Pregenerated sensors for MLKL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012519Ensembl transcript IDs: ENSMUST00000056157.14, ENSMUST00000120432.3, ENSMUST00000145862.3
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTTCAGGGGCTACATGGTaGGATCCCATCTCAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: PAFRRQNWKISLSLSQPVSGATW*DPISSK Trigger: TTTACTTGAGATGGGATCTCACCATGTAGCCCCTGA...AACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| 3UTR CAA 90 bp | ATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTaGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACAT | + |
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Preference number: 2 (lower is better) Translates to: MPLIPAFRRQNWKIS*SLSQPVLHSFQGLH Trigger: ATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGTCAGGGGCTACATGGTaGGATCCCATCTCAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: AFNSSIQEAELEDFLEFESGATW*DPISSK Trigger: TTTACTTGAGATGGGATCTCACCATGTAGCCCCTGA...CTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| 3UTR CAA 90 bp | GCAAGCAAGCAAGGGAGAAAGAAGCTATTTGCTCCCAGCAATAAGTaGATGCTGCTAACAGATATGAAGGACAAATGTCCACTTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ASKQGRKKLFAPSNK*MLLTDMKDKCPLCP Trigger: AGGACAAAGTGGACATTTGTCCTTCATATCTGTTAGCAGCATCAACTTATTGCTGGGAGCAAATAGCTTCTTTCTCCCTTGCTTGCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| 3UTR-3UTR CAA 90 bp | AGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTGCTCCCAGCAATAAGTaGATGCTGCTAACAGATATG | + |
|
Preference number: 3 (lower is better) Translates to: SIQEAELEDFLEFEPACSAPSNK*MLLTDM Trigger: CATATCTGTTAGCAGCATCAACTTATTGCTGGGAGC...AGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGTCCACAGAGGGCCGTTaGGAGGGCTCATGGGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSQPVLHSFQGLHGESTEGR*EGSWAR Trigger: TCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGA...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGGGCTGTAGCAGGCCGTaGACACGGTTTCCTAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSQPVLHSFQGLHGEGCSRP*TRFPRR Trigger: GCGTCTAGGAAACCGTGTGCACGGCCTGCTACAGCC...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACGGCTGTAGCAGGCCGTaGACACGGTTTCCTAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: FRRQNWKISLSLSQPVLHGCSRP*TRFPRR Trigger: GCGTCTAGGAAACCGTGTGCACGGCCTGCTACAGCC...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGTCCACAGAGGGCCGTTaGGAGGGCTCATGGGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPAFRRQNWKISLSLSQSTEGR*EGSWAR Trigger: TCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGA...CTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACAACTCAGGGCAATCCTaGCCCACTGGTTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRRQNWKISLSLSQPVLHNSGQS*PTGSCF Trigger: GAAGCAGGAACCAGTGGGTCAGGATTGCCCTGAGTT...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | GCAAGCAAGCAAGGGAGAAAGAAGCTATTTGCTCCCAGCAATAAGTTGATGCTGTGTCGATCTTCCTGCTaGCAGGATGCTGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASKQGRKKLFAPSNKLMLCRSSC*QDAGWL Trigger: CAGCCAGCCAGCATCCTGGCAGCAGGAAGATCGACA...CAGCATCAACTTATTGCTGGGAGCAAATAGCTTCTTTCTCCCTTGCTTGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | GCAAGCAAGCAAGGGAGAAAGAAGCTATTTGCTCCCAGCAATAAGTTGATGCTGTCCTGTCGATCTTCCTaGTGCCAGGATGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASKQGRKKLFAPSNKLMLSCRSS*CQDAGW Trigger: CCAGCCAGCATCCTGGCAGCAGGAAGATCGACAGGA...CAGCATCAACTTATTGCTGGGAGCAAATAGCTTCTTTCTCCCTTGCTTGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | CCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTGCAATCCTGACCCACTaGTTCCTGCTTCTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAFRRQNWKISLSLSQPVAILTH*FLLLVL Trigger: GAGGACAAGAAGCAGGAACCAGTGGGTCAGGATTGC...AACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGGTTCACAGTACTCCATaGCAATGGAGAACTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSQPVLHSFQGLHGEVHSTP*QWRTQG Trigger: CCCCTGAGTTCTCCATTGTCATGGAGTACTGTGAAC...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | CCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCTGTCGATCTTCCTGCTaGCAGGATGCTGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLIPAFRRQNWKISLSLSCRSSC*QDAGWL Trigger: CAGCCAGCCAGCATCCTGGCAGCAGGAAGATCGACA...GCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | TGGTCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGTCCTGTCGATCTTCCTaGTGCCAGGATGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSMPLIPAFRRQNWKISLSCRSS*CQDAGW Trigger: CCAGCCAGCATCCTGGCAGCAGGAAGATCGACAGGA...CAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACCGTTGGGAGGGCTCATaGGCACGACACTCATTAATG | + |
|
Preference number: 4 (lower is better) Translates to: FRRQNWKISLSLSQPVLHRWEGS*ARHSLM Trigger: CATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACG...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACGTTCACAGTACTCCATaGCAATGGAGAACTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRRQNWKISLSLSQPVLHVHSTP*QWRTQG Trigger: CCCCTGAGTTCTCCATTGTCATGGAGTACTGTGAAC...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGAACTCAGGGCAATCCTaGCCCACTGGTTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFNSSIQEAELEDFLEFENSGQS*PTGSCF Trigger: GAAGCAGGAACCAGTGGGTCAGGATTGCCCTGAGTT...CTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACAGGTTCTTCTTTCCTTaGGCCTGGAGTCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRRQNWKISLSLSQPVLHRFFFP*AWSLWR Trigger: TCTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCT...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGGCCTGTATAAGCCTCTaGCTGCCCTCAGGACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPAFRRQNWKISLSLSQACISL*LPSGLG Trigger: TCCTAGTCCTGAGGGCAGCCAGAGGCTTATACAGGC...CTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| 3UTR CAA 72 bp | GCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTaGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AFRRQNWKISLS*SQPVLHSFQGL Trigger: TAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | CCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCCTTTGGAATCTCCTTaGTTTGGAGATCTTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PAFRRQNWKISLSLSQPVPLESP*FGDLVG Trigger: TCCCACAAGATCTCCAAATCAAGGAGATTCCAAAGG...AACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | GCAAGCAAGCAAGGGAGAAAGAAGCTATTTGCTCCCAGCAATAAGTTGATGCTGAGGTTCTTCTTTCCTTaGGCCTGGAGTCTCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ASKQGRKKLFAPSNKLMLRFFFP*AWSLWR Trigger: TCTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCT...CAGCATCAACTTATTGCTGGGAGCAAATAGCTTCTTTCTCCCTTGCTTGCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTGCCTGTATAAGCCTCTaGCTGCCCTCAGGACTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SMPLIPAFRRQNWKISLSACISL*LPSGLG Trigger: TCCTAGTCCTGAGGGCAGCCAGAGGCTTATACAGGC...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | AGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTCTGAACTTTTCTATCTaGTGGTTAGCCTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SIQEAELEDFLEFEPACSLNFSI*WLASFR Trigger: CCTGAAGGAGGCTAACCAGCAGATAGAAAAGTTCAG...AGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGAACTTTTCTATCTGCTaGTTAGCCTCCTTCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: SLSLSQPVLHSFQGLHGENFSIC*LASFRT Trigger: AGTCCTGAAGGAGGCTAACCAGCAGATAGAAAAGTT...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACCTGCTGATGTTTCTGTaGAGTGTTTCCGAATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRRQNWKISLSLSQPVLHLLMFL*SVSEWC Trigger: ACACCATTCGGAAACACTCCACAGAAACATCAGCAG...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTGCAATCCTGACCCACTaGTTCCTGCTTCTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMPLIPAFRRQNWKISLSAILTH*FLLLVL Trigger: GAGGACAAGAAGCAGGAACCAGTGGGTCAGGATTGC...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGGGAAACTGGAGCTGCTaGTGTTTCTGTGGAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AFNSSIQEAELEDFLEFEGNWSC*CFCGVF Trigger: AAACACTCCACAGAAACATCAGCAGCTCCAGTTTCC...CTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | TGGTCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGGGAAACTGGAGCTGCTaGTGTTTCTGTGGAGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: WSMPLIPAFRRQNWKISLGNWSC*CFCGVF Trigger: AAACACTCCACAGAAACATCAGCAGCTCCAGTTTCC...CAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | AGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTAGAGGATCTTATCATTaGCCACACTCACAAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIQEAELEDFLEFEPACSRGSYH*PHSQTS Trigger: GGAAGTTTGTGAGTGTGGGCAATGATAAGATCCTCT...AGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | TGGTCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGATTTCCGTCTTCCTCTaGATCCTGTCGATCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WSMPLIPAFRRQNWKISLISVFL*ILSIFL Trigger: CAGGAAGATCGACAGGATGCAGAGGAAGACGGAAAT...CAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | GCAAGCAAGCAAGGGAGAAAGAAGCTATTTGCTCCCAGCAATAAGTTGATGCTGTATGGGACTTCTTGCTaGACTTTTCTATCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ASKQGRKKLFAPSNKLMLYGTSC*TFLSAG Trigger: ACCAGCAGATAGAAAAGTTCAGCAAGAAGTCCCATA...CAGCATCAACTTATTGCTGGGAGCAAATAGCTTCTTTCTCCCTTGCTTGCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | TTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGTGCGCACACTCATTGTaGGGTCTTTTTCTCTATCCA | + |
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Preference number: 4 (lower is better) Translates to: LIPAFRRQNWKISLSLSQCAHSL*GLFLYP Trigger: TGGATAGAGAAAAAGACCTCACAATGAGTGTGCGCA...CTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | GCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCTGAACTTTTCTATCTaGTGGTTAGCCTCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFNSSIQEAELEDFLEFELNFSI*WLASFR Trigger: CCTGAAGGAGGCTAACCAGCAGATAGAAAAGTTCAG...CTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR GCA 90 bp | ATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGATTTCCGTCTTCCTCTaGATCCTGTCGATCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: MPLIPAFRRQNWKISLSLISVFL*ILSIFL Trigger: CAGGAAGATCGACAGGATGCAGAGGAAGACGGAAAT...CAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCTGCTGATGTTTCTGTaGAGTGTTTCCGAATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LIPAFRRQNWKISLSLSQLLMFL*SVSEWC Trigger: ACACCATTCGGAAACACTCCACAGAAACATCAGCAG...CTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCTATGGGACTTCTTGCTaGACTTTTCTATCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PLIPAFRRQNWKISLSLSYGTSC*TFLSAG Trigger: ACCAGCAGATAGAAAAGTTCAGCAAGAAGTCCCATA...GCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | ATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGCCTTTGGAATCTCCTTaGTTTGGAGATCTTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MPLIPAFRRQNWKISLSLPLESP*FGDLVG Trigger: TCCCACAAGATCTCCAAATCAAGGAGATTCCAAAGG...CAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | ATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGGGGGGCTTCACTGTTTaGTCAATGCAAATCCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MPLIPAFRRQNWKISLSLGGFTV*SMQIPN Trigger: ATTTGGGATTTGCATTGATCAAACAGTGAAGCCCCC...CAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR TCA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTGCGCACACTCATTGTaGGGTCTTTTTCTCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMPLIPAFRRQNWKISLSCAHSL*GLFLYP Trigger: TGGATAGAGAAAAAGACCTCACAATGAGTGTGCGCA...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTGGAATCTCCTTGATTTaGAGATCTTGTGGGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: SMPLIPAFRRQNWKISLSGISLI*RSCGIS Trigger: GGAGATCCCACAAGATCTCCAAATCAAGGAGATTCC...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS-3UTR CCA 90 bp | ATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGGGAATCTCCTTGATTTaGAGATCTTGTGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPLIPAFRRQNWKISLSLGISLI*RSCGIS Trigger: GGAGATCCCACAAGATCTCCAAATCAAGGAGATTCC...CAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGATATACGCAAGATGTTaGGAGAATCGAATTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSQPVLHSFQGLHGEIYARC*ENRISS Trigger: TGAAGAAATTCGATTCTCCCAACATCTTGCGTATAT...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CCA 90 bp | TGGTCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGATCACAGCCTTCAAATaGGATCTTTCCAGTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WSMPLIPAFRRQNWKISLITAFK*DLSSGN Trigger: ATTGCCACTGGAAAGATCCCATTTGAAGGCTGTGAT...CAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACCTCCTCTATAAATGGTaGTCATTTTACTTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRRQNWKISLSLSQPVLHLLYKW*SFYLSS Trigger: TGAAGACAAGTAAAATGAGCACCATTTATAGAGGAG...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR GCA 90 bp | AGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTTCACTGTTTGATCAATaGAAATCCCAAATATACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIQEAELEDFLEFEPACSSLFDQ*KSQIYA Trigger: TGCGTATATTTGGGATTTGCATTGATCAAACAGTGA...AGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CCA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTAACTTTTCTATCTGCTaGTTAGCCTCCTTCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SMPLIPAFRRQNWKISLSNFSIC*LASFRT Trigger: AGTCCTGAAGGAGGCTAACCAGCAGATAGAAAAGTT...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACATATACGCAAGATGTTaGGAGAATCGAATTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRRQNWKISLSLSQPVLHIYARC*ENRISS Trigger: TGAAGAAATTCGATTCTCCCAACATCTTGCGTATAT...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CCA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTATCACAGCCTTCAAATaGGATCTTTCCAGTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SMPLIPAFRRQNWKISLSITAFK*DLSSGN Trigger: ATTGCCACTGGAAAGATCCCATTTGAAGGCTGTGAT...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR GCA 90 bp | TGGTCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGGGTTTTAGTGAGCATTaGTTCAGGGTTTTGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WSMPLIPAFRRQNWKISLGFSEH*FRVLLI Trigger: AATCAACAAAACCCTGAAGCAATGCTCACTAAAACC...CAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR GCA 90 bp | GCAAGCAAGCAAGGGAGAAAGAAGCTATTTGCTCCCAGCAATAAGTTGATGCTGTCACTGTTTGATCAATaGAAATCCCAAATATACGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASKQGRKKLFAPSNKLMLSLFDQ*KSQIYA Trigger: TGCGTATATTTGGGATTTGCATTGATCAAACAGTGA...CAGCATCAACTTATTGCTGGGAGCAAATAGCTTCTTTCTCCCTTGCTTGCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CCA 90 bp | GCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGGTCATAAAGGCAAAATaGATTTTTCAGTCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFNSSIQEAELEDFLEFEVIKAK*IFQSLR Trigger: CCTGAGAGACTGAAAAATCCATTTTGCCTTTATGAC...CTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR GCA 90 bp | TTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCTCCTCTATAAATGGTaGTCATTTTACTTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPAFRRQNWKISLSLSQLLYKW*SFYLSS Trigger: TGAAGACAAGTAAAATGAGCACCATTTATAGAGGAG...CTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR GCA 90 bp | GCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGTGGAATTCTGTGTTTTaGTTAACTCAAATCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AFNSSIQEAELEDFLEFEWNSVF*LTQILQ Trigger: TTGCAGGATTTGAGTTAAGCAAAACACAGAATTCCA...CTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CCA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTGTCATAAAGGCAAAATaGATTTTTCAGTCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMPLIPAFRRQNWKISLSVIKAK*IFQSLR Trigger: CCTGAGAGACTGAAAAATCCATTTTGCCTTTATGAC...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGTGGAATTCTGTGTTTTaGTTAACTCAAATCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MPLIPAFRRQNWKISLSLWNSVF*LTQILQ Trigger: TTGCAGGATTTGAGTTAAGCAAAACACAGAATTCCA...CAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CCA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTACAAACTTCCAAATATaGGACTTCTTGCTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SMPLIPAFRRQNWKISLSTNFQI*DFLLNF Trigger: AAAGTTCAGCAAGAAGTCCCATATTTGGAAGTTTGT...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CCA 90 bp | CGGCCCAGGGCAGCAGTAATGTCATCGGGCAGGTTCTTCTTTCCTTaGGCCTGGAGTCTCTGGAGAGGCTGTAGCAGGCCGTGCACACGG | + |
|
Preference number: 5 (lower is better) Translates to: RPRAAVMSSGRFFFP*AWSLWRGCSRPCTR Trigger: CCGTGTGCACGGCCTGCTACAGCCTCTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCTGCCCGATGACATTACTGCTGCCCTGGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 90 bp | GTAATGTCATCGGGCAGGTTCTTCTTTCCTTGGGCCTGGAGTCTCTaGAGAGGCTGTAGCAGGCCGTGCACACGGTTTCCTAGACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VMSSGRFFFPWAWSL*RGCSRPCTRFPRRW Trigger: CCAGCGTCTAGGAAACCGTGTGCACGGCCTGCTACAGCCTCTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCTGCCCGATGACATTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 90 bp | AGGGCAGCAGTAATGTCATCGGGCAGGTTCTTCTTTCCTTGGGCCTaGAGTCTCTGGAGAGGCTGTAGCAGGCCGTGCACACGGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RAAVMSSGRFFFPWA*SLWRGCSRPCTRFP Trigger: AGGAAACCGTGTGCACGGCCTGCTACAGCCTCTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCTGCCCGATGACATTACTGCTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTGTCCACAGAGGGCCGTaGGGAGGGCTCATGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PAFRRQNWKISLSLSQPVVHRGP*GGLMGT Trigger: CGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGAC...AACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS GCA 90 bp | CCGTGGATTCTTCAACCGCAGACAGTCTCTCCAAGATTCGTTCTCTaGCAGAAAGACTCCTACCGTCCACAGAGGGCCGTTGGGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWILQPQTVSPRFVL*QKDSYRPQRAVGRA Trigger: AGCCCTCCCAACGGCCCTCTGTGGACGGTAGGAGTCTTTCTGGCAGAGAACGAATCTTGGAGAGACTGTCTGCGGTTGAAGAATCCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056157.14 |
||
| CDS TCA 90 bp | GCACGACACTCATTAATGATTTCCCGCAACAACTCAGGGCAATCCTaGCCCACTGGTTCCTGCTTCTTGTCCTCAGCCACCAGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARHSLMISRNNSGQS*PTGSCFLSSATSSR Trigger: CCGGGAGCTGGTGGCTGAGGACAAGAAGCAGGAACCAGTGGGTCAGGATTGCCCTGAGTTGTTGCGGGAAATCATTAATGAGTGTCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS GCA 90 bp | TTCTTTCCTTGGGCCTGGAGTCTCTGGAGAGGCTGTAGCAGGCCGTaGACACGGTTTCCTAGACGCTGGCATTGTTTCCGGCAGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFPWAWSLWRGCSRP*TRFPRRWHCFRQYF Trigger: GAAATACTGCCGGAAACAATGCCAGCGTCTAGGAAACCGTGTGCACGGCCTGCTACAGCCTCTCCAGAGACTCCAGGCCCAAGGAAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 90 bp | CCAGAAAGACTCCTACCGTCCACAGAGGGCCGTTGGGAGGGCTCATaGGCACGACACTCATTAATGATTTCCCGCAACAACTCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PERLLPSTEGRWEGS*ARHSLMISRNNSGQ Trigger: TTGCCCTGAGTTGTTGCGGGAAATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGTAGGAGTCTTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056157.14 |
||
| CDS CCA 90 bp | TCAACCGCAGACAGTCTCTCCAAGATTCCGTCCACAGAGGGCCGTTaGGAGGGCTCATGGGCACGACACTCATTAATGATTTCCCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: STADSLSKIPSTEGR*EGSWARHSLMISRN Trigger: GTTGCGGGAAATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGAATCTTGGAGAGACTGTCTGCGGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120432.3 |
||
| CDS TCA 90 bp | AGCCTCTGGCTGCCCTCAGGACTAGGAGGCTGCGCACACTCATTGTaGGGTCTTTTTCTCTATCCAGCAGTTCCCTCAGGGTTCCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLWLPSGLGGCAHSL*GLFLYPAVPSGFQV Trigger: AACTTGGAACCCTGAGGGAACTGCTGGATAGAGAAAAAGACCTCACAATGAGTGTGCGCAGCCTCCTAGTCCTGAGGGCAGCCAGAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CCA 90 bp | ATTCGTTCTCTGCCAGAAAGACTCCTACCGTCCACAGAGGGCCGTTaGGAGGGCTCATGGGCACGACACTCATTAATGATTTCCCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IRSLPERLLPSTEGR*EGSWARHSLMISRN Trigger: GTTGCGGGAAATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGTAGGAGTCTTTCTGGCAGAGAACGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056157.14 |
||
| CDS CCA 90 bp | AGTCTCTCCAAGATTCCGTCCACAGAGGGCCGTTGGGAGGGCTCATaGGCACGACACTCATTAATGATTTCCCGCAACAACTCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLSKIPSTEGRWEGS*ARHSLMISRNNSGQ Trigger: TTGCCCTGAGTTGTTGCGGGAAATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGAATCTTGGAGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120432.3 |
||
| CDS CCA 90 bp | ACGAGGAAACTGGAGCTGCTGATGTTTCTGTGGAGTGTTTCCGAATaGTGTAGCCTGTATAAGCCTCTGGCTGCCCTCAGGACTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TRKLELLMFLWSVSE*CSLYKPLAALRTRR Trigger: CCTCCTAGTCCTGAGGGCAGCCAGAGGCTTATACAGGCTACACCATTCGGAAACACTCCACAGAAACATCAGCAGCTCCAGTTTCCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGACTGGTTCCTGCTTCTaGTCCTCAGCCACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSQPVLHSFQGLHGETGSCF*SSATSS Trigger: GGAGCTGGTGGCTGAGGACAAGAAGCAGGAACCAGT...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTGTCCACAGAGGGCCGTaGGGAGGGCTCATGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SMPLIPAFRRQNWKISLSVHRGP*GGLMGT Trigger: CGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGAC...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS TCA 90 bp | CCTCTGCATCCTGTCGATCTTCCTGCTGCCAGGATGCTGGCTGGCTaGCATCTGAAACGGTATTCCAATGATAAACCTGAAGCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLHPVDLPAARMLAG*HLKRYSNDKPEAAA Trigger: TGCTGCTGCTTCAGGTTTATCATTGGAATACCGTTTCAGATGTCAGCCAGCCAGCATCCTGGCAGCAGGAAGATCGACAGGATGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 90 bp | CTCATTAATGATTTCCCGCAACAACTCAGGGCAATCCTGACCCACTaGTTCCTGCTTCTTGTCCTCAGCCACCAGCTCCCGGATCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LINDFPQQLRAILTH*FLLLVLSHQLPDLL Trigger: AAGAAGATCCGGGAGCTGGTGGCTGAGGACAAGAAGCAGGAACCAGTGGGTCAGGATTGCCCTGAGTTGTTGCGGGAAATCATTAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGCAGGTTCTTCTTTCCTaGGGCCTGGAGTCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSQPVLHSFQGLHGEQVLLS*GLESLE Trigger: CTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCTG...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS TCA 90 bp | ATCCTGTCGATCTTCCTGCTGCCAGGATGCTGGCTGGCTGACATCTaGAACGGTATTCCAATGATAAACCTGAAGCAGCAGCAACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILSIFLLPGCWLADI*NGIPMINLKQQQQL Trigger: GAGCTGTTGCTGCTGCTTCAGGTTTATCATTGGAATACCGTTTCAGATGTCAGCCAGCCAGCATCCTGGCAGCAGGAAGATCGACAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS TCA 90 bp | CAAGCTTTACTTGGTAGCCTCCGGCTACGAGGAAACTGGAGCTGCTaGTGTTTCTGTGGAGTGTTTCCGAATGGTGTAGCCTGTATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QALLGSLRLRGNWSC*CFCGVFPNGVACIS Trigger: GCTTATACAGGCTACACCATTCGGAAACACTCCACAGAAACATCAGCAGCTCCAGTTTCCTCGTAGCCGGAGGCTACCAAGTAAAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTTGATTTGGAGATCTaGTGGGATCTCCTGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAFRRQNWKISLSLSQPVLDLEI*WDLLCG Trigger: CCCACACAGGAGATCCCACAAGATCTCCAAATCAAG...AACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TGGTCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGACTGGTTCCTGCTTCTaGTCCTCAGCCACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WSMPLIPAFRRQNWKISLTGSCF*SSATSS Trigger: GGAGCTGGTGGCTGAGGACAAGAAGCAGGAACCAGT...CAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS GCA 90 bp | CAACTGCATCAGGATAACTTTCATATTTTCATTTCCGTCTTCCTCTaGATCCTGTCGATCTTCCTGCTGCCAGGATGCTGGCTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QLHQDNFHIFISVFL*ILSIFLLPGCWLAD Trigger: GTCAGCCAGCCAGCATCCTGGCAGCAGGAAGATCGACAGGATGCAGAGGAAGACGGAAATGAAAATATGAAAGTTATCCTGATGCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS-3UTR CAA 90 bp | GCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCAGGTTCTTCTTTCCTaGGGCCTGGAGTCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AFNSSIQEAELEDFLEFEQVLLS*GLESLE Trigger: CTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCTG...CTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS TCA 90 bp | TCAGTTTGGTCCACGGAGGTCCAAGATGTTCCTTTGGAATCTCCTTaGTTTGGAGATCTTGTGGGATCTCCTGTGTGGGTTTTAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVWSTEVQDVPLESP*FGDLVGSPVWVLVS Trigger: GCTCACTAAAACCCACACAGGAGATCCCACAAGATCTCCAAATCAAGGAGATTCCAAAGGAACATCTTGGACCTCCGTGGACCAAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS GCA 90 bp | TTCATATTTTCATTTCCGTCTTCCTCTGCATCCTGTCGATCTTCCTaGTGCCAGGATGCTGGCTGGCTGACATCTGAAACGGTATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FIFSFPSSSASCRSS*CQDAGWLTSETVFQ Trigger: TTGGAATACCGTTTCAGATGTCAGCCAGCCAGCATCCTGGCAGCAGGAAGATCGACAGGATGCAGAGGAAGACGGAAATGAAAATATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGGGGAGACATATATCGTaGAACTGGATCTCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSQPVLHSFQGLHGEGRHIS*NWISLL Trigger: AAGCAGAGAGATCCAGTTCAACGATATATGTCTCCC...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS GCA 90 bp | CTCACAAACTTCCAAATATGGGACTTCTTGCTGAACTTTTCTATCTaGTGGTTAGCCTCCTTCAGGACTTCATCAAAACGGCCCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTNFQIWDFLLNFSI*WLASFRTSSKRPRA Trigger: TGCCCTGGGCCGTTTTGATGAAGTCCTGAAGGAGGCTAACCAGCAGATAGAAAAGTTCAGCAAGAAGTCCCATATTTGGAAGTTTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 90 bp | ACAAACTTCCAAATATGGGACTTCTTGCTGAACTTTTCTATCTGCTaGTTAGCCTCCTTCAGGACTTCATCAAAACGGCCCAGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TNFQIWDFLLNFSIC*LASFRTSSKRPRAA Trigger: TGCTGCCCTGGGCCGTTTTGATGAAGTCCTGAAGGAGGCTAACCAGCAGATAGAAAAGTTCAGCAAGAAGTCCCATATTTGGAAGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS-3UTR CAA 90 bp | GCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCTTGATTTGGAGATCTaGTGGGATCTCCTGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AFNSSIQEAELEDFLEFELDLEI*WDLLCG Trigger: CCCACACAGGAGATCCCACAAGATCTCCAAATCAAG...CTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | AGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTTGGAATCTCCTTGATTaGGAGATCTTGTGGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SIQEAELEDFLEFEPACSWNLLD*EILWDL Trigger: GAGATCCCACAAGATCTCCAAATCAAGGAGATTCCA...AGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACTGGAATCTCCTTGATTaGGAGATCTTGTGGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FRRQNWKISLSLSQPVLHWNLLD*EILWDL Trigger: GAGATCCCACAAGATCTCCAAATCAAGGAGATTCCA...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | AGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTTGGTGCTCATTTTACTaGTCTTCAGTTTGGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SIQEAELEDFLEFEPACSWCSFY*SSVWST Trigger: CGTGGACCAAACTGAAGACAAGTAAAATGAGCACCA...AGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAGTTTGAGCCAGCCTGTTCTACACAGTTTTCAGGGGCTACATGGTGAGGGGTTGTTGAATACTTaGATGGTAACTGGAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSQPVLHSFQGLHGEGLLNT*MVTGDL Trigger: CAGATCTCCAGTTACCATCAAAGTATTCAACAACCC...CTCACCATGTAGCCCCTGAAAACTGTGTAGAACAGGCTGGCTCAAACTCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTCTACACAGGGGGCTTCACTGTTaGATCAATGCAAATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FRRQNWKISLSLSQPVLHRGLHC*INANPK Trigger: TTTGGGATTTGCATTGATCAAACAGTGAAGCCCCCT...GTGTAGAACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CCA 90 bp | AGCAACAGCTCCTCCCAGACGTCTCTCAGCTTCTCATTCACTTCATaGAAGAGGATCTTATCATTGCCCACACTCACAAACTTCCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: SNSSSQTSLSFSFTS*KRILSLPTLTNFQI Trigger: TATTTGGAAGTTTGTGAGTGTGGGCAATGATAAGATCCTCTTCCATGAAGTGAATGAGAAGCTGAGAGACGTCTGGGAGGAGCTGTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCCTGTTAATATACGCAAGATGTaGGGAGAATCGAATTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAFRRQNWKISLSLSQPVNIRKM*GESNFF Trigger: GAAGAAATTCGATTCTCCCAACATCTTGCGTATATT...AACAGGCTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCAGGGGGCTTCACTGTTaGATCAATGCAAATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLIPAFRRQNWKISLSLSRGLHC*INANPK Trigger: TTTGGGATTTGCATTGATCAAACAGTGAAGCCCCCT...GCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGCATTGCTTCAGGGTTTaGTTGATTTCTTCCACGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LIPAFRRQNWKISLSLSQHCFRV*LISSTL Trigger: TAGCGTGGAAGAAATCAACAAAACCCTGAAGCAATG...CTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGTGGTGCTCATTTTACTaGTCTTCAGTTTGGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: MPLIPAFRRQNWKISLSLWCSFY*SSVWST Trigger: CGTGGACCAAACTGAAGACAAGTAAAATGAGCACCA...CAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCGGGTTGTTGAATACTTaGATGGTAACTGGAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLIPAFRRQNWKISLSLSGLLNT*MVTGDL Trigger: CAGATCTCCAGTTACCATCAAAGTATTCAACAACCC...GCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTGGGAGACATATATCGTaGAACTGGATCTCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SMPLIPAFRRQNWKISLSGRHIS*NWISLL Trigger: AAGCAGAGAGATCCAGTTCAACGATATATGTCTCCC...ACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CCA 90 bp | TCCAACACTTTCGGCCTGGGGGTTGTTGAATACTTTGATGGTAACTaGAGATCTGTGATACTCTCCTCTATAAATGGTGCTCATTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SNTFGLGVVEYFDGN*RSVILSSINGAHFT Trigger: AGTAAAATGAGCACCATTTATAGAGGAGAGTATCACAGATCTCCAGTTACCATCAAAGTATTCAACAACCCCCAGGCCGAAAGTGTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TGGTCTATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGCAAATATGGGACTTCTaGCTGAACTTTTCTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WSMPLIPAFRRQNWKISLQIWDF*LNFSIC Trigger: GCAGATAGAAAAGTTCAGCAAGAAGTCCCATATTTG...CAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCATAGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | GCAAGCAAGCAAGGGAGAAAGAAGCTATTTGCTCCCAGCAATAAGTTGATGCTGGTTTTGATCTCGTCATaGAAAGTGAACCTCACTATT | + |
|
Preference number: 5 (lower is better) Translates to: ASKQGRKKLFAPSNKLMLVLISS*KVNLTI Trigger: AATAGTGAGGTTCACTTTCAATGACGAGATCAAAAC...CAGCATCAACTTATTGCTGGGAGCAAATAGCTTCTTTCTCCCTTGCTTGCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGCAAATATGGGACTTCTaGCTGAACTTTTCTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MPLIPAFRRQNWKISLSLQIWDF*LNFSIC Trigger: GCAGATAGAAAAGTTCAGCAAGAAGTCCCATATTTG...CAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAAAGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGGTTTTGATCTCGTCATaGAAAGTGAACCTCACTATT | + |
|
Preference number: 5 (lower is better) Translates to: LIPAFRRQNWKISLSLSQVLISS*KVNLTI Trigger: AATAGTGAGGTTCACTTTCAATGACGAGATCAAAAC...CTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS-3UTR CAA 90 bp | TTAATTCCAGCATTCAGGAGGCAGAACTGGAAGATTTCCTTGAGTTTGAGCCAGAATATACGCAAGATGTaGGGAGAATCGAATTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LIPAFRRQNWKISLSLSQNIRKM*GESNFF Trigger: GAAGAAATTCGATTCTCCCAACATCTTGCGTATATT...CTGGCTCAAACTCAAGGAAATCTTCCAGTTCTGCCTCCTGAATGCTGGAATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS GCA 90 bp | AGTGAGCATTGCTTCAGGGTTTTGTTGATTTCTTCCACGCTAATTTaGAACTGCATCAGGATAACTTTCATATTTTCATTTCCGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SEHCFRVLLISSTLI*NCIRITFIFSFPSS Trigger: GGAAGACGGAAATGAAAATATGAAAGTTATCCTGATGCAGTTGCAAATTAGCGTGGAAGAAATCAACAAAACCCTGAAGCAATGCTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CCA 72 bp | TCGGGCAGGTTCTTCTTTCCTTGGGCCTGGAGTCTCTaGAGAGGCTGTAGCAGGCCGTGCACACGGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGRFFFPWAWSL*RGCSRPCTRFP Trigger: AGGAAACCGTGTGCACGGCCTGCTACAGCCTCTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCTGCCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 72 bp | GTAATGTCATCGGGCAGGTTCTTCTTTCCTTGGGCCTaGAGTCTCTGGAGAGGCTGTAGCAGGCCGTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: VMSSGRFFFPWA*SLWRGCSRPCT Trigger: TGTGCACGGCCTGCTACAGCCTCTCCAGAGACTCCAGGCCCAAGGAAAGAAGAACCTGCCCGATGACATTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 72 bp | GGAGTGTTTCCGAATGGTGTAGCCTGTATAAGCCTCTaGCTGCCCTCAGGACTAGGAGGCTGCGCACACTCA | + |
|
Preference number: 6 (lower is better) Translates to: GVFPNGVACISL*LPSGLGGCAHS Trigger: TGAGTGTGCGCAGCCTCCTAGTCCTGAGGGCAGCCAGAGGCTTATACAGGCTACACCATTCGGAAACACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CCA 72 bp | CTGCCAGAAAGACTCCTACCGTCCACAGAGGGCCGTTaGGAGGGCTCATGGGCACGACACTCATTAATGATT | + |
|
Preference number: 6 (lower is better) Translates to: LPERLLPSTEGR*EGSWARHSLMI Trigger: AATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGTAGGAGTCTTTCTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056157.14 |
||
| CDS CAA 72 bp | TCTGCCAGAAAGACTCCTACCGTCCACAGAGGGCCGTaGGGAGGGCTCATGGGCACGACACTCATTAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SARKTPTVHRGP*GGLMGTTLIND Trigger: ATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGTAGGAGTCTTTCTGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056157.14 |
||
| CDS CAA 90 bp | GATTCGTTCTCTGCCAGAAAGACTCCTACCGTCCACAGAGGGCCGTaGGGAGGGCTCATGGGCACGACACTCATTAATGATTTCCCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DSFSARKTPTVHRGP*GGLMGTTLINDFPQ Trigger: TTGCGGGAAATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGTAGGAGTCTTTCTGGCAGAGAACGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056157.14 |
||
| CDS CAA 90 bp | TTCAACCGCAGACAGTCTCTCCAAGATTCCGTCCACAGAGGGCCGTaGGGAGGGCTCATGGGCACGACACTCATTAATGATTTCCCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FNRRQSLQDSVHRGP*GGLMGTTLINDFPQ Trigger: TTGCGGGAAATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGAATCTTGGAGAGACTGTCTGCGGTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120432.3 |
||
| CDS TCA 72 bp | CTTGGTAGCCTCCGGCTACGAGGAAACTGGAGCTGCTaGTGTTTCTGTGGAGTGTTTCCGAATGGTGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSLRLRGNWSC*CFCGVFPNGVA Trigger: GGCTACACCATTCGGAAACACTCCACAGAAACATCAGCAGCTCCAGTTTCCTCGTAGCCGGAGGCTACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS GCA 72 bp | CTTCAACCGCAGACAGTCTCTCCAAGATTCGTTCTCTaGCAGAAAGACTCCTACCGTCCACAGAGGGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQPQTVSPRFVL*QKDSYRPQRAV Trigger: AACGGCCCTCTGTGGACGGTAGGAGTCTTTCTGGCAGAGAACGAATCTTGGAGAGACTGTCTGCGGTTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056157.14 |
||
| CDS CCA 72 bp | GACAGTCTCTCCAAGATTCCGTCCACAGAGGGCCGTTaGGAGGGCTCATGGGCACGACACTCATTAATGATT | + |
|
Preference number: 6 (lower is better) Translates to: DSLSKIPSTEGR*EGSWARHSLMI Trigger: AATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGAATCTTGGAGAGACTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120432.3 |
||
| CDS CAA 72 bp | AGACAGTCTCTCCAAGATTCCGTCCACAGAGGGCCGTaGGGAGGGCTCATGGGCACGACACTCATTAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: RQSLQDSVHRGP*GGLMGTTLIND Trigger: ATCATTAATGAGTGTCGTGCCCATGAGCCCTCCCAACGGCCCTCTGTGGACGGAATCTTGGAGAGACTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120432.3 |
||
| CDS CCA 72 bp | GGCTGTAGCAGGCCGTGCACACGGTTTCCTAGACGCTaGCATTGTTTCCGGCAGTATTTCATCTTTTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GCSRPCTRFPRR*HCFRQYFIFSH Trigger: GTGTGAAAAGATGAAATACTGCCGGAAACAATGCCAGCGTCTAGGAAACCGTGTGCACGGCCTGCTACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS TCA 72 bp | TCATTAATGATTTCCCGCAACAACTCAGGGCAATCCTaGCCCACTGGTTCCTGCTTCTTGTCCTCAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SLMISRNNSGQS*PTGSCFLSSAT Trigger: GGTGGCTGAGGACAAGAAGCAGGAACCAGTGGGTCAGGATTGCCCTGAGTTGTTGCGGGAAATCATTAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS TCA 72 bp | CCTGTCGATCTTCCTGCTGCCAGGATGCTGGCTGGCTaGCATCTGAAACGGTATTCCAATGATAAACCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PVDLPAARMLAG*HLKRYSNDKPE Trigger: TTCAGGTTTATCATTGGAATACCGTTTCAGATGTCAGCCAGCCAGCATCCTGGCAGCAGGAAGATCGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS TCA 72 bp | TCCACGGAGGTCCAAGATGTTCCTTTGGAATCTCCTTaGTTTGGAGATCTTGTGGGATCTCCTGTGTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: STEVQDVPLESP*FGDLVGSPVWV Trigger: AACCCACACAGGAGATCCCACAAGATCTCCAAATCAAGGAGATTCCAAAGGAACATCTTGGACCTCCGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CAA 90 bp | TTCAGTTTGGTCCACGGAGGTCCAAGATGTTCCTTTGGAATCTCCTaGATTTGGAGATCTTGTGGGATCTCCTGTGTGGGTTTTAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSLVHGGPRCSFGIS*IWRSCGISCVGFSE Trigger: CTCACTAAAACCCACACAGGAGATCCCACAAGATCTCCAAATCAAGGAGATTCCAAAGGAACATCTTGGACCTCCGTGGACCAAACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS GCA 72 bp | CAGGATAACTTTCATATTTTCATTTCCGTCTTCCTCTaGATCCTGTCGATCTTCCTGCTGCCAGGATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QDNFHIFISVFL*ILSIFLLPGCW Trigger: CCAGCATCCTGGCAGCAGGAAGATCGACAGGATGCAGAGGAAGACGGAAATGAAAATATGAAAGTTATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 72 bp | TCCTCCCAGACGTCTCTCAGCTTCTCATTCACTTCATaGAAGAGGATCTTATCATTGCCCACACTCACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSQTSLSFSFTS*KRILSLPTLTN Trigger: GTTTGTGAGTGTGGGCAATGATAAGATCCTCTTCCATGAAGTGAATGAGAAGCTGAGAGACGTCTGGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 72 bp | CAAATATGGGACTTCTTGCTGAACTTTTCTATCTGCTaGTTAGCCTCCTTCAGGACTTCATCAAAACGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QIWDFLLNFSIC*LASFRTSSKRP Trigger: GGGCCGTTTTGATGAAGTCCTGAAGGAGGCTAACCAGCAGATAGAAAAGTTCAGCAAGAAGTCCCATATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CCA 72 bp | TTCGGCCTGGGGGTTGTTGAATACTTTGATGGTAACTaGAGATCTGTGATACTCTCCTCTATAAATGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FGLGVVEYFDGN*RSVILSSINGA Trigger: AGCACCATTTATAGAGGAGAGTATCACAGATCTCCAGTTACCATCAAAGTATTCAACAACCCCCAGGCCGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CAA 72 bp | TTGCCCACACTCACAAACTTCCAAATATGGGACTTCTaGCTGAACTTTTCTATCTGCTGGTTAGCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPTLTNFQIWDF*LNFSICWLASF Trigger: GAAGGAGGCTAACCAGCAGATAGAAAAGTTCAGCAAGAAGTCCCATATTTGGAAGTTTGTGAGTGTGGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CAA 90 bp | ACGTCTCTCAGCTTCTCATTCACTTCATGGAAGAGGATCTTATCATaGCCCACACTCACAAACTTCCAAATATGGGACTTCTTGCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSLSFSFTSWKRILS*PTLTNFQIWDFLLN Trigger: GTTCAGCAAGAAGTCCCATATTTGGAAGTTTGTGAGTGTGGGCAATGATAAGATCCTCTTCCATGAAGTGAATGAGAAGCTGAGAGACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS GCA 72 bp | TTCCAAATATGGGACTTCTTGCTGAACTTTTCTATCTaGTGGTTAGCCTCCTTCAGGACTTCATCAAAACGG | + |
|
Preference number: 6 (lower is better) Translates to: FQIWDFLLNFSI*WLASFRTSSKR Trigger: CCGTTTTGATGAAGTCCTGAAGGAGGCTAACCAGCAGATAGAAAAGTTCAGCAAGAAGTCCCATATTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
||
| CDS CAA 72 bp | TGTGTGGGTTTTAGTGAGCATTGCTTCAGGGTTTTGTaGATTTCTTCCACGCTAATTTGCAACTGCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CVGFSEHCFRVL*ISSTLICNCIR Trigger: CCTGATGCAGTTGCAAATTAGCGTGGAAGAAATCAACAAAACCCTGAAGCAATGCTCACTAAAACCCACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
||
| CDS CAA 72 bp | TCCTGTGTGGGTTTTAGTGAGCATTGCTTCAGGGTTTaGTTGATTTCTTCCACGCTAATTTGCAACTGCATC | + |
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Preference number: 6 (lower is better) Translates to: SCVGFSEHCFRV*LISSTLICNCI Trigger: GATGCAGTTGCAAATTAGCGTGGAAGAAATCAACAAAACCCTGAAGCAATGCTCACTAAAACCCACACAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS CAA 90 bp | ATCTTATCATTGCCCACACTCACAAACTTCCAAATATGGGACTTCTaGCTGAACTTTTCTATCTGCTGGTTAGCCTCCTTCAGGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: ILSLPTLTNFQIWDF*LNFSICWLASFRTS Trigger: TGAAGTCCTGAAGGAGGCTAACCAGCAGATAGAAAAGTTCAGCAAGAAGTCCCATATTTGGAAGTTTGTGAGTGTGGGCAATGATAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
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| CDS GCA 72 bp | GCTTCTCATTCACTTCATGGAAGAGGATCTTATCATTaGCCACACTCACAAACTTCCAAATATGGGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASHSLHGRGSYH*PHSQTSKYGTS Trigger: AGAAGTCCCATATTTGGAAGTTTGTGAGTGTGGGCAATGATAAGATCCTCTTCCATGAAGTGAATGAGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
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| CDS CAA 72 bp | AGCTTCTCATTCACTTCATGGAAGAGGATCTTATCATaGCCCACACTCACAAACTTCCAAATATGGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: SFSFTSWKRILS*PTLTNFQIWDF Trigger: GAAGTCCCATATTTGGAAGTTTGTGAGTGTGGGCAATGATAAGATCCTCTTCCATGAAGTGAATGAGAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
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| CDS CAA 72 bp | TGTGATACTCTCCTCTATAAATGGTGCTCATTTTACTaGTCTTCAGTTTGGTCCACGGAGGTCCAAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: CDTLLYKWCSFY*SSVWSTEVQDV Trigger: AACATCTTGGACCTCCGTGGACCAAACTGAAGACAAGTAAAATGAGCACCATTTATAGAGGAGAGTATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS CAA 72 bp | GGAGAATCGAATTTCTTCATGGTTTTGATCTCGTCATaGAAAGTGAACCTCACTATTCCAACACTTTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: GESNFFMVLISS*KVNLTIPTLSA Trigger: GGCCGAAAGTGTTGGAATAGTGAGGTTCACTTTCAATGACGAGATCAAAACCATGAAGAAATTCGATTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS CAA 90 bp | CCAAATATACGCAAGATGTTGGGAGAATCGAATTTCTTCATGGTTTaGATCTCGTCATTGAAAGTGAACCTCACTATTCCAACACTTTCG | + |
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Preference number: 6 (lower is better) Translates to: PNIRKMLGESNFFMV*ISSLKVNLTIPTLS Trigger: CGAAAGTGTTGGAATAGTGAGGTTCACTTTCAATGACGAGATCAAAACCATGAAGAAATTCGATTCTCCCAACATCTTGCGTATATTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 |
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| CDS GCA 72 bp | TGCTTCAGGGTTTTGTTGATTTCTTCCACGCTAATTTaGAACTGCATCAGGATAACTTTCATATTTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: CFRVLLISSTLI*NCIRITFIFSF Trigger: AAATGAAAATATGAAAGTTATCCTGATGCAGTTGCAAATTAGCGTGGAAGAAATCAACAAAACCCTGAAGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
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| CDS CAA 72 bp | TTGCTTCAGGGTTTTGTTGATTTCTTCCACGCTAATTaGCAACTGCATCAGGATAACTTTCATATTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LLQGFVDFFHAN*QLHQDNFHIFI Trigger: AATGAAAATATGAAAGTTATCCTGATGCAGTTGCAAATTAGCGTGGAAGAAATCAACAAAACCCTGAAGCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056157.14 ENSMUST00000120432.3 ENSMUST00000145862.3 |
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