Pregenerated sensors for MKS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034121Ensembl transcript IDs: ENSMUST00000038196.7
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGGCTGGCCTCAAATTCATAGATATCCTCCTGCCTCTGCCACTTaGGTGCTGGGATTAAAGGTGTGTGCACCATTACGCCTGGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: PGWPQIHRYPPASAT*VLGLKVCAPLRLVA Trigger: GGCAACCAGGCGTAATGGTGCACACACCTTTAATCCCAGCACTCAAGTGGCAGAGGCAGGAGGATATCTATGAATTTGAGGCCAGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR CCA 90 bp | CATGGAGGAAAGAATGTCCTGCTGAAGATGAGGCAGGGGAGCCGGTaGGAAGTTTCTAGATCATCCAGTTTGGTCGACCAATGTGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: HGGKNVLLKMRQGSR*EVSRSSSLVDQCGL Trigger: GAGACCACATTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCTCATCTTCAGCAGGACATTCTTTCCTCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR TCA 90 bp | CCTCTGCTATGGAGGTTCCAGGACAAACCAGAAAAGACACTGTACTaGGGAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACT | + |
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Preference number: 1 (lower is better) Translates to: PLLWRFQDKPEKTLY*GEANAGFPPDEFQT Trigger: AGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTCCTCAGTACAGTGTCTTTTCTGGTTTGTCCTGGAACCTCCATAGCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCCAGACATCTTTCCCTTaGTCCACAGGCCAGGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: QPAGELRTPPGYVPKPASQTSFP*STGQGC Trigger: GCAACCCTGGCCTGTGGAGCAAGGGAAAGATGTCTG...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR CCA 90 bp | GACCAGGCTGGCCTCAAATTCATAGATATCCTCCTGCCTCTGCCACTTGAGTGCGAGCAGGGTGTCAGGTaGGGCCCCAGAGTCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: DQAGLKFIDILLPLPLECEQGVR*GPRVSG Trigger: GCCTGAGACTCTGGGGCCCCACCTGACACCCTGCTC...GCACTCAAGTGGCAGAGGCAGGAGGATATCTATGAATTTGAGGCCAGCCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCCCAGAGTCTCAGGCTTaGCTTCTGCATGGAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: QPAGELRTPPGYVPKPASPESQA*LLHGGK Trigger: CTTTCCTCCATGCAGAAGTCAAGCCTGAGACTCTGG...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCTTCCTCCTCGGAAGATaGCAAACTCCATGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: QPAGELRTPPGYVPKPASFLLGR*QTPCCC Trigger: GCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGAA...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTAGGCAGGGGAGCCGGTaGGAAGTTTCTAGATCATCC | + |
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Preference number: 2 (lower is better) Translates to: ERLMLGFPQTSFRLHGLPRQGSR*EVSRSS Trigger: GGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCT...AGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCGAAAAGACACTGTACTaGGGAGAGGCTAATGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QPAGELRTPPGYVPKPASEKTLY*GEANAG Trigger: CCCAGCATTAGCCTCTCCTCAGTACAGTGTCTTTTC...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCAGATGCCAAACTCCATaGTGCTGCTGTCTGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QPAGELRTPPGYVPKPASRCQTP*CCCLLL Trigger: CAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCT...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR TCA 90 bp | TGTACTGAGGAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACTTGATAGCCAAAACATaGGCAGGGTGTCAGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CTEERLMLGFPQTSFRLHLIAKT*AGCQVG Trigger: CCCCACCTGACACCCTGCTCATGTTTTGGCTATCAA...GTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTCCTCAGTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTCGGAAGATGCCAAACTCCATGCTGCTGCTGTCTGCTTTTGTTGTTGCATAAGCAAGACAAAGTaGGAGCACTGGATGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: SSSEDAKLHAAAVCFCCCISKTK*EHWMQT Trigger: TGTCTGCATCCAGTGCTCTCACTTTGTCTTGCTTAT...GCAACAACAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR TCA 72 bp | AGCAGGGTGTCAGGTGGGGCCCCAGAGTCTCAGGCTTaGCTTCTGCATGGAGGAAAGAATGTCCTGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: SRVSGGAPESQA*LLHGGKNVLLK Trigger: CTTCAGCAGGACATTCTTTCCTCCATGCAGAAGTCAAGCCTGAGACTCTGGGGCCCCACCTGACACCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR CAA 90 bp | GACCAGGCTGGCCTCAAATTCATAGATATCCTCCTGCCTCTGCCACTTGAGTGCGCAGACATCTTTCCCTaGCTCCACAGGCCAGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: DQAGLKFIDILLPLPLECADIFP*LHRPGL Trigger: CAACCCTGGCCTGTGGAGCAAGGGAAAGATGTCTGC...GCACTCAAGTGGCAGAGGCAGGAGGATATCTATGAATTTGAGGCCAGCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR GCA 72 bp | TGCCTCTGCCACTTGAGTGCTGGGATTAAAGGTGTGTaGACCATTACGCCTGGTTGCCAAACTCCCTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: CLCHLSAGIKGV*TITPGCQTPFW Trigger: CCAAAAGGGAGTTTGGCAACCAGGCGTAATGGTGCACACACCTTTAATCCCAGCACTCAAGTGGCAGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR-3UTR CAA 90 bp | CTTCCTCCTCGGAAGATGCCAAACTCCATGCTGCTGCTGTCTGCTTTTGTTGTTCCCAGAGTCTCAGGCTaGACTTCTGCATGGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LPPRKMPNSMLLLSAFVVPRVSG*TSAWRK Trigger: TTTCCTCCATGCAGAAGTCAAGCCTGAGACTCTGGG...AACAACAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR CCA 72 bp | AAGAATGTCCTGCTGAAGATGAGGCAGGGGAGCCGGTaGGAAGTTTCTAGATCATCCAGTTTGGTCGACCAA | + |
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Preference number: 3 (lower is better) Translates to: KNVLLKMRQGSR*EVSRSSSLVDQ Trigger: TTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCTCATCTTCAGCAGGACATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR CCA 72 bp | GCCAGGAAGTTGAGGCCCCTTACTCTCACCTTTTCTTaGAAGAAACAAGAGTCTAAGCTCCGGAATGCACCT | + |
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Preference number: 3 (lower is better) Translates to: ARKLRPLTLTFS*KKQESKLRNAP Trigger: AGGTGCATTCCGGAGCTTAGACTCTTGTTTCTTCCAAGAAAAGGTGAGAGTAAGGGGCCTCAACTTCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR TCA 72 bp | CCTCAAATTCATAGATATCCTCCTGCCTCTGCCACTTaGGTGCTGGGATTAAAGGTGTGTGCACCATTACGC | + |
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Preference number: 3 (lower is better) Translates to: PQIHRYPPASAT*VLGLKVCAPLR Trigger: GCGTAATGGTGCACACACCTTTAATCCCAGCACTCAAGTGGCAGAGGCAGGAGGATATCTATGAATTTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| 3UTR CCA 72 bp | AGGGGAGCCGGTGGGAAGTTTCTAGATCATCCAGTTTaGTCGACCAATGTGGTCTCTAATAAGCAAGACAAA | + |
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Preference number: 3 (lower is better) Translates to: RGAGGKFLDHPV*STNVVSNKQDK Trigger: TTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCACCCCTCGCCTGTCCTaGCGCCGCCGCCTGACGTTC | + |
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Preference number: 4 (lower is better) Translates to: QPAGELRTPPGYVPKPASTPRLS*RRRLTF Trigger: GAACGTCAGGCGGCGGCGGCAGGACAGGCGAGGGGT...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCCCTCGCCGGTGTCAGTaGTCCAGACCGCTTCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: QPAGELRTPPGYVPKPASPRRCQ*SRPLPP Trigger: TGGCGGAAGCGGTCTGGAGCACTGACACCGGCGAGG...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | GAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTGGGCTCACAAGGTCCTaGGGGAGGCTCTCTCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ERLMLGFPQTSFRLHGLPGLTRS*GRLSRA Trigger: GGCCCGAGAGAGCCTCCCCCAGGACCTTGTGAGCCC...AGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | GAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTTGTGCCCACGAGGCTGCTaGGGTACTCCTTGTGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: EANAGFPPDEFQTARPALCPRGC*GTPCAG Trigger: GCCGGCACAAGGAGTACCTCAGCAGCCTCGTGGGCA...CAAGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | GAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTTGCAGGGTGTGGGATCCTaGAGTGGCAGGCAGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: EANAGFPPDEFQTARPALQGVGS*SGRQHH Trigger: GTGGTGCTGCCTGCCACTCCAGGATCCCACACCCTG...CAAGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | TGTACTGAGGAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACCTCTCTCGGGCCTCCTaGATCCGACGCCGGGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: CTEERLMLGFPQTSFRLHLSRAS*IRRRAR Trigger: TCGAGCCCGGCGTCGGATGCAGGAGGCCCGAGAGAG...GTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTCCTCAGTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | CTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCCCTAAAATGTCAGGGGTTACTCCCGAGAGCTaGTGGAATGGCGGGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LRTPPGYVPKPASPKMSGVTPES*WNGGLD Trigger: GTCCAGCCCGCCATTCCAGCAGCTCTCGGGAGTAAC...CCCTGACATTTTAGGGCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | GAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTATGAAAGCCCGGGACTaGTGCAGGCAGTGCAATCGG | + |
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Preference number: 4 (lower is better) Translates to: ERLMLGFPQTSFRLHGLPMKARD*CRQCNR Trigger: CCGATTGCACTGCCTGCAGCAGTCCCGGGCTTTCAT...AGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | CTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCCCTAAAATGTCAGGGCGAGAGCTGCTGGAATaGCGGGCTGGACCAGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: LRTPPGYVPKPASPKMSGRELLE*RAGPVS Trigger: GCTAACTGGTCCAGCCCGCCATTCCAGCAGCTCTCG...CCCTGACATTTTAGGGCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGGAGCCGGTGGGAAGTTTCTAGATCATCCAGTTTGGTCGACCAATGTTGTGGGATCCTGGAGTaGCAGGCAGCACCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RQGSRWEVSRSSSLVDQCCGILE*QAAPQP Trigger: GGGCTGTGGTGCTGCCTGCCACTCCAGGATCCCACA...ACATTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | CTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCCCTAAAATGTCAGGGTGCGTGGAACTCTGCTaGCTGAACCCTTCCAGACGG | + |
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Preference number: 4 (lower is better) Translates to: LRTPPGYVPKPASPKMSGCVELC*LNPSRR Trigger: CCGTCTGGAAGGGTTCAGCCAGCAGAGTTCCACGCA...CCCTGACATTTTAGGGCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | GAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTCTGCCAGAAGTCCAGTaGGAGGACCTTACAGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: ERLMLGFPQTSFRLHGLPLPEVQ*EDLTVE Trigger: CTCTACTGTAAGGTCCTCTCACTGGACTTCTGGCAG...AGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | GAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTGACTGCTGCAGGCAGTaGAATCGGAAGGTGACAGTA | + |
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Preference number: 4 (lower is better) Translates to: ERLMLGFPQTSFRLHGLPDCCRQ*NRKVTV Trigger: TACTGTCACCTTCCGATTGCACTGCCTGCAGCAGTC...AGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | GAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTTGTATCCTCACATAGGATaGGTCCTCCAGCTCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: EANAGFPPDEFQTARPALYPHIG*VLQLQR Trigger: TCTCTGGAGCTGGAGGACCCATCCTATGTGAGGATA...CAAGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCGGAAGATGCCAAACTCCATGCTGCTGCTGTCTGCTTTTGTTGTTGCTGGAACTCTGCTGGCTaGACCCTTCCAGACGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSSEDAKLHAAAVCFCCCWNSAG*TLPDGP Trigger: TGGACCGTCTGGAAGGGTTCAGCCAGCAGAGTTCCA...GCAACAACAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | TGTACTGAGGAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACTCCTTGAACACTCGCTaGTCCCGCTCTTCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: CTEERLMLGFPQTSFRLHSLNTR*SRSSSS Trigger: AGAGGAGGAAGAGCGGGAGCAGCGAGTGTTCAAGGA...GTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTCCTCAGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | GAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTGCCGATTCGTCCTCATaGAGAAAGAAGGCTTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: ERLMLGFPQTSFRLHGLPADSSS*RKKASN Trigger: ATTCGAAGCCTTCTTTCTGCATGAGGACGAATCGGC...AGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGGAGCCGGTGGGAAGTTTCTAGATCATCCAGTTTGGTCGACCAATGTCCATTCCCAGGGATTTaGTGGCACAGGCCTGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: RQGSRWEVSRSSSLVDQCPFPGI*WHRPGL Trigger: TAACCCAGGCCTGTGCCACCAAATCCCTGGGAATGG...ACATTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | GACCAGGCTGGCCTCAAATTCATAGATATCCTCCTGCCTCTGCCACTTGAGTGCGTCCCAGGTCCGCCATaGTGTACATTGTCTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: DQAGLKFIDILLPLPLECVPGPP*CTLSEE Trigger: CTCTTCAGACAATGTACATCATGGCGGACCTGGGAC...GCACTCAAGTGGCAGAGGCAGGAGGATATCTATGAATTTGAGGCCAGCCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | TTTCTAGATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAACTCGGAGGCGCAGGTTaGGCACGGGGTCCCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FLDHPVWSTNVVSNKQDKLGGAG*ARGPGS Trigger: GCTCCCGGGACCCCGTGCGCAACCTGCGCCTCCGAG...TTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATCTAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | TCCTCCTCGGAAGATGCCAAACTCCATGCTGCTGCTGTCTGCTTTTGTTGTTGCGTACTGATGATCCAGTaGGCTCTGGCACGCGGATTC | + |
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Preference number: 4 (lower is better) Translates to: SSSEDAKLHAAAVCFCCCVLMIQ*ALARGF Trigger: GAATCCGCGTGCCAGAGCCCACTGGATCATCAGTAC...GCAACAACAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGGAGCCGGTGGGAAGTTTCTAGATCATCCAGTTTGGTCGACCAATGTGGACCAGTTAGCAGCTaGCAGCTCCACAAAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: RQGSRWEVSRSSSLVDQCGPVSS*QLHKEV Trigger: CACTTCTTTGTGGAGCTGCCAGCTGCTAACTGGTCC...ACATTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | GAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTGGAAGTTGCTTGATGTaGTTCTTTGCAGATGAACTC | + |
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Preference number: 4 (lower is better) Translates to: ERLMLGFPQTSFRLHGLPGSCLM*FFADEL Trigger: GAGTTCATCTGCAAAGAATCACATCAAGCAACTTCC...AGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCATGAAGGAAGTTGCTTaGTGTGATTCTTTGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: QPAGELRTPPGYVPKPASMKEVA*CDSLQM Trigger: CATCTGCAAAGAATCACATCAAGCAACTTCCTTCAT...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | CTTCCTCCTCGGAAGATGCCAAACTCCATGCTGCTGCTGTCTGCTTTTGTTGTTAAGTGGCCAAGTCTATaGGGTCCTTCCCCATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LPPRKMPNSMLLLSAFVVKWPSL*GPSPSG Trigger: CCCAGATGGGGAAGGACCTCATAGACTTGGCCACTT...AACAACAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | AGGCAGGGGAGCCGGTGGGAAGTTTCTAGATCATCCAGTTTGGTCGACCAATGTTGGCACCTCGCTGGCTaGAGTGGTTATTTTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: RQGSRWEVSRSSSLVDQCWHLAG*SGYFLT Trigger: TGTCAGAAAATAACCACTTCAGCCAGCGAGGTGCCA...ACATTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGGAGCCGGTGGGAAGTTTCTAGATCATCCAGTTTGGTCGACCAATGTTTCGCCGGTTTTTCCTaGCGCCAGAATTCTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: RQGSRWEVSRSSSLVDQCFAGFS*RQNSPV Trigger: AACTGGAGAATTCTGGCGGCAGGAAAAACCGGCGAA...ACATTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCGGAAGATGCCAAACTCCATGCTGCTGCTGTCTGCTTTTGTTGTTGCTTGTGCGTGGAACTCTaGTGGCTGAACCCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSEDAKLHAAAVCFCCCLCVEL*WLNPSR Trigger: TCTGGAAGGGTTCAGCCAGCAGAGTTCCACGCACAA...GCAACAACAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | TGTACTGAGGAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACCTCCGCATCTGTTTCTaGAGGGAGTTCGATTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CTEERLMLGFPQTSFRLHLRICF*REFDSM Trigger: CATGGAATCGAACTCCCTCCAGAAACAGATGCGGAG...GTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTCCTCAGTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | GACCAGGCTGGCCTCAAATTCATAGATATCCTCCTGCCTCTGCCACTTGAGTGCACGATGGCACCTCGCTaGCTGAAGTGGTTATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DQAGLKFIDILLPLPLECTMAPR*LKWLFS Trigger: AGAAAATAACCACTTCAGCCAGCGAGGTGCCATCGT...GCACTCAAGTGGCAGAGGCAGGAGGATATCTATGAATTTGAGGCCAGCCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | GATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAAGTGAGACCGCTCTTCCTCCTCTaGCTGTGCGAGGGAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DHPVWSTNVVSNKQDKVRPLFLL*LCEGGH Trigger: GTGTCCTCCCTCGCACAGCCAGAGGAGGAAGAGCGG...TCTCACTTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | TGTACTGAGGAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACCCTCGCTGGCTGAAGTaGTTATTTTCTGACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CTEERLMLGFPQTSFRLHPRWLK*LFSDST Trigger: AGTACTGTCAGAAAATAACCACTTCAGCCAGCGAGG...GTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTCCTCAGTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CCA 90 bp | GATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAAGTGAGAGAGACAGTCAGGGTGTaGGATCCTGGAGTGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DHPVWSTNVVSNKQDKVRETVRV*DPGVAG Trigger: GCCTGCCACTCCAGGATCCCACACCCTGACTGTCTC...TCTCACTTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | GATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAAGTGAGAGCTTCTAGCACGTTGTaGGTGGAACTCTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DHPVWSTNVVSNKQDKVRASSTL*VELCWL Trigger: CAGCCAGCAGAGTTCCACGCACAACGTGCTAGAAGC...TCTCACTTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCGGAAGATGCCAAACTCCATGCTGCTGCTGTCTGCTTTTGTTGTTGCCTAAAGAGCTTTTCCTaGCATCCAATTACAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSEDAKLHAAAVCFCCCLKSFS*HPITTS Trigger: AGAGGTTGTAATTGGATGGCAGGAAAAGCTCTTTAG...GCAACAACAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR GCA 90 bp | GATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAAGTGAGATACCCGTTGTCTCAGTaGGGAATCCAAAGCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DHPVWSTNVVSNKQDKVRYPLSQ*GIQSGS Trigger: TGAGCCGCTTTGGATTCCGCACTGAGACAACGGGTA...TCTCACTTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | TTTCTAGATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAAAGTCAGGCTTCACTGTaGTCACGCCATTGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLDHPVWSTNVVSNKQDKSQASL*SRHCCP Trigger: TGGACAGCAATGGCGTGATCACAGTGAAGCCTGACT...TTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATCTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | TTTCTAGATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAACCGAGTCAGTGTAAGTaGAGATTCGCCGGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLDHPVWSTNVVSNKQDKPSQCK*RFAGFS Trigger: GGAAAAACCGGCGAATCTTCACTTACACTGACTCGG...TTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATCTAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR TCA 90 bp | TTTCTAGATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAAAGAAGGCTTCGAATGTaGACGGAAAGGAGAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLDHPVWSTNVVSNKQDKRRLRM*TERRNR Trigger: CCTATTTCTCCTTTCCGTTCACATTCGAAGCCTTCT...TTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATCTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 90 bp | CCCGTGGGGCTCACAAGGTCCTGGGGGAGGCTCTCTCGGGCCTCCTaGATCCGACGCCGGGCTCGACGGAATGCTTCTAGCACGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVGLTRSWGRLSRAS*IRRRARRNASSTLC Trigger: GCACAACGTGCTAGAAGCATTCCGTCGAGCCCGGCGTCGGATGCAGGAGGCCCGAGAGAGCCTCCCCCAGGACCTTGTGAGCCCCACGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 90 bp | ACGATCCGAGACTTGAGTTTGCTGCCCTCCACCCCTCGCCTGTCCTaGCGCCGCCGCCTGACGTTCGCCATCCGCTCAGCCAGAAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: TIRDLSLLPSTPRLS*RRRLTFAIRSARND Trigger: ATCGTTTCTGGCTGAGCGGATGGCGAACGTCAGGCGGCGGCGGCAGGACAGGCGAGGGGTGGAGGGCAGCAAACTCAAGTCTCGGATCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | ACCTCCTTAGCTCTGCCACGAGACCCAGCTCCATGGGCCTCCATGTaGAGACAGTCAGGGTGTGGGATCCTGGAGTGGCAGGCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TSLALPRDPAPWASM*RQSGCGILEWQAAP Trigger: TGGTGCTGCCTGCCACTCCAGGATCCCACACCCTGACTGTCTCCACATGGAGGCCCATGGAGCTGGGTCTCGTGGCAGAGCTAAGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | AGTGCGGAATCCAAAGCGGCTCAGGCGCTCCCCCTTGAAGGTTCCTaGTATCCTCACATAGGATGGGTCCTCCAGCTCCAGAGAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAESKAAQALPLEGS*YPHIGWVLQLQRAA Trigger: GGCGGCTCTCTGGAGCTGGAGGACCCATCCTATGTGAGGATACCAGGAACCTTCAAGGGGGAGCGCCTGAGCCGCTTTGGATTCCGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 90 bp | CACAGCCCCGTAGCCTTCCACACGATACCTCTGCCAGAAGTCCAGTaGGAGGACCTTACAGTAGAGCACAGGCCACTCCGGGAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: HSPVAFHTIPLPEVQ*EDLTVEHRPLREGL Trigger: GAGTCCCTCCCGGAGTGGCCTGTGCTCTACTGTAAGGTCCTCTCACTGGACTTCTGGCAGAGGTATCGTGTGGAAGGCTACGGGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 90 bp | CGCCGGGCTCGACGGAATGCTTCTAGCACGTTGTGCGTGGAACTCTaGTGGCTGAACCCTTCCAGACGGTCCAACACACTCCGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRARRNASSTLCVEL*WLNPSRRSNTLRIC Trigger: ACAGATGCGGAGTGTGTTGGACCGTCTGGAAGGGTTCAGCCAGCAGAGTTCCACGCACAACGTGCTAGAAGCATTCCGTCGAGCCCGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | GGATTTGGTGGCACAGGCCTGGGTTACTCCCGAGAGCTGCTGGAATaGCGGGCTGGACCAGTTAGCAGCTGGCAGCTCCACAAAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFGGTGLGYSRELLE*RAGPVSSWQLHKEV Trigger: CACTTCTTTGTGGAGCTGCCAGCTGCTAACTGGTCCAGCCCGCCATTCCAGCAGCTCTCGGGAGTAACCCAGGCCTGTGCCACCAAATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | ACGGAAAGGAGAAATAGGCCACCTTGTCCATTCCCAGGGATTTGGTaGCACAGGCCTGGGTTACTCCCGAGAGCTGCTGGAATGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TERRNRPPCPFPGIW*HRPGLLPRAAGMAG Trigger: GCCCGCCATTCCAGCAGCTCTCGGGAGTAACCCAGGCCTGTGCCACCAAATCCCTGGGAATGGACAAGGTGGCCTATTTCTCCTTTCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | TGGCTGAACCCTTCCAGACGGTCCAACACACTCCGCATCTGTTTCTaGAGGGAGTTCGATTCCATGAAAGCCCGGGACTGCTGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WLNPSRRSNTLRICF*REFDSMKARDCCRQ Trigger: CTGCCTGCAGCAGTCCCGGGCTTTCATGGAATCGAACTCCCTCCAGAAACAGATGCGGAGTGTGTTGGACCGTCTGGAAGGGTTCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | CGGGCTCGACGGAATGCTTCTAGCACGTTGTGCGTGGAACTCTGCTaGCTGAACCCTTCCAGACGGTCCAACACACTCCGCATCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RARRNASSTLCVELC*LNPSRRSNTLRICF Trigger: GAAACAGATGCGGAGTGTGTTGGACCGTCTGGAAGGGTTCAGCCAGCAGAGTTCCACGCACAACGTGCTAGAAGCATTCCGTCGAGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 90 bp | TGGAGGGAGTTCGATTCCATGAAAGCCCGGGACTGCTGCAGGCAGTaGAATCGGAAGGTGACAGTACCCGTTGTCTCAGTGCGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: WREFDSMKARDCCRQ*NRKVTVPVVSVRNP Trigger: TGGATTCCGCACTGAGACAACGGGTACTGTCACCTTCCGATTGCACTGCCTGCAGCAGTCCCGGGCTTTCATGGAATCGAACTCCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 90 bp | TCCCCATCTGGGCAGCAGGCTGGTAATGAAGGAAGTTGCTTGATGTaGTTCTTTGCAGATGAACTCGGAGGCGCAGGTTGCGCACGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPSGQQAGNEGSCLM*FFADELGGAGCARG Trigger: ACCCCGTGCGCAACCTGCGCCTCCGAGTTCATCTGCAAAGAATCACATCAAGCAACTTCCTTCATTACCAGCCTGCTGCCCAGATGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 90 bp | CTCGACGGAATGCTTCTAGCACGTTGTGCGTGGAACTCTGCTGGCTaGACCCTTCCAGACGGTCCAACACACTCCGCATCTGTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDGMLLARCAWNSAG*TLPDGPTHSASVSG Trigger: TCCAGAAACAGATGCGGAGTGTGTTGGACCGTCTGGAAGGGTTCAGCCAGCAGAGTTCCACGCACAACGTGCTAGAAGCATTCCGTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | GCCGTAAAGGTCCTTGAACACTCGCTGCTCCCGCTCTTCCTCCTCTaGCTGTGCGAGGGAGGACACGTTGTCAATTGTGTATTTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVKVLEHSLLPLFLL*LCEGGHVVNCVFPS Trigger: GCTTGGAAATACACAATTGACAACGTGTCCTCCCTCGCACAGCCAGAGGAGGAAGAGCGGGAGCAGCGAGTGTTCAAGGACCTTTACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CAA 90 bp | GATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAAGTGAGAACTCGGAGGCGCAGGTaGCGCACGGGGTCCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DHPVWSTNVVSNKQDKVRTRRRR*RTGSRE Trigger: CTCCCGGGACCCCGTGCGCAACCTGCGCCTCCGAGT...TCTCACTTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CAA 90 bp | AGGCAGGGGAGCCGGTGGGAAGTTTCTAGATCATCCAGTTTGGTCGACCAATGTGTGTCCACTAGCAGCTaGCGGAGGCCTAAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQGSRWEVSRSSSLVDQCVSTSS*RRPKSG Trigger: GCCACTTTTAGGCCTCCGCAAGCTGCTAGTGGACAC...ACATTGGTCGACCAAACTGGATGATCTAGAAACTTCCCACCGGCTCCCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CAA 90 bp | CTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCCCTAAAATGTCAGGGACTGTGATCACGCCATaGCTGTCCACCTTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LRTPPGYVPKPASPKMSGTVITP*LSTFRM Trigger: CATCCTGAAGGTGGACAGCAATGGCGTGATCACAGT...CCCTGACATTTTAGGGCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 90 bp | GTCCTTCCCCATCTGGGCAGCAGGCTGGTAATGAAGGAAGTTGCTTaGTGTGATTCTTTGCAGATGAACTCGGAGGCGCAGGTTGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLPHLGSRLVMKEVA*CDSLQMNSEAQVAH Trigger: GTGCGCAACCTGCGCCTCCGAGTTCATCTGCAAAGAATCACATCAAGCAACTTCCTTCATTACCAGCCTGCTGCCCAGATGGGGAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CAA 90 bp | GAGAGGCTAATGCTGGGTTTCCCCCAGACGAGTTTCAGACTGCACGGCCTGCCTATAGCGTGGTTGTTCTaGATGAAGTCTTCCGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ERLMLGFPQTSFRLHGLPIAWLF*MKSSEG Trigger: ACCCTCGGAAGACTTCATCAAGAACAACCACGCTAT...AGGCAGGCCGTGCAGTCTGAAACTCGTCTGGGGGAAACCCAGCATTAGCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 90 bp | AAGGTCCTTGAACACTCGCTGCTCCCGCTCTTCCTCCTCTGGCTGTaGGAGGGAGGACACGTTGTCAATTGTGTATTTCCAAGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KVLEHSLLPLFLLWL*EGGHVVNCVFPSRS Trigger: ACTTCTGCTTGGAAATACACAATTGACAACGTGTCCTCCCTCGCACAGCCAGAGGAGGAAGAGCGGGAGCAGCGAGTGTTCAAGGACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CAA 90 bp | CAGCCAGCAGGAGAACTGAGAACTCCCCCAGGCTATGTCCCAAAGCCAGCCAGCAGGACACGTTGTCAATaGTGTATTTCCAAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPAGELRTPPGYVPKPASRTRCQ*CISKQK Trigger: CTTCTGCTTGGAAATACACAATTGACAACGTGTCCT...GCTGGCTGGCTTTGGGACATAGCCTGGGGGAGTTCTCAGTTCTCCTGCTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 90 bp | GACGTTCGCCATCCGCTCAGCCAGAAACGATGGCACCTCGCTGGCTaGAGTGGTTATTTTCTGACAGTACTCTTCCAAGTCGGTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: DVRHPLSQKRWHLAG*SGYFLTVLFQVGVS Trigger: AGATACACCGACTTGGAAGAGTACTGTCAGAAAATAACCACTTCAGCCAGCGAGGTGCCATCGTTTCTGGCTGAGCGGATGGCGAACGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | TCGCCATCCGCTCAGCCAGAAACGATGGCACCTCGCTGGCTGAAGTaGTTATTTTCTGACAGTACTCTTCCAAGTCGGTGTATCTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPSAQPETMAPRWLK*LFSDSTLPSRCIYP Trigger: CGGATAGATACACCGACTTGGAAGAGTACTGTCAGAAAATAACCACTTCAGCCAGCGAGGTGCCATCGTTTCTGGCTGAGCGGATGGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CAA 90 bp | TCCTCCTCGGAAGATGCCAAACTCCATGCTGCTGCTGTCTGCTTTTGTTGTTGCAATGCTTCTAGCACGTaGTGCGTGGAACTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSEDAKLHAAAVCFCCCNASST*CVELCW Trigger: CCAGCAGAGTTCCACGCACAACGTGCTAGAAGCATT...GCAACAACAAAAGCAGACAGCAGCAGCATGGAGTTTGGCATCTTCCGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 90 bp | GGGACTCAGCCGATTCGTCCTCATGCAGAAAGAAGGCTTCGAATGTaGACGGAAAGGAGAAATAGGCCACCTTGTCCATTCCCAGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GTQPIRPHAERRLRM*TERRNRPPCPFPGI Trigger: AATCCCTGGGAATGGACAAGGTGGCCTATTTCTCCTTTCCGTTCACATTCGAAGCCTTCTTTCTGCATGAGGACGAATCGGCTGAGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 90 bp | GACAGTACTCTTCCAAGTCGGTGTATCTATCCGAGTCAGTGTAAGTaGAGATTCGCCGGTTTTTCCTGCCGCCAGAATTCTCCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DSTLPSRCIYPSQCK*RFAGFSCRQNSPVS Trigger: TGAAACTGGAGAATTCTGGCGGCAGGAAAAACCGGCGAATCTTCACTTACACTGACTCGGATAGATACACCGACTTGGAAGAGTACTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 90 bp | AGAATTCTCCAGTTTCAAGATCTCTTGGCGGTACTGATGATCCAGTaGGCTCTGGCACGCGGATTCATTTTGGTACAGGTCGACTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RILQFQDLLAVLMIQ*ALARGFILVQVDFK Trigger: TTTGAAGTCGACCTGTACCAAAATGAATCCGCGTGCCAGAGCCCACTGGATCATCAGTACCGCCAAGAGATCTTGAAACTGGAGAATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS-3UTR CAA 90 bp | TTTCTAGATCATCCAGTTTGGTCGACCAATGTGGTCTCTAATAAGCAAGACAAATCCATTCCCAGGGATTaGGTGGCACAGGCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLDHPVWSTNVVSNKQDKSIPRD*VAQAWV Trigger: AACCCAGGCCTGTGCCACCAAATCCCTGGGAATGGA...TTTGTCTTGCTTATTAGAGACCACATTGGTCGACCAAACTGGATGATCTAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | TGCCCTCCACCCCTCGCCTGTCCTGCCGCCGCCGCCTaGCGTTCGCCATCCGCTCAGCCAGAAACGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CPPPLACPAAAA*RSPSAQPETMA Trigger: TGCCATCGTTTCTGGCTGAGCGGATGGCGAACGTCAGGCGGCGGCGGCAGGACAGGCGAGGGGTGGAGGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 72 bp | CTCACAAGGTCCTGGGGGAGGCTCTCTCGGGCCTCCTaGATCCGACGCCGGGCTCGACGGAATGCTTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTRSWGRLSRAS*IRRRARRNASS Trigger: GCTAGAAGCATTCCGTCGAGCCCGGCGTCGGATGCAGGAGGCCCGAGAGAGCCTCCCCCAGGACCTTGTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 72 bp | TCCGAGGGTTCCCACGTGACGATCCGAGACTTGAGTTaGCTGCCCTCCACCCCTCGCCTGTCCTGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SEGSHVTIRDLS*LPSTPRLSCRR Trigger: GCGGCGGCAGGACAGGCGAGGGGTGGAGGGCAGCAAACTCAAGTCTCGGATCGTCACGTGGGAACCCTCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | GGCACAGGCCTGGGTTACTCCCGAGAGCTGCTGGAATaGCGGGCTGGACCAGTTAGCAGCTGGCAGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GTGLGYSRELLE*RAGPVSSWQLH Trigger: GTGGAGCTGCCAGCTGCTAACTGGTCCAGCCCGCCATTCCAGCAGCTCTCGGGAGTAACCCAGGCCTGTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | TTGGTGGCACAGGCCTGGGTTACTCCCGAGAGCTGCTaGAATGGCGGGCTGGACCAGTTAGCAGCTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVAQAWVTPESC*NGGLDQLAAGS Trigger: GCTGCCAGCTGCTAACTGGTCCAGCCCGCCATTCCAGCAGCTCTCGGGAGTAACCCAGGCCTGTGCCACCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 90 bp | TTCTTGATGAAGTCTTCCGAGGGTTCCCACGTGACGATCCGAGACTaGAGTTTGCTGCCCTCCACCCCTCGCCTGTCCTGCCGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: FLMKSSEGSHVTIRD*SLLPSTPRLSCRRR Trigger: GCGGCGGCGGCAGGACAGGCGAGGGGTGGAGGGCAGCAAACTCAAGTCTCGGATCGTCACGTGGGAACCCTCGGAAGACTTCATCAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 72 bp | CGACGCCGGGCTCGACGGAATGCTTCTAGCACGTTGTaGGTGGAACTCTGCTGGCTGAACCCTTCCAGACGG | + |
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Preference number: 6 (lower is better) Translates to: RRRARRNASSTL*VELCWLNPSRR Trigger: CCGTCTGGAAGGGTTCAGCCAGCAGAGTTCCACGCACAACGTGCTAGAAGCATTCCGTCGAGCCCGGCGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 72 bp | AAGTCTTCCGAGGGTTCCCACGTGACGATCCGAGACTaGAGTTTGCTGCCCTCCACCCCTCGCCTGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KSSEGSHVTIRD*SLLPSTPRLSC Trigger: GCAGGACAGGCGAGGGGTGGAGGGCAGCAAACTCAAGTCTCGGATCGTCACGTGGGAACCCTCGGAAGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | AGAACCTCCTTAGCTCTGCCACGAGACCCAGCTCCATaGGCCTCCATGTGGAGACAGTCAGGGTGTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: RTSLALPRDPAP*ASMWRQSGCGI Trigger: GATCCCACACCCTGACTGTCTCCACATGGAGGCCCATGGAGCTGGGTCTCGTGGCAGAGCTAAGGAGGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | TCCAAAGCGGCTCAGGCGCTCCCCCTTGAAGGTTCCTaGTATCCTCACATAGGATGGGTCCTCCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SKAAQALPLEGS*YPHIGWVLQLQ Trigger: CTGGAGCTGGAGGACCCATCCTATGTGAGGATACCAGGAACCTTCAAGGGGGAGCGCCTGAGCCGCTTTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | AAGCCCGGGACTGCTGCAGGCAGTGCAATCGGAAGGTaGCAGTACCCGTTGTCTCAGTGCGGAATCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: KPGTAAGSAIGR*QYPLSQCGIQS Trigger: GCTTTGGATTCCGCACTGAGACAACGGGTACTGTCACCTTCCGATTGCACTGCCTGCAGCAGTCCCGGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | CGGAATGCTTCTAGCACGTTGTGCGTGGAACTCTGCTaGCTGAACCCTTCCAGACGGTCCAACACACTCCGC | + |
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Preference number: 6 (lower is better) Translates to: RNASSTLCVELC*LNPSRRSNTLR Trigger: GCGGAGTGTGTTGGACCGTCTGGAAGGGTTCAGCCAGCAGAGTTCCACGCACAACGTGCTAGAAGCATTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | GTAGCCTTCCACACGATACCTCTGCCAGAAGTCCAGTaGGAGGACCTTACAGTAGAGCACAGGCCACTCCGG | + |
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Preference number: 6 (lower is better) Translates to: VAFHTIPLPEVQ*EDLTVEHRPLR Trigger: CCGGAGTGGCCTGTGCTCTACTGTAAGGTCCTCTCACTGGACTTCTGGCAGAGGTATCGTGTGGAAGGCTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 72 bp | TCCTCTTCTTCGTCAGGGCGGTGTCCACTAGCAGCTTaGGGAGGCCTAAAAGTGGCCAAGTCTATGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSGRCPLAA*GGLKVAKSMRS Trigger: GGACCTCATAGACTTGGCCACTTTTAGGCCTCCGCAAGCTGCTAGTGGACACCGCCCTGACGAAGAAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | GTCCTTGAACACTCGCTGCTCCCGCTCTTCCTCCTCTaGCTGTGCGAGGGAGGACACGTTGTCAATTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: VLEHSLLPLFLL*LCEGGHVVNCV Trigger: TACACAATTGACAACGTGTCCTCCCTCGCACAGCCAGAGGAGGAAGAGCGGGAGCAGCGAGTGTTCAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | AGAAATAGGCCACCTTGTCCATTCCCAGGGATTTGGTaGCACAGGCCTGGGTTACTCCCGAGAGCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RNRPPCPFPGIW*HRPGLLPRAAG Trigger: TCCAGCAGCTCTCGGGAGTAACCCAGGCCTGTGCCACCAAATCCCTGGGAATGGACAAGGTGGCCTATTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | CCTTCCAGACGGTCCAACACACTCCGCATCTGTTTCTaGAGGGAGTTCGATTCCATGAAAGCCCGGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: PSRRSNTLRICF*REFDSMKARDC Trigger: GCAGTCCCGGGCTTTCATGGAATCGAACTCCCTCCAGAAACAGATGCGGAGTGTGTTGGACCGTCTGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 72 bp | CTCCTCTTCTTCGTCAGGGCGGTGTCCACTAGCAGCTaGCGGAGGCCTAAAAGTGGCCAAGTCTATGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LLFFVRAVSTSS*RRPKSGQVYEV Trigger: GACCTCATAGACTTGGCCACTTTTAGGCCTCCGCAAGCTGCTAGTGGACACCGCCCTGACGAAGAAGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | ATGCTTCTAGCACGTTGTGCGTGGAACTCTGCTGGCTaGACCCTTCCAGACGGTCCAACACACTCCGCATCT | + |
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Preference number: 6 (lower is better) Translates to: MLLARCAWNSAG*TLPDGPTHSAS Trigger: AGATGCGGAGTGTGTTGGACCGTCTGGAAGGGTTCAGCCAGCAGAGTTCCACGCACAACGTGCTAGAAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS GCA 72 bp | TTCGATTCCATGAAAGCCCGGGACTGCTGCAGGCAGTaGAATCGGAAGGTGACAGTACCCGTTGTCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: FDSMKARDCCRQ*NRKVTVPVVSV Trigger: CACTGAGACAACGGGTACTGTCACCTTCCGATTGCACTGCCTGCAGCAGTCCCGGGCTTTCATGGAATCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 72 bp | ATGCCGGTGAAGTCAGGCTTCACTGTGATCACGCCATaGCTGTCCACCTTCAGGATGCAGAGCACGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: MPVKSGFTVITP*LSTFRMQSTCS Trigger: TGAGCACGTGCTCTGCATCCTGAAGGTGGACAGCAATGGCGTGATCACAGTGAAGCCTGACTTCACCGGCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 90 bp | CGCTGCTCCCGCTCTTCCTCCTCTGGCTGTGCGAGGGAGGACACGTaGTCAATTGTGTATTTCCAAGCAGAAGTGTGTTCCTGCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RCSRSSSSGCAREDT*SIVYFQAEVCSCFS Trigger: AGAGAAGCAGGAACACACTTCTGCTTGGAAATACACAATTGACAACGTGTCCTCCCTCGCACAGCCAGAGGAGGAAGAGCGGGAGCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 72 bp | TTTCCTGCCGCCAGAATTCTCCAGTTTCAAGATCTCTaGGCGGTACTGATGATCCAGTGGGCTCTGGCACGC | + |
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Preference number: 6 (lower is better) Translates to: FPAARILQFQDL*AVLMIQWALAR Trigger: GCGTGCCAGAGCCCACTGGATCATCAGTACCGCCAAGAGATCTTGAAACTGGAGAATTCTGGCGGCAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 90 bp | TCGCCGGTTTTTCCTGCCGCCAGAATTCTCCAGTTTCAAGATCTCTaGGCGGTACTGATGATCCAGTGGGCTCTGGCACGCGGATTCATT | + |
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Preference number: 6 (lower is better) Translates to: SPVFPAARILQFQDL*AVLMIQWALARGFI Trigger: AATGAATCCGCGTGCCAGAGCCCACTGGATCATCAGTACCGCCAAGAGATCTTGAAACTGGAGAATTCTGGCGGCAGGAAAAACCGGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 90 bp | GGTCCTTTGATGCCGGTGAAGTCAGGCTTCACTGTGATCACGCCATaGCTGTCCACCTTCAGGATGCAGAGCACGTGCTCATGTACCTTA | + |
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Preference number: 6 (lower is better) Translates to: GPLMPVKSGFTVITP*LSTFRMQSTCSCTL Trigger: TAAGGTACATGAGCACGTGCTCTGCATCCTGAAGGTGGACAGCAATGGCGTGATCACAGTGAAGCCTGACTTCACCGGCATCAAAGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | GGGCAGCAGGCTGGTAATGAAGGAAGTTGCTTGATGTaGTTCTTTGCAGATGAACTCGGAGGCGCAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: GQQAGNEGSCLM*FFADELGGAGC Trigger: GCAACCTGCGCCTCCGAGTTCATCTGCAAAGAATCACATCAAGCAACTTCCTTCATTACCAGCCTGCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | TCGCCATCCGCTCAGCCAGAAACGATGGCACCTCGCTaGCTGAAGTGGTTATTTTCTGACAGTACTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SPSAQPETMAPR*LKWLFSDSTLP Trigger: TGGAAGAGTACTGTCAGAAAATAACCACTTCAGCCAGCGAGGTGCCATCGTTTCTGGCTGAGCGGATGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 72 bp | CGCTCTTCCTCCTCTGGCTGTGCGAGGGAGGACACGTaGTCAATTGTGTATTTCCAAGCAGAAGTGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RSSSSGCAREDT*SIVYFQAEVCS Trigger: GGAACACACTTCTGCTTGGAAATACACAATTGACAACGTGTCCTCCCTCGCACAGCCAGAGGAGGAAGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | CATCTGGGCAGCAGGCTGGTAATGAAGGAAGTTGCTTaGTGTGATTCTTTGCAGATGAACTCGGAGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: HLGSRLVMKEVA*CDSLQMNSEAQ Trigger: CTGCGCCTCCGAGTTCATCTGCAAAGAATCACATCAAGCAACTTCCTTCATTACCAGCCTGCTGCCCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | CATCCGCTCAGCCAGAAACGATGGCACCTCGCTGGCTaGAGTGGTTATTTTCTGACAGTACTCTTCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: HPLSQKRWHLAG*SGYFLTVLFQV Trigger: GACTTGGAAGAGTACTGTCAGAAAATAACCACTTCAGCCAGCGAGGTGCCATCGTTTCTGGCTGAGCGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | CAGTTTCAAGATCTCTTGGCGGTACTGATGATCCAGTaGGCTCTGGCACGCGGATTCATTTTGGTACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QFQDLLAVLMIQ*ALARGFILVQV Trigger: GACCTGTACCAAAATGAATCCGCGTGCCAGAGCCCACTGGATCATCAGTACCGCCAAGAGATCTTGAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CCA 72 bp | GCTCAGCCAGAAACGATGGCACCTCGCTGGCTGAAGTaGTTATTTTCTGACAGTACTCTTCCAAGTCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: AQPETMAPRWLK*LFSDSTLPSRC Trigger: ACACCGACTTGGAAGAGTACTGTCAGAAAATAACCACTTCAGCCAGCGAGGTGCCATCGTTTCTGGCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 72 bp | CCTCCTCTGGCTGTGCGAGGGAGGACACGTTGTCAATaGTGTATTTCCAAGCAGAAGTGTGTTCCTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PPLAVRGRTRCQ*CISKQKCVPAS Trigger: AGAAGCAGGAACACACTTCTGCTTGGAAATACACAATTGACAACGTGTCCTCCCTCGCACAGCCAGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS CAA 72 bp | CTGATGATCCAGTGGGCTCTGGCACGCGGATTCATTTaGGTACAGGTCGACTTCAAACTGGCTAAAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LMIQWALARGFI*VQVDFKLAKEL Trigger: AAGCTCTTTAGCCAGTTTGAAGTCGACCTGTACCAAAATGAATCCGCGTGCCAGAGCCCACTGGATCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | CTTCCAAGTCGGTGTATCTATCCGAGTCAGTGTAAGTaGAGATTCGCCGGTTTTTCCTGCCGCCAGAATTCT | + |
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Preference number: 6 (lower is better) Translates to: LPSRCIYPSQCK*RFAGFSCRQNS Trigger: AGAATTCTGGCGGCAGGAAAAACCGGCGAATCTTCACTTACACTGACTCGGATAGATACACCGACTTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | AACGATGGCACCTCGCTGGCTGAAGTGGTTATTTTCTaGCAGTACTCTTCCAAGTCGGTGTATCTATCCGAG | + |
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Preference number: 6 (lower is better) Translates to: NDGTSLAEVVIF*QYSSKSVYLSE Trigger: CTCGGATAGATACACCGACTTGGAAGAGTACTGTCAGAAAATAACCACTTCAGCCAGCGAGGTGCCATCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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| CDS TCA 72 bp | CCGATTCGTCCTCATGCAGAAAGAAGGCTTCGAATGTaGACGGAAAGGAGAAATAGGCCACCTTGTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: PIRPHAERRLRM*TERRNRPPCPF Trigger: GAATGGACAAGGTGGCCTATTTCTCCTTTCCGTTCACATTCGAAGCCTTCTTTCTGCATGAGGACGAATCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038196.7 |
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