RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MLANA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024806

Ensembl transcript IDs: ENSMUST00000025719.5, ENSMUST00000235954.2

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TGCTCCCTGATCGTCCATGTGAGTTCACCCCTCAAAATAATATTAATGATGACATGGAGCTGTATATTCTaGAGCATTCTAAAGCGAAAC +
Preference number: 2 (lower is better)
Translates to: CSLIVHVSSPLKIILMMTWSCIF*SILKRN
Trigger: GTTTCGCTTTAGAATGCTGCAGAATATACAGCTCCA...TGTCATCATTAATATTATTTTGAGGGGTGAACTCACATGGACGATCAGGGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025719.5
3UTR-3UTR CAA 90 bp AGTTTCCCGGCTCTCAGGGTGAATAAGGTGGCGGTGAAGAGAGCTTCTCATAGGCTGATGGGATTTCTCTaGAGAAGACAGTCGGCTGTC +
Preference number: 3 (lower is better)
Translates to: SFPALRVNKVAVKRASHRLMGFL*RRQSAV
Trigger: GACAGCCGACTGTCTTCTCAAGAGAAATCCCATCAG...CCTATGAGAAGCTCTCTTCACCGCCACCTTATTCACCCTGAGAGCCGGGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
3UTR GCA 72 bp AGGTTAATATTTCTCACCATTCCTCCAATATCCCTCTaGTTGCCCTGTCAAGAATTTAGCACTGGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: RLIFLTIPPISL*LPCQEFSTGLL
Trigger: TAACAGGCCAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGGAATGGTGAGAAATATTAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025719.5
ENSMUST00000235954.2
3UTR CAA 72 bp CGGAGCGTTGGGAACCACGGGCTGATGGGATTTCTCTaGAGAAGACAGTCGGCTGTCCTGGTGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSVGNHGLMGFL*RRQSAVLVIRA
Trigger: AGCCCTGATCACCAGGACAGCCGACTGTCTTCTCAAGAGAAATCCCATCAGCCCGTGGTTCCCAACGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS-3UTR GCA 90 bp TTCTCACCATTCCTCCAATATCCCTCTGCTTGCCCTGTCAAGAATTTAGCACTGCAGGATGCCGATCCCTaGGGCCCTGGACCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: FSPFLQYPSACPVKNLALQDADP*GPGPGD
Trigger: ATCTCCTGGTCCAGGGCCGCAGGGATCGGCATCCTG...CAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGGAATGGTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS-3UTR TCA 90 bp TTCTCACCATTCCTCCAATATCCCTCTGCTTGCCCTGTCAAGAATTTAGCACTGCGGCCTCTTCAGCAGTaGCATAGGAGCGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FSPFLQYPSACPVKNLALRPLQQ*HRSVCA
Trigger: GGCACAGACGCTCCTATGTCACTGCTGAAGAGGCCG...CAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGGAATGGTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025719.5
CDS-3UTR TCA 90 bp CCATTCCTCCAATATCCCTCTGCTTGCCCTGTCAAGAATTTAGCACTGGCCTGTCAGACTCTTCAGCAGTaGCATAGGAGCGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PFLQYPSACPVKNLALACQTLQQ*HRSVCA
Trigger: GGCACAGACGCTCCTATGTCACTGCTGAAGAGTCTG...ACAGGCCAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS-3UTR GCA 90 bp TTCTCACCATTCCTCCAATATCCCTCTGCTTGCCCTGTCAAGAATTTAGCACTGCAGGATGCCGATCCCTaGGGCCTCTTCAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: FSPFLQYPSACPVKNLALQDADP*GLFSSD
Trigger: GTCACTGCTGAAGAGGCCGCAGGGATCGGCATCCTG...CAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGGAATGGTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025719.5
CDS-3UTR TCA 90 bp TTCTCACCATTCCTCCAATATCCCTCTGCTTGCCCTGTCAAGAATTTAGCACTGTTCGCACTGGGCACCTaGCCAGACTCTTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FSPFLQYPSACPVKNLALFALGT*PDSSAV
Trigger: CACTGCTGAAGAGTCTGGTCAGGTGCCCAGTGCGAA...CAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGGAATGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS-3UTR CCA 90 bp CCTCCAATATCCCTCTGCTTGCCCTGTCAAGAATTTAGCACTGGCCTGTTAGTGGTCTGTGCCCCTTCCTaGGATAACCAAAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: PPISLCLPCQEFSTGLLVVCAPS*DNQSEC
Trigger: ACATTCACTTTGGTTATCCCAGGAAGGGGCACAGAC...CACTAACAGGCCAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025719.5
ENSMUST00000235954.2
CDS-3UTR CCA 90 bp TTCTCACCATTCCTCCAATATCCCTCTGCTTGCCCTGTCAAGAATTTAGCACTGGTCTGTGCCCCTTCCTaGGATAACCAAAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: FSPFLQYPSACPVKNLALVCAPS*DNQSEC
Trigger: ACATTCACTTTGGTTATCCCAGGAAGGGGCACAGAC...CAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGGAATGGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025719.5
ENSMUST00000235954.2
CDS GCA 90 bp GATAAGCAGAGCAATCCCCAGGACCACGATCAGGATGCCGATCCCTaGGGCCTCTTCAGCAGTGACATAGGAGCGTCTGTGCCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: DKQSNPQDHDQDADP*GLFSSDIGASVPLP
Trigger: AGGAAGGGGCACAGACGCTCCTATGTCACTGCTGAAGAGGCCGCAGGGATCGGCATCCTGATCGTGGTCCTGGGGATTGCTCTGCTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025719.5
CDS TCA 90 bp CCAGGACCACGATCAGGATGCCGATCCCTGCGGCCTCTTCAGCAGTaGCATAGGAGCGTCTGTGCCCCTTCCTGGGATAACCAAAGTGAA +
Preference number: 5 (lower is better)
Translates to: PGPRSGCRSLRPLQQ*HRSVCAPSWDNQSE
Trigger: TTCACTTTGGTTATCCCAGGAAGGGGCACAGACGCTCCTATGTCACTGCTGAAGAGGCCGCAGGGATCGGCATCCTGATCGTGGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025719.5
CDS GCA 90 bp GATAAGCAGAGCAATCCCCAGGACCACGATCAGGATGCCGATCCCTaGGGCCCTGGACCAGGAGATAGGCATGTCCAACAGAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: DKQSNPQDHDQDADP*GPGPGDRHVQQSSE
Trigger: TTCTGAGCTCTGTTGGACATGCCTATCTCCTGGTCCAGGGCCGCAGGGATCGGCATCCTGATCGTGGTCCTGGGGATTGCTCTGCTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS CCA 90 bp GGAGATAGGCATGTCCAACAGAGCTCAGAAACATCGTTCCAGACTTaGATGAGACAGCAACCAACCTTCTCCCTTTTCGTGATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GDRHVQQSSETSFQT*MRQQPTFSLFVIQE
Trigger: TTCCTGGATCACGAAAAGGGAGAAGGTTGGTTGCTGTCTCATCCAAGTCTGGAACGATGTTTCTGAGCTCTGTTGGACATGCCTATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS-3UTR CAA 90 bp TTCTCACCATTCCTCCAATATCCCTCTGCTTGCCCTGTCAAGAATTTAGCACTGAACATCGTTCCAGACTaGGATGAGACAGCAACCAAC +
Preference number: 5 (lower is better)
Translates to: FSPFLQYPSACPVKNLALNIVPD*DETATN
Trigger: GTTGGTTGCTGTCTCATCCAAGTCTGGAACGATGTT...CAGTGCTAAATTCTTGACAGGGCAAGCAGAGGGATATTGGAGGAATGGTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS-3UTR CAA 90 bp CTCCCTGATCGTCCATGTGAGTTCACCCCTCAAAATAATATTAATGATGACAATCTGATGGGATTTCTCTaGAGAAGACAGTCGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LPDRPCEFTPQNNINDDNLMGFL*RRQSAV
Trigger: GACAGCCGACTGTCTTCTCAAGAGAAATCCCATCAG...ATTGTCATCATTAATATTATTTTGAGGGGTGAACTCACATGGACGATCAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025719.5
CDS GCA 72 bp AGCAATCCCCAGGACCACGATCAGGATGCCGATCCCTaGGGCCCTGGACCAGGAGATAGGCATGTCCAACAG +
Preference number: 6 (lower is better)
Translates to: SNPQDHDQDADP*GPGPGDRHVQQ
Trigger: CTGTTGGACATGCCTATCTCCTGGTCCAGGGCCGCAGGGATCGGCATCCTGATCGTGGTCCTGGGGATTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS TCA 72 bp CGATCAGGATGCCGATCCCTGCGGCCTCTTCAGCAGTaGCATAGGAGCGTCTGTGCCCCTTCCTGGGATAAC +
Preference number: 6 (lower is better)
Translates to: RSGCRSLRPLQQ*HRSVCAPSWDN
Trigger: GTTATCCCAGGAAGGGGCACAGACGCTCCTATGTCACTGCTGAAGAGGCCGCAGGGATCGGCATCCTGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025719.5
CDS GCA 72 bp AGCAATCCCCAGGACCACGATCAGGATGCCGATCCCTaGGGCCTCTTCAGCAGTGACATAGGAGCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: SNPQDHDQDADP*GLFSSDIGASV
Trigger: CACAGACGCTCCTATGTCACTGCTGAAGAGGCCGCAGGGATCGGCATCCTGATCGTGGTCCTGGGGATTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025719.5
CDS TCA 72 bp TCTTCGCACTGGGCACCTGACCAGACTCTTCAGCAGTaGCATAGGAGCGTCTGTGCCCCTTCCTGGGATAAC +
Preference number: 6 (lower is better)
Translates to: SSHWAPDQTLQQ*HRSVCAPSWDN
Trigger: GTTATCCCAGGAAGGGGCACAGACGCTCCTATGTCACTGCTGAAGAGTCTGGTCAGGTGCCCAGTGCGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS CCA 72 bp CATGTCCAACAGAGCTCAGAAACATCGTTCCAGACTTaGATGAGACAGCAACCAACCTTCTCCCTTTTCGTG +
Preference number: 6 (lower is better)
Translates to: HVQQSSETSFQT*MRQQPTFSLFV
Trigger: CACGAAAAGGGAGAAGGTTGGTTGCTGTCTCATCCAAGTCTGGAACGATGTTTCTGAGCTCTGTTGGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2
CDS CAA 72 bp GCATGTCCAACAGAGCTCAGAAACATCGTTCCAGACTaGGATGAGACAGCAACCAACCTTCTCCCTTTTCGT +
Preference number: 6 (lower is better)
Translates to: ACPTELRNIVPD*DETATNLLPFR
Trigger: ACGAAAAGGGAGAAGGTTGGTTGCTGTCTCATCCAAGTCTGGAACGATGTTTCTGAGCTCTGTTGGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235954.2