Pregenerated sensors for MLH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032498Ensembl transcript IDs: ENSMUST00000035079.10, ENSMUST00000135218.8, ENSMUST00000135695.2, ENSMUST00000199404.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCCTCTCCAAGTTCTCACTCTCAGCAGCTGCTTCAGCGGGGGCTaGGAGAGCAAGCATCTCCTCGTCCTCCCGCGTGGCCCTTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: FPLQVLTLSSCFSGG*ESKHLLVLPRGPFR Trigger: CCTGAAAGGGCCACGCGGGAGGACGAGGAGATGCTTGCTCTCCCAGCCCCCGCTGAAGCAGCTGCTGAGAGTGAGAACTTGGAGAGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR GCA 90 bp | GGCAGTACACCCCACAGCAACTCCCTAGTGCTGAGGACTGCCTCATaGACTCTCCCAGGTGCAGCAAGCCACAGGCACATTCTCTCATCA | + |
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Preference number: 1 (lower is better) Translates to: GSTPHSNSLVLRTAS*TLPGAASHRHILSS Trigger: TGATGAGAGAATGTGCCTGTGGCTTGCTGCACCTGGGAGAGTGCATGAGGCAGTCCTCAGCACTAGGGAGTTGCTGTGGGGTGTACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | CGTCGTCCTCTGTCCAGCCACTTTCAGGACTGTCTAAGGCCAGCATaGCCAGGTCGAAGAGTGGCGCTGGTTCCGATAACCTCAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: RRPLSSHFQDCLRPA*PGRRVALVPITSEH Trigger: GTGTTCTGAGGTTATCGGAACCAGCGCCACTCTTCGACCTGGCCATGCTGGCCTTAGACAGTCCTGAAAGTGGCTGGACAGAGGACGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | CCACATCAGAGTCCTCCCGATGTCTCTTTCTGGAGCTTCCTGGACTaGAAGTGGGTGCCGCCTTCTGGGCTGCGTCTGAAGTCTCCATTA | + |
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Preference number: 1 (lower is better) Translates to: PHQSPPDVSFWSFLD*KWVPPSGLRLKSPL Trigger: TAATGGAGACTTCAGACGCAGCCCAGAAGGCGGCACCCACTTCCAGTCCAGGAAGCTCCAGAAAGAGACATCGGGAGGACTCTGATGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR GCA 90 bp | CAGCAACTCCCTAGTGCTGAGGACTGCCTCATGCACTCTCCCAGGTaGAGCAAGCCACAGGCACATTCTCTCATCAGGACCTTATCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QQLPSAEDCLMHSPR*SKPQAHSLIRTLSQ Trigger: CTGAGATAAGGTCCTGATGAGAGAATGTGCCTGTGGCTTGCTGCACCTGGGAGAGTGCATGAGGCAGTCCTCAGCACTAGGGAGTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR GCA 90 bp | AGCCCAGCAGCTTGCTCTCAATGTGCTGCTGCACACGCTGCAGAATaGTCTCCTCGTGCAGAAAGTGAACTTCGTGCTTGGTGGGGTGTA | + |
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Preference number: 1 (lower is better) Translates to: SPAACSQCAAAHAAE*SPRAESELRAWWGV Trigger: TACACCCCACCAAGCACGAAGTTCACTTTCTGCACGAGGAGAGCATTCTGCAGCGTGTGCAGCAGCACATTGAGAGCAAGCTGCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | CAGAGTCCTCCCGATGTCTCTTTCTGGAGCTTCCTGGACTGGAAGTaGGTGCCGCCTTCTGGGCTGCGTCTGAAGTCTCCATTAGTGATT | + |
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Preference number: 1 (lower is better) Translates to: QSPPDVSFWSFLDWK*VPPSGLRLKSPLVI Trigger: AATCACTAATGGAGACTTCAGACGCAGCCCAGAAGGCGGCACCCACTTCCAGTCCAGGAAGCTCCAGAAAGAGACATCGGGAGGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | AGCATCTCCCGGAGAGTCTCATGGCACCGCTCACTAATCTCTTCCTaGAGACTCAAGACGCTGGTGAGGTTAATGATCCTCCTCCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: SISRRVSWHRSLISS*RLKTLVRLMILLLG Trigger: CCCCAGGAGGAGGATCATTAACCTCACCAGCGTCTTGAGTCTCCAGGAAGAGATTAGTGAGCGGTGCCATGAGACTCTCCGGGAGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | TCTCATCAGGACCTTATCTCAGCAACAGGGTGGTGGAGACCAGAATaGCAAGAGGCTCTATTAATATCTCAGCCCTGGGGAGGGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SHQDLISATGWWRPE*QEALLISQPWGGAA Trigger: AGCAGCCCCTCCCCAGGGCTGAGATATTAATAGAGCCTCTTGCCATTCTGGTCTCCACCACCCTGTTGCTGAGATAAGGTCCTGATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR TCA 90 bp | ATAGATCTGGCAGGTTGGCAAGCTGCAGGACATTGCCATCTTCTGTaGAATGCTTCGGAGGTAGGAGGTGTGAGCGGAAGGCTTTATAGA | + |
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Preference number: 1 (lower is better) Translates to: IDLAGWQAAGHCHLL*NASEVGGVSGRLYR Trigger: TCTATAAAGCCTTCCGCTCACACCTCCTACCTCCGAAGCATTTCACAGAAGATGGCAATGTCCTGCAGCTTGCCAACCTGCCAGATCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR TCA 90 bp | TGTTTCTTGACCCAAGTAGAAGGAAGCACAGAGTCTCTGAATGAGTaGGAATGGTGCCATTTTCCTGTGGAGGGACAGGGCATCCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: CFLTQVEGSTESLNE*EWCHFPVEGQGILS Trigger: TGAAAGGATGCCCTGTCCCTCCACAGGAAAATGGCACCATTCTCACTCATTCAGAGACTCTGTGCTTCCTTCTACTTGGGTCAAGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR GCA 90 bp | AGAATGGCAAGAGGCTCTATTAATATCTCAGCCCTGGGGAGGGGCTaGTCTCTGCATCTGTTGTTCCTGTCACTGATCTCTCACTATTTA | + |
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Preference number: 1 (lower is better) Translates to: RMARGSINISALGRG*SLHLLFLSLISHYL Trigger: TAAATAGTGAGAGATCAGTGACAGGAACAACAGATGCAGAGAGCAGCCCCTCCCCAGGGCTGAGATATTAATAGAGCCTCTTGCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | AGTTGCAGCACCAATACTGGGATACAGAACAAGAATAGTGAGCACTaGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SCSTNTGIQNKNSEH*KPWSLETKCPILWL Trigger: AAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGTGCTGCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | ATGGGTGTGTGTTTTTGGGCAAGTATGCTGCATATACAGTTTCAATaGCTTTTCTCAAGGCAGCTGATTCTACCAGACGGTCGACTAACC | + |
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Preference number: 1 (lower is better) Translates to: MGVCFWASMLHIQFQ*LFSRQLILPDGRLT Trigger: GGTTAGTCGACCGTCTGGTAGAATCAGCTGCCTTGAGAAAAGCCATTGAAACTGTATATGCAGCATACTTGCCCAAAAACACACACCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | CAGAGCCCCGACAGATCTGATGCTACATTACCTGAGGTACAGGAATaGGTGTGTGTTTTTGGGCAAGTATGCTGCATATACAGTTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: QSPDRSDATLPEVQE*VCVFGQVCCIYSFN Trigger: ATTGAAACTGTATATGCAGCATACTTGCCCAAAAACACACACCCATTCCTGTACCTCAGGTAATGTAGCATCAGATCTGTCGGGGCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR GCA 90 bp | TCCAATCAGGTTCCCTTCCTCATCGATCTCCACAGAGAAATAGTCTaGAAGCATCTCCGCTTTCTTCTTCAGAAACTCAACAATGTACTC | + |
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Preference number: 1 (lower is better) Translates to: SNQVPFLIDLHREIV*KHLRFLLQKLNNVL Trigger: GAGTACATTGTTGAGTTTCTGAAGAAGAAAGCGGAGATGCTTGCAGACTATTTCTCTGTGGAGATCGATGAGGAAGGGAACCTGATTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CCA 90 bp | TGCCAGAAGGCTAAGGTTTCAAACTTGAAAGATTTCAGTATGTACTaGACCCTTGTGCAGCTGTGTTGCAGAGAACGGTCATTCTTCATG | + |
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Preference number: 1 (lower is better) Translates to: CQKAKVSNLKDFSMY*TLVQLCCRERSFFM Trigger: CATGAAGAATGACCGTTCTCTGCAACACAGCTGCACAAGGGTCCAGTACATACTGAAATCTTTCAAGTTTGAAACCTTAGCCTTCTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR TCA 90 bp | ACTTCTTCACTGAATAGTTTGCATTCGATATATAGCCATTCATTTTaGAAGCTAGGGTTTTATCCTCACACCCAACTTCTATCAGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: TSSLNSLHSIYSHSF*KLGFYPHTQLLSVL Trigger: GAGAACTGATAGAAGTTGGGTGTGAGGATAAAACCCTAGCTTTCAAAATGAATGGCTATATATCGAATGCAAACTATTCAGTGAAGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTTTGACGTGGAGCCAGGCATGTCACTCTGCTGGCCTGAGAGGGTCGACGGTGCCCTGGTTGCCTaGACAGGGTTTAGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: QGFDVEPGMSLCWPERVDGALVA*TGFRRG Trigger: GCCCCTCCTAAACCCTGTGCAGGCAACCAGGGCACC...GTCGACCCTCTCAGGCCAGCAGAGTGACATGCCTGGCTCCACGTCAAAGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCTTTGACGTGGAGCCAGGCATGTCACTCTGCTGGCCTGAGAGGGTCGACTTTTCTCAAGGCAGCTaGTTCTACCAGACGGTCGAC | + |
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Preference number: 2 (lower is better) Translates to: QGFDVEPGMSLCWPERVDFSQGS*FYQTVD Trigger: GTCGACCGTCTGGTAGAATCAGCTGCCTTGAGAAAA...GTCGACCCTCTCAGGCCAGCAGAGTGACATGCCTGGCTCCACGTCAAAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCTCCCCAGAAGGCCCAGCAAGTCCTGGAAGCAAGGTCTGGGTGAAATATCCTCGTGCAGAAAGTaGACTTCGTGCTTGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SCLPRRPSKSWKQGLGEISSCRK*TSCLVG Trigger: CCCCACCAAGCACGAAGTTCACTTTCTGCACGAGGA...TATTTCACCCAGACCTTGCTTCCAGGACTTGCTGGGCCTTCTGGGGAGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCTTTGACGTGGAGCCAGGCATGTCACTCTGCTGGCCTGAGAGGGTCGACTGGTGGAGACCAGAATaGCAAGAGGCTCTATTAATA | + |
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Preference number: 2 (lower is better) Translates to: QGFDVEPGMSLCWPERVDWWRPE*QEALLI Trigger: TATTAATAGAGCCTCTTGCCATTCTGGTCTCCACCA...GTCGACCCTCTCAGGCCAGCAGAGTGACATGCCTGGCTCCACGTCAAAGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATCCCAATTCACCTCAGTGGCCAGTCGAAGAATGAAGATAGGCAGTCCCTGCTTCAGCGGGGGCTaGGAGAGCAAGCATCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSSQFTSVASRRMKIGSPCFSGG*ESKHLL Trigger: GAGGAGATGCTTGCTCTCCCAGCCCCCGCTGAAGCA...GGGACTGCCTATCTTCATTCTTCGACTGGCCACTGAGGTGAATTGGGATGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CAA 90 bp | GCTCTGTCAGTAGAGGGCACTACAGGGACAACAGGAGGGGTCTTCTaGCACACAGAGCTCAGCAGCAGTTTCTTCTTACAGGCAGTACAC | + |
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Preference number: 2 (lower is better) Translates to: ALSVEGTTGTTGGVF*HTELSSSFFLQAVH Trigger: GTGTACTGCCTGTAAGAAGAAACTGCTGCTGAGCTCTGTGTGCAAGAAGACCCCTCCTGTTGTCCCTGTAGTGCCCTCTACTGACAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGTCGAAGAGTGGCGCTGGTTCCGATAACCTCAGAACACCAAAGTTGGCAGAGCACTGGAAACCCTaGAGCTTGGAAACCAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: ARSKSGAGSDNLRTPKLAEHWKP*SLETKC Trigger: ACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTC...TGCCAACTTTGGTGTTCTGAGGTTATCGGAACCAGCGCCACTCTTCGACCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTACAAGAAGGCAGGCAGGCAAAGGCAGTTACCACAGGCCCGCCAACCAGACCTGAGGTACAGGAATaGGTGTGTGTTTTTGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: NLQEGRQAKAVTTGPPTRPEVQE*VCVFGQ Trigger: TTGCCCAAAAACACACACCCATTCCTGTACCTCAGG...TCTGGTTGGCGGGCCTGTGGTAACTGCCTTTGCCTGCCTGCCTTCTTGTAGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCATCTGCCAAGCTAAGGCAAGAACCTACAAGAAGGCAGGCAGGCAAAGGGGTGCCATTTTCCTGTaGAGGGACAGGGCATCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TGICQAKARTYKKAGRQRGAIFL*RDRASF Trigger: AAAGGATGCCCTGTCCCTCCACAGGAAAATGGCACC...CCTTTGCCTGCCTGCCTTCTTGTAGGTTCTTGCCTTAGCTTGGCAGATGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGCCTCATGCACTCTCCCAGGTGCAGCAAGCCACAGGCACATTCTCTCATCGAGTCTCTGAATGAGTaGGAATGGTGCCATTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: DCLMHSPRCSKPQAHSLIESLNE*EWCHFP Trigger: AGGAAAATGGCACCATTCTCACTCATTCAGAGACTC...GATGAGAGAATGTGCCTGTGGCTTGCTGCACCTGGGAGAGTGCATGAGGCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGAGGGGCTGCTCTCTGCATCTGTTGTTCCTGTCACTGATCTCTCACTATGAAGCACAGAGTCTCTaGATGAGTGAGAATGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LGRGCSLHLLFLSLISHYEAQSL*MSENGA Trigger: GGCACCATTCTCACTCATTCAGAGACTCTGTGCTTC...ATAGTGAGAGATCAGTGACAGGAACAACAGATGCAGAGAGCAGCCCCTCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCGACAAGGCCCCACCCTaGCTGACAACCTCTTTCACA | + |
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Preference number: 2 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGDKAPP*LTTSFT Trigger: TGTGAAAGAGGTTGTCAGCCAGGGTGGGGCCTTGTC...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTAATATCTCAGCCCTaGGGAGGGGCTGCTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGLISQP*GGAALC Trigger: GCAGAGAGCAGCCCCTCCCCAGGGCTGAGATATTAA...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGGTAGCAAGCAGCTGTCATTTCCTTCCCGGAAGCATTTTCCACCATTTCTGTACTGGACCCTTGTaGAGCTGTGTTGCAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: PGVASSCHFLPGSIFHHFCTGPL*SCVAEN Trigger: GTTCTCTGCAACACAGCTGCACAAGGGTCCAGTACA...GAAATGGTGGAAAATGCTTCCGGGAAGGAAATGACAGCTGCTTGCTACCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CAA 90 bp | CTACCAGACGGTCGACTAACCGCATTTCCAAAGATGGAGCGAATGTaGTCCACGGTTGTGGCATTGGGCAGTGTTCTGACATCAGATACT | + |
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Preference number: 2 (lower is better) Translates to: LPDGRLTAFPKMERM*STVVALGSVLTSDT Trigger: AGTATCTGATGTCAGAACACTGCCCAATGCCACAACCGTGGACAACATTCGCTCCATCTTTGGAAATGCGGTTAGTCGACCGTCTGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CAA 90 bp | TCAAAGACTTTGTATAGATCTGGCAGGTTGGCAAGCTGCAGGACATaGCCATCTTCTGTGAAATGCTTCGGAGGTAGGAGGTGTGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: SKTLYRSGRLASCRT*PSSVKCFGGRRCER Trigger: CCGCTCACACCTCCTACCTCCGAAGCATTTCACAGAAGATGGCAATGTCCTGCAGCTTGCCAACCTGCCAGATCTATACAAAGTCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR GCA 90 bp | CTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATGGTCATGCAATGCACTCTCCCAGGTaGAGCAAGCCACAGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: LFCGFQISTIHFALDGHAMHSPR*SKPQAH Trigger: ATGTGCCTGTGGCTTGCTGCACCTGGGAGAGTGCAT...TGCATGACCATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCATCTGCCAAGCTAAGGCAAGAACCTACAAGAAGGCAGGCAGGCAAAGGAAGAATAGTGAGCACTaGAAACCCTGGAGCTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TGICQAKARTYKKAGRQRKNSEH*KPWSLE Trigger: TTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTT...CCTTTGCCTGCCTGCCTTCTTGTAGGTTCTTGCCTTAGCTTGGCAGATGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCATCTCAGCAACAGGGTaGTGGAGACCAGAATGGCAA | + |
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Preference number: 2 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGISATG*WRPEWQ Trigger: TTGCCATTCTGGTCTCCACCACCCTGTTGCTGAGAT...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTCCACGGTTGTGGCATTGGGCAGTGTTCTGACATCAGATACTGTCTCACCTCCATTGTCTTGGATCTaGATTAGCTTCAGGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: LSTVVALGSVLTSDTVSPPLSWI*ISFRPP Trigger: AGGTGGCCTGAAGCTAATTCAGATCCAAGACAATGG...AGGTGAGACAGTATCTGATGTCAGAACACTGCCCAATGCCACAACCGTGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCAAGAATAGTGAGCACTaGAAACCCTGGAGCTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGKNSEH*KPWSLE Trigger: TTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTT...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAGATTTCAGTATGTACTGGACCCTTGTGCAGCTGTGTTGCAGAGAACGGCCGCATTTCCAAAGATaGAGCGAATGTTGTCCACGG | + |
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Preference number: 2 (lower is better) Translates to: LKDFSMYWTLVQLCCRERPHFQR*SECCPR Trigger: CCGTGGACAACATTCGCTCCATCTTTGGAAATGCGG...CCGTTCTCTGCAACACAGCTGCACAAGGGTCCAGTACATACTGAAATCTTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR CAA 90 bp | TCTATCAGTTCTCGACTAACCGCATTTCCAAAGATGGAGCGAATGTaGTCCACGGTTGTGGCATTGGGCAGTGTTCTGACATCAGATACT | + |
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Preference number: 2 (lower is better) Translates to: SISSRLTAFPKMERM*STVVALGSVLTSDT Trigger: AGTATCTGATGTCAGAACACTGCCCAATGCCACAACCGTGGACAACATTCGCTCCATCTTTGGAAATGCGGTTAGTCGAGAACTGATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCACACGTGAGTTTATTTaGAGCCAATCCACAGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGTREFI*SQSTGE Trigger: TTCACCTGTGGATTGGCTGCAAATAAACTCACGTGT...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGCCATACACTTCGCCTTaGATGGTCATGCAGTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: KNSEHWKPWSLETKCPILPYTSP*MVMQSL Trigger: TAGAGACTGCATGACCATCCAAGGCGAAGTGTATGG...CAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
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| 3UTR CAA 90 bp | AGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTaGGATGGTCATGCAGTCTCTACGGTGGCTATGATTGTATTTAAC | + |
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Preference number: 2 (lower is better) Translates to: SVLFCGFQISTIHFA*DGHAVSTVAMIVFN Trigger: GTTAAATACAATCATAGCCACCGTAGAGACTGCATGACCATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTAAGTTGCAGCACCAATACTGGGATACAGAACAAGAATAGTGAGCACTGGCCAGATCTTCCTTCCTaGTTCCAGTGCCATTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: TLSCSTNTGIQNKNSEHWPDLPS*FQCHCL Trigger: AAGACAATGGCACTGGAATCAGGAAGGAAGATCTGG...CCAGTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGTGCTGCAACTTAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTTGGGCAAGTATGCTGCATATACAGTTTCAATGGCTTTTCTCAAGGCAGTTGCAGCTTTCCATCTaGGTAACTTGCTCTGTACGC | + |
|
Preference number: 2 (lower is better) Translates to: CFWASMLHIQFQWLFSRQLQLSI*VTCSVR Trigger: GCGTACAGAGCAAGTTACTCAGATGGAAAGCTGCAA...CTGCCTTGAGAAAAGCCATTGAAACTGTATATGCAGCATACTTGCCCAAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CCA 90 bp | CTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATGGTCATGCACATATACAGTTTCAATaGCTTTTCTCAAGGCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LFCGFQISTIHFALDGHAHIQFQ*LFSRQL Trigger: CAGCTGCCTTGAGAAAAGCCATTGAAACTGTATATG...TGCATGACCATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAATAGTCTGCAAGCATCTCCGCTTTCTTCTTCAGAAACTCAACAATGTACTCTCACTAATCTCTTCCTaGAGACTCAAGACGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: EIVCKHLRFLLQKLNNVLSLISS*RLKTLV Trigger: CACCAGCGTCTTGAGTCTCCAGGAAGAGATTAGTGA...GAGTACATTGTTGAGTTTCTGAAGAAGAAAGCGGAGATGCTTGCAGACTATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CAA 90 bp | TTAACTTTCCAACATAGCTTCTGCCAGAAGGCTAAGGTTTCAAACTaGAAAGATTTCAGTATGTACTGGACCCTTGTGCAGCTGTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LTFQHSFCQKAKVSN*KDFSMYWTLVQLCC Trigger: GCAACACAGCTGCACAAGGGTCCAGTACATACTGAAATCTTTCAAGTTTGAAACCTTAGCCTTCTGGCAGAAGCTATGTTGGAAAGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTTGGTCTAGATCAGGCAAGCCCTCAAATATGTGTGATGATGAAGCATGGCTGGTTTTTGGGCAAGTATaGTGCATATACAGTTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VWSRSGKPSNMCDDEAWLVFGQV*CIYSFN Trigger: ATTGAAACTGTATATGCAGCATACTTGCCCAAAAAC...CAGCCATGCTTCATCATCACACATATTTGAGGGCTTGCCTGATCTAGACCAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGTTTTTGGGCAAGTATGCTGCATATACAGTTTCAATGGCTTTTCTCAAGACACGTGAGTTTATTTaGAGCCAATCCACAGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CVFLGKYAAYTVSMAFLKTREFI*SQSTGE Trigger: TTCACCTGTGGATTGGCTGCAAATAAACTCACGTGT...CTTGAGAAAAGCCATTGAAACTGTATATGCAGCATACTTGCCCAAAAACACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAGTCTGCAAGCATCTCCGCTTTCTTCTTCAGAAACTCAACAATGTACTCGGTCATTCTTCATGCTaGTTTTTAGAGAGGCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: EIVCKHLRFLLQKLNNVLGHSSC*FLERLF Trigger: AAAAAGCCTCTCTAAAAATCAGCATGAAGAATGACC...GAGTACATTGTTGAGTTTCTGAAGAAGAAAGCGGAGATGCTTGCAGACTATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | GGGCTGGGAGAGCAAGCATCTCCTCGTCCTCCCGCGTaGCCCTTTCAGGAGATCCCTCCGTCCTGGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLGEQASPRPPA*PFQEIPPSWPL Trigger: GAGGGGCCAGGACGGAGGGATCTCCTGAAAGGGCCACGCGGGAGGACGAGGAGATGCTTGCTCTCCCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | CCCCACAGCAACTCCCTAGTGCTGAGGACTGCCTCATaGACTCTCCCAGGTGCAGCAAGCCACAGGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: PHSNSLVLRTAS*TLPGAASHRHI Trigger: AATGTGCCTGTGGCTTGCTGCACCTGGGAGAGTGCATGAGGCAGTCCTCAGCACTAGGGAGTTGCTGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | CCCGATGTCTCTTTCTGGAGCTTCCTGGACTGGAAGTaGGTGCCGCCTTCTGGGCTGCGTCTGAAGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PDVSFWSFLDWK*VPPSGLRLKSP Trigger: TGGAGACTTCAGACGCAGCCCAGAAGGCGGCACCCACTTCCAGTCCAGGAAGCTCCAGAAAGAGACATCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | CCTAGTGCTGAGGACTGCCTCATGCACTCTCCCAGGTaGAGCAAGCCACAGGCACATTCTCTCATCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: PSAEDCLMHSPR*SKPQAHSLIRT Trigger: GGTCCTGATGAGAGAATGTGCCTGTGGCTTGCTGCACCTGGGAGAGTGCATGAGGCAGTCCTCAGCACTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | CTGGAGGAATTGGAGCCCAGCAGCTTGCTCTCAATGTaGTGCTGCACACGCTGCAGAATGCTCTCCTCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LEELEPSSLLSM*CCTRCRMLSSC Trigger: GCACGAGGAGAGCATTCTGCAGCGTGTGCAGCAGCACATTGAGAGCAAGCTGCTGGGCTCCAATTCCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | CTGGAGCTTCCTGGACTGGAAGTGGGTGCCGCCTTCTaGGCTGCGTCTGAAGTCTCCATTAGTGATTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LELPGLEVGAAF*AASEVSISDSL Trigger: GAGGGAATCACTAATGGAGACTTCAGACGCAGCCCAGAAGGCGGCACCCACTTCCAGTCCAGGAAGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | CTGTCCAGCCACTTTCAGGACTGTCTAAGGCCAGCATaGCCAGGTCGAAGAGTGGCGCTGGTTCCGATAACC | + |
|
Preference number: 3 (lower is better) Translates to: LSSHFQDCLRPA*PGRRVALVPIT Trigger: GGTTATCGGAACCAGCGCCACTCTTCGACCTGGCCATGCTGGCCTTAGACAGTCCTGAAAGTGGCTGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | CAGGGCTTTGACGTGGAGCCAGGCATGTCACTCTGCTaGCCTGAGAGGGTCGACTCCTCCAGTATATACTGC | + |
|
Preference number: 3 (lower is better) Translates to: QGFDVEPGMSLC*PERVDSSSIYC Trigger: GCAGTATATACTGGAGGAGTCGACCCTCTCAGGCCAGCAGAGTGACATGCCTGGCTCCACGTCAAAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | TTCCAGGGCTTTGACGTGGAGCCAGGCATGTCACTCTaGTGGCCTGAGAGGGTCGACTCCTCCAGTATATAC | + |
|
Preference number: 3 (lower is better) Translates to: FQGFDVEPGMSL*WPERVDSSSIY Trigger: GTATATACTGGAGGAGTCGACCCTCTCAGGCCAGCAGAGTGACATGCCTGGCTCCACGTCAAAGCCCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR TCA 72 bp | CATCCTTTCAGAGCAGTGACAAGGCCCCACCCTGGCTaGCAACCTCTTTCACAGAGCCCCGACAGATCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HPFRAVTRPHPG*QPLSQSPDRSD Trigger: ATCAGATCTGTCGGGGCTCTGTGAAAGAGGTTGTCAGCCAGGGTGGGGCCTTGTCACTGCTCTGAAAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR TCA 72 bp | GCAGGTTGGCAAGCTGCAGGACATTGCCATCTTCTGTaGAATGCTTCGGAGGTAGGAGGTGTGAGCGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGWQAAGHCHLL*NASEVGGVSGR Trigger: CCTTCCGCTCACACCTCCTACCTCCGAAGCATTTCACAGAAGATGGCAATGTCCTGCAGCTTGCCAACCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | GGTAGTGTTGAGGAGGTAGAGCTTGGTCTGGTGCTGTaGCAAGGCCCACTGAGGATTCACACAGCCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSVEEVELGLVL*QGPLRIHTAHK Trigger: TTTGTGGGCTGTGTGAATCCTCAGTGGGCCTTGGCACAGCACCAGACCAAGCTCTACCTCCTCAACACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGTCGAAGAGTGGCGCTGGTTCCGATAACCTCAGAACACCAAAGTTGGCAGTATGTACTGGACCCTaGTGCAGCTGTGTTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARSKSGAGSDNLRTPKLAVCTGP*CSCVAE Trigger: CTCTGCAACACAGCTGCACAAGGGTCCAGTACATAC...TGCCAACTTTGGTGTTCTGAGGTTATCGGAACCAGCGCCACTCTTCGACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR TCA 72 bp | TGCACACGCTGCAGAATGCTCTCCTCGTGCAGAAAGTaGACTTCGTGCTTGGTGGGGTGTACATTGACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CTRCRMLSSCRK*TSCLVGCTLTS Trigger: GGACGTCAATGTACACCCCACCAAGCACGAAGTTCACTTTCTGCACGAGGAGAGCATTCTGCAGCGTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | GCTTGCTCTCAATGTGCTGCTGCACACGCTGCAGAATaGTCTCCTCGTGCAGAAAGTGAACTTCGTGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ACSQCAAAHAAE*SPRAESELRAW Trigger: CCAAGCACGAAGTTCACTTTCTGCACGAGGAGAGCATTCTGCAGCGTGTGCAGCAGCACATTGAGAGCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | CCAGAATGGCAAGAGGCTCTATTAATATCTCAGCCCTaGGGAGGGGCTGCTCTCTGCATCTGTTGTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PEWQEALLISQP*GGAALCICCSC Trigger: ACAGGAACAACAGATGCAGAGAGCAGCCCCTCCCCAGGGCTGAGATATTAATAGAGCCTCTTGCCATTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | CGGAGAGTCTCATGGCACCGCTCACTAATCTCTTCCTaGAGACTCAAGACGCTGGTGAGGTTAATGATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RRVSWHRSLISS*RLKTLVRLMIL Trigger: GAGGATCATTAACCTCACCAGCGTCTTGAGTCTCCAGGAAGAGATTAGTGAGCGGTGCCATGAGACTCTCCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGCATCTGCCAAGCTAAGGCAAGAACCTACAAGAAGGCAGGCAGGCAAAGGGCAGGATGCTGTTTCTaGACCCAAGTAGAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TGICQAKARTYKKAGRQRAGCCF*TQVEGS Trigger: GCTTCCTTCTACTTGGGTCAAGAAACAGCATCCTGC...CCTTTGCCTGCCTGCCTTCTTGTAGGTTCTTGCCTTAGCTTGGCAGATGCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAATGTTGTCCACGGTTGTGGCATTGGGCAGTGTTCTGACATCAGATACTGTCGAATGTTGTCCACGGTaGTGGCATTGGGCAGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RMLSTVVALGSVLTSDTVECCPR*WHWAVF Trigger: GAACACTGCCCAATGCCACAACCGTGGACAACATTC...GACAGTATCTGATGTCAGAACACTGCCCAATGCCACAACCGTGGACAACATTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135218.8 ENSMUST00000135695.2 |
||
| 3UTR TCA 72 bp | TGCACAGGGTTTAGGAGGGGCTTGCAGCTTTCCATCTaGGTAACTTGCTCTGTACGCACATTTCCCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CTGFRRGLQLSI*VTCSVRTFPIS Trigger: GCTGATGGGAAATGTGCGTACAGAGCAAGTTACTCAGATGGAAAGCTGCAAGCCCCTCCTAAACCCTGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR TCA 72 bp | ACCCAAGTAGAAGGAAGCACAGAGTCTCTGAATGAGTaGGAATGGTGCCATTTTCCTGTGGAGGGACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TQVEGSTESLNE*EWCHFPVEGQG Trigger: GCCCTGTCCCTCCACAGGAAAATGGCACCATTCTCACTCATTCAGAGACTCTGTGCTTCCTTCTACTTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | AGAGGCTCTATTAATATCTCAGCCCTGGGGAGGGGCTaGTCTCTGCATCTGTTGTTCCTGTCACTGATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RGSINISALGRG*SLHLLFLSLIS Trigger: AGAGATCAGTGACAGGAACAACAGATGCAGAGAGCAGCCCCTCCCCAGGGCTGAGATATTAATAGAGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | TTGGCAAGCTGCAGGACATTGCCATCTTCTGTGAAATaGTTCGGAGGTAGGAGGTGTGAGCGGAAGGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LASCRTLPSSVK*FGGRRCERKAL Trigger: TAAAGCCTTCCGCTCACACCTCCTACCTCCGAAGCATTTCACAGAAGATGGCAATGTCCTGCAGCTTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | GACCTTATCTCAGCAACAGGGTGGTGGAGACCAGAATaGCAAGAGGCTCTATTAATATCTCAGCCCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLISATGWWRPE*QEALLISQPWG Trigger: TCCCCAGGGCTGAGATATTAATAGAGCCTCTTGCCATTCTGGTCTCCACCACCCTGTTGCTGAGATAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCACTGGGCAGGATGCTGTTTCTTGACCCAAGTAGAAGGAAGCACAGAGTCTTTCCATCTGAGTAACTaGCTCTGTACGCACATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PHWAGCCFLTQVEGSTESFHLSN*LCTHIS Trigger: GGAAATGTGCGTACAGAGCAAGTTACTCAGATGGAA...AGACTCTGTGCTTCCTTCTACTTGGGTCAAGAAACAGCATCCTGCCCAGTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR TCA 72 bp | AACACCGGGCTCATAGGAGTGTTCCAGAGGCTCAGCTaGGAATTAACTTTCCAACATAGCTTCTGCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NTGLIGVFQRLS*ELTFQHSFCQK Trigger: CTTCTGGCAGAAGCTATGTTGGAAAGTTAATTCTCAGCTGAGCCTCTGGAACACTCCTATGAGCCCGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR TCA 72 bp | GTTCTGAGGGCTGATTTCCAAACCTGCTTTGCATTATaGAGCTCTGTCAGTAGAGGGCACTACAGGGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: VLRADFQTCFAL*SSVSRGHYRDN Trigger: GTTGTCCCTGTAGTGCCCTCTACTGACAGAGCTTCATAATGCAAAGCAGGTTTGGAAATCAGCCCTCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR TCA 72 bp | TCGTGCTTGGTGGGGTGTACATTGACGTCCACGTTCTaGGGGCTGATTTCCAAACCTGCTTTGCATTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SCLVGCTLTSTF*GLISKPALHYE Trigger: TTCATAATGCAAAGCAGGTTTGGAAATCAGCCCTCAGAACGTGGACGTCAATGTACACCCCACCAAGCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | TCAGCTGTTTTGGTTGTAATAGTGACATGGGCCACATaGCTTATGCTTGCCAATGCCTCACCACGAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SAVLVVIVTWAT*LMLANASPRKP Trigger: TGGCTTTCGTGGTGAGGCATTGGCAAGCATAAGCCATGTGGCCCATGTCACTATTACAACCAAAACAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGTGTTTTTGGGCAAGTATGCTGCATATACAGTTTCAATGGCTTTTCTCAATCAGGGTGCCCTGGTaGCCTGCACAGGGTTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GVCFWASMLHIQFQWLFSIRVPW*PAQGLG Trigger: TCCTAAACCCTGTGCAGGCAACCAGGGCACCCTGAT...TGAGAAAAGCCATTGAAACTGTATATGCAGCATACTTGCCCAAAAACACACACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCACGGTTGTGGCATTGGGCAGTGTTCTGACATCAGATACTGTCTCACCTTGAAACTAATGCCTGAATaGTGTATTGAATACCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VHGCGIGQCSDIRYCLTLKLMPE*CIEYLP Trigger: TGGCAGGTATTCAATACACAATTCAGGCATTAGTTT...CAAGGTGAGACAGTATCTGATGTCAGAACACTGCCCAATGCCACAACCGTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | TCAAAGACTTTGTATAGATCTGGCAGGTTGGCAAGCTaGAGGACATTGCCATCTTCTGTGAAATGCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: SKTLYRSGRLAS*RTLPSSVKCFG Trigger: TCCGAAGCATTTCACAGAAGATGGCAATGTCCTGCAGCTTGCCAACCTGCCAGATCTATACAAAGTCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | AGAACAAGAATAGTGAGCACTGGAAACCCTGGAGCTTaGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: RTRIVSTGNPGA*KPSVLFCGFQI Trigger: AATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | TTCTCTCATCAGGACCTTATCTCAGCAACAGGGTGGTaGAGACCAGAATGGCAAGAGGCTCTATTAATATCT | + |
|
Preference number: 3 (lower is better) Translates to: FSHQDLISATGW*RPEWQEALLIS Trigger: AGATATTAATAGAGCCTCTTGCCATTCTGGTCTCCACCACCCTGTTGCTGAGATAAGGTCCTGATGAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | ACATTCTCTCATCAGGACCTTATCTCAGCAACAGGGTaGTGGAGACCAGAATGGCAAGAGGCTCTATTAATA | + |
|
Preference number: 3 (lower is better) Translates to: TFSHQDLISATG*WRPEWQEALLI Trigger: TATTAATAGAGCCTCTTGCCATTCTGGTCTCCACCACCCTGTTGCTGAGATAAGGTCCTGATGAGAGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR GCA 72 bp | GTACAGGAATGGGTGTGTGTTTTTGGGCAAGTATGCTaGATATACAGTTTCAATGGCTTTTCTCAAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VQEWVCVFGQVC*IYSFNGFSQGS Trigger: GCTGCCTTGAGAAAAGCCATTGAAACTGTATATGCAGCATACTTGCCCAAAAACACACACCCATTCCTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135218.8 ENSMUST00000135695.2 |
||
| 3UTR CCA 72 bp | ACCAATACTGGGATACAGAACAAGAATAGTGAGCACTaGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: TNTGIQNKNSEH*KPWSLETKCPI Trigger: AATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | GACAGATCTGATGCTACATTACCTGAGGTACAGGAATaGGTGTGTGTTTTTGGGCAAGTATGCTGCATATAC | + |
|
Preference number: 3 (lower is better) Translates to: DRSDATLPEVQE*VCVFGQVCCIY Trigger: GTATATGCAGCATACTTGCCCAAAAACACACACCCATTCCTGTACCTCAGGTAATGTAGCATCAGATCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR CCA 72 bp | GCTAAGGTTTCAAACTTGAAAGATTTCAGTATGTACTaGACCCTTGTGCAGCTGTGTTGCAGAGAACGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: AKVSNLKDFSMY*TLVQLCCRERS Trigger: TGACCGTTCTCTGCAACACAGCTGCACAAGGGTCCAGTACATACTGAAATCTTTCAAGTTTGAAACCTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATGGGTGTGTGTTTTTGGGCAAGTATGCTGCATATACAGTTTCAATGGCTTTTCTACCAGACGGTGGTaGATGAAGAGTAGGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: EWVCVFGQVCCIYSFNGFSTRRW*MKSRKM Trigger: CATTTTCCTACTCTTCATCAACCACCGTCTGGTAGA...AAAGCCATTGAAACTGTATATGCAGCATACTTGCCCAAAAACACACACCCATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
||
| 3UTR CCA 72 bp | TTCTGCCTTTGCTTGAATTCCCTTCTCCTGCTTAAATaGATCAGACTTCCAAGTCACTTTGGGAAACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FCLCLNSLLLLK*IRLPSHFGKLL Trigger: AAGAAGTTTCCCAAAGTGACTTGGAAGTCTGATCCATTTAAGCAGGAGAAGGGAATTCAAGCAAAGGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
||
| 3UTR TCA 72 bp | CTGAATAGTTTGCATTCGATATATAGCCATTCATTTTaGAAGCTAGGGTTTTATCCTCACACCCAACTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LNSLHSIYSHSF*KLGFYPHTQLL Trigger: TAGAAGTTGGGTGTGAGGATAAAACCCTAGCTTTCAAAATGAATGGCTATATATCGAATGCAAACTATTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
||
| CDS-3UTR GCA 90 bp | AACCTACAAGAAGGCAGGCAGGCAAAGGCAGTTACCACAGGCCCGCCAACCAGACTTCCCCCGCCGCTATaGGGTTCACTACCGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NLQEGRQAKAVTTGPPTRLPPPL*GSLPSR Trigger: ACGAGACGGTAGTGAACCGCATAGCGGCGGGGGAAG...TCTGGTTGGCGGGCCTGTGGTAACTGCCTTTGCCTGCCTGCCTTCTTGTAGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCATCCCAATTCACCTCAGTGGCCAGTCGAAGAATGAAGATAGGCAGTCCCGCATTGGCCGGCCGCTaGATGACTTCCCCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQFTSVASRRMKIGSPALAGR*MTSPAA Trigger: AGCGGCGGGGGAAGTCATTCAGCGGCCGGCCAATGC...GGGACTGCCTATCTTCATTCTTCGACTGGCCACTGAGGTGAATTGGGATGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| CDS-3UTR GCA 90 bp | CTAACCGCATTTCCAAAGATGGAGCGAATGTTGTCCACGGTTGTGGCATTGGGCGGTGCCCTGGTTGCCTaGACAGGGTTTAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTAFPKMERMLSTVVALGGALVA*TGFRRG Trigger: GCCCCTCCTAAACCCTGTGCAGGCAACCAGGGCACC...GCCCAATGCCACAACCGTGGACAACATTCGCTCCATCTTTGGAAATGCGGTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATATGGCCGGCCGCTGAATaGCTTCCCCCGCCGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGAWKPSVLFCGFQISTIWPAAE*LPPPLC Trigger: GCATAGCGGCGGGGGAAGTCATTCAGCGGCCGGCCA...TATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACGCATTGGCCGGCCGCTaGATGACTTCCCCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LELGNQVSYSVASRLVPYALAGR*MTSPAA Trigger: AGCGGCGGGGGAAGTCATTCAGCGGCCGGCCAATGC...GTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATGGTCATGCAGTCTGGTCCTGGGGCTGGCTaGGCCCAAGGCTGCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SVASRLVPYTSPWMVMQSGPGAG*AQGCLQ Trigger: CTGTAAGCAGCCTTGGGCCCAGCCAGCCCCAGGACC...AGACTGCATGACCATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATGCAGGGTCCTGGGGCTaGCTGGGCCCAAGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSVLFCGFQISTIHFALDAGSWG*LGPRLL Trigger: AAGCAGCCTTGGGCCCAGCCAGCCCCAGGACCCTGC...ATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTGCTTCAGCGGGGGCTaGGAGAGCAAGCATCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGCFSGG*ESKHLL Trigger: GAGGAGATGCTTGCTCTCCCAGCCCCCGCTGAAGCA...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTCCACTTCCAGGGCTTTaGCGTGGAGCCAGGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGNPGAWKPSVLFCGFQIPLPGL*RGARHV Trigger: GACATGCCTGGCTCCACGTCAAAGCCCTGGAAGTGG...AATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTACTTCCCCCGCCGCTATaGGGTTCACTACCGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LETLELGNQVSYSVASRLLPPPL*GSLPSR Trigger: ACGAGACGGTAGTGAACCGCATAGCGGCGGGGGAAG...TAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
||
| CDS-3UTR GCA 90 bp | AAGAATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGGGTGCCCTGGTTGCCTaGACAGGGTTTAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNSEHWKPWSLETKCPILGALVA*TGFRRG Trigger: GCCCCTCCTAAACCCTGTGCAGGCAACCAGGGCACC...CAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATGGTCATGCAGTCTTTCCTGGACTGGAAGTaGGTGCCGCCTTCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVASRLVPYTSPWMVMQSFLDWK*VPPSGL Trigger: CAGCCCAGAAGGCGGCACCCACTTCCAGTCCAGGAA...AGACTGCATGACCATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | CACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTGGAGCTTCCTGGACTaGAAGTGGGTGCCGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HWKPWSLETKCPILWLPDWSFLD*KWVPPS Trigger: AGAAGGCGGCACCCACTTCCAGTCCAGGAAGCTCCA...ATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | CACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATCTTTCTGGAGCTTCCTaGACTGGAAGTGGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HWKPWSLETKCPILWLPDLSGAS*TGSGCR Trigger: GCGGCACCCACTTCCAGTCCAGGAAGCTCCAGAAAG...ATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATGGTCATGCAGTCTGGCATGTCACTCTGCTaGCCTGAGAGGGTCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVASRLVPYTSPWMVMQSGMSLC*PERVDS Trigger: GGAGTCGACCCTCTCAGGCCAGCAGAGTGACATGCC...AGACTGCATGACCATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR TCA 90 bp | GAAATAGTCTGCAAGCATCTCCGCTTTCTTCTTCAGAAACTCAACAATGTACTCTGGCCGGCCGCTGAATaGCTTCCCCCGCCGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: EIVCKHLRFLLQKLNNVLWPAAE*LPPPLC Trigger: GCATAGCGGCGGGGGAAGTCATTCAGCGGCCGGCCA...GAGTACATTGTTGAGTTTCTGAAGAAGAAAGCGGAGATGCTTGCAGACTATTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGAATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTGTCACTCTGCTGGCCTaGGAGGGTCGACTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKNSEHWKPWSLETKCPIVTLLA*EGRLLQ Trigger: CTGGAGGAGTCGACCCTCTCAGGCCAGCAGAGTGAC...AATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR TCA 90 bp | AAGAATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGTGCCAAGGCCCACTaGGGATTCACACAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KNSEHWKPWSLETKCPILCAKAH*GFTQPT Trigger: TGTGGGCTGTGTGAATCCTCAGTGGGCCTTGGCACA...CAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR GCA 90 bp | CACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATGCACACGCTGCAGAATaGTCTCCTCGTGCAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HWKPWSLETKCPILWLPDAHAAE*SPRAES Trigger: ACTTTCTGCACGAGGAGAGCATTCTGCAGCGTGTGC...ATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR GCA 90 bp | GGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGCTGCTGCACACGCTaGAGAATGCTCTCCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNQVSYSVASRLVPYTSPCCCTR*RMLSSC Trigger: GCACGAGGAGAGCATTCTGCAGCGTGTGCAGCAGCA...AGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTATGGAGCCCAGCAGCTTaGTCTCAATGTGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LETLELGNQVSYSVASRLWSPAA*SQCAAA Trigger: TGCAGCAGCACATTGAGAGCAAGCTGCTGGGCTCCA...TAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | CACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATACATCCTGGAGGAATTaGAGCCCAGCAGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HWKPWSLETKCPILWLPDTSWRN*SPAACS Trigger: AGAGCAAGCTGCTGGGCTCCAATTCCTCCAGGATGT...ATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| 3UTR CAA 72 bp | GGTCGACTAACCGCATTTCCAAAGATGGAGCGAATGTaGTCCACGGTTGTGGCATTGGGCAGTGTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GRLTAFPKMERM*STVVALGSVLT Trigger: TGTCAGAACACTGCCCAATGCCACAACCGTGGACAACATTCGCTCCATCTTTGGAAATGCGGTTAGTCGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATTCCTCGTGCAGAAAGTaGACTTCGTGCTTGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSVLFCGFQISTIHFALDSSCRK*TSCLVG Trigger: CCCCACCAAGCACGAAGTTCACTTTCTGCACGAGGA...ATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR GCA 90 bp | AGTACATTAAGTTGCAGCACCAATACTGGGATACAGAACAAGAATAGTGAGCACCTCACTCTCAGCAGCTaGTTCAGCGGGGGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STLSCSTNTGIQNKNSEHLTLSS*FSGGWE Trigger: CTCCCAGCCCCCGCTGAAGCAGCTGCTGAGAGTGAG...GTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGTGCTGCAACTTAATGTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTGACATGGGCCACATaGCTTATGCTTGCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LETLELGNQVSYSVASRLVTWAT*LMLANA Trigger: GGCATTGGCAAGCATAAGCCATGTGGCCCATGTCAC...TAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCCCTGGAAGCAAGGTCTaGGTGAAATACATCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGPGSKV*VKYILE Trigger: CTCCAGGATGTATTTCACCCAGACCTTGCTTCCAGG...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACAGGCCCAGCAAGTCCTaGAAGCAAGGTCTGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LELGNQVSYSVASRLVPYRPSKS*KQGLGE Trigger: TTCACCCAGACCTTGCTTCCAGGACTTGCTGGGCCT...GTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTACCCGATGTCTCTTTCTaGAGCTTCCTGGACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LETLELGNQVSYSVASRLPDVSF*SFLDWK Trigger: CTTCCAGTCCAGGAAGCTCCAGAAAGAGACATCGGG...TAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| 3UTR CAA 72 bp | CCAAAGATGGAGCGAATGTTGTCCACGGTTGTGGCATaGGGCAGTGTTCTGACATCAGATACTGTCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PKMERMLSTVVA*GSVLTSDTVSP Trigger: AGGTGAGACAGTATCTGATGTCAGAACACTGCCCAATGCCACAACCGTGGACAACATTCGCTCCATCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135218.8 ENSMUST00000135695.2 |
||
| 3UTR CAA 72 bp | TCTCGACTAACCGCATTTCCAAAGATGGAGCGAATGTaGTCCACGGTTGTGGCATTGGGCAGTGTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SRLTAFPKMERM*STVVALGSVLT Trigger: TGTCAGAACACTGCCCAATGCCACAACCGTGGACAACATTCGCTCCATCTTTGGAAATGCGGTTAGTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
||
| 3UTR CAA 72 bp | TTGTATAGATCTGGCAGGTTGGCAAGCTGCAGGACATaGCCATCTTCTGTGAAATGCTTCGGAGGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYRSGRLASCRT*PSSVKCFGGRR Trigger: CCTCCTACCTCCGAAGCATTTCACAGAAGATGGCAATGTCCTGCAGCTTGCCAACCTGCCAGATCTATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCCCAGATCTTCCTTCCTaGTTCCAGTGCCATTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGPDLPS*FQCHCL Trigger: AAGACAATGGCACTGGAATCAGGAAGGAAGATCTGG...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR TCA 90 bp | GAGCGAATGTTGTCCACGGTTGTGGCATTGGGCAGTGTTCTGACATCAGATACTTTGCAGCTTTCCATCTaGGTAACTTGCTCTGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: ERMLSTVVALGSVLTSDTLQLSI*VTCSVR Trigger: GCGTACAGAGCAAGTTACTCAGATGGAAAGCTGCAA...AGTATCTGATGTCAGAACACTGCCCAATGCCACAACCGTGGACAACATTCGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTCACTAATCTCTTCCTaGAGACTCAAGACGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGSLISS*RLKTLV Trigger: CACCAGCGTCTTGAGTCTCCAGGAAGAGATTAGTGA...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAATAGATCTGGCAGGTTaGCAAGCTGCAGGACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LETLELGNQVSYSVASRLIDLAG*QAAGHC Trigger: GCAATGTCCTGCAGCTTGCCAACCTGCCAGATCTAT...TAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR GCA 90 bp | ACATTAAGTTGCAGCACCAATACTGGGATACAGAACAAGAATAGTGAGCACTGGCTTGGTCTGGTGCTGTaGCAAGGCCCACTGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLSCSTNTGIQNKNSEHWLGLVL*QGPLRI Trigger: AATCCTCAGTGGGCCTTGGCACAGCACCAGACCAAG...CCAGTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGTGCTGCAACTTAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAATCCACAGGTGAAGTACATTAAGTTGCAGCACCAATACTGGGATACACCGCATTTCCAAAGATaGAGCGAATGTTGTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AANPQVKYIKLQHQYWDTPHFQR*SECCPR Trigger: CCGTGGACAACATTCGCTCCATCTTTGGAAATGCGG...TGTATCCCAGTATTGGTGCTGCAACTTAATGTACTTCACCTGTGGATTGGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | ACATTAAGTTGCAGCACCAATACTGGGATACAGAACAAGAATAGTGAGCACTGGTCCAGGGCTTTGACGTaGAGCCAGGCATGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSCSTNTGIQNKNSEHWSRALT*SQACHS Trigger: AGAGTGACATGCCTGGCTCCACGTCAAAGCCCTGGA...CCAGTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGTGCTGCAACTTAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR TCA 90 bp | GAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATTGTCTTGGATCTaGATTAGCTTCAGGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ETLELGNQVSYSVASRLVPLSWI*ISFRPP Trigger: AGGTGGCCTGAAGCTAATTCAGATCCAAGACAATGG...TACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACTTGCAGCTTTCCATCTaGGTAACTTGCTCTGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: LELGNQVSYSVASRLVPYLQLSI*VTCSVR Trigger: GCGTACAGAGCAAGTTACTCAGATGGAAAGCTGCAA...GTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| 3UTR CAA 72 bp | TTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTaGGATGGTCATGCAGTCTCTACGGTGGCTATGATT | + |
|
Preference number: 4 (lower is better) Translates to: FCGFQISTIHFA*DGHAVSTVAMI Trigger: AATCATAGCCACCGTAGAGACTGCATGACCATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
||
| 3UTR CAA 72 bp | CAGAACAAGAATAGTGAGCACTGGAAACCCTGGAGCTaGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QNKNSEHWKPWS*ETKCPILWLPD Trigger: ATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTTGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
||
| 3UTR CAA 72 bp | ATGTTGAAGAGTCCTCACTGGGCAGGATGCTGTTTCTaGACCCAAGTAGAAGGAAGCACAGAGTCTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MLKSPHWAGCCF*TQVEGSTESLN Trigger: ATTCAGAGACTCTGTGCTTCCTTCTACTTGGGTCAAGAAACAGCATCCTGCCCAGTGAGGACTCTTCAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTACACAGAGAAATAGTCTaGAAGCATCTCCGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LETLELGNQVSYSVASRLHREIV*KHLRFL Trigger: AAGAAAGCGGAGATGCTTGCAGACTATTTCTCTGTG...TAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR GCA 90 bp | AAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGCCATCTTCTGTGAAATaGTTCGGAGGTAGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPSVLFCGFQISTIHFALPSSVK*FGGRRC Trigger: ACACCTCCTACCTCCGAAGCATTTCACAGAAGATGG...CAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
||
| CDS-3UTR CCA 90 bp | AACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCGTTGTAATAGTGACATaGGCCACATGGCTTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPGAWKPSVLFCGFQISTVVIVT*ATWLML Trigger: AAGCATAAGCCATGTGGCCCATGTCACTATTACAAC...GGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CCA 90 bp | ATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCCATATACAGTTTCAATaGCTTTTCTCAAGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: IVSTGNPGAWKPSVLFCGHIQFQ*LFSRQL Trigger: CAGCTGCCTTGAGAAAAGCCATTGAAACTGTATATG...GCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CCA 90 bp | CCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATACTGAGGTACAGGAATaGGTGTGTGTTTTTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PSVLFCGFQISTIHFALDTEVQE*VCVFGQ Trigger: TTGCCCAAAAACACACACCCATTCCTGTACCTCAGT...ATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| 3UTR CAA 72 bp | TCTAGAAATGTGTCTTCTGACTTCCACACGTGTTCCTaGTGTCCTGTGTCCTCTCTTGCTCCTTCTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SRNVSSDFHTCS*CPVSSLAPSLF Trigger: AAAGAGAGAAGGAGCAAGAGAGGACACAGGACACAAGGAACACGTGTGGAAGTCAGAAGACACATTTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135218.8 |
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| CDS-3UTR TCA 90 bp | AGTACATTAAGTTGCAGCACCAATACTGGGATACAGAACAAGAATAGTGAGCACGAAGCAAGGTCTGGGTaGAATACATCCTGGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: STLSCSTNTGIQNKNSEHEARSG*NTSWRN Trigger: ATTCCTCCAGGATGTATTTCACCCAGACCTTGCTTC...GTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGTGCTGCAACTTAATGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR TCA 90 bp | CTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTATGGCAAAATCATAAATaGGTATCTGGTAGAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LETLELGNQVSYSVASRLWQNHK*VSGRTA Trigger: AGCTGTTCTACCAGATACTCATTTATGATTTTGCCA...TAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR GCA 90 bp | CTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACAAATCCTCAAAAGTCTaGAGTTTACTCGTAGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: LELGNQVSYSVASRLVPYKSSKV*SLLVVN Trigger: GTTCACTACGAGTAAACTGCAGACTTTTGAGGATTT...GTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR GCA 90 bp | AACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCGTTTTTGGGCAAGTATaGTGCATATACAGTTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: NPGAWKPSVLFCGFQISTVFGQV*CIYSFN Trigger: ATTGAAACTGTATATGCAGCATACTTGCCCAAAAAC...GGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR GCA 90 bp | GGTTTTATCCTCACACCCAACTTCTATCAGTTCTCGACTAACCGCATTTCCAAAAAGTCTCCCCAGAGCTaGCAACAACTTCCAAAATTT | + |
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Preference number: 4 (lower is better) Translates to: GFILTPNFYQFSTNRISKKSPQS*QQLPKF Trigger: AAATTTTGGAAGTTGTTGGCAGCTCTGGGGAGACTT...TTTGGAAATGCGGTTAGTCGAGAACTGATAGAAGTTGGGTGTGAGGATAAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
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| CDS-3UTR CAA 90 bp | CACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATATCAGGGTGCCCTGGTaGCCTGCACAGGGTTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: HWKPWSLETKCPILWLPDIRVPW*PAQGLG Trigger: TCCTAAACCCTGTGCAGGCAACCAGGGCACCCTGAT...ATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS TCA 90 bp | TCTAAACAGTTTTCTATCATCTCTTTGATAGCATTGGCCGGCCGCTaGATGACTTCCCCCGCCGCTATGCGGTTCACTACCGTCTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: SKQFSIISLIALAGR*MTSPAAMRFTTVSS Trigger: GGACGAGACGGTAGTGAACCGCATAGCGGCGGGGGAAGTCATTCAGCGGCCGGCCAATGCTATCAAAGAGATGATAGAAAACTGTTTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | TCTATCAGTTCTCGACTAACCGCATTTCCAAAGATGGAGCGAATGTTGTCCACGATCAGGGTGCCCTGGTaGCCTGCACAGGGTTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: SISSRLTAFPKMERMLSTIRVPW*PAQGLG Trigger: TCCTAAACCCTGTGCAGGCAACCAGGGCACCCTGAT...CGTGGACAACATTCGCTCCATCTTTGGAAATGCGGTTAGTCGAGAACTGATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
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| CDS-3UTR CAA 90 bp | AACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCTACATCCTGGAGGAATaGGAGCCCAGCAGCTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: NPGAWKPSVLFCGFQISTYILEE*EPSSLL Trigger: GAGCAAGCTGCTGGGCTCCAATTCCTCCAGGATGTA...GGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | CTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACCCACATGGCTTATGCTaGCCAATGCCTCACCACGAA | + |
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Preference number: 5 (lower is better) Translates to: LELGNQVSYSVASRLVPYPHGLC*PMPHHE Trigger: TTCGTGGTGAGGCATTGGCAAGCATAAGCCATGTGG...GTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | TCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATGGTCATGCAGTCTAAGATGGAGCGAATGTaGTCCACGGTTGTGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: SVASRLVPYTSPWMVMQSKMERM*STVVAL Trigger: CAATGCCACAACCGTGGACAACATTCGCTCCATCTT...AGACTGCATGACCATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | GGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTGCAAGCTGCAGGACATaGCCATCTTCTGTGAAATGC | + |
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Preference number: 5 (lower is better) Translates to: GNQVSYSVASRLVPYTSPASCRT*PSSVKC Trigger: GCATTTCACAGAAGATGGCAATGTCCTGCAGCTTGC...AGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | AACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCCACCGCTCAAAGACTTaGTATAGATCTGGCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: NPGAWKPSVLFCGFQISTHRSKT*YRSGRL Trigger: CAACCTGCCAGATCTATACAAAGTCTTTGAGCGGTG...GGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | ACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTTTCCATCTGAGTAACTaGCTCTGTACGCACATTTCC | + |
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Preference number: 5 (lower is better) Translates to: TGNPGAWKPSVLFCGFQIFHLSN*LCTHIS Trigger: GGAAATGTGCGTACAGAGCAAGTTACTCAGATGGAA...AATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | AACAAGAATAGTGAGCACTGGAAACCCTGGAGCTTGGAAACCAAGTGTCCTATTTATAGATCTGGCAGGTaGGCAAGCTGCAGGACATTG | + |
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Preference number: 5 (lower is better) Translates to: NKNSEHWKPWSLETKCPIYRSGR*ASCRTL Trigger: CAATGTCCTGCAGCTTGCCAACCTGCCAGATCTATA...AATAGGACACTTGGTTTCCAAGCTCCAGGGTTTCCAGTGCTCACTATTCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS CCA 90 bp | GACGTCCACGTTCTGAGGGCTGATTTCCAAACTGAGGTACAGGAATaGGTGTGTGTTTTTGGGCAAGTATGCTGCATATACAGTTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: DVHVLRADFQTEVQE*VCVFGQVCCIYSFN Trigger: ATTGAAACTGTATATGCAGCATACTTGCCCAAAAACACACACCCATTCCTGTACCTCAGTTTGGAAATCAGCCCTCAGAACGTGGACGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000199404.2 |
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| CDS-3UTR CAA 90 bp | AGTACATTAAGTTGCAGCACCAATACTGGGATACAGAACAAGAATAGTGAGCACGAATGTTGTCCACGGTaGTGGCATTGGGCAGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: STLSCSTNTGIQNKNSEHECCPR*WHWAVF Trigger: GAACACTGCCCAATGCCACAACCGTGGACAACATTC...GTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGTGCTGCAACTTAATGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | GCTTGGAAACCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCTCTACCAGACGGTGGTaGATGAAGAGTAGGAAAATG | + |
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Preference number: 5 (lower is better) Translates to: AWKPSVLFCGFQISTIHFSTRRW*MKSRKM Trigger: CATTTTCCTACTCTTCATCAACCACCGTCTGGTAGA...GAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGGTTTCCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | TTTTTGGGCAAGTATGCTGCATATACAGTTTCAATGGCTTTTCTCAAGGCAGCTTTCCATCTGAGTAACTaGCTCTGTACGCACATTTCC | + |
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Preference number: 5 (lower is better) Translates to: FLGKYAAYTVSMAFLKAAFHLSN*LCTHIS Trigger: GGAAATGTGCGTACAGAGCAAGTTACTCAGATGGAA...AGCTGCCTTGAGAAAAGCCATTGAAACTGTATATGCAGCATACTTGCCCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135695.2 |
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| CDS-3UTR CAA 90 bp | CCAAGTGTCCTATTCTGTGGCTTCCAGATTAGTACCATACACTTCGCCTTGGATAAACTAATGCCTGAATaGTGTATTGAATACCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PSVLFCGFQISTIHFALDKLMPE*CIEYLP Trigger: TGGCAGGTATTCAATACACAATTCAGGCATTAGTTT...ATCCAAGGCGAAGTGTATGGTACTAATCTGGAAGCCACAGAATAGGACACTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS-3UTR CAA 90 bp | ACATTAAGTTGCAGCACCAATACTGGGATACAGAACAAGAATAGTGAGCACTGGTGCCTGAATTGTGTATaGAATACCTGCCAACAACTT | + |
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Preference number: 5 (lower is better) Translates to: TLSCSTNTGIQNKNSEHWCLNCV*NTCQQL Trigger: AAGTTGTTGGCAGGTATTCAATACACAATTCAGGCA...CCAGTGCTCACTATTCTTGTTCTGTATCCCAGTATTGGTGCTGCAACTTAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035079.10 |
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| CDS TCA 72 bp | TTTTCTATCATCTCTTTGATAGCATTGGCCGGCCGCTaGATGACTTCCCCCGCCGCTATGCGGTTCACTACC | + |
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Preference number: 6 (lower is better) Translates to: FSIISLIALAGR*MTSPAAMRFTT Trigger: GGTAGTGAACCGCATAGCGGCGGGGGAAGTCATTCAGCGGCCGGCCAATGCTATCAAAGAGATGATAGAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000135218.8 |
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| CDS CCA 72 bp | GTTCTGAGGGCTGATTTCCAAACTGAGGTACAGGAATaGGTGTGTGTTTTTGGGCAAGTATGCTGCATATAC | + |
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Preference number: 6 (lower is better) Translates to: VLRADFQTEVQE*VCVFGQVCCIY Trigger: GTATATGCAGCATACTTGCCCAAAAACACACACCCATTCCTGTACCTCAGTTTGGAAATCAGCCCTCAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035079.10 ENSMUST00000199404.2 |
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