTTTAACTGCCTGCGTGTTTCTGGGGAAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ELPLKRCDVFPHPTP*FPTFNCLRVSGEEN Trigger: ATTCTCTTCCCCAGAAACACGCAGGCAGTTAAAGGTGGGAAACAAAGGAGTGGGATGAGGAAAAACATCGCACCGTTTCAGAGGTAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR-3UTR GCA 90 bp | CCCACTCCTTTGTTTCCCACCTTTAACTGCCTGCGTGTTTCTGGGGAAGAGAATATTGGTCTCCCATTTTaGACAACTGTACCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PTPLFPTFNCLRVSGEENIGLPF*TTVPLC Trigger: ACAGAGAGGTACAGTTGTGCAAAATGGGAGACCAAT...ATTCTCTTCCCCAGAAACACGCAGGCAGTTAAAGGTGGGAAACAAAGGAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTGAGCATTTCTACCCACAGCTGGAAGCAGAGCTGGATATTAAAGGAGCTTTCTGGGGAAGAGAATaGATTGTAAGCAGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: FSEHFYPQLEAELDIKGAFWGRE*IVSSSS Trigger: GCTGCTGCTGCTTACAATGCATTCTCTTCCCCAGAA...AGCTCCTTTAATATCCAGCTCTGCTTCCAGCTGTGGGTAGAAATGCTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR CAA 90 bp | AGTGTCTCAAAACTTCCAGGTTCTCATTACTTCTTGAAGCAGTATTaGCTTACTGGCCTGGTAGAGGACATTAGGGAGGCTCAAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: SVSKLPGSHYFLKQY*LTGLVEDIREAQVI Trigger: GATTACTTGAGCCTCCCTAATGTCCTCTACCAGGCCAGTAAGCAAATACTGCTTCAAGAAGTAATGAGAACCTGGAAGTTTTGAGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAACTGTGTCAGGAATCACTGATTCCTATCACATACTGCAACTACAGAAACTACCTCTGAAACGGTaGGATGTTTTTCCTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: QRTVSGITDSYHILQLQKLPLKR*DVFPHP Trigger: GGGATGAGGAAAAACATCGCACCGTTTCAGAGGTAG...TTTCTGTAGTTGCAGTATGTGATAGGAATCAGTGATTCCTGACACAGTTCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR GCA 72 bp | TGGAAGGAATGGGGACGGGTAGGGTCTGAACATAACTaGTTACTTCACGGTCTTATGGCGGCCAAAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: WKEWGRVGSEHN*LLHGLMAAKEL Trigger: CAGTTCTTTGGCCGCCATAAGACCGTGAAGTAAGCAGTTATGTTCAGACCCTACCCGTCCCCATTCCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR GCA 72 bp | CTCATCCCACTCCTTTGTTTCCCACCTTTAACTGCCTaGGTGTTTCTGGGGAAGAGAATGCATTGTAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LIPLLCFPPLTA*VFLGKRMHCKQ Trigger: CTGCTTACAATGCATTCTCTTCCCCAGAAACACGCAGGCAGTTAAAGGTGGGAAACAAAGGAGTGGGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR GCA 72 bp | CAGAGCTGGATATTAAAGGAGCTACCTCTGAAACGGTaGGATGTTTTTCCTCATCCCACTCCTTTGTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: QSWILKELPLKR*DVFPHPTPLFP Trigger: GGGAAACAAAGGAGTGGGATGAGGAAAAACATCGCACCGTTTCAGAGGTAGCTCCTTTAATATCCAGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR-3UTR CAA 90 bp | CATCCCACTCCTTTGTTTCCCACCTTTAACTGCCTGCGTGTTTCTGGGGAAGAGGGTTCTCATTACTTCTaGAAGCAGTATTTGCTTACT | + |
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Preference number: 3 (lower is better) Translates to: HPTPLFPTFNCLRVSGEEGSHYF*KQYLLT Trigger: AGTAAGCAAATACTGCTTCAAGAAGTAATGAGAACC...CTCTTCCCCAGAAACACGCAGGCAGTTAAAGGTGGGAAACAAAGGAGTGGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR-3UTR CAA 90 bp | CTGCTTACTTCACGGTCTTATGGCGGCCAAAGAACTGTGTCAGGAATCACTGATAAACCTACAATTCAATaGGCAGATTCATCAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: LLTSRSYGGQRTVSGITDKPTIQ*ADSSAP Trigger: TGGTGCTGATGAATCTGCCAATTGAATTGTAGGTTT...ATCAGTGATTCCTGACACAGTTCTTTGGCCGCCATAAGACCGTGAAGTAAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR TCA 72 bp | GTCTTATGGCGGCCAAAGAACTGTGTCAGGAATCACTaGTTCCTATCACATACTGCAACTACAGAAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: VLWRPKNCVRNH*FLSHTATTERQ Trigger: TTGCCTTTCTGTAGTTGCAGTATGTGATAGGAATCAGTGATTCCTGACACAGTTCTTTGGCCGCCATAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR-3UTR CAA 90 bp | CAAAGAACTGTGTCAGGAATCACTGATTCCTATCACATACTGCAACTACAGAAACCTCATCCCACTCCTTaGTTTCCCACCTTTAACTGC | + |
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Preference number: 3 (lower is better) Translates to: QRTVSGITDSYHILQLQKPHPTP*FPTFNC Trigger: GCAGTTAAAGGTGGGAAACAAAGGAGTGGGATGAGG...TTTCTGTAGTTGCAGTATGTGATAGGAATCAGTGATTCCTGACACAGTTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| 3UTR GCA 72 bp | GAACTGTGTCAGGAATCACTGATTCCTATCACATACTaGAACTACAGAAAGGCAAAGCTAAAATACTTAGGA | + |
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Preference number: 3 (lower is better) Translates to: ELCQESLIPITY*NYRKAKLKYLG Trigger: TCCTAAGTATTTTAGCTTTGCCTTTCTGTAGTTGCAGTATGTGATAGGAATCAGTGATTCCTGACACAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR TCA 90 bp | CCCACTCCTTTGTTTCCCACCTTTAACTGCCTGCGTGTTTCTGGGGAAGAGAATGTAGGTAGGTGTATCTaGCAGGCCCAGGCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PTPLFPTFNCLRVSGEENVGRCI*QAQAFQ Trigger: CTGGAAGGCCTGGGCCTGTCAGATACACCTACCTAC...ATTCTCTTCCCCAGAAACACGCAGGCAGTTAAAGGTGGGAAACAAAGGAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR GCA 90 bp | GGAAGGGACTTAAGAGGGAAGATAATGAAGGTACGGGGTGGGAGAGAGATCTTGCCTTCAGGGTTCTTCTaGTCCGTCCCAGATGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRDLRGKIMKVRGGREILPSGFF*SVPDAC Trigger: GCAGGCATCTGGGACGGAGCAGAAGAACCCTGAAGG...CAAGATCTCTCTCCCACCCCGTACCTTCATTATCTTCCCTCTTAAGTCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR CCA 90 bp | CCCACTCCTTTGTTTCCCACCTTTAACTGCCTGCGTGTTTCTGGGGAAGAGAATTCCAGGTCGACAGAGTaGATGCTGGCAATAGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PTPLFPTFNCLRVSGEENSRSTE*MLAIGA Trigger: AGCGCCTATTGCCAGCATCCACTCTGTCGACCTGGA...ATTCTCTTCCCCAGAAACACGCAGGCAGTTAAAGGTGGGAAACAAAGGAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR CCA 90 bp | GGAAGGGACTTAAGAGGGAAGATAATGAAGGTACGGGGTGGGAGAGAGATCTTGTCCAGGTCGACAGAGTaGATGCTGGCAATAGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GRDLRGKIMKVRGGREILSRSTE*MLAIGA Trigger: AGCGCCTATTGCCAGCATCCACTCTGTCGACCTGGA...CAAGATCTCTCTCCCACCCCGTACCTTCATTATCTTCCCTCTTAAGTCCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR CCA 90 bp | CCCACTCCTTTGTTTCCCACCTTTAACTGCCTGCGTGTTTCTGGGGAAGAGAATCGACAGATCCAGTTCTaGGATGGGCATCCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PTPLFPTFNCLRVSGEENRQIQF*DGHPPE Trigger: TTCTGGAGGATGCCCATCCCAGAACTGGATCTGTCG...ATTCTCTTCCCCAGAAACACGCAGGCAGTTAAAGGTGGGAAACAAAGGAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR CCA 90 bp | GGAAGGGACTTAAGAGGGAAGATAATGAAGGTACGGGGTGGGAGAGAGATCTTGCGACAGATCCAGTTCTaGGATGGGCATCCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GRDLRGKIMKVRGGREILRQIQF*DGHPPE Trigger: TTCTGGAGGATGCCCATCCCAGAACTGGATCTGTCG...CAAGATCTCTCTCCCACCCCGTACCTTCATTATCTTCCCTCTTAAGTCCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR TCA 90 bp | GAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAAGATGTAGGTAGGTGTATCTaGCAGGCCCAGGCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ENKIKVEGLERKGLKREDVGRCI*QAQAFQ Trigger: CTGGAAGGCCTGGGCCTGTCAGATACACCTACCTAC...ATCTTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR TCA 90 bp | GAAGAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAAGTAGGTAGGTGTATCTaGCAGGCCCAGGCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EENKIKVEGLERKGLKREVGRCI*QAQAFQ Trigger: CTGGAAGGCCTGGGCCTGTCAGATACACCTACCTAC...TTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR GCA 90 bp | CTGCTTACTTCACGGTCTTATGGCGGCCAAAGAACTGTGTCAGGAATCACTGATTTTTGCCAACGCTGCTaGTATCCTTGCTCTCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LLTSRSYGGQRTVSGITDFCQRC*YPCSRR Trigger: CCTACGAGAGCAAGGATAGCAGCAGCGTTGGCAAAA...ATCAGTGATTCCTGACACAGTTCTTTGGCCGCCATAAGACCGTGAAGTAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR GCA 90 bp | GAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAAGATCCTTCAGGGTTCTTCTaGTCCGTCCCAGATGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ENKIKVEGLERKGLKREDPSGFF*SVPDAC Trigger: GCAGGCATCTGGGACGGAGCAGAAGAACCCTGAAGG...ATCTTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR CCA 90 bp | GGAAGGGACTTAAGAGGGAAGATAATGAAGGTACGGGGTGGGAGAGAGATCTTGGATCCAGTTCTGGGATaGGCATCCTCCAGAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GRDLRGKIMKVRGGREILDPVLG*ASSRKE Trigger: TTCTTTTCTGGAGGATGCCCATCCCAGAACTGGATC...CAAGATCTCTCTCCCACCCCGTACCTTCATTATCTTCCCTCTTAAGTCCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR GCA 90 bp | TGTGGTGCCTCAAATAAGGGTGATTCTTTTCTGGGATTAGTTAATATTCTCCGGCCTTCAGGGTTCTTCTaGTCCGTCCCAGATGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: CGASNKGDSFLGLVNILRPSGFF*SVPDAC Trigger: GCAGGCATCTGGGACGGAGCAGAAGAACCCTGAAGG...CCGGAGAATATTAACTAATCCCAGAAAAGAATCACCCTTATTTGAGGCACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR CCA 90 bp | GAAGAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAATCCAGGTCGACAGAGTaGATGCTGGCAATAGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: EENKIKVEGLERKGLKRESRSTE*MLAIGA Trigger: AGCGCCTATTGCCAGCATCCACTCTGTCGACCTGGA...TTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR TCA 90 bp | TATTTGCTTACTGGCCTGGTAGAGGACATTAGGGAGGCTCAAGTAATCTTTGAAGCGCTCTCCAGAAGTTaGAGGTGCTGTACTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: YLLTGLVEDIREAQVIFEALSRS*RCCTQG Trigger: TCCTTGAGTACAGCACCTTCAACTTCTGGAGAGCGC...TTCAAAGATTACTTGAGCCTCCCTAATGTCCTCTACCAGGCCAGTAAGCAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR TCA 90 bp | GAAGAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAAGCGCTCTCCAGAAGTTaGAGGTGCTGTACTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EENKIKVEGLERKGLKREALSRS*RCCTQG Trigger: TCCTTGAGTACAGCACCTTCAACTTCTGGAGAGCGC...TTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR GCA 90 bp | GAAGAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAACCTGCCCGTTCATTTTaGCAACGCTGCTGCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: EENKIKVEGLERKGLKREPARSF*QRCCYP Trigger: AGGATAGCAGCAGCGTTGGCAAAATGAACGGGCAGG...TTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR CCA 90 bp | GAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAAGATCGACAGATCCAGTTCTaGGATGGGCATCCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ENKIKVEGLERKGLKREDRQIQF*DGHPPE Trigger: TTCTGGAGGATGCCCATCCCAGAACTGGATCTGTCG...ATCTTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR GCA 90 bp | GAAGAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAATTTTGCCAACGCTGCTaGTATCCTTGCTCTCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EENKIKVEGLERKGLKREFCQRC*YPCSRR Trigger: CCTACGAGAGCAAGGATAGCAGCAGCGTTGGCAAAA...TTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR GCA 90 bp | GAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAAGATTTTTGCCAACGCTGCTaGTATCCTTGCTCTCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: ENKIKVEGLERKGLKREDFCQRC*YPCSRR Trigger: CCTACGAGAGCAAGGATAGCAGCAGCGTTGGCAAAA...ATCTTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR CCA 90 bp | GAAGAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAAGATCCAGTTCTGGGATaGGCATCCTCCAGAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: EENKIKVEGLERKGLKREDPVLG*ASSRKE Trigger: TTCTTTTCTGGAGGATGCCCATCCCAGAACTGGATC...TTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| 3UTR CAA 72 bp | AAACTTCCAGGTTCTCATTACTTCTTGAAGCAGTATTaGCTTACTGGCCTGGTAGAGGACATTAGGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KLPGSHYFLKQY*LTGLVEDIREA Trigger: AGCCTCCCTAATGTCCTCTACCAGGCCAGTAAGCAAATACTGCTTCAAGAAGTAATGAGAACCTGGAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR GCA 90 bp | AAATCCTGTTTTGTAGAAAGTGTCTCAAAACTTCCAGGTTCTCATTACTTCTTGCCTGCCCGTTCATTTTaGCAACGCTGCTGCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: KSCFVESVSKLPGSHYFLPARSF*QRCCYP Trigger: AGGATAGCAGCAGCGTTGGCAAAATGAACGGGCAGG...CAAGAAGTAATGAGAACCTGGAAGTTTTGAGACACTTTCTACAAAACAGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS GCA 90 bp | CTCAAGGAGGGGGTCACCTTCAGGGTTCTTCTGCTCCGTCCCAGATaGCTGCCCGTTCATTTTGCCAACGCTGCTGCTATCCTTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LKEGVTFRVLLLRPR*LPVHFANAAAILAL Trigger: GAGAGCAAGGATAGCAGCAGCGTTGGCAAAATGAACGGGCAGGCATCTGGGACGGAGCAGAAGAACCCTGAAGGTGACCCCCTCCTTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS GCA 90 bp | TTGAAGGTGCTGTACTCAAGGAGGGGGTCACCTTCAGGGTTCTTCTaGTCCGTCCCAGATGCCTGCCCGTTCATTTTGCCAACGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LKVLYSRRGSPSGFF*SVPDACPFILPTLL Trigger: CAGCAGCGTTGGCAAAATGAACGGGCAGGCATCTGGGACGGAGCAGAAGAACCCTGAAGGTGACCCCCTCCTTGAGTACAGCACCTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS TCA 90 bp | TTTGCCAACGCTGCTGCTATCCTTGCTCTCGTAGGTAGGTGTATCTaGCAGGCCCAGGCCTTCCAGCTCCGACAGATCCAGTTCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: FANAAAILALVGRCI*QAQAFQLRQIQFWD Trigger: ATCCCAGAACTGGATCTGTCGGAGCTGGAAGGCCTGGGCCTGTCAGATACACCTACCTACGAGAGCAAGGATAGCAGCAGCGTTGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS-3UTR CAA 90 bp | CATCCCACTCCTTTGTTTCCCACCTTTAACTGCCTGCGTGTTTCTGGGGAAGAGGCCTGCCCGTTCATTTaGCCAACGCTGCTGCTATCC | + |
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Preference number: 5 (lower is better) Translates to: HPTPLFPTFNCLRVSGEEACPFI*PTLLLS Trigger: GGATAGCAGCAGCGTTGGCAAAATGAACGGGCAGGC...CTCTTCCCCAGAAACACGCAGGCAGTTAAAGGTGGGAAACAAAGGAGTGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065482.6 |
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| CDS-3UTR CAA 90 bp | GAGAACAAGATTAAAGTGGAAGGCTTAGAGAGGAAGGGACTTAAGAGGGAAGATGCCTGCCCGTTCATTTaGCCAACGCTGCTGCTATCC | + |
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Preference number: 5 (lower is better) Translates to: ENKIKVEGLERKGLKREDACPFI*PTLLLS Trigger: GGATAGCAGCAGCGTTGGCAAAATGAACGGGCAGGC...ATCTTCCCTCTTAAGTCCCTTCCTCTCTAAGCCTTCCACTTTAATCTTGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS TCA 72 bp | GCTGCTGCTATCCTTGCTCTCGTAGGTAGGTGTATCTaGCAGGCCCAGGCCTTCCAGCTCCGACAGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: AAAILALVGRCI*QAQAFQLRQIQ Trigger: CTGGATCTGTCGGAGCTGGAAGGCCTGGGCCTGTCAGATACACCTACCTACGAGAGCAAGGATAGCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS GCA 72 bp | GGGGTCACCTTCAGGGTTCTTCTGCTCCGTCCCAGATaGCTGCCCGTTCATTTTGCCAACGCTGCTGCTATC | + |
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Preference number: 6 (lower is better) Translates to: GVTFRVLLLRPR*LPVHFANAAAI Trigger: GATAGCAGCAGCGTTGGCAAAATGAACGGGCAGGCATCTGGGACGGAGCAGAAGAACCCTGAAGGTGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS GCA 72 bp | CTGTACTCAAGGAGGGGGTCACCTTCAGGGTTCTTCTaGTCCGTCCCAGATGCCTGCCCGTTCATTTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LYSRRGSPSGFF*SVPDACPFILP Trigger: TGGCAAAATGAACGGGCAGGCATCTGGGACGGAGCAGAAGAACCCTGAAGGTGACCCCCTCCTTGAGTACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS CCA 72 bp | CAGGCCCAGGCCTTCCAGCTCCGACAGATCCAGTTCTaGGATGGGCATCCTCCAGAAAAGAAAGGAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QAQAFQLRQIQF*DGHPPEKKGAV Trigger: TACAGCTCCTTTCTTTTCTGGAGGATGCCCATCCCAGAACTGGATCTGTCGGAGCTGGAAGGCCTGGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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| CDS CAA 90 bp | TCCAGGTCGACAGAGTGGATGCTGGCAATAGGCGCTCTCCAGAAGTaGAAGGTGCTGTACTCAAGGAGGGGGTCACCTTCAGGGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRSTEWMLAIGALQK*KVLYSRRGSPSGFF Trigger: GAAGAACCCTGAAGGTGACCCCCTCCTTGAGTACAGCACCTTCAACTTCTGGAGAGCGCCTATTGCCAGCATCCACTCTGTCGACCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065482.6 ENSMUST00000196025.5 ENSMUST00000198948.5 |
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