Pregenerated sensors for MKX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061013Ensembl transcript IDs: ENSMUST00000079788.7, ENSMUST00000176608.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCCTGGACCAGTGGGAATGATGCAGTCTAGCAAGTGTTGGCATTaGTGGTTTGAGGCACAGCTCTTCACTGTGCCCACGTTGGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: CPGPVGMMQSSKCWH*WFEAQLFTVPTLGL Trigger: AAGCCCCAACGTGGGCACAGTGAAGAGCTGTGCCTCAAACCATCAATGCCAACACTTGCTAGACTGCATCATTCCCACTGGTCCAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 90 bp | CACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACTTGGCTGGCTaGACGAGAAGAACCCAATACTTCATCCATTCATACAGTCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: HIWAGLSCSDPHLAG*TRRTQYFIHSYSQH Trigger: GTGCTGACTGTATGAATGGATGAAGTATTGGGTTCTTCTCGTGCAGCCAGCCAAGTGGGGATCACTACAAGACAAGCCTGCCCAGATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 90 bp | CTCCAGATTTCCTTTTCTACTGGGCATCTCCACATTCCTCTGGTTTaGAGTCTTCCCAGGCAGGGGAGGATGTTAATGCTTGATGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: LQISFSTGHLHIPLV*SLPRQGRMLMLDGK Trigger: TTTTCCATCAAGCATTAACATCCTCCCCTGCCTGGGAAGACTGCAAACCAGAGGAATGTGGAGATGCCCAGTAGAAAAGGAAATCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 90 bp | TATAATAGTATGAGAAAGAGTGAAGTATTCGTTCTTGCTTCTCACTaGCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: YNSMRKSEVFVLASH*LMHIWAGLSCSDPH Trigger: GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGCAAGAACGAATACTTCACTCTTTCTCATACTATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 90 bp | ATACAGGAGAAAGTGTCCTACGAGGGCCATCAAGGCCGTCATGTCTaGTCAGCAACCAGATTAACTTTGGCATTAAAAGCATTTTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: IQEKVSYEGHQGRHV*SATRLTLALKAFCK Trigger: TTTACAAAATGCTTTTAATGCCAAAGTTAATCTGGTTGCTGAGCAGACATGACGGCCTTGATGGCCCTCGTAGGACACTTTCTCCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR CAA 90 bp | GTATTCGTTCTTGCTTCTCACTGCCTCATGCACATCTGGGCAGGCTaGTCTTGTAGTGATCCCCACTTGGCTGGCTGCACGAGAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: VFVLASHCLMHIWAG*SCSDPHLAGCTRRT Trigger: GGTTCTTCTCGTGCAGCCAGCCAAGTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGCAAGAACGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTCACTGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACCTGGACCAGTGGGAATaGTGCAGTCTAGCAAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ASHCLMHIWAGLSCSDPHLDQWE*CSLASV Trigger: AACACTTGCTAGACTGCATCATTCCCACTGGTCCAG...GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCACTGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACGATTGGCTTCTGTCCTaGACCAGTGGGAATGATGCA | + |
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Preference number: 2 (lower is better) Translates to: ASHCLMHIWAGLSCSDPHDWLLS*TSGNDA Trigger: TGCATCATTCCCACTGGTCCAGGACAGAAGCCAATC...GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTCACTGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACTTTACTCACTCCACATaGAAGCGGCTTCCATCACAC | + |
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Preference number: 2 (lower is better) Translates to: ASHCLMHIWAGLSCSDPHFTHST*KRLPSH Trigger: GTGTGATGGAAGCCGCTTTCATGTGGAGTGAGTAAA...GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR CAA 90 bp | TGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACTaGGCTGGCTGCACGAGAAGAACCCAATACTTCATCCATTCATAC | + |
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Preference number: 2 (lower is better) Translates to: CLMHIWAGLSCSDPH*AGCTRRTQYFIHSY Trigger: GTATGAATGGATGAAGTATTGGGTTCTTCTCGTGCAGCCAGCCAAGTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCACTGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACAGTGTATGCATCATGTaGTCCTGCAGCACCTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: ASHCLMHIWAGLSCSDPHSVCIM*SCSTFH Trigger: ATGAAAGGTGCTGCAGGACCACATGATGCATACACT...GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCACTGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACGATGTCATTCACACTTaGAAAAATGCTTTCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: ASHCLMHIWAGLSCSDPHDVIHT*KNAFQP Trigger: AGGCTGGAAAGCATTTTTGCAAGTGTGAATGACATC...GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCACTGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACAAAAACGTCAGCATGTaGTGTGAAACCAGATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: ASHCLMHIWAGLSCSDPHKNVSM*CETRCH Trigger: ATGACATCTGGTTTCACAGCACATGCTGACGTTTTT...GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR GCA 90 bp | GGCCGTCATGTCTGCTCAGCAACCAGATTAACTTTGGCATTAAAAGCATTTTGTCACATTCCTCTGGTTTaGAGTCTTCCCAGGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GRHVCSATRLTLALKAFCHIPLV*SLPRQG Trigger: CCCCTGCCTGGGAAGACTGCAAACCAGAGGAATGTG...ACAAAATGCTTTTAATGCCAAAGTTAATCTGGTTGCTGAGCAGACATGACGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CCA 90 bp | ATTCCTCTGGTTTGCAGTCTTCCCAGGCAGGGGAGGATGTTAATGCTTGATGGAAGTTGTAAAGGGCATTaGGATACTTTCCAGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: IPLVCSLPRQGRMLMLDGSCKGH*DTFQQC Trigger: GCACTGCTGGAAAGTATCCCAATGCCCTTTACAACT...TCCATCAAGCATTAACATCCTCCCCTGCCTGGGAAGACTGCAAACCAGAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR GCA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTCACAGCTCTTCACTGTaGCCACGTTGGGGCTTACCT | + |
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Preference number: 2 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFHSSSL*PRWGLP Trigger: AGGTAAGCCCCAACGTGGGCACAGTGAAGAGCTGTG...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR TCA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTAAACAAACAACCCACTaGCAGCTCAGCACTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFKQTTH*QLSTSW Trigger: CCAGGAAGTGCTGAGCTGTCAGTGGGTTGTTTGTTT...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CCA 90 bp | GGCCGTCATGTCTGCTCAGCAACCAGATTAACTTTGGCATTAAAAGCATTTTGTAAAGATCACCTCATCTaGGCTGAACAGATTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GRHVCSATRLTLALKAFCKDHLI*AEQISK Trigger: CTTGGAAATCTGTTCAGCCCAGATGAGGTGATCTTT...ACAAAATGCTTTTAATGCCAAAGTTAATCTGGTTGCTGAGCAGACATGACGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR GCA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTCTCTTCTTAAGTGTATaGATCATGTGGTCCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFLFLSV*IMWSCS Trigger: GCTGCAGGACCACATGATGCATACACTTAAGAAGAG...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR GCA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTGATACTTTCCAGCAGTaGTTGGGAAAACAATCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFDTFQQ*LGKQSL Trigger: CAAGGATTGTTTTCCCAAGCACTGCTGGAAAGTATC...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CAA 90 bp | GCTTCTCACTGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACCCACATTCCTCTGGTTaGCAGTCTTCCCAGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: ASHCLMHIWAGLSCSDPHPHSSG*QSSQAG Trigger: CCCTGCCTGGGAAGACTGCAAACCAGAGGAATGTGG...GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 72 bp | GTTGGCATTGATGGTTTGAGGCACAGCTCTTCACTGTaGCCACGTTGGGGCTTACCTCAGGGAGCAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: VGIDGLRHSSSL*PRWGLPQGARH Trigger: GTGCCTTGCTCCCTGAGGTAAGCCCCAACGTGGGCACAGTGAAGAGCTGTGCCTCAAACCATCAATGCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR TCA 72 bp | CCAGTGGGAATGATGCAGTCTAGCAAGTGTTGGCATTaGTGGTTTGAGGCACAGCTCTTCACTGTGCCCACG | + |
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Preference number: 3 (lower is better) Translates to: PVGMMQSSKCWH*WFEAQLFTVPT Trigger: CGTGGGCACAGTGAAGAGCTGTGCCTCAAACCATCAATGCCAACACTTGCTAGACTGCATCATTCCCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR TCA 72 bp | TTTCGGCGATTGGCTTCTGTCCTGGACCAGTGGGAATaGTGCAGTCTAGCAAGTGTTGGCATTGATGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: FRRLASVLDQWE*CSLASVGIDGL Trigger: CAAACCATCAATGCCAACACTTGCTAGACTGCATCATTCCCACTGGTCCAGGACAGAAGCCAATCGCCGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 72 bp | TCCTTTTCTACTGGGCATCTCCACATTCCTCTGGTTTaGAGTCTTCCCAGGCAGGGGAGGATGTTAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: SFSTGHLHIPLV*SLPRQGRMLML Trigger: AAGCATTAACATCCTCCCCTGCCTGGGAAGACTGCAAACCAGAGGAATGTGGAGATGCCCAGTAGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 72 bp | GCAGGCTTGTCTTGTAGTGATCCCCACTTGGCTGGCTaGACGAGAAGAACCCAATACTTCATCCATTCATAC | + |
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Preference number: 3 (lower is better) Translates to: AGLSCSDPHLAG*TRRTQYFIHSY Trigger: GTATGAATGGATGAAGTATTGGGTTCTTCTCGTGCAGCCAGCCAAGTGGGGATCACTACAAGACAAGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 72 bp | AGAGTGAAGTATTCGTTCTTGCTTCTCACTGCCTCATaGACATCTGGGCAGGCTTGTCTTGTAGTGATCCCC | + |
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Preference number: 3 (lower is better) Translates to: RVKYSFLLLTAS*TSGQACLVVIP Trigger: GGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGCAAGAACGAATACTTCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CAA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTTTCACTGTGCCCACGTaGGGGCTTACCTCAGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFFTVPT*GLTSGS Trigger: GCTCCCTGAGGTAAGCCCCAACGTGGGCACAGTGAA...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR TCA 72 bp | TTCATTACACTAGATAACCCCCACCCCACTATGCTATaGTACAGGAGAAAGTGTCCTACGAGGGCCATCAAG | + |
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Preference number: 3 (lower is better) Translates to: FITLDNPHPTML*YRRKCPTRAIK Trigger: CTTGATGGCCCTCGTAGGACACTTTCTCCTGTATCATAGCATAGTGGGGTGGGGGTTATCTAGTGTAATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR TCA 72 bp | AGAACCCAATACTTCATCCATTCATACAGTCAGCACTaGCACATCTCACCTAGGGCAACTGCAACTGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: RTQYFIHSYSQH*HISPRATATAN Trigger: GTTGGCAGTTGCAGTTGCCCTAGGTGAGATGTGTCAGTGCTGACTGTATGAATGGATGAAGTATTGGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR CCA 72 bp | CAATATAAATTACATGTCAGCCGAGCTCTCAGCTGCTaGCTTGGCATTGCTCAAGGTGCTTTTAAGGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: QYKLHVSRALSC*LGIAQGAFKGQ Trigger: CTGACCCTTAAAAGCACCTTGAGCAATGCCAAGCCAGCAGCTGAGAGCTCGGCTGACATGTAATTTATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CAA 90 bp | GGCCGTCATGTCTGCTCAGCAACCAGATTAACTTTGGCATTAAAAGCATTTTGTGTTGGCATTGATGGTTaGAGGCACAGCTCTTCACTG | + |
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Preference number: 3 (lower is better) Translates to: GRHVCSATRLTLALKAFCVGIDG*RHSSSL Trigger: CAGTGAAGAGCTGTGCCTCAAACCATCAATGCCAAC...ACAAAATGCTTTTAATGCCAAAGTTAATCTGGTTGCTGAGCAGACATGACGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 72 bp | CTTCAATATAAATTACATGTCAGCCGAGCTCTCAGCTaGTGGCTTGGCATTGCTCAAGGTGCTTTTAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LQYKLHVSRALS*WLGIAQGAFKG Trigger: ACCCTTAAAAGCACCTTGAGCAATGCCAAGCCAGCAGCTGAGAGCTCGGCTGACATGTAATTTATATTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CAA 90 bp | AACCAGATGTCATTCACACTTGCAAAAATGCTTTCCAGCCTAAAACAATTAGAACTCTTCACCTCTGCTTaGGCTCTTAGGATGAGGATT | + |
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Preference number: 3 (lower is better) Translates to: NQMSFTLAKMLSSLKQLELFTSA*ALRMRI Trigger: AATCCTCATCCTAAGAGCCAAAGCAGAGGTGAAGAG...TTCTAATTGTTTTAGGCTGGAAAGCATTTTTGCAAGTGTGAATGACATCTGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR-3UTR CAA 90 bp | CACTCTGTGGTAGTGACATTTAGAAACAAGACTTTCTTTCTTTTAATGCAAGACACTTTCCAGCAGTGCTaGGGAAAACAATCCTTGACT | + |
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Preference number: 3 (lower is better) Translates to: HSVVVTFRNKTFFLLMQDTFQQC*GKQSLT Trigger: AGTCAAGGATTGTTTTCCCAAGCACTGCTGGAAAGT...GTCTTGCATTAAAAGAAAGAAAGTCTTGTTTCTAAATGTCACTACCACAGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR GCA 72 bp | TCAGCATGTGCTGTGAAACCAGATGTCATTCACACTTaGAAAAATGCTTTCCAGCCTAAAACAATTAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SACAVKPDVIHT*KNAFQPKTIRK Trigger: TTTTCTAATTGTTTTAGGCTGGAAAGCATTTTTGCAAGTGTGAATGACATCTGGTTTCACAGCACATGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR CAA 72 bp | CTTGCTTCTCACTGCCTCATGCACATCTGGGCAGGCTaGTCTTGTAGTGATCCCCACTTGGCTGGCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: LASHCLMHIWAG*SCSDPHLAGCT Trigger: CGTGCAGCCAGCCAAGTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR GCA 90 bp | GCTTCTCACTGCCTCATGCACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACTGCACTAGCGTCATCTaGGAGCCTAGGGCCAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: ASHCLMHIWAGLSCSDPHCTSVI*EPRAKS Trigger: ACTCTTGGCCCTAGGCTCGCAGATGACGCTAGTGCA...GTGGGGATCACTACAAGACAAGCCTGCCCAGATGTGCATGAGGCAGTGAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR CCA 90 bp | GGCCGTCATGTCTGCTCAGCAACCAGATTAACTTTGGCATTAAAAGCATTTTGTGAGGGGCGGGCCGTCTaGTATGCCCACCTCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRHVCSATRLTLALKAFCEGRAV*YAHLRP Trigger: GGGCCGGAGGTGGGCATACCAGACGGCCCGCCCCTC...ACAAAATGCTTTTAATGCCAAAGTTAATCTGGTTGCTGAGCAGACATGACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR CAA 72 bp | CACATCTGGGCAGGCTTGTCTTGTAGTGATCCCCACTaGGCTGGCTGCACGAGAAGAACCCAATACTTCATC | + |
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Preference number: 4 (lower is better) Translates to: HIWAGLSCSDPH*AGCTRRTQYFI Trigger: GATGAAGTATTGGGTTCTTCTCGTGCAGCCAGCCAAGTGGGGATCACTACAAGACAAGCCTGCCCAGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR TCA 90 bp | ATTCCTCTGGTTTGCAGTCTTCCCAGGCAGGGGAGGATGTTAATGCTTGATGGACAGTGCTGGTGGCCATaGCATGTCTCAAGGAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: IPLVCSLPRQGRMLMLDGQCWWP*HVSRSR Trigger: ACGACTCCTTGAGACATGTCATGGCCACCAGCACTG...TCCATCAAGCATTAACATCCTCCCCTGCCTGGGAAGACTGCAAACCAGAGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR GCA 90 bp | CCTGCAGCACCTTTCATTTTGGATGCACTAACTGATATGCAAACAAAACCCACAACCTTCCCTCCATTCTaGCGGGCCCCTGTCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PAAPFILDALTDMQTKPTTFPPF*RAPVLR Trigger: CCGGAGGACAGGGGCCCGGCAGAATGGAGGGAAGGT...TGTGGGTTTTGTTTGCATATCAGTTAGTGCATCCAAAATGAAAGGTGCTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| 3UTR CAA 72 bp | ATAAATTACATGTCAGCCGAGCTCTCAGCTGCTGGCTaGGCATTGCTCAAGGTGCTTTTAAGGGTCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: INYMSAELSAAG*ALLKVLLRVRG Trigger: CCCCCTGACCCTTAAAAGCACCTTGAGCAATGCCAAGCCAGCAGCTGAGAGCTCGGCTGACATGTAATTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR GCA 90 bp | ATTCCTCTGGTTTGCAGTCTTCCCAGGCAGGGGAGGATGTTAATGCTTGATGGAAACCAATTTGACACCTaGACTAGCGTCATCTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: IPLVCSLPRQGRMLMLDGNQFDT*TSVICE Trigger: CTCGCAGATGACGCTAGTGCAGGTGTCAAATTGGTT...TCCATCAAGCATTAACATCCTCCCCTGCCTGGGAAGACTGCAAACCAGAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR GCA 90 bp | ACTGTGCCCACGTTGGGGCTTACCTCAGGGAGCAAGGCACTTACTGTAATGGTAGACTGTCTTTACTTCTaGTATGTGGGAAGACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TVPTLGLTSGSKALTVMVDCLYF*YVGRLL Trigger: CAGAAGTCTTCCCACATAGCAGAAGTAAAGACAGTC...TACCATTACAGTAAGTGCCTTGCTCCCTGAGGTAAGCCCCAACGTGGGCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR GCA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTGGACGCGCCATGTCTTaGAGGGCCTGTCGCTTATGC | + |
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Preference number: 4 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFGRAMS*RACRLC Trigger: GCATAAGCGACAGGCCCTGCAAGACATGGCGCGTCC...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR GCA 90 bp | ATTCCTCTGGTTTGCAGTCTTCCCAGGCAGGGGAGGATGTTAATGCTTGATGGATGCGATAGACAAAGGTaGCTTCAGTTTCTGATGATG | + |
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Preference number: 4 (lower is better) Translates to: IPLVCSLPRQGRMLMLDGCDRQR*LQFLMM Trigger: CATCATCAGAAACTGAAGGCACCTTTGTCTATCGCA...TCCATCAAGCATTAACATCCTCCCCTGCCTGGGAAGACTGCAAACCAGAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS-3UTR TCA 90 bp | CCTGCAGCACCTTTCATTTTGGATGCACTAACTGATATGCAAACAAAACCCACAGCACCAGTGGCAGCTTaGCTGTCTTTACTTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PAAPFILDALTDMQTKPTAPVAA*LSLLLL Trigger: TAGCAGAAGTAAAGACAGTCAAGCTGCCACTGGTGC...TGTGGGTTTTGTTTGCATATCAGTTAGTGCATCCAAAATGAAAGGTGCTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR TCA 90 bp | GGCCGTCATGTCTGCTCAGCAACCAGATTAACTTTGGCATTAAAAGCATTTTGTCGTTCAGCGTTGCCCTaGACATACTTGTTGTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHVCSATRLTLALKAFCRSALP*TYLLYN Trigger: GTTATACAACAAGTATGTTCAGGGCAACGCTGAACG...ACAAAATGCTTTTAATGCCAAAGTTAATCTGGTTGCTGAGCAGACATGACGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR GCA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTTGTCCGGGGTGTCTGTaGGATAGACAAAGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFCPGCL*DRQRCL Trigger: AAGGCACCTTTGTCTATCGCACAGACACCCCGGACA...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTGAAGCGCTGCACCAGTaGCAGCTTGACTGTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFEALHQ*QLDCLY Trigger: GTAAAGACAGTCAAGCTGCCACTGGTGCAGCGCTTC...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| 3UTR CAA 72 bp | GTGTATGCATCATGTGGTCCTGCAGCACCTTTCATTTaGGATGCACTAACTGATATGCAAACAAAACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VYASCGPAAPFI*DALTDMQTKPT Trigger: TGTGGGTTTTGTTTGCATATCAGTTAGTGCATCCAAAATGAAAGGTGCTGCAGGACCACATGATGCATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGCACCTTTCATTTTGGATGCACTAACTGATATGCAAACAAAACCCACACCTTCTTCGTTCATGTaGTTTCTTGGGGGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAAPFILDALTDMQTKPTPSSFM*FLGGFS Trigger: AGAAAATCCCCCAAGAAATCACATGAACGAAGAAGG...TGTGGGTTTTGTTTGCATATCAGTTAGTGCATCCAAAATGAAAGGTGCTGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR TCA 90 bp | AACCAGATGTCATTCACACTTGCAAAAATGCTTTCCAGCCTAAAACAATTAGAAAGGCCATGGCTGCATTaGTCTCCTTCCAGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NQMSFTLAKMLSSLKQLERPWLH*SPSSMC Trigger: ACACATACTGGAAGGAGATCAATGCAGCCATGGCCT...TTCTAATTGTTTTAGGCTGGAAAGCATTTTTGCAAGTGTGAATGACATCTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR GCA 90 bp | CACTCTGTGGTAGTGACATTTAGAAACAAGACTTTCTTTCTTTTAATGCAAGACTCAGCCGTTCAGCGTTaGCCTGAACATACTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSVVVTFRNKTFFLLMQDSAVQR*PEHTCC Trigger: ACAACAAGTATGTTCAGGGCAACGCTGAACGGCTGA...GTCTTGCATTAAAAGAAAGAAAGTCTTGTTTCTAAATGTCACTACCACAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR GCA 90 bp | CACTCTGTGGTAGTGACATTTAGAAACAAGACTTTCTTTCTTTTAATGCAAGACAACGGTTCAACAAGCTaGTCTTATACTTGGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSVVVTFRNKTFFLLMQDNGSTS*SYTWAV Trigger: CACCGCCCAAGTATAAGAGCAGCTTGTTGAACCGTT...GTCTTGCATTAAAAGAAAGAAAGTCTTGTTTCTAAATGTCACTACCACAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CCA 90 bp | AACCAGATGTCATTCACACTTGCAAAAATGCTTTCCAGCCTAAAACAATTAGAATGTGTCATCTTTGCTTaGTCCCCTTCTGTTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQMSFTLAKMLSSLKQLECVIFA*SPSVSS Trigger: GCTGCTAACAGAAGGGGACCAAGCAAAGATGACACA...TTCTAATTGTTTTAGGCTGGAAAGCATTTTTGCAAGTGTGAATGACATCTGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS CCA 90 bp | CTTGAGGGGCGGGCCGTCTGGTATGCCCACCTCCGGCCCTGTGTGTaGATTGTCCAGGAAACCACTGAACGTCCGGCTGCCACGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LEGRAVWYAHLRPCV*IVQETTERPAATFP Trigger: CGGGAACGTGGCAGCCGGACGTTCAGTGGTTTCCTGGACAATCCACACACAGGGCCGGAGGTGGGCATACCAGACGGCCCGCCCCTCAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CCA 90 bp | CCTCCGGTGTCTCAGGCTGAGGTTGTCCTTGAGGGGCGGGCCGTCTaGTATGCCCACCTCCGGCCCTGTGTGTGGATTGTCCAGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: PPVSQAEVVLEGRAV*YAHLRPCVWIVQET Trigger: GGTTTCCTGGACAATCCACACACAGGGCCGGAGGTGGGCATACCAGACGGCCCGCCCCTCAAGGACAACCTCAGCCTGAGACACCGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS TCA 90 bp | GTATGCCCACCTCCGGCCCTGTGTGTGGATTGTCCAGGAAACCACTaGACGTCCGGCTGCCACGTTCCCGATCTGGAGTGCCTCGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCPPPALCVDCPGNH*TSGCHVPDLECLGL Trigger: AAGACCGAGGCACTCCAGATCGGGAACGTGGCAGCCGGACGTTCAGTGGTTTCCTGGACAATCCACACACAGGGCCGGAGGTGGGCATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS TCA 90 bp | GTCGTTAAGGTAACGGTTCAACAAGCTGCTCTTATACTTGGGCGGTaGCACATAATCCTCGGCAGCCCTCGACTCCGGTCTGCCGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVKVTVQQAALILGR*HIILGSPRLRSAAS Trigger: GCTGGCGGCAGACCGGAGTCGAGGGCTGCCGAGGATTATGTGTCACCGCCCAAGTATAAGAGCAGCTTGTTGAACCGTTACCTTAACGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | ATTCCTCTGGTTTGCAGTCTTCCCAGGCAGGGGAGGATGTTAATGCTTGATGGAAGGCTGAGGTTGTCCTaGAGGGGCGGGCCGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IPLVCSLPRQGRMLMLDGRLRLS*RGGPSG Trigger: ACCAGACGGCCCGCCCCTCAAGGACAACCTCAGCCT...TCCATCAAGCATTAACATCCTCCCCTGCCTGGGAAGACTGCAAACCAGAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS CCA 90 bp | AAGCGCTGCACCAGTGGCAGCTTGACTGTCTTTACTTCTGCTATGTaGGAAGACTTCTGGATGATGCAACTGGTGGTCGTCCCCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KRCTSGSLTVFTSAM*EDFWMMQLVVVPCT Trigger: AGTGCAGGGGACGACCACCAGTTGCATCATCCAGAAGTCTTCCCACATAGCAGAAGTAAAGACAGTCAAGCTGCCACTGGTGCAGCGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS GCA 90 bp | TTCTTGGGGGATTTTCTCCATCTTCAGAGCAGGAGTCGCCATCGCTaGTCACACTCAGCCGTTCAGCGTTGCCCTGAACATACTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLGDFLHLQSRSRHR*SHSAVQRCPEHTCC Trigger: ACAACAAGTATGTTCAGGGCAACGCTGAACGGCTGAGTGTGAGCAGCGATGGCGACTCCTGCTCTGAAGATGGAGAAAATCCCCCAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | ACTGTGCCCACGTTGGGGCTTACCTCAGGGAGCAAGGCACTTACTGTAATGGTAAAGGCCATGGCTGCATaGATCTCCTTCCAGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVPTLGLTSGSKALTVMVKAMAA*ISFQYV Trigger: CACATACTGGAAGGAGATCAATGCAGCCATGGCCTT...TACCATTACAGTAAGTGCCTTGCTCCCTGAGGTAAGCCCCAACGTGGGCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS GCA 90 bp | GCTATGTGGGAAGACTTCTGGATGATGCAACTGGTGGTCGTCCCCTaGACTTCATCTTTTCCTTGGGCAAGGTTTGTTAAGGCCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AMWEDFWMMQLVVVP*TSSFPWARFVKAMA Trigger: AGCCATGGCCTTAACAAACCTTGCCCAAGGAAAAGATGAAGTGCAGGGGACGACCACCAGTTGCATCATCCAGAAGTCTTCCCACATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS CCA 90 bp | TGGATGATGCAACTGGTGGTCGTCCCCTGCACTTCATCTTTTCCTTaGGCAAGGTTTGTTAAGGCCATGGCTGCATTGATCTCCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WMMQLVVVPCTSSFP*ARFVKAMAALISFQ Trigger: CTGGAAGGAGATCAATGCAGCCATGGCCTTAACAAACCTTGCCCAAGGAAAAGATGAAGTGCAGGGGACGACCACCAGTTGCATCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGCATCTCTTCTTAAGTGTATGCATCATGTGGTCCTGCAGCACCTTTCAAGGACGCGCCATGTCTaGCAGGGCCTGTCGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: LKASLLKCMHHVVLQHLSRTRHV*QGLSLM Trigger: CATAAGCGACAGGCCCTGCAAGACATGGCGCGTCCT...TGAAAGGTGCTGCAGGACCACATGATGCATACACTTAAGAAGAGATGCTTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS CCA 90 bp | AGTGGCAGCTTGACTGTCTTTACTTCTGCTATGTGGGAAGACTTCTaGATGATGCAACTGGTGGTCGTCCCCTGCACTTCATCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGSLTVFTSAMWEDF*MMQLVVVPCTSSFP Trigger: AGGAAAAGATGAAGTGCAGGGGACGACCACCAGTTGCATCATCCAGAAGTCTTCCCACATAGCAGAAGTAAAGACAGTCAAGCTGCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGCACCTTTCATTTTGGATGCACTAACTGATATGCAAACAAAACCCACAACGGCTCCCCCGAGCTaGTTGAAGACGATGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAAPFILDALTDMQTKPTTAPPS*LKTMVF Trigger: GAACACCATCGTCTTCAACAAGCTCGGGGGAGCCGT...TGTGGGTTTTGTTTGCATATCAGTTAGTGCATCCAAAATGAAAGGTGCTGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTTGTCTCAGGCTGAGGTaGTCCTTGAGGGGCGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFCLRLR*SLRGGP Trigger: CGGCCCGCCCCTCAAGGACAACCTCAGCCTGAGACA...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS TCA 90 bp | CTTCATCTTTTCCTTGGGCAAGGTTTGTTAAGGCCATGGCTGCATTaGTCTCCTTCCAGTATGTGTCATCTTTGCTTGGTCCCCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHLFLGQGLLRPWLH*SPSSMCHLCLVPFC Trigger: ACAGAAGGGGACCAAGCAAAGATGACACATACTGGAAGGAGATCAATGCAGCCATGGCCTTAACAAACCTTGCCCAAGGAAAAGATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | GGCCGTCATGTCTGCTCAGCAACCAGATTAACTTTGGCATTAAAAGCATTTTGTTTCCTTGGGCAAGGTTaGTTAAGGCCATGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRHVCSATRLTLALKAFCFLGQG*LRPWLH Trigger: ATGCAGCCATGGCCTTAACAAACCTTGCCCAAGGAA...ACAAAATGCTTTTAATGCCAAAGTTAATCTGGTTGCTGAGCAGACATGACGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | GGCCGTCATGTCTGCTCAGCAACCAGATTAACTTTGGCATTAAAAGCATTTTGTTCTTCTTCAAATTCGTaGGAGCTAAAAGACCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRHVCSATRLTLALKAFCSSSNS*ELKDPE Trigger: TTCGGGGTCTTTTAGCTCCAACGAATTTGAAGAAGA...ACAAAATGCTTTTAATGCCAAAGTTAATCTGGTTGCTGAGCAGACATGACGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | CACTCTGTGGTAGTGACATTTAGAAACAAGACTTTCTTTCTTTTAATGCAAGACTGCACCAGTGGCAGCTaGACTGTCTTTACTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSVVVTFRNKTFFLLMQDCTSGS*TVFTSA Trigger: AGCAGAAGTAAAGACAGTCAAGCTGCCACTGGTGCA...GTCTTGCATTAAAAGAAAGAAAGTCTTGTTTCTAAATGTCACTACCACAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS-3UTR CAA 90 bp | AAAAGACTTTTCTTTCTTGATAGCGATTGCTCTCACTCTGTGGTAGTGACATTTCGTTCATGTGATTTCTaGGGGGATTTTCTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRLFFLDSDCSHSVVVTFRSCDF*GDFLHL Trigger: AAGATGGAGAAAATCCCCCAAGAAATCACATGAACG...AAATGTCACTACCACAGAGTGAGAGCAATCGCTATCAAGAAAGAAAAGTCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS CAA 90 bp | CCTCCATTCTGCCGGGCCCCTGTCCTCCGGTGTCTCAGGCTGAGGTaGTCCTTGAGGGGCGGGCCGTCTGGTATGCCCACCTCCGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPFCRAPVLRCLRLR*SLRGGPSGMPTSGP Trigger: AGGGCCGGAGGTGGGCATACCAGACGGCCCGCCCCTCAAGGACAACCTCAGCCTGAGACACCGGAGGACAGGGGCCCGGCAGAATGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CAA 72 bp | GCCCCTGTCCTCCGGTGTCTCAGGCTGAGGTTGTCCTaGAGGGGCGGGCCGTCTGGTATGCCCACCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: APVLRCLRLRLS*RGGPSGMPTSG Trigger: GCCGGAGGTGGGCATACCAGACGGCCCGCCCCTCAAGGACAACCTCAGCCTGAGACACCGGAGGACAGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CAA 72 bp | TGCCGGGCCCCTGTCCTCCGGTGTCTCAGGCTGAGGTaGTCCTTGAGGGGCGGGCCGTCTGGTATGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: CRAPVLRCLRLR*SLRGGPSGMPT Trigger: GGTGGGCATACCAGACGGCCCGCCCCTCAAGGACAACCTCAGCCTGAGACACCGGAGGACAGGGGCCCGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CAA 90 bp | TTCTGCCGGGCCCCTGTCCTCCGGTGTCTCAGGCTGAGGTTGTCCTaGAGGGGCGGGCCGTCTGGTATGCCCACCTCCGGCCCTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FCRAPVLRCLRLRLS*RGGPSGMPTSGPVC Trigger: ACACACAGGGCCGGAGGTGGGCATACCAGACGGCCCGCCCCTCAAGGACAACCTCAGCCTGAGACACCGGAGGACAGGGGCCCGGCAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CCA 72 bp | CGGGCCGTCTGGTATGCCCACCTCCGGCCCTGTGTGTaGATTGTCCAGGAAACCACTGAACGTCCGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RAVWYAHLRPCV*IVQETTERPAA Trigger: GGCAGCCGGACGTTCAGTGGTTTCCTGGACAATCCACACACAGGGCCGGAGGTGGGCATACCAGACGGCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CAA 90 bp | AGGGGCGGGCCGTCTGGTATGCCCACCTCCGGCCCTGTGTGTGGATaGTCCAGGAAACCACTGAACGTCCGGCTGCCACGTTCCCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: RGGPSGMPTSGPVCG*SRKPLNVRLPRSRS Trigger: AGATCGGGAACGTGGCAGCCGGACGTTCAGTGGTTTCCTGGACAATCCACACACAGGGCCGGAGGTGGGCATACCAGACGGCCCGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS GCA 72 bp | AGGGCCTGTCGCTTATGCCTTACCTTCCCTCCATTCTaGCGGGCCCCTGTCCTCCGGTGTCTCAGGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RACRLCLTFPPF*RAPVLRCLRLR Trigger: CCTCAGCCTGAGACACCGGAGGACAGGGGCCCGGCAGAATGGAGGGAAGGTAAGGCATAAGCGACAGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CCA 72 bp | TCTCAGGCTGAGGTTGTCCTTGAGGGGCGGGCCGTCTaGTATGCCCACCTCCGGCCCTGTGTGTGGATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQAEVVLEGRAV*YAHLRPCVWIV Trigger: GACAATCCACACACAGGGCCGGAGGTGGGCATACCAGACGGCCCGCCCCTCAAGGACAACCTCAGCCTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CAA 72 bp | CCGTCTGGTATGCCCACCTCCGGCCCTGTGTGTGGATaGTCCAGGAAACCACTGAACGTCCGGCTGCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: PSGMPTSGPVCG*SRKPLNVRLPR Trigger: ACGTGGCAGCCGGACGTTCAGTGGTTTCCTGGACAATCCACACACAGGGCCGGAGGTGGGCATACCAGACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS CAA 72 bp | CTTGTAAAGCCACTGCTTAAGAGGACGCGCCATGTCTaGCAGGGCCTGTCGCTTATGCCTTACCTTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVKPLLKRTRHV*QGLSLMPYLPS Trigger: GGAGGGAAGGTAAGGCATAAGCGACAGGCCCTGCAAGACATGGCGCGTCCTCTTAAGCAGTGGCTTTACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079788.7 ENSMUST00000176608.2 |
||
| CDS TCA 72 bp | GTAACGGTTCAACAAGCTGCTCTTATACTTGGGCGGTaGCACATAATCCTCGGCAGCCCTCGACTCCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VTVQQAALILGR*HIILGSPRLRS Trigger: AGACCGGAGTCGAGGGCTGCCGAGGATTATGTGTCACCGCCCAAGTATAAGAGCAGCTTGTTGAACCGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS CCA 72 bp | CAACTGGTGGTCGTCCCCTGCACTTCATCTTTTCCTTaGGCAAGGTTTGTTAAGGCCATGGCTGCATTGATC | + |
|
Preference number: 6 (lower is better) Translates to: QLVVVPCTSSFP*ARFVKAMAALI Trigger: GATCAATGCAGCCATGGCCTTAACAAACCTTGCCCAAGGAAAAGATGAAGTGCAGGGGACGACCACCAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS GCA 72 bp | TTAGCGAACCAATTTGACACCTGCACTAGCGTCATCTaGGAGCCTAGGGCCAAGAGTATCTTCTCAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LANQFDTCTSVI*EPRAKSIFSVF Trigger: GAAGACTGAGAAGATACTCTTGGCCCTAGGCTCGCAGATGACGCTAGTGCAGGTGTCAAATTGGTTCGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS GCA 72 bp | ATCCGATGTCCGGGGTGTCTGTGCGATAGACAAAGGTaGCTTCAGTTTCTGATGATGATGGAGACACCAACT | + |
|
Preference number: 6 (lower is better) Translates to: IRCPGCLCDRQR*LQFLMMMETPT Trigger: AGTTGGTGTCTCCATCATCATCAGAAACTGAAGGCACCTTTGTCTATCGCACAGACACCCCGGACATCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS TCA 72 bp | CTGTCTTTACTTCTGCTATGTGGGAAGACTTCTGGATaGTGCAACTGGTGGTCGTCCCCTGCACTTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLLLLCGKTSG*CNWWSSPALHL Trigger: AAGATGAAGTGCAGGGGACGACCACCAGTTGCATCATCCAGAAGTCTTCCCACATAGCAGAAGTAAAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS GCA 72 bp | GAAGACTTCTGGATGATGCAACTGGTGGTCGTCCCCTaGACTTCATCTTTTCCTTGGGCAAGGTTTGTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: EDFWMMQLVVVP*TSSFPWARFVK Trigger: CTTAACAAACCTTGCCCAAGGAAAAGATGAAGTGCAGGGGACGACCACCAGTTGCATCATCCAGAAGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS CAA 90 bp | ACTTCATCTTTTCCTTGGGCAAGGTTTGTTAAGGCCATGGCTGCATaGATCTCCTTCCAGTATGTGTCATCTTTGCTTGGTCCCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TSSFPWARFVKAMAA*ISFQYVSSLLGPLL Trigger: CAGAAGGGGACCAAGCAAAGATGACACATACTGGAAGGAGATCAATGCAGCCATGGCCTTAACAAACCTTGCCCAAGGAAAAGATGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
||
| CDS CAA 72 bp | GATGATGATGGAGACACCAACTCTTCTTCAAATTCGTaGGAGCTAAAAGACCCCGAATGGTTCCTTCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DDDGDTNSSSNS*ELKDPEWFLRL Trigger: AAGGCGAAGGAACCATTCGGGGTCTTTTAGCTCCAACGAATTTGAAGAAGAGTTGGTGTCTCCATCATCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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| CDS CAA 72 bp | TTTCCTTGGGCAAGGTTTGTTAAGGCCATGGCTGCATaGATCTCCTTCCAGTATGTGTCATCTTTGCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: FPWARFVKAMAA*ISFQYVSSLLG Trigger: ACCAAGCAAAGATGACACATACTGGAAGGAGATCAATGCAGCCATGGCCTTAACAAACCTTGCCCAAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079788.7 |
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