Pregenerated sensors for MLF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030120Ensembl transcript IDs: ENSMUST00000032214.14, ENSMUST00000180095.4, ENSMUST00000203021.3, ENSMUST00000203133.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCGTAGAAGGCTCTCCCTaGGACCCAGGGAGAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: WSSNMRTQVSGYRMGGTRVEGSP*DPGRGG Trigger: CCCGCCTCTCCCTGGGTCTCAGGGAGAGCCTTCTAC...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAACTCAGCCGCTCAGCCTaGACCTGGAGGAAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RVRGAEGRRSLNPELSPKLSRSA*TWRKER Trigger: TCTTTCCTTCCTCCAGGTGCAGGCTGAGCGGCTGAG...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032214.14 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCCGCTCAGCCTGCACATaGGAAGCTGAGAGCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: WSSNMRTQVSGYRMGGTRRSACT*EAESLG Trigger: CCCCAGGCTCTCAGCTTCTCATGTGCAGGCTGAGCG...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180095.4 |
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| 3UTR TCA 72 bp | CAAAACCCTTCGATGCGTGGCAGGGGCTCGGGAAGATaGGGCGGCTTGGAGATGGAGCAGCAACATGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: QNPSMRGRGSGR*GGLEMEQQHEN Trigger: GTTCTCATGTTGCTGCTCCATCTCCAAGCCGCCTCATCTTCCCGAGCCCCTGCCACGCATCGAAGGGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| 3UTR TCA 72 bp | GGGAAGATGAGGCGGCTTGGAGATGGAGCAGCAACATaGGAACTCAAGTTAGTGGATACAGGATGGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GKMRRLGDGAAT*ELKLVDTGWVG Trigger: TCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCATCTCCAAGCCGCCTCATCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| 3UTR CCA 72 bp | GCAGAGAAGGGTAAAGGAAAGTGTTTCTGTGATGGGTaGGGGAAGGGACAAAGAATTGGAACTAGTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: AEKGKGKCFCDG*GKGQRIGTSPL Trigger: AAGTGGACTAGTTCCAATTCTTTGTCCCTTCCCCCACCCATCACAGAAACACTTTCCTTTACCCTTCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GCAAGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAGAGTCCTCAGGTCCCTaGATCGCCAGGCGGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ARVRGAEGRRSLNPELSPESSGP*IARRGG Trigger: GCCTCCCCGCCTGGCGATCCAGGGACCTGAGGACTC...TGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GCAAGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCACCTGCATCCTGCGGCTaGCAGGCCTGGTTGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARVRGAEGRRSLNPELSPPASCG*QAWLLA Trigger: TGCCAGCAACCAGGCCTGCCAGCCGCAGGATGCAGG...TGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GCAAGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCATGGTCCCCTGTGCGGTaGTTTCGGGAGCGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARVRGAEGRRSLNPELSPWSPVR*FRERWR Trigger: CCTCCAGCGCTCCCGAAACCACCGCACAGGGGACCA...TGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAAGAGACAGCCCCAGCCTaGATCCTGCGGCTGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RVRGAEGRRSLNPELSPKETAPA*ILRLAG Trigger: GCCTGCCAGCCGCAGGATGCAGGCTGGGGCTGTCTC...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAAGAGTCCTCAGGTCCCTaGATCGCCAGGCGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVRGAEGRRSLNPELSPKESSGP*IARRGG Trigger: GCCTCCCCGCCTGGCGATCCAGGGACCTGAGGACTC...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAATGGTCCCCTGTGCGGTaGTTTCGGGAGCGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVRGAEGRRSLNPELSPKWSPVR*FRERWR Trigger: CCTCCAGCGCTCCCGAAACCACCGCACAGGGGACCA...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAACCCTTCGATGCGTGGCAGCTTCCTGGTCCCCTGTaGGGTGGTTTCGGGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GRRSLNPELSPKPFDAWQLPGPL*GGFGSA Trigger: AGCGCTCCCGAAACCACCGCACAGGGGACCAGGAAG...CTGCCACGCATCGAAGGGTTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAACCCTTCGATGCGTGGCAGGAGGAGGAGAAGGTCTaGCAGTTGCCCCCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRSLNPELSPKPFDAWQEEEKV*QLPPAA Trigger: GGCTGCAGGGGGCAACTGCCAGACCTTCTCCTCCTC...CTGCCACGCATCGAAGGGTTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GCAAGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAGCTGGCAGGCCTGGTTaGTGGCATGTTACCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARVRGAEGRRSLNPELSPAGRPG*WHVTIC Trigger: ACAGATGGTAACATGCCAGCAACCAGGCCTGCCAGC...TGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCCCCCAGCCTGCATCCTaGGGCTGGCAGGCCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WSSNMRTQVSGYRMGGTRPQPAS*GWQAWL Trigger: CAACCAGGCCTGCCAGCCGCAGGATGCAGGCTGGGG...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGACAGTCATTTCAAGGATGGTTACTCAGCCGCTCAGCCTGCACCTGGAGCCTGCATCCTGCGGCTaGCAGGCCTGGTTGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERTVISRMVTQPLSLHLEPASCG*QAWLLA Trigger: TGCCAGCAACCAGGCCTGCCAGCCGCAGGATGCAGG...CTCCAGGTGCAGGCTGAGCGGCTGAGTAACCATCCTTGAAATGACTGTCCTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032214.14 |
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| CDS-3UTR CCA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAATCCTGCCGCTCTTCCTaGTCCCCTGTGCGGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVRGAEGRRSLNPELSPKSCRSS*SPVRWF Trigger: AAACCACCGCACAGGGGACCAGGAAGAGCGGCAGGA...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR TCA 90 bp | GCAAGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCATCCCAAACATGTCCATaGAACCGCCGGACATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARVRGAEGRRSLNPELSPSQTCP*NRRTFP Trigger: TGGGAATGTCCGGCGGTTTCATGGACATGTTTGGGA...TGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAACCCTTCGATGCGTGGCAGAGCCGCCTGACAACATaGGGCTCATGTGCTGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRSLNPELSPKPFDAWQSRLTT*GSCADG Trigger: ACCGTCAGCACATGAGCCGCATGTTGTCAGGCGGCT...CTGCCACGCATCGAAGGGTTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAATGCGGCTGGCAGGCCTaGTTGCTGGCATGTTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVRGAEGRRSLNPELSPKCGWQA*LLACYH Trigger: ATGGTAACATGCCAGCAACCAGGCCTGCCAGCCGCA...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | TTAGTGGATACAGGATGGGTGGGACACGCAGTGAGGGGTGAAGATGGAAACGTACTTCCTGGTCCCCTGTaGGGTGGTTTCGGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVDTGWVGHAVRGEDGNVLPGPL*GGFGSA Trigger: AGCGCTCCCGAAACCACCGCACAGGGGACCAGGAAG...TACGTTTCCATCTTCACCCCTCACTGCGTGTCCCACCCATCCTGTATCCACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAAGGTCCATCAGGAACATaGGATCCTCAGGCTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: RVRGAEGRRSLNPELSPKGPSGT*DPQAPR Trigger: ACGTGGAGCCTGAGGATCCCATGTTCCTGATGGACC...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCGAGGAGGAGAAGGTCTaGCAGTTGCCCCCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WSSNMRTQVSGYRMGGTREEEKV*QLPPAA Trigger: GGCTGCAGGGGGCAACTGCCAGACCTTCTCCTCCTC...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | TTAGTGGATACAGGATGGGTGGGACACGCAGTGAGGGGTGAAGATGGAAACGTACCCCCTGCAGCCATGTaGTCCATGTTCCCGATCATG | + |
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Preference number: 4 (lower is better) Translates to: LVDTGWVGHAVRGEDGNVPPAAM*SMFPIM Trigger: CATGATCGGGAACATGGAGCACATGGCTGCAGGGGG...TACGTTTCCATCTTCACCCCTCACTGCGTGTCCCACCCATCCTGTATCCACTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAACCCTTCGATGCGTGGCAGTGCCCAATGGACATCTaGTCTAGACCACTGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GRRSLNPELSPKPFDAWQCPMDI*SRPLSE Trigger: CTCAGACAGTGGTCTAGAGCAGATGTCCATTGGGCA...CTGCCACGCATCGAAGGGTTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GAATTGGAACTAGTCCACTTTCTCCACAGCCCTTATAGGACCATGGCACCTGCATCCTGCCGCTCTTCCTaGTCCCCTGTGCGGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: ELELVHFLHSPYRTMAPASCRSS*SPVRWF Trigger: AAACCACCGCACAGGGGACCAGGAAGAGCGGCAGGA...TGCAGGTGCCATGGTCCTATAAGGGCTGTGGAGAAAGTGGACTAGTTCCAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR TCA 90 bp | GATACAGGATGGGTGGGACACGCAGTGAGGGGTGAAGATGGAAACGTAGGTAAGATATCCAAAGCCGCCTaGCAACATGCGGCTCATGTG | + |
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Preference number: 4 (lower is better) Translates to: DTGWVGHAVRGEDGNVGKISKAA*QHAAHV Trigger: CACATGAGCCGCATGTTGTCAGGCGGCTTTGGATAT...CTTACCTACGTTTCCATCTTCACCCCTCACTGCGTGTCCCACCCATCCTGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR TCA 90 bp | TTAGTGGATACAGGATGGGTGGGACACGCAGTGAGGGGTGAAGATGGAAACGTAGCCCTATCCCGAATGTaGTGCCCAATGGACATCTGC | + |
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Preference number: 4 (lower is better) Translates to: LVDTGWVGHAVRGEDGNVALSRM*CPMDIC Trigger: GCAGATGTCCATTGGGCATCACATTCGGGATAGGGC...TACGTTTCCATCTTCACCCCTCACTGCGTGTCCCACCCATCCTGTATCCACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GCAAGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCACCATTCATCATCAAATaGTGCTGCCTCACTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ARVRGAEGRRSLNPELSPPFIIK*CCLTFI Trigger: GATGAAAGTGAGGCAGCAGCATTTGATGATGAATGG...TGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GATACAGGATGGGTGGGACACGCAGTGAGGGGTGAAGATGGAAACGTAGGTAAGGGCAGGCCTGGTTGCTaGCATGTTACCATCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: DTGWVGHAVRGEDGNVGKGRPGC*HVTICD Trigger: ATCACAGATGGTAACATGCCAGCAACCAGGCCTGCC...CTTACCTACGTTTCCATCTTCACCCCTCACTGCGTGTCCCACCCATCCTGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GAATTGGAACTAGTCCACTTTCTCCACAGCCCTTATAGGACCATGGCACCTGCAGCTGGCAGGCCTGGTTaGTGGCATGTTACCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: ELELVHFLHSPYRTMAPAAGRPG*WHVTIC Trigger: ACAGATGGTAACATGCCAGCAACCAGGCCTGCCAGC...TGCAGGTGCCATGGTCCTATAAGGGCTGTGGAGAAAGTGGACTAGTTCCAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GCTTGGAGATGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTCCCCCTGCAGCCATGTaGTCCATGTTCCCGATCATG | + |
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Preference number: 4 (lower is better) Translates to: AWRWSSNMRTQVSGYRMGPPAAM*SMFPIM Trigger: CATGATCGGGAACATGGAGCACATGGCTGCAGGGGG...ACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCATCTCCAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR TCA 90 bp | TTAGTGGATACAGGATGGGTGGGACACGCAGTGAGGGGTGAAGATGGAAACGTAGCATGTTACCATCTGTaGTGCTCAGGAAGGGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: LVDTGWVGHAVRGEDGNVACYHL*CSGRGY Trigger: ATAGCCCCTTCCTGAGCATCACAGATGGTAACATGC...TACGTTTCCATCTTCACCCCTCACTGCGTGTCCCACCCATCCTGTATCCACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCTGCCCAATGGACATCTaGTCTAGACCACTGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: WSSNMRTQVSGYRMGGTRCPMDI*SRPLSE Trigger: CTCAGACAGTGGTCTAGAGCAGATGTCCATTGGGCA...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAACCATTCATCATCAAATaGTGCTGCCTCACTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: RVRGAEGRRSLNPELSPKPFIIK*CCLTFI Trigger: GATGAAAGTGAGGCAGCAGCATTTGATGATGAATGG...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GCTTGGAGATGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGTCCATCAGGAACATaGGATCCTCAGGCTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: AWRWSSNMRTQVSGYRMGGPSGT*DPQAPR Trigger: ACGTGGAGCCTGAGGATCCCATGTTCCTGATGGACC...ACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCATCTCCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GAATTGGAACTAGTCCACTTTCTCCACAGCCCTTATAGGACCATGGCACCTGCAGGCAGGCCTGGTTGCTaGCATGTTACCATCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: ELELVHFLHSPYRTMAPAGRPGC*HVTICD Trigger: ATCACAGATGGTAACATGCCAGCAACCAGGCCTGCC...TGCAGGTGCCATGGTCCTATAAGGGCTGTGGAGAAAGTGGACTAGTTCCAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | GATACAGGATGGGTGGGACACGCAGTGAGGGGTGAAGATGGAAACGTAGGTAAGGAATGTGATGCCCAATaGACATCTGCTCTAGACCAC | + |
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Preference number: 4 (lower is better) Translates to: DTGWVGHAVRGEDGNVGKECDAQ*TSALDH Trigger: GTGGTCTAGAGCAGATGTCCATTGGGCATCACATTC...CTTACCTACGTTTCCATCTTCACCCCTCACTGCGTGTCCCACCCATCCTGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR TCA 90 bp | GCTTGGAGATGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTATATCCAAAGCCGCCTaGCAACATGCGGCTCATGTG | + |
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Preference number: 4 (lower is better) Translates to: AWRWSSNMRTQVSGYRMGISKAA*QHAAHV Trigger: CACATGAGCCGCATGTTGTCAGGCGGCTTTGGATAT...ACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCATCTCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CCA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCGAATGTGATGCCCAATaGACATCTGCTCTAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WSSNMRTQVSGYRMGGTRECDAQ*TSALDH Trigger: GTGGTCTAGAGCAGATGTCCATTGGGCATCACATTC...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR TCA 90 bp | GCTTGGAGATGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGCATGTTACCATCTGTaGTGCTCAGGAAGGGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AWRWSSNMRTQVSGYRMGACYHL*CSGRGY Trigger: ATAGCCCCTTCCTGAGCATCACAGATGGTAACATGC...ACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCATCTCCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR TCA 90 bp | GCTTGGAGATGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTCACTTTCATCCAGGTTaGTGTAGTCCTGCCGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: AWRWSSNMRTQVSGYRMGHFHPG*CSPAAL Trigger: AAGAGCGGCAGGACTACATCAACCTGGATGAAAGTG...ACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCATCTCCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GAAAGGACAGTCATTTCAAGGATGGTTACTCAGCCGCTCAGCCTGCACCTGGAGATCATCAAATGCTGCTaGCTCACTTTCATCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: ERTVISRMVTQPLSLHLEIIKCC*LTFIQV Trigger: AACCTGGATGAAAGTGAGGCAGCAGCATTTGATGAT...CTCCAGGTGCAGGCTGAGCGGCTGAGTAACCATCCTTGAAATGACTGTCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032214.14 |
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| CDS-3UTR GCA 90 bp | TTAGTGGATACAGGATGGGTGGGACACGCAGTGAGGGGTGAAGATGGAAACGTAATCATCAAATGCTGCTaGCTCACTTTCATCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LVDTGWVGHAVRGEDGNVIIKCC*LTFIQV Trigger: AACCTGGATGAAAGTGAGGCAGCAGCATTTGATGAT...TACGTTTCCATCTTCACCCCTCACTGCGTGTCCCACCCATCCTGTATCCACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCTTCATCATCAAATGCTaGTGCCTCACTTTCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: WSSNMRTQVSGYRMGGTRFIIKC*CLTFIQ Trigger: CTGGATGAAAGTGAGGCAGCAGCATTTGATGATGAA...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR GCA 90 bp | GCTTGGAGATGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTTTCATCATCAAATGCTaGTGCCTCACTTTCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: AWRWSSNMRTQVSGYRMGFIIKC*CLTFIQ Trigger: CTGGATGAAAGTGAGGCAGCAGCATTTGATGATGAA...ACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCATCTCCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CAA 90 bp | GCAAGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAGGCTGGCAGGCCTGGTaGCTGGCATGTTACCATCTG | + |
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Preference number: 5 (lower is better) Translates to: ARVRGAEGRRSLNPELSPGWQAW*LACYHL Trigger: CAGATGGTAACATGCCAGCAACCAGGCCTGCCAGCC...TGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS CCA 90 bp | GGGAGCGCTGGAGGATGTGAGCCCTATCCCGAATGTGATGCCCAATaGACATCTGCTCTAGACCACTGTCTGAGTCCCGGACAGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GSAGGCEPYPECDAQ*TSALDHCLSPGQSS Trigger: GGAGGACTGTCCGGGACTCAGACAGTGGTCTAGAGCAGATGTCCATTGGGCATCACATTCGGGATAGGGCTCACATCCTCCAGCGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CAA 90 bp | AGGGTCAGGGGAGCTGAGGGACGGAGATCCCTAAACCCAGAGCTTTCCCCAAAATGTGCTGACGGTGAATaGCGAAGGGGTCCATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RVRGAEGRRSLNPELSPKCADGE*RRGPSG Trigger: TCCTGATGGACCCCTTCGCAATTCACCGTCAGCACA...TTTTGGGGAAAGCTCTGGGTTTAGGGATCTCCGTCCCTCAGCTCCCCTGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CAA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCGAGAAGGTCTGGCAGTaGCCCCCTGCAGCCATGTGC | + |
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Preference number: 5 (lower is better) Translates to: WSSNMRTQVSGYRMGGTREKVWQ*PPAAMC Trigger: GCACATGGCTGCAGGGGGCAACTGCCAGACCTTCTC...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CAA 90 bp | TGGAGCAGCAACATGAGAACTCAAGTTAGTGGATACAGGATGGGTGGGACACGCGGCTGGCAGGCCTGGTaGCTGGCATGTTACCATCTG | + |
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Preference number: 5 (lower is better) Translates to: WSSNMRTQVSGYRMGGTRGWQAW*LACYHL Trigger: CAGATGGTAACATGCCAGCAACCAGGCCTGCCAGCC...GCGTGTCCCACCCATCCTGTATCCACTAACTTGAGTTCTCATGTTGCTGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS-3UTR CAA 90 bp | GAATTGGAACTAGTCCACTTTCTCCACAGCCCTTATAGGACCATGGCACCTGCATGTGCTGACGGTGAATaGCGAAGGGGTCCATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: ELELVHFLHSPYRTMAPACADGE*RRGPSG Trigger: TCCTGATGGACCCCTTCGCAATTCACCGTCAGCACA...TGCAGGTGCCATGGTCCTATAAGGGCTGTGGAGAAAGTGGACTAGTTCCAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS GCA 90 bp | TCTGTATCGGGATGTCTCCCTTCTCCATTCATCATCAAATGCTGCTaGCTCACTTTCATCCAGGTTGATGTAGTCCTGCCGCTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SVSGCLPSPFIIKCC*LTFIQVDVVLPLFL Trigger: CAGGAAGAGCGGCAGGACTACATCAACCTGGATGAAAGTGAGGCAGCAGCATTTGATGATGAATGGAGAAGGGAGACATCCCGATACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS GCA 90 bp | CTGTCTGTATCGGGATGTCTCCCTTCTCCATTCATCATCAAATGCTaGTGCCTCACTTTCATCCAGGTTGATGTAGTCCTGCCGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LSVSGCLPSPFIIKC*CLTFIQVDVVLPLF Trigger: GAAGAGCGGCAGGACTACATCAACCTGGATGAAAGTGAGGCAGCAGCATTTGATGATGAATGGAGAAGGGAGACATCCCGATACAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS GCA 72 bp | AGCCCCAGCCTGCATCCTGCGGCTGGCAGGCCTGGTTaGTGGCATGTTACCATCTGTGATGCTCAGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPSLHPAAGRPG*WHVTICDAQEG Trigger: CCCTTCCTGAGCATCACAGATGGTAACATGCCAGCAACCAGGCCTGCCAGCCGCAGGATGCAGGCTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 ENSMUST00000203021.3 ENSMUST00000203133.2 |
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| CDS CCA 72 bp | CCCAGCCTGCATCCTGCGGCTGGCAGGCCTGGTTGCTaGCATGTTACCATCTGTGATGCTCAGGAAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PSLHPAAGRPGC*HVTICDAQEGA Trigger: AGCCCCTTCCTGAGCATCACAGATGGTAACATGCCAGCAACCAGGCCTGCCAGCCGCAGGATGCAGGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 ENSMUST00000203021.3 ENSMUST00000203133.2 |
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| CDS GCA 72 bp | AACAGTGGAGGAGGAGAAGGTCTGGCAGTTGCCCCCTaGAGCCATGTGCTCCATGTTCCCGATCATGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: NSGGGEGLAVAP*SHVLHVPDHVV Trigger: AACGACATGATCGGGAACATGGAGCACATGGCTGCAGGGGGCAACTGCCAGACCTTCTCCTCCTCCACTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 ENSMUST00000203021.3 ENSMUST00000203133.2 |
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| CDS CAA 72 bp | CGCCTGACAACATGCGGCTCATGTGCTGACGGTGAATaGCGAAGGGGTCCATCAGGAACATGGGATCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RLTTCGSCADGE*RRGPSGTWDPQ Trigger: CTGAGGATCCCATGTTCCTGATGGACCCCTTCGCAATTCACCGTCAGCACATGAGCCGCATGTTGTCAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 ENSMUST00000203133.2 |
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| CDS CCA 72 bp | GGAGGATGTGAGCCCTATCCCGAATGTGATGCCCAATaGACATCTGCTCTAGACCACTGTCTGAGTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GGCEPYPECDAQ*TSALDHCLSPG Trigger: TCCGGGACTCAGACAGTGGTCTAGAGCAGATGTCCATTGGGCATCACATTCGGGATAGGGCTCACATCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 |
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| CDS TCA 72 bp | TGTGATGCTCAGGAAGGGGCTATATCCAAAGCCGCCTaGCAACATGCGGCTCATGTGCTGACGGTGAATTGC | + |
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Preference number: 6 (lower is better) Translates to: CDAQEGAISKAA*QHAAHVLTVNC Trigger: GCAATTCACCGTCAGCACATGAGCCGCATGTTGTCAGGCGGCTTTGGATATAGCCCCTTCCTGAGCATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032214.14 ENSMUST00000180095.4 ENSMUST00000203133.2 |
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