Pregenerated sensors for MLC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035805Ensembl transcript IDs: ENSMUST00000042594.13, ENSMUST00000109368.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAGACAGGACCGGAAGTCCCCGACACTGGAGGCGGGGCCACTTTaGTCCTACATGATCCCTGTCAGGTGCCATCCTTGCATCCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: WRQDRKSPTLEAGPL*SYMIPVRCHPCIPL Trigger: CAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGAGCAAAGTGGCCCCGCCTCCAGTGTCGGGGACTTCCGGTCCTGTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CCA 90 bp | TTGATTCTCTGGTTAGCTGGGAGAGTCCAGCTGTCTTCTGGGGCCTaGGGAGGTGATATACAAACTATCTGTGAGTCTCACAGCCAAACT | + |
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Preference number: 1 (lower is better) Translates to: LILWLAGRVQLSSGA*GGDIQTICESHSQT Trigger: AGTTTGGCTGTGAGACTCACAGATAGTTTGTATATCACCTCCCCAGGCCCCAGAAGACAGCTGGACTCTCCCAGCTAACCAGAGAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTGGGACCACCACTCCCTTCCCACCCAATAGCGTGTGGTATATAGAGCTGCCAGGTCCTGGTGAATaGGGGTCAACCCAGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: PSGTTTPFPPNSVWYIELPGPGE*GSTQEV Trigger: CACTTCCTGGGTTGACCCTCATTCACCAGGACCTGG...CAGCTCTATATACCACACGCTATTGGGTGGGAAGGGAGTGGTGGTCCCACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTAGAAGGATTTTCACTCTCTCCCTGACCCTGGCAGCTCTTCTGAGGCACCCTTGCAGCCTGGGCTaGCCTCACAGGAGGGAAATA | + |
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Preference number: 2 (lower is better) Translates to: LPRRIFTLSLTLAALLRHPCSLG*PHRREI Trigger: TATTTCCCTCCTGTGAGGGCAGCCCAGGCTGCAAGG...GTGCCTCAGAAGAGCTGCCAGGGTCAGGGAGAGAGTGAAAATCCTTCTAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CCA 90 bp | CTATCTGTGAGTCTCACAGCCAAACTATCCCTGCACTGTGGCAAGCATGAGAAGAGCCACCTTGCAGCCTaGGCTGCCCTCACAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSVSLTAKLSLHCGKHEKSHLAA*AALTGG Trigger: CCCTCCTGTGAGGGCAGCCCAGGCTGCAAGGTGGCT...CTTCTCATGCTTGCCACAGTGCAGGGATAGTTTGGCTGTGAGACTCACAGATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATAGCCACCTTGCAGCCTaGGCTGCCCTCACAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GSSSEAQNIPLPGREPIDSHLAA*AALTGG Trigger: CCCTCCTGTGAGGGCAGCCCAGGCTGCAAGGTGGCT...ATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGCTGGCAGCAATCCTCTTGCCGCCTCATTCTGGTCCTGAAAGCCCAGGTCCCTGGCAGCTCTTCTaGGGCACAGAATATACCTCT | + |
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Preference number: 2 (lower is better) Translates to: CKLAAILLPPHSGPESPGPWQLF*GTEYTS Trigger: AGAGGTATATTCTGTGCCTCAGAAGAGCTGCCAGGG...ACCTGGGCTTTCAGGACCAGAATGAGGCGGCAAGAGGATTGCTGCCAGCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTGGGACCACCACTCCCTTCCCACCCAATAGCGTGTGGTATATAGAGCTGTGGAAGGGAACCCATTaGTACCCCAGCTCAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: PSGTTTPFPPNSVWYIELWKGTH*YPSSVK Trigger: CTTTACTGAGCTGGGGTATCAATGGGTTCCCTTCCA...CAGCTCTATATACCACACGCTATTGGGTGGGAAGGGAGTGGTGGTCCCACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGCCCATTGGGCTCCGCACATAGGCAAGCAAAAATGATCTCTCATTTAGGGACCGAAAAGCCACCTTaGAGCCTGGGCTGCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: PSPLGSAHRQAKMISHLGTEKPP*SLGCPH Trigger: GTGAGGGCAGCCCAGGCTGCAAGGTGGCTTTTCGGT...CCCTAAATGAGAGATCATTTTTGCTTGCCTATGTGCGGAGCCCAATGGGCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTGGGACCACCACTCCCTTCCCACCCAATAGCGTGTGGTATATAGAGCTGCAGCCAAACTATCCCTaGACTGTGGCAAGCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: PSGTTTPFPPNSVWYIELQPNYP*TVASMR Trigger: TCTCATGCTTGCCACAGTGCAGGGATAGTTTGGCTG...CAGCTCTATATACCACACGCTATTGGGTGGGAAGGGAGTGGTGGTCCCACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGCTGGCAGCAATCCTCTTGCCGCCTCATTCTGGTCCTGAAAGCCCAGGTCAGCCAAACTATCCCTaGACTGTGGCAAGCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: CKLAAILLPPHSGPESPGQPNYP*TVASMR Trigger: TCTCATGCTTGCCACAGTGCAGGGATAGTTTGGCTG...ACCTGGGCTTTCAGGACCAGAATGAGGCGGCAAGAGGATTGCTGCCAGCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAAGCTGGCAGCAATCCTCTTGCCGCCTCATTCTGGTCCTGAAAGCCCAGGATTCTCTGGTTAGCTaGGAGAGTCCAGCTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SASWQQSSCRLILVLKAQDSLVS*ESPAVF Trigger: GAAGACAGCTGGACTCTCCCAGCTAACCAGAGAATC...CTGGGCTTTCAGGACCAGAATGAGGCGGCAAGAGGATTGCTGCCAGCTTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATACCACCGAAAAGCCACCTTaGAGCCTGGGCTGCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSSEAQNIPLPGREPIDTTEKPP*SLGCPH Trigger: GTGAGGGCAGCCCAGGCTGCAAGGTGGCTTTTCGGT...GGTATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATACCCCAGGTCCTGGTGAATaGGGGTCAACCCAGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SSSEAQNIPLPGREPIDTPGPGE*GSTQEV Trigger: CACTTCCTGGGTTGACCCTCATTCACCAGGACCTGG...GGTATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAAGCTGGCAGCAATCCTCTTGCCGCCTCATTCTGGTCCTGAAAGCCCAGAAGCAATTCCTAAAATaGTCCCCAGCTTCACAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SASWQQSSCRLILVLKAQKQFLK*SPASQR Trigger: CCTTTGTGAAGCTGGGGATCATTTTAGGAATTGCTT...CTGGGCTTTCAGGACCAGAATGAGGCGGCAAGAGGATTGCTGCCAGCTTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAGCAAAAATGATCTCTCATTTAGGGCAGGCTGCAGAGAATGGAGACAGGCACTTTGCTCCTACATaGTCCCTGTCAGGTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: RQAKMISHLGQAAENGDRHFAPT*SLSGAI Trigger: GATGGCACCTGACAGGGATCATGTAGGAGCAAAGTG...CCTGTCTCCATTCTCTGCAGCCTGCCCTAAATGAGAGATCATTTTTGCTTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGCAAGCTGGCAGCAATCCTCTTGCCGCCTCATTCTGGTCCTGAAAGCCCAGTATCTACAAGTGAGCTaGCTAGAAGGATTTTCACTC | + |
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Preference number: 2 (lower is better) Translates to: SASWQQSSCRLILVLKAQYLQVS*LEGFSL Trigger: GAGTGAAAATCCTTCTAGGCAGCTCACTTGTAGATA...CTGGGCTTTCAGGACCAGAATGAGGCGGCAAGAGGATTGCTGCCAGCTTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCCCATTGGGCTCCGCACATAGGCAAGCAAAAATGATCTCTCATTTAGGGCTGTCTTCTGGGGCCTaGGGAGGTGATATACAAACT | + |
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Preference number: 2 (lower is better) Translates to: PSPLGSAHRQAKMISHLGLSSGA*GGDIQT Trigger: AGTTTGTATATCACCTCCCCAGGCCCCAGAAGACAG...CCCTAAATGAGAGATCATTTTTGCTTGCCTATGTGCGGAGCCCAATGGGCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATACCCTGTCTTCTGGGGCCTaGGGAGGTGATATACAAACT | + |
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Preference number: 2 (lower is better) Translates to: SSSEAQNIPLPGREPIDTLSSGA*GGDIQT Trigger: AGTTTGTATATCACCTCCCCAGGCCCCAGAAGACAG...GGTATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTAGAAGGATTTTCACTCTCTCCCTGACCCTGGCAGCTCTTCTGAGGCACTATACAAACTATCTGTaGGTCTCACAGCCAAACTAT | + |
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Preference number: 2 (lower is better) Translates to: LPRRIFTLSLTLAALLRHYTNYL*VSQPNY Trigger: ATAGTTTGGCTGTGAGACTCACAGATAGTTTGTATA...GTGCCTCAGAAGAGCTGCCAGGGTCAGGGAGAGAGTGAAAATCCTTCTAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTACATGATCCCTGTCAGGTGCCATCCTTGCATCCCTCTGTTTGAAAATGGCTATACAAACTATCTGTaGGTCTCACAGCCAAACTAT | + |
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Preference number: 2 (lower is better) Translates to: SYMIPVRCHPCIPLFENGYTNYL*VSQPNY Trigger: ATAGTTTGGCTGTGAGACTCACAGATAGTTTGTATA...GCCATTTTCAAACAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAGCAAAAATGATCTCTCATTTAGGGCAGGCTGCAGAGAATGGAGACAGGTATCTACAAGTGAGCTaGCTAGAAGGATTTTCACTC | + |
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Preference number: 2 (lower is better) Translates to: RQAKMISHLGQAAENGDRYLQVS*LEGFSL Trigger: GAGTGAAAATCCTTCTAGGCAGCTCACTTGTAGATA...CCTGTCTCCATTCTCTGCAGCCTGCCCTAAATGAGAGATCATTTTTGCTTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR GCA 72 bp | GACCGGAAGTCCCCGACACTGGAGGCGGGGCCACTTTaGTCCTACATGATCCCTGTCAGGTGCCATCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: DRKSPTLEAGPL*SYMIPVRCHPC Trigger: GCAAGGATGGCACCTGACAGGGATCATGTAGGAGCAAAGTGGCCCCGCCTCCAGTGTCGGGGACTTCCGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CCA 72 bp | AAAGCAGTAGCCGTGCAATGGTTAGAGTCCGTACGGTaGAGCACGCTGGGGTCCGGGCAGACACCCAGACTC | + |
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Preference number: 3 (lower is better) Translates to: KAVAVQWLESVR*STLGSGQTPRL Trigger: GAGTCTGGGTGTCTGCCCGGACCCCAGCGTGCTCCACCGTACGGACTCTAACCATTGCACGGCTACTGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CCA 72 bp | AGTGGGACCACCACTCCCTTCCCACCCAATAGCGTGTaGTATATAGAGCTGCAGAGGACCCCAAGCCCATTG | + |
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Preference number: 3 (lower is better) Translates to: SGTTTPFPPNSV*YIELQRTPSPL Trigger: CAATGGGCTTGGGGTCCTCTGCAGCTCTATATACCACACGCTATTGGGTGGGAAGGGAGTGGTGGTCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTACATGATCCCTGTCAGGTGCCATCCTTGCATCCCTCTGTTTGAAAATGGCAACCGAAAAGCCACCTaGCAGCCTGGGCTGCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SYMIPVRCHPCIPLFENGNRKAT*QPGLPS Trigger: TGAGGGCAGCCCAGGCTGCAAGGTGGCTTTTCGGTT...GCCATTTTCAAACAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CCA 72 bp | AAACTATCCCTGCACTGTGGCAAGCATGAGAAGGCATaGAAGTGCCCTAAGGCCAGAACACCAGGTCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: KLSLHCGKHEKA*KCPKARTPGPG Trigger: ACCAGGACCTGGTGTTCTGGCCTTAGGGCACTTCCATGCCTTCTCATGCTTGCCACAGTGCAGGGATAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CCA 72 bp | AAAAATGATCTCTCATTTAGGGCAGGCTGCAGAGAATaGAGACAGGACCGGAAGTCCCCGACACTGGAGGCG | + |
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Preference number: 3 (lower is better) Translates to: KNDLSFRAGCRE*RQDRKSPTLEA Trigger: CGCCTCCAGTGTCGGGGACTTCCGGTCCTGTCTCCATTCTCTGCAGCCTGCCCTAAATGAGAGATCATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTCCTACATGATCCCTGTCAGGTGCCATCCTTGCATCCCTCTGTTTGAAAATAACCGAAAAGCCACCTaGCAGCCTGGGCTGCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: CSYMIPVRCHPCIPLFENNRKAT*QPGLPS Trigger: TGAGGGCAGCCCAGGCTGCAAGGTGGCTTTTCGGTT...ATTTTCAAACAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAAGCTGGCAGCAATCCTCTTGCCGCCTCATTCTGGTCCTGAAAGCCCAGGTCTTGCATCCCTCTGTTaGAAAATGGCCACGCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: CKLAAILLPPHSGPESPGLASLC*KMATLF Trigger: GAAAAGCGTGGCCATTTTCAAACAGAGGGATGCAAG...ACCTGGGCTTTCAGGACCAGAATGAGGCGGCAAGAGGATTGCTGCCAGCTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR TCA 72 bp | GGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTaGTACCCCAGCTCAGTAAAGGCACGCTCGCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: GTEYTSSWKGTH*YPSSVKARSLS Trigger: AGACAGCGAGCGTGCCTTTACTGAGCTGGGGTATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CCA 72 bp | TGGTTAGCTGGGAGAGTCCAGCTGTCTTCTGGGGCCTaGGGAGGTGATATACAAACTATCTGTGAGTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: WLAGRVQLSSGA*GGDIQTICESH Trigger: GTGAGACTCACAGATAGTTTGTATATCACCTCCCCAGGCCCCAGAAGACAGCTGGACTCTCCCAGCTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CCA 72 bp | CAAAGGACCCAACTTACTATAGGTTCCTTGATTCTCTaGTTAGCTGGGAGAGTCCAGCTGTCTTCTGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: QRTQLTIGSLIL*LAGRVQLSSGA Trigger: GGCCCCAGAAGACAGCTGGACTCTCCCAGCTAACCAGAGAATCAAGGAACCTATAGTAAGTTGGGTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR GCA 72 bp | CTTTGCTCCTACATGATCCCTGTCAGGTGCCATCCTTaGATCCCTCTGTTTGAAAATGGCCACGCTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LCSYMIPVRCHP*IPLFENGHAFP Trigger: AGGAAAAGCGTGGCCATTTTCAAACAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGAGCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR-3UTR CAA 90 bp | CCAAGCCCATTGGGCTCCGCACATAGGCAAGCAAAAATGATCTCTCATTTAGGGCTTACTATAGGTTCCTaGATTCTCTGGTTAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: PSPLGSAHRQAKMISHLGLTIGS*ILWLAG Trigger: CCCAGCTAACCAGAGAATCAAGGAACCTATAGTAAG...CCCTAAATGAGAGATCATTTTTGCTTGCCTATGTGCGGAGCCCAATGGGCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR GCA 90 bp | AGAGTCCGTACGGTGGAGCACGCTGGGGTCCGGGCAGACACCCAGACTCAGTCTCTGGGGGTCCCAGGATaGAGCCTGCAGCCGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: RVRTVEHAGVRADTQTQSLGVPG*SLQPGA Trigger: AGCGCCCGGCTGCAGGCTGCATCCTGGGACCCCCAG...AGACTGAGTCTGGGTGTCTGCCCGGACCCCAGCGTGCTCCACCGTACGGACTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR GCA 90 bp | CCCAGTGGGACCACCACTCCCTTCCCACCCAATAGCGTGTGGTATATAGAGCTGCTGGGGGTCCCAGGATaGAGCCTGCAGCCGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PSGTTTPFPPNSVWYIELLGVPG*SLQPGA Trigger: AGCGCCCGGCTGCAGGCTGCATCCTGGGACCCCCAG...CAGCTCTATATACCACACGCTATTGGGTGGGAAGGGAGTGGTGGTCCCACTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR GCA 90 bp | AGTGCCCTAAGGCCAGAACACCAGGTCCTGGTGAATGAGGGTCAACCCAGGAAGTCGGACCACCTCCCCTaGTGGCCGCTCCTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: SALRPEHQVLVNEGQPRKSDHLP*WPLLGT Trigger: TGTCCCCAGGAGCGGCCAGCAGGGGAGGTGGTCCGA...CTTCCTGGGTTGACCCTCATTCACCAGGACCTGGTGTTCTGGCCTTAGGGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CAA 72 bp | GGACCGGAAGTCCCCGACACTGGAGGCGGGGCCACTTaGCTCCTACATGATCCCTGTCAGGTGCCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GPEVPDTGGGAT*LLHDPCQVPSL Trigger: CAAGGATGGCACCTGACAGGGATCATGTAGGAGCAAAGTGGCCCCGCCTCCAGTGTCGGGGACTTCCGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| 3UTR CAA 72 bp | CTGGTCCTGAAAGCCCAGGTCCTGAAAGCGGATGGCTaGTCAGCCCAGTGGGACCACCACTCCCTTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LVLKAQVLKADG*SAQWDHHSLPT Trigger: GGTGGGAAGGGAGTGGTGGTCCCACTGGGCTGACAAGCCATCCGCTTTCAGGACCTGGGCTTTCAGGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR GCA 90 bp | AAGCATGAGAAGGCATGGAAGTGCCCTAAGGCCAGAACACCAGGTCCTGGTGAATCGGACCACCTCCCCTaGTGGCCGCTCCTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: KHEKAWKCPKARTPGPGESDHLP*WPLLGT Trigger: TGTCCCCAGGAGCGGCCAGCAGGGGAGGTGGTCCGA...TTCACCAGGACCTGGTGTTCTGGCCTTAGGGCACTTCCATGCCTTCTCATGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR CCA 90 bp | AAGCATGAGAAGGCATGGAAGTGCCCTAAGGCCAGAACACCAGGTCCTGGTGAAGACCACCTCCCCTGCTaGCCGCTCCTGGGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: KHEKAWKCPKARTPGPGEDHLPC*PLLGTG Trigger: TCCTGTCCCCAGGAGCGGCCAGCAGGGGAGGTGGTC...TTCACCAGGACCTGGTGTTCTGGCCTTAGGGCACTTCCATGCCTTCTCATGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR CCA 90 bp | CTATCTGTGAGTCTCACAGCCAAACTATCCCTGCACTGTGGCAAGCATGAGAAGGACCACCTCCCCTGCTaGCCGCTCCTGGGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSVSLTAKLSLHCGKHEKDHLPC*PLLGTG Trigger: TCCTGTCCCCAGGAGCGGCCAGCAGGGGAGGTGGTC...CTTCTCATGCTTGCCACAGTGCAGGGATAGTTTGGCTGTGAGACTCACAGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR GCA 90 bp | TCCTACATGATCCCTGTCAGGTGCCATCCTTGCATCCCTCTGTTTGAAAATGGCTGGGTCCTGCCGTCCTaGATCCTGCCGACCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SYMIPVRCHPCIPLFENGWVLPS*ILPTPL Trigger: GAGAGGGGTCGGCAGGATGCAGGACGGCAGGACCCA...GCCATTTTCAAACAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR GCA 90 bp | CCAAGCCCATTGGGCTCCGCACATAGGCAAGCAAAAATGATCTCTCATTTAGGGTGGGTCCTGCCGTCCTaGATCCTGCCGACCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLGSAHRQAKMISHLGWVLPS*ILPTPL Trigger: GAGAGGGGTCGGCAGGATGCAGGACGGCAGGACCCA...CCCTAAATGAGAGATCATTTTTGCTTGCCTATGTGCGGAGCCCAATGGGCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATTCCTGGGGACAGGACTaGGGGTCCCAGGATGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSSEAQNIPLPGREPIDSWGQD*GSQDAA Trigger: GGCTGCATCCTGGGACCCCCAGTCCTGTCCCCAGGA...ATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCTAAGGCCAGAACACCAGGTCCTGGTGAATGAGGGTCAACCCAGGAAGAACCCTTCTTCTTCTTaGAGGGCTCCTCACTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SALRPEHQVLVNEGQPRKNPSSS*RAPHWT Trigger: GGTCCAGTGAGGAGCCCTGCAAGAAGAAGAAGGGTT...CTTCCTGGGTTGACCCTCATTCACCAGGACCTGGTGTTCTGGCCTTAGGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGCAAAAATGATCTCTCATTTAGGGCAGGCTGCAGAGAATGGAGACAGGTCCTGGGGACAGGACTaGGGGTCCCAGGATGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQAKMISHLGQAAENGDRSWGQD*GSQDAA Trigger: GGCTGCATCCTGGGACCCCCAGTCCTGTCCCCAGGA...CCTGTCTCCATTCTCTGCAGCCTGCCCTAAATGAGAGATCATTTTTGCTTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCCAAACTATCCCTGCACTGTGGCAAGCATGAGAAGGCATGGAAGTGCCCTCATTCCGCTGTCACATaGCTGGCAATGGCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAKLSLHCGKHEKAWKCPHSAVT*LAMALG Trigger: TCCCAGTGCCATTGCCAGCCATGTGACAGCGGAATG...AGGGCACTTCCATGCCTTCTCATGCTTGCCACAGTGCAGGGATAGTTTGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAGCTGGCAGCAATCCTCTTGCCGCCTCATTCTGGTCCTGAAAGCCCAGGTCAACCAGACACTTGCTaGGACATTCCGCTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CKLAAILLPPHSGPESPGQPDTC*DIPLSH Trigger: ATGTGACAGCGGAATGTCCCAGCAAGTGTCTGGTTG...ACCTGGGCTTTCAGGACCAGAATGAGGCGGCAAGAGGATTGCTGCCAGCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR TCA 90 bp | AGGACCCAACTTACTATAGGTTCCTTGATTCTCTGGTTAGCTGGGAGAGTCCAGTCACCGTGGCTGCCATaGGGAGCTCCAACAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTQLTIGSLILWLAGRVQSPWLP*GAPTAG Trigger: TCCTGCTGTTGGAGCTCCTCATGGCAGCCACGGTGA...CTGGACTCTCCCAGCTAACCAGAGAATCAAGGAACCTATAGTAAGTTGGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR GCA 90 bp | AAGCATGAGAAGGCATGGAAGTGCCCTAAGGCCAGAACACCAGGTCCTGGTGAAAACCTCTTCGACAGCTaGAGGTCCTTGGGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHEKAWKCPKARTPGPGENLFDS*RSLGFE Trigger: CTCAAAGCCCAAGGACCTGCAGCTGTCGAAGAGGTT...TTCACCAGGACCTGGTGTTCTGGCCTTAGGGCACTTCCATGCCTTCTCATGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAAACTATCCCTGCACTGTGGCAAGCATGAGAAGGCATGGAAGTGCCCTAACCTCTTCGACAGCTaGAGGTCCTTGGGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAKLSLHCGKHEKAWKCPNLFDS*RSLGFE Trigger: CTCAAAGCCCAAGGACCTGCAGCTGTCGAAGAGGTT...AGGGCACTTCCATGCCTTCTCATGCTTGCCACAGTGCAGGGATAGTTTGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATTTTCACTCTCTCCCTGACCCTGGCAGCTCTTCTGAGGCACAGAATATAGACCCCTCTCCAGTGTaGGCATCCGGTCATAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KDFHSLPDPGSSSEAQNIDPSPV*ASGHSP Trigger: TGGGCTATGACCGGATGCCCACACTGGAGAGGGGTC...TATATTCTGTGCCTCAGAAGAGCTGCCAGGGTCAGGGAGAGAGTGAAAATCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR TCA 90 bp | AAGCATGAGAAGGCATGGAAGTGCCCTAAGGCCAGAACACCAGGTCCTGGTGAACGACTCTCATCACACTaGAGGACAGATATCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHEKAWKCPKARTPGPGERLSSH*RTDIQR Trigger: CCTCTGGATATCTGTCCTTCAGTGTGATGAGAGTCG...TTCACCAGGACCTGGTGTTCTGGCCTTAGGGCACTTCCATGCCTTCTCATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATACCCGTCACCGAGAGATGTaGACCCGAGACAGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSEAQNIPLPGREPIDTRHREM*TRDSFL Trigger: GAGGAAGCTGTCTCGGGTCCACATCTCTCGGTGACG...GGTATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | AAGCATGAGAAGGCATGGAAGTGCCCTAAGGCCAGAACACCAGGTCCTGGTGAACAACCAGACACTTGCTaGGACATTCCGCTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KHEKAWKCPKARTPGPGEQPDTC*DIPLSH Trigger: ATGTGACAGCGGAATGTCCCAGCAAGTGTCTGGTTG...TTCACCAGGACCTGGTGTTCTGGCCTTAGGGCACTTCCATGCCTTCTCATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR TCA 90 bp | AGGACCCAACTTACTATAGGTTCCTTGATTCTCTGGTTAGCTGGGAGAGTCCAGGAAGCTCACAATTGCTaGGGGGATGCAAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQLTIGSLILWLAGRVQEAHNC*GDARAC Trigger: GCAGGCTCTTGCATCCCCTCAGCAATTGTGAGCTTC...CTGGACTCTCCCAGCTAACCAGAGAATCAAGGAACCTATAGTAAGTTGGGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | AGGACCCAACTTACTATAGGTTCCTTGATTCTCTGGTTAGCTGGGAGAGTCCAGACAGCTGCAGGTCCTTaGGCTTTGAGTCAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTQLTIGSLILWLAGRVQTAAGP*ALSQGC Trigger: ACACCCCTGACTCAAAGCCCAAGGACCTGCAGCTGT...CTGGACTCTCCCAGCTAACCAGAGAATCAAGGAACCTATAGTAAGTTGGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGCAAAAATGATCTCTCATTTAGGGCAGGCTGCAGAGAATGGAGACAGGCCGCTGTCACATGGCTaGCAATGGCACTGGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQAKMISHLGQAAENGDRPLSHG*QWHWEN Trigger: GTTTTCCCAGTGCCATTGCCAGCCATGTGACAGCGG...CCTGTCTCCATTCTCTGCAGCCTGCCCTAAATGAGAGATCATTTTTGCTTGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTACATGATCCCTGTCAGGTGCCATCCTTGCATCCCTCTGTTTGAAAATCCGCTGTCACATGGCTaGCAATGGCACTGGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSYMIPVRCHPCIPLFENPLSHG*QWHWEN Trigger: GTTTTCCCAGTGCCATTGCCAGCCATGTGACAGCGG...ATTTTCAAACAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATACATTCCGCTGTCACATaGCTGGCAATGGCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AALLRHRIYLFLEGNPLIHSAVT*LAMALG Trigger: TCCCAGTGCCATTGCCAGCCATGTGACAGCGGAATG...TATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGCCCATTGGGCTCCGCACATAGGCAAGCAAAAATGATCTCTCATTTAGGGTTGAAGCTCACACACTaGATGGCGGTGCCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLGSAHRQAKMISHLGLKLTH*MAVPVL Trigger: CAACACTGGCACCGCCATCCAGTGTGTGAGCTTCAA...CCCTAAATGAGAGATCATTTTTGCTTGCCTATGTGCGGAGCCCAATGGGCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| 3UTR CAA 72 bp | TCAAAGTTAAACTACGACAGGAACCGAAAAGCCACCTaGCAGCCTGGGCTGCCCTCACAGGAGGGAAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKLNYDRNRKAT*QPGLPSQEGNS Trigger: ACTATTTCCCTCCTGTGAGGGCAGCCCAGGCTGCAAGGTGGCTTTTCGGTTCCTGTCGTAGTTTAACTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| 3UTR CAA 72 bp | GTGTGGTATATAGAGCTGCAGAGGACCCCAAGCCCATaGGGCTCCGCACATAGGCAAGCAAAAATGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWYIELQRTPSP*GSAHRQAKMIS Trigger: AGAGATCATTTTTGCTTGCCTATGTGCGGAGCCCAATGGGCTTGGGGTCCTCTGCAGCTCTATATACCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR GCA 90 bp | AGGACCCAACTTACTATAGGTTCCTTGATTCTCTGGTTAGCTGGGAGAGTCCAGAATGATCACCGTGGCTaGCATGAGGAGCTCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTQLTIGSLILWLAGRVQNDHRG*HEELQQ Trigger: CTGTTGGAGCTCCTCATGGCAGCCACGGTGATCATT...CTGGACTCTCCCAGCTAACCAGAGAATCAAGGAACCTATAGTAAGTTGGGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCTACATGATCCCTGTCAGGTGCCATCCTTGCATCCCTCTGTTTGAAAATTTGAAGCTCACACACTaGATGGCGGTGCCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSYMIPVRCHPCIPLFENLKLTH*MAVPVL Trigger: CAACACTGGCACCGCCATCCAGTGTGTGAGCTTCAA...ATTTTCAAACAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATACCCGACTCTCATCACACTaGAGGACAGATATCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSEAQNIPLPGREPIDTRLSSH*RTDIQR Trigger: CCTCTGGATATCTGTCCTTCAGTGTGATGAGAGTCG...GGTATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR GCA 90 bp | CACACACTGAGACCTAATAGGGCCCAACACTCAATATTTTCCTGTTTCAAAGTTAGTTCCTCCCTGAACTaGCCCTCCCGTGTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HTLRPNRAQHSIFSCFKVSSSLN*PSRVMA Trigger: CGCCATGACACGGGAGGGGCAGTTCAGGGAGGAACT...AACTTTGAAACAGGAAAATATTGAGTGTTGGGCCCTATTAGGTCTCAGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGCCCATTGGGCTCCGCACATAGGCAAGCAAAAATGATCTCTCATTTAGGGGGCTGGCAATGGCACTaGGAAAACAAGCCACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSPLGSAHRQAKMISHLGGWQWH*ENKPLK Trigger: TTTTAGTGGCTTGTTTTCCCAGTGCCATTGCCAGCC...CCCTAAATGAGAGATCATTTTTGCTTGCCTATGTGCGGAGCCCAATGGGCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| 3UTR CAA 72 bp | CCAGCTTCACAAAGGACCCAACTTACTATAGGTTCCTaGATTCTCTGGTTAGCTGGGAGAGTCCAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PASQRTQLTIGS*ILWLAGRVQLS Trigger: AGACAGCTGGACTCTCCCAGCTAACCAGAGAATCAAGGAACCTATAGTAAGTTGGGTCCTTTGTGAAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR TCA 90 bp | AAGCATGAGAAGGCATGGAAGTGCCCTAAGGCCAGAACACCAGGTCCTGGTGAAGAAACAAACAATATCTaGAAGTTGGGAATCGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KHEKAWKCPKARTPGPGEETNNI*KLGIAL Trigger: CAGTGCGATTCCCAACTTTCAGATATTGTTTGTTTC...TTCACCAGGACCTGGTGTTCTGGCCTTAGGGCACTTCCATGCCTTCTCATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | CACTCAATATTTTCCTGTTTCAAAGTTAAACTACGACAGGAACCGAAAAGCCACGACCCCTCTCCAGTGTaGGCATCCGGTCATAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSIFSCFKVKLRQEPKSHDPSPV*ASGHSP Trigger: TGGGCTATGACCGGATGCCCACACTGGAGAGGGGTC...GTGGCTTTTCGGTTCCTGTCGTAGTTTAACTTTGAAACAGGAAAATATTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATAGGCTGGCAATGGCACTaGGAAAACAAGCCACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AALLRHRIYLFLEGNPLIGWQWH*ENKPLK Trigger: TTTTAGTGGCTTGTTTTCCCAGTGCCATTGCCAGCC...TATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR TCA 90 bp | CACTCAATATTTTCCTGTTTCAAAGTTAAACTACGACAGGAACCGAAAAGCCACGAAGCTCACAATTGCTaGGGGGATGCAAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSIFSCFKVKLRQEPKSHEAHNC*GDARAC Trigger: GCAGGCTCTTGCATCCCCTCAGCAATTGTGAGCTTC...GTGGCTTTTCGGTTCCTGTCGTAGTTTAACTTTGAAACAGGAAAATATTGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATGAAACAAACAATATCTaGAAGTTGGGAATCGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSSEAQNIPLPGREPIDETNNI*KLGIAL Trigger: CAGTGCGATTCCCAACTTTCAGATATTGTTTGTTTC...ATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGCAATTCCTAAAATGATCCCCAGCTTCACAAAGGACCCAACTTACTATAACCCTTCTTCTTCTTaGAGGGCTCCTCACTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: QKAIPKMIPSFTKDPTYYNPSSS*RAPHWT Trigger: GGTCCAGTGAGGAGCCCTGCAAGAAGAAGAAGGGTT...ATAGTAAGTTGGGTCCTTTGTGAAGCTGGGGATCATTTTAGGAATTGCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CCA 90 bp | CACTCAATATTTTCCTGTTTCAAAGTTAAACTACGACAGGAACCGAAAAGCCACACAGCTGCAGGTCCTTaGGCTTTGAGTCAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSIFSCFKVKLRQEPKSHTAAGP*ALSQGC Trigger: ACACCCCTGACTCAAAGCCCAAGGACCTGCAGCTGT...GTGGCTTTTCGGTTCCTGTCGTAGTTTAACTTTGAAACAGGAAAATATTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS GCA 90 bp | TCTTCGACAGCTGCAGGTCCTTGGGCTTTGAGTCAGGGGTGTAGCTaGCTGGGTCCTGCCGTCCTGCATCCTGCCGACCCCTCTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTAAGPWALSQGCS*LGPAVLHPADPSPV Trigger: CACTGGAGAGGGGTCGGCAGGATGCAGGACGGCAGGACCCAGGCAGCTACACCCCTGACTCAAAGCCCAAGGACCTGCAGCTGTCGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS GCA 90 bp | CTTGCAGGGCTCCTCACTGGACCGGGCCGAAATGATCACCGTGGCTaGCATGAGGAGCTCCAACAGCAGGAGCAGGATGAGGTTGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: LAGLLTGPGRNDHRG*HEELQQQEQDEVEI Trigger: AATTTCAACCTCATCCTGCTCCTGCTGTTGGAGCTCCTCATGGCAGCCACGGTGATCATTTCGGCCCGGTCCAGTGAGGAGCCCTGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS TCA 90 bp | GAAGGCAGCTCCCCATTAACACAGAGAACACCCATGTCTTGTAGCTaGAGCACGGGGGCAACCTCTTCGACAGCTGCAGGTCCTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGSSPLTQRTPMSCS*STGATSSTAAGPWA Trigger: AGCCCAAGGACCTGCAGCTGTCGAAGAGGTTGCCCCCGTGCTTCAGCTACAAGACATGGGTGTTCTCTGTGTTAATGGGGAGCTGCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTGGGACCACCACTCCCTTCCCACCCAATAGCGTGTGGTATATAGAGCTGCAGCGAAGCTCACAATaGCTGAGGGGATGCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGTTTPFPPNSVWYIELQRSSQ*LRGCKS Trigger: GCTCTTGCATCCCCTCAGCAATTGTGAGCTTCGCTG...CAGCTCTATATACCACACGCTATTGGGTGGGAAGGGAGTGGTGGTCCCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATACCGCAGGTCCTTGGGCTTaGAGTCAGGGGTGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSEAQNIPLPGREPIDTAGPWA*SQGCSC Trigger: GCAGCTACACCCCTGACTCAAAGCCCAAGGACCTGC...GGTATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATAGCCGGGCGCTGACTTaGAAGCTCACACACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSSSEAQNIPLPGREPIDSRALT*KLTHWM Trigger: CATCCAGTGTGTGAGCTTCAAAGTCAGCGCCCGGCT...ATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATTCTTTGTCAAACTCCTaGAGGGGGCCTCGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSSSEAQNIPLPGREPIDSLSNS*RGPRTT Trigger: GGTGGTCCGAGGCCCCCTCAAGGAGTTTGACAAAGA...ATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CAA 90 bp | ATACAAACTATCTGTGAGTCTCACAGCCAAACTATCCCTGCACTGTGGCAAGCAGCAGGTCCTTGGGCTTaGAGTCAGGGGTGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IQTICESHSQTIPALWQAAGPWA*SQGCSC Trigger: GCAGCTACACCCCTGACTCAAAGCCCAAGGACCTGC...TGCTTGCCACAGTGCAGGGATAGTTTGGCTGTGAGACTCACAGATAGTTTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CAA 90 bp | TCCTACATGATCCCTGTCAGGTGCCATCCTTGCATCCCTCTGTTTGAAAATGGCGAACCCTTCTTCTTCTaGCAGGGCTCCTCACTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SYMIPVRCHPCIPLFENGEPFFF*QGSSLD Trigger: GTCCAGTGAGGAGCCCTGCAAGAAGAAGAAGGGTTC...GCCATTTTCAAACAGAGGGATGCAAGGATGGCACCTGACAGGGATCATGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGCAAAAATGATCTCTCATTTAGGGCAGGCTGCAGAGAATGGAGACAGGAGCCGGGCGCTGACTTaGAAGCTCACACACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RQAKMISHLGQAAENGDRSRALT*KLTHWM Trigger: CATCCAGTGTGTGAGCTTCAAAGTCAGCGCCCGGCT...CCTGTCTCCATTCTCTGCAGCCTGCCCTAAATGAGAGATCATTTTTGCTTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS TCA 90 bp | AATCGCACTGACATTTCTCCTCCCTACAGCGAAGCTCACAATTGCTaGGGGGATGCAAGAGCCTGCTGCACAGCGCAAATAATCCATCTC | + |
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Preference number: 5 (lower is better) Translates to: NRTDISPPYSEAHNC*GDARACCTAQIIHL Trigger: GAGATGGATTATTTGCGCTGTGCAGCAGGCTCTTGCATCCCCTCAGCAATTGTGAGCTTCGCTGTAGGGAGGAGAAATGTCAGTGCGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR CAA 90 bp | AGGACCCAACTTACTATAGGTTCCTTGATTCTCTGGTTAGCTGGGAGAGTCCAGCAGCGAAGCTCACAATaGCTGAGGGGATGCAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: RTQLTIGSLILWLAGRVQQRSSQ*LRGCKS Trigger: GCTCTTGCATCCCCTCAGCAATTGTGAGCTTCGCTG...CTGGACTCTCCCAGCTAACCAGAGAATCAAGGAACCTATAGTAAGTTGGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATAACCTCAACCAGACACTaGCTGGGACATTCCGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: AALLRHRIYLFLEGNPLITSTRH*LGHSAV Trigger: GACAGCGGAATGTCCCAGCAAGTGTCTGGTTGAGGT...TATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR CAA 90 bp | ATACAAACTATCTGTGAGTCTCACAGCCAAACTATCCCTGCACTGTGGCAAGCAGAACCCTTCTTCTTCTaGCAGGGCTCCTCACTGGAC | + |
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Preference number: 5 (lower is better) Translates to: IQTICESHSQTIPALWQAEPFFF*QGSSLD Trigger: GTCCAGTGAGGAGCCCTGCAAGAAGAAGAAGGGTTC...TGCTTGCCACAGTGCAGGGATAGTTTGGCTGTGAGACTCACAGATAGTTTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR CAA 90 bp | ATACAAACTATCTGTGAGTCTCACAGCCAAACTATCCCTGCACTGTGGCAAGCAACCTCAACCAGACACTaGCTGGGACATTCCGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: IQTICESHSQTIPALWQATSTRH*LGHSAV Trigger: GACAGCGGAATGTCCCAGCAAGTGTCTGGTTGAGGT...TGCTTGCCACAGTGCAGGGATAGTTTGGCTGTGAGACTCACAGATAGTTTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS TCA 90 bp | CAGCGAACGTGGAAACAAACAATATCTGAAAGTTGGGAATCGCACTaGCATTTCTCCTCCCTACAGCGAAGCTCACAATTGCTGAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: QRTWKQTISESWESH*HFSSLQRSSQLLRG Trigger: TCCCCTCAGCAATTGTGAGCTTCGCTGTAGGGAGGAGAAATGTCAGTGCGATTCCCAACTTTCAGATATTGTTTGTTTCCACGTTCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR CAA 90 bp | CACACACTGAGACCTAATAGGGCCCAACACTCAATATTTTCCTGTTTCAAAGTTTCTTTGTCAAACTCCTaGAGGGGGCCTCGGACCACC | + |
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Preference number: 5 (lower is better) Translates to: HTLRPNRAQHSIFSCFKVSLSNS*RGPRTT Trigger: GGTGGTCCGAGGCCCCCTCAAGGAGTTTGACAAAGA...AACTTTGAAACAGGAAAATATTGAGTGTTGGGCCCTATTAGGTCTCAGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS CCA 90 bp | CAGCAGCAACAGGAGCAGCAGGAGAACATCATAAGATTTGATGGCTaGCGGGTAATCTTTAAAAATCTCCACGACTCTCATCACACTGAA | + |
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Preference number: 5 (lower is better) Translates to: QQQQEQQENIIRFDG*RVIFKNLHDSHHTE Trigger: TTCAGTGTGATGAGAGTCGTGGAGATTTTTAAAGATTACCCGCCAGCCATCAAATCTTATGATGTTCTCCTGCTGCTCCTGTTGCTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCTCTTCTGAGGCACAGAATATACCTCTTCCTGGAAGGGAACCCATTGATAGGAGCAGGATGAGGTaGAAATTAATGTTTATGGCT | + |
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Preference number: 5 (lower is better) Translates to: GSSSEAQNIPLPGREPIDRSRMR*KLMFMA Trigger: AGCCATAAACATTAATTTCAACCTCATCCTGCTCCT...ATCAATGGGTTCCCTTCCAGGAAGAGGTATATTCTGTGCCTCAGAAGAGCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS TCA 90 bp | ATCAAACACGTAGTAGTCACAGCGAACGTGGAAACAAACAATATCTaGAAGTTGGGAATCGCACTGACATTTCTCCTCCCTACAGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: IKHVVVTANVETNNI*KLGIALTFLLPTAK Trigger: CTTCGCTGTAGGGAGGAGAAATGTCAGTGCGATTCCCAACTTTCAGATATTGTTTGTTTCCACGTTCGCTGTGACTACTACGTGTTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS TCA 90 bp | CTCCAACAGCAGGAGCAGGATGAGGTTGAAATTAATGTTTATGGCTaGAGGATTCAGGATCAGTTTACACCCAAACCAGATCAAACACGT | + |
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Preference number: 5 (lower is better) Translates to: LQQQEQDEVEINVYG*RIQDQFTPKPDQTR Trigger: ACGTGTTTGATCTGGTTTGGGTGTAAACTGATCCTGAATCCTTCAGCCATAAACATTAATTTCAACCTCATCCTGCTCCTGCTGTTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS GCA 72 bp | GCTGCAGGTCCTTGGGCTTTGAGTCAGGGGTGTAGCTaGCTGGGTCCTGCCGTCCTGCATCCTGCCGACCCC | + |
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Preference number: 6 (lower is better) Translates to: AAGPWALSQGCS*LGPAVLHPADP Trigger: GGGGTCGGCAGGATGCAGGACGGCAGGACCCAGGCAGCTACACCCCTGACTCAAAGCCCAAGGACCTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS GCA 72 bp | CTCCTCACTGGACCGGGCCGAAATGATCACCGTGGCTaGCATGAGGAGCTCCAACAGCAGGAGCAGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: LLTGPGRNDHRG*HEELQQQEQDE Trigger: CTCATCCTGCTCCTGCTGTTGGAGCTCCTCATGGCAGCCACGGTGATCATTTCGGCCCGGTCCAGTGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS CAA 72 bp | AGGCTGCTGATGGCTATCAGCACCTCAACCAGACACTaGCTGGGACATTCCGCTGTCACATGGCTGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: RLLMAISTSTRH*LGHSAVTWLAM Trigger: CATTGCCAGCCATGTGACAGCGGAATGTCCCAGCAAGTGTCTGGTTGAGGTGCTGATAGCCATCAGCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS TCA 72 bp | TCCCCATTAACACAGAGAACACCCATGTCTTGTAGCTaGAGCACGGGGGCAACCTCTTCGACAGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SPLTQRTPMSCS*STGATSSTAAG Trigger: ACCTGCAGCTGTCGAAGAGGTTGCCCCCGTGCTTCAGCTACAAGACATGGGTGTTCTCTGTGTTAATGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS CAA 72 bp | ATGTTAGAGCCATCGGAGATGGAACCCTTCTTCTTCTaGCAGGGCTCCTCACTGGACCGGGCCGAAATGATC | + |
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Preference number: 6 (lower is better) Translates to: MLEPSEMEPFFF*QGSSLDRAEMI Trigger: GATCATTTCGGCCCGGTCCAGTGAGGAGCCCTGCAAGAAGAAGAAGGGTTCCATCTCCGATGGCTCTAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS GCA 72 bp | TCCTCCCTACAGCGAAGCTCACAATTGCTGAGGGGATaGAAGAGCCTGCTGCACAGCGCAAATAATCCATCT | + |
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Preference number: 6 (lower is better) Translates to: SSLQRSSQLLRG*KSLLHSANNPS Trigger: AGATGGATTATTTGCGCTGTGCAGCAGGCTCTTGCATCCCCTCAGCAATTGTGAGCTTCGCTGTAGGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS CCA 72 bp | CAGGAGCAGCAGGAGAACATCATAAGATTTGATGGCTaGCGGGTAATCTTTAAAAATCTCCACGACTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: QEQQENIIRFDG*RVIFKNLHDSH Trigger: ATGAGAGTCGTGGAGATTTTTAAAGATTACCCGCCAGCCATCAAATCTTATGATGTTCTCCTGCTGCTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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| CDS TCA 72 bp | TGGAAACAAACAATATCTGAAAGTTGGGAATCGCACTaGCATTTCTCCTCCCTACAGCGAAGCTCACAATTG | + |
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Preference number: 6 (lower is better) Translates to: WKQTISESWESH*HFSSLQRSSQL Trigger: CAATTGTGAGCTTCGCTGTAGGGAGGAGAAATGTCAGTGCGATTCCCAACTTTCAGATATTGTTTGTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042594.13 ENSMUST00000109368.2 |
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