Pregenerated sensors for MKRN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000439Ensembl transcript IDs: ENSMUST00000000449.9
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCTTTCCAAGCGCGGTGCTCCACCTTTGGCAGCCTCCCACGTGCTaGATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCC | + |
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Preference number: 1 (lower is better) Translates to: GFPSAVLHLWQPPTC*ICLPGAAPMGWAAA Trigger: GGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCACCGCGCTTGGAAAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | CCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTaGCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: PPLAASHVLNLSSRS*PYGVGRGPTLSVAT Trigger: TGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | GGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATaGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: GSLPRAESVFQELPL*GGPRPNPICSHILV Trigger: GACAAGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | CCAGTACCACGTCACCTCGGGTCGGTGACAGATGCGTCCACACCGTaGCTTGGAAAGTTGACTGCAGAGCCAAATGAAGGCGTCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: PVPRHLGSVTDASTP*LGKLTAEPNEGVST Trigger: AGTGCTGACGCCTTCATTTGGCTCTGCAGTCAACTTTCCAAGGCACGGTGTGGACGCATCTGTCACCGACCCGAGGTGACGTGGTACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | AAACTGTGTCTAAGGTGTCCTGTGTGGATGGCTTTCCAAGCGCGGTaGTCCACCTTTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: KLCLRCPVWMAFQAR*STFGSLPRAESVFQ Trigger: CTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | ACTTGGCTCCTTGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTaGACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTTGGTACTA | + |
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Preference number: 1 (lower is better) Translates to: TWLLEPIWTVVQCQF*TWSPGHLGEPALVL Trigger: TAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCAAGGAGCCAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | CCTTGTTTCAGATCCTGTCTTCCATCGAGCTGCTTCAGCACTCTCTaGCGAAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGG | + |
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Preference number: 1 (lower is better) Translates to: PCFRSCLPSSCFSTL*RKSTGAPLSLPCIG Trigger: CCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTTCGGCAGAGAGTGCTGAAGCAGCTCGATGGAAGACAGGATCTGAAACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | AAGGTAGGGCACTCCGGCTGCTGCAGGGACATGCAATTGGGAACTTaGCTCCTTGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGC | + |
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Preference number: 1 (lower is better) Translates to: KVGHSGCCRDMQLGT*LLEPIWTVVQCQFC Trigger: GCAAAACTGGCACTGCACCACTGTCCATATAGGCTCAAGGAGCCAAGTTCCCAATTGCATGTCCCTGCAGCAGCCGGAGTGCCCTACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | GTATTTGTAGGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTaGTGCAGGGACATGCAATTGGGAACTTGGCTCCTTGAGCCTATA | + |
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Preference number: 1 (lower is better) Translates to: VFVGQVALEKVGHSG*CRDMQLGTWLLEPI Trigger: TATAGGCTCAAGGAGCCAAGTTCCCAATTGCATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTGCCCTACAAATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | GGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTaGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGACAAACTGT | + |
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Preference number: 1 (lower is better) Translates to: GQWCSASFAHGVLAT*GSLLWYYRTLWTNC Trigger: ACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | GCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTaGCCACCTGGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: AYMDSGAVPVLHMES*PPGGACFGTTELCG Trigger: TCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | GTGGGCCAGGATTGGGTCGGTGGAGAGAGGACCTCCACAAGCTCTTaGTATGGTTGGGGAGATACCAAGTTTCCAACTAATGAGACCACG | + |
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Preference number: 1 (lower is better) Translates to: VGQDWVGGERTSTSS*YGWGDTKFPTNETT Trigger: CGTGGTCTCATTAGTTGGAAACTTGGTATCTCCCCAACCATACCAAGAGCTTGTGGAGGTCCTCTCTCCACCGACCCAATCCTGGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | TGGAGTGGTTCTCAGCAGGTTGAACAGCCCACTGGCTCTGTGCTGTaGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTG | + |
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Preference number: 1 (lower is better) Translates to: WSGSQQVEQPTGSVL*MVRKLAPHNMMELL Trigger: CAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGCACAGAGCCAGTGGGCTGTTCAACCTGCTGAGAACCACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | GTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTaGATGGCTTTCCAAGCGCGGTGCTCCACCTTTGGCAGCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: VLQNFVDKLCLRCPV*MAFQARCSTFGSLP Trigger: TGGGAGGCTGCCAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR TCA 90 bp | CTGGACCACATAGCTGGTCCCGGAGAAAGGGGTTGGAGGTACAACTaGGAGCTCAACTCTAAATGTAGTGATTCTGTGGACGTGGTGATC | + |
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Preference number: 1 (lower is better) Translates to: LDHIAGPGERGWRYN*ELNSKCSDSVDVVI Trigger: GATCACCACGTCCACAGAATCACTACATTTAGAGTTGAGCTCTCAGTTGTACCTCCAACCCCTTTCTCCGGGACCAGCTATGTGGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | CACCACCCCTGCATCTTTCAAGTCTTTGATGGTAGCACTGATTGCTaGAATTCTGCCAGGGATGTGACACTTTTGGTTCCCATCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: HHPCIFQVFDGSTDC*NSARDVTLLVPIPG Trigger: GCCAGGGATGGGAACCAAAAGTGTCACATCCCTGGCAGAATTGCAGCAATCAGTGCTACCATCAAAGACTTGAAAGATGCAGGGGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR TCA 90 bp | ACAACTGAGAGCTCAACTCTAAATGTAGTGATTCTGTGGACGTGGTaGTCTCCCTTCCCTTCCCAGGGGGACTCACTACTGCACTCACAT | + |
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Preference number: 1 (lower is better) Translates to: TTESSTLNVVILWTW*SPFPSQGDSLLHSH Trigger: ATGTGAGTGCAGTAGTGAGTCCCCCTGGGAAGGGAAGGGAGATCACCACGTCCACAGAATCACTACATTTAGAGTTGAGCTCTCAGTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | GCTGCATCAATTCCAAGGCTCGACAACTCTATTAGAGATGATCACTaGAGAGGAGCCTTCTACAGGGCTGGCGATGTCTTGGCAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: AASIPRLDNSIRDDH*RGAFYRAGDVLARK Trigger: TTTCCTTGCCAAGACATCGCCAGCCCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAATAGAGTTGTCGAGCCTTGGAATTGATGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | TCCCTGGAGATCTTCACAACTGCACACACCTGTGACTTGAGACACTaGAAGGAACTCAATAGCCACCCTCACAGCTGTAAAAGTCTACAC | + |
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Preference number: 1 (lower is better) Translates to: SLEIFTTAHTCDLRH*KELNSHPHSCKSLH Trigger: GTGTAGACTTTTACAGCTGTGAGGGTGGCTATTGAGTTCCTTCCAGTGTCTCAAGTCACAGGTGTGTGCAGTTGTGAAGATCTCCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | TGTAAGATGGCACATGGCAGGGTGGTTAAACTCAGCTGTTCTGCATaGCCAATGAGCTATGCTTATTCGGTGGCCATGACCTCCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: CKMAHGRVVKLSCSA*PMSYAYSVAMTSFL Trigger: AAGAAAGGAGGTCATGGCCACCGAATAAGCATAGCTCATTGGCCATGCAGAACAGCTGAGTTTAACCACCCTGCCATGTGCCATCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | AGGCCACTGTTAGAAATAGCATCTCCTTACCAACTGCACCTTTCATaGTGTAAGATGGCACATGGCAGGGTGGTTAAACTCAGCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RPLLEIASPYQLHLS*CKMAHGRVVKLSCS Trigger: AGAACAGCTGAGTTTAACCACCCTGCCATGTGCCATCTTACAGCATGAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAACAGTGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR TCA 90 bp | TGCCTTCCCACTTCTGGGTTTGTCTTGGATAGGCAGAATGTGAGGTaGAATGCCTGGCTTGGTTTGCAGAGCAAATCCAAGTTTCAATAT | + |
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Preference number: 1 (lower is better) Translates to: CLPTSGFVLDRQNVR*NAWLGLQSKSKFQY Trigger: ATATTGAAACTTGGATTTGCTCTGCAAACCAAGCCAGGCATTTCACCTCACATTCTGCCTATCCAAGACAAACCCAGAAGTGGGAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | CTTAGACAGAGGAGTGACTGCTCCTGTTTACCACAAAAACAAGTGTaGAGCCTACTACTTTATAGGGGAGAACAAGCAATCTGTGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: LRQRSDCSCLPQKQV*SLLLYRGEQAICES Trigger: GGACTCACAGATTGCTTGTTCTCCCCTATAAAGTAGTAGGCTCCACACTTGTTTTTGTGGTAAACAGGAGCAGTCACTCCTCTGTCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | AGTGCTTCGTTCTGTCTTAAAGTCATGCAGAAGCCAGATAGGTGGTaGATATCTTTAATCCCAGCATTCAAGAGGCAAGTTGCATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: SASFCLKVMQKPDRW*ISLIPAFKRQVASL Trigger: CAGAGATGCAACTTGCCTCTTGAATGCTGGGATTAAAGATATGCACCACCTATCTGGCTTCTGCATGACTTTAAGACAGAACGAAGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | CAAATTTGCTCTTTCTTGCCCCCAGTTCTTAGACAGAGGAGTGACTaGTCCTGTTTACCACAAAAACAAGTGTGGAGCCTACTACTTTAT | + |
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Preference number: 1 (lower is better) Translates to: QICSFLPPVLRQRSD*SCLPQKQVWSLLLY Trigger: ATAAAGTAGTAGGCTCCACACTTGTTTTTGTGGTAAACAGGAGCAGTCACTCCTCTGTCTAAGAACTGGGGGCAAGAAAGAGCAAATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CCA 90 bp | TTCCTTCTGAGGCGATACACACTTGAAATAGACTTGAACTCAGCCTaGTTAGATTATCCAGAATATAGCTTGAGAAGGTTATTGCATCTA | + |
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Preference number: 1 (lower is better) Translates to: FLLRRYTLEIDLNSA*LDYPEYSLRRLLHL Trigger: TAGATGCAATAACCTTCTCAAGCTATATTCTGGATAATCTAACCAGGCTGAGTTCAAGTCTATTTCAAGTGTGTATCGCCTCAGAAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR GCA 90 bp | TGGAGAGTTAAAGGTTTACTGTTGATCTTTCTAATCAAAAGCAATTaGTTCTGGTGGTCCTTATGGACAGATACCAAAGAAAAAGGCATT | + |
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Preference number: 1 (lower is better) Translates to: WRVKGLLLIFLIKSN*FWWSLWTDTKEKGI Trigger: AATGCCTTTTTCTTTGGTATCTGTCCATAAGGACCACCAGAAGCAATTGCTTTTGATTAGAAAGATCAACAGTAAACCTTTAACTCTCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR GCA 90 bp | CTACGCCCACATCAACAACCGAGACCAGGTGATCTGCATGGCCGGGCGACACAGCTGTCTTCCAGGAGCTaGCCCTATGGGGTGGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: LRPHQQPRPGDLHGRATQLSSRS*PYGVGR Trigger: GCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAG...CTGTGTCGCCCGGCCATGCAGATCACCTGGTCTCGGTTGTTGATGTGGGCGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR CCA 90 bp | AATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTGCTGGACCACATAGCTaGTCCCGGAGAAAGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: NLSSRSCPYGVGRGPTLSAGPHS*SRRKGL Trigger: CAACCCCTTTCTCCGGGACCAGCTATGTGGTCCAGC...AGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR CCA 90 bp | CTACGCCCACATCAACAACCGAGACCAGGTGATCTGCATGGCCGGGCGACACAGGGTGTCCTGTGTGGATaGCTTTCCAAGCGCGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LRPHQQPRPGDLHGRATQGVLCG*LSKRGA Trigger: AGCACCGCGCTTGGAAAGCCATCCACACAGGACACC...CTGTGTCGCCCGGCCATGCAGATCACCTGGTCTCGGTTGTTGATGTGGGCGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR CCA 90 bp | CTACGCCCACATCAACAACCGAGACCAGGTGATCTGCATGGCCGGGCGACACAGGTCCACACCGTGCCTTaGAAAGTTGACTGCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LRPHQQPRPGDLHGRATQVHTVP*KVDCRA Trigger: GGCTCTGCAGTCAACTTTCCAAGGCACGGTGTGGAC...CTGTGTCGCCCGGCCATGCAGATCACCTGGTCTCGGTTGTTGATGTGGGCGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCTTGCACATGGAGTCCTaGCCACCTGGGGGAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VLWMVRKLAPHNMMELLGLHMES*PPGGAC Trigger: GCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAA...GCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CAA 90 bp | GCCTTGGAGAAGGTAGGGCACTCCGGCTGCTGCAGGGACATGCAATaGGGAACTTGGCTCCTTGAGCCTATATGGACAGTGGTGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: ALEKVGHSGCCRDMQ*GTWLLEPIWTVVQC Trigger: GCACTGCACCACTGTCCATATAGGCTCAAGGAGCCAAGTTCCCAATTGCATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CAA 90 bp | GGCACTCCGGCTGCTGCAGGGACATGCAATTGGGAACTTGGCTCCTaGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTGCACATGGA | + |
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Preference number: 2 (lower is better) Translates to: GTPAAAGTCNWELGS*SLYGQWCSASFAHG Trigger: TCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCAAGGAGCCAAGTTCCCAATTGCATGTCCCTGCAGCAGCCGGAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR GCA 90 bp | CTACGCCCACATCAACAACCGAGACCAGGTGATCTGCATGGCCGGGCGACACAGATTAGAGATGATCACTaGAGAGGAGCCTTCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: LRPHQQPRPGDLHGRATQIRDDH*RGAFYR Trigger: CCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAAT...CTGTGTCGCCCGGCCATGCAGATCACCTGGTCTCGGTTGTTGATGTGGGCGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR GCA 90 bp | AAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGTGGACAGTGGTGCAGTaGCAGTTTTGCACATGGAGT | + |
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Preference number: 2 (lower is better) Translates to: KINRSASEPSLHRAAHTEWTVVQ*QFCTWS Trigger: ACTCCATGTGCAAAACTGGCACTGCACCACTGTCCA...CTCAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR GCA 90 bp | CTACGCCCACATCAACAACCGAGACCAGGTGATCTGCATGGCCGGGCGACACAGGACTCCTTCAAAACTTaGAGTGCAGTTTCTTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: LRPHQQPRPGDLHGRATQDSFKT*SAVSCA Trigger: TGCACAAGAAACTGCACTGCAAGTTTTGAAGGAGTC...CTGTGTCGCCCGGCCATGCAGATCACCTGGTCTCGGTTGTTGATGTGGGCGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCCACTCCTGCCCTGGAAATaGAAGCTGTCCACCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: AVDGEEAGPTQHDGITGPLLPWK*KLSTKK Trigger: TTTCTTGGTGGACAGCTTCCATTTCCAGGGCAGGAG...TGGCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CAA 90 bp | TGCCAGTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTaGGTACTACAGAACTTTGTGGACAAACTGTGTCTAAGGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CQFCTWSPGHLGEPA*VLQNFVDKLCLRCP Trigger: AGGACACCTTAGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CAA 90 bp | GTTGGGGAGATACCAAGTTTCCAACTAATGAGACCACGTGGGGCCTaGTTTCAGATCCTGTCTTCCATCGAGCTGCTTCAGCACTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VGEIPSFQLMRPRGA*FQILSSIELLQHSL Trigger: CAGAGAGTGCTGAAGCAGCTCGATGGAAGACAGGATCTGAAACAAGGCCCCACGTGGTCTCATTAGTTGGAAACTTGGTATCTCCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR GCA 90 bp | TCTATTAGAGATGATCACTGCAGAGGAGCCTTCTACAGGGCTGGCGATGTCTTGAGGGGGACTCACTACTaGACTCACATCCCAGTACCA | + |
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Preference number: 2 (lower is better) Translates to: SIRDDHCRGAFYRAGDVLRGTHY*THIPVP Trigger: TGGTACTGGGATGTGAGTGCAGTAGTGAGTCCCCCT...CAAGACATCGCCAGCCCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAATAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR GCA 90 bp | AAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGGCCTTAACTTCATATTaGCTTCTTTTCTACCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: KINRSASEPSLHRAAHTEALTSY*LLFYPS Trigger: GGAGGGGTAGAAAAGAAGGCAATATGAAGTTAAGGC...CTCAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR CCA 90 bp | CATCTTAGAACCAGTATCCCAGAATTCCAGAAATTTCAAAATGGCTACTTTCTGCAGGAGCTGCCCCTATaGGGTGGGCCGCGGCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: HLRTSIPEFQKFQNGYFLQELPL*GGPRPN Trigger: GTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTG...CAGAAAGTAGCCATTTTGAAATTTCTGGAATTCTGGGATACTGGTTCTAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR CAA 90 bp | GATGGTAGCACTGATTGCTGCAATTCTGCCAGGGATGTGACACTTTaGGTTCCCATCCCTGGCAGAGACCCTGCTAAAGGCTTCCATTTA | + |
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Preference number: 2 (lower is better) Translates to: DGSTDCCNSARDVTL*VPIPGRDPAKGFHL Trigger: TAAATGGAAGCCTTTAGCAGGGTCTCTGCCAGGGATGGGAACCAAAAGTGTCACATCCCTGGCAGAATTGCAGCAATCAGTGCTACCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCAGACAGAGGAGTGACTaGTCCTGTTTACCACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: VLWMVRKLAPHNMMELLGRQRSD*SCLPQK Trigger: TTTTTGTGGTAAACAGGAGCAGTCACTCCTCTGTCT...GCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCACAGCAGCACCAATATaGCCAAATGTGTTCTCACTA | + |
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Preference number: 2 (lower is better) Translates to: VLWMVRKLAPHNMMELLGTAAPI*PNVFSL Trigger: TAGTGAGAACACATTTGGCCATATTGGTGCTGCTGT...GCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCCTAGAGGCCACTGTTAGAAATAGCATCTCCTTACCAACTGCACCTTTCAAGGGGAGGGTAAGATaGAGTCTCCCTGGAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: VSLEATVRNSISLPTAPFKGRVR*SLPGDL Trigger: AAGATCTCCAGGGAGACTCCATCTTACCCTCCCCTT...GAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAACAGTGGCCTCTAGGCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGCTGTGCTGTGGATGGTaGGGAAGCTGGCCCCACACA | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKLCCGW*GSWPHT Trigger: TGTGTGGGGCCAGCTTCCTCACCATCCACAGCACAG...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTTCTTAAGGTCTCCTGGAATTAGCATCTTAGAACCAGTATCCCAGAATTCCGCTTTCCAAGCGCGGTaGTCCACCTTTGGCAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: YFLRSPGISILEPVSQNSAFQAR*STFGSL Trigger: GAGGCTGCCAAAGGTGGAGCACCGCGCTTGGAAAGC...GGAATTCTGGGATACTGGTTCTAAGATGCTAATTCCAGGAGACCTTAAGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCTTAGAACCAGTATCCCAGAATTCCAGAAATTTCAAAATGGCTACTTTCTGGGAGTCCTGGCCACCTaGGGGAGCCTGCTTTGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: HLRTSIPEFQKFQNGYFLGVLAT*GSLLWY Trigger: GTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCC...CAGAAAGTAGCCATTTTGAAATTTCTGGAATTCTGGGATACTGGTTCTAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGGTGGGGCCCTGTAATTaGGTGTGCGCATGCCATCGT | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKVGPCN*VCACHR Trigger: ACGATGGCATGCGCACACTCAATTACAGGGCCCCAC...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCTTAGAACCAGTATCCCAGAATTCCAGAAATTTCAAAATGGCTACTTTCTGGTACGAGCTGATGGCTaGGGAGCTTCCCTACGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HLRTSIPEFQKFQNGYFLVRADG*GASLRP Trigger: TGGGCGTAGGGAAGCTCCCCAGCCATCAGCTCGTAC...CAGAAAGTAGCCATTTTGAAATTTCTGGAATTCTGGGATACTGGTTCTAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | TATTTCTTAAGGTCTCCTGGAATTAGCATCTTAGAACCAGTATCCCAGAATTCCATTCTGTGGACGTGGTaGTCTCCCTTCCCTTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: YFLRSPGISILEPVSQNSILWTW*SPFPSQ Trigger: CTGGGAAGGGAAGGGAGATCACCACGTCCACAGAAT...GGAATTCTGGGATACTGGTTCTAAGATGCTAATTCCAGGAGACCTTAAGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTGTGCAGACAGAACTCAAGGAGCCCCCTCTGCAGTTCATGAACAACCAAGTAAATTTGCTCTTTCTTaGCCCCAGTTCTTAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SCADRTQGAPSAVHEQPSKFALS*PQFLDR Trigger: TCTGTCTAAGAACTGGGGGCAAGAAAGAGCAAATTT...ACTTGGTTGTTCATGAACTGCAGAGGGGGCTCCTTGAGTTCTGTCTGCACAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGGCTGCTGCAGGGACATaGAATTGGGAACTTGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKAAAGT*NWELGS Trigger: GGAGCCAAGTTCCCAATTGCATGTCCCTGCAGCAGC...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 90 bp | GGGCTGGAATCAGTTGTAAGCTGCCTGACACCCAAACTGTCTCTTTaGATTATCCATTTTCTTTCAAAGGTCATCTCTAGGGTCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLESVVSCLTPKLSL*IIHFLSKVISRVSA Trigger: AGCAGAGACCCTAGAGATGACCTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTACAACTGATTCCAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | TATTTCTTAAGGTCTCCTGGAATTAGCATCTTAGAACCAGTATCCCAGAATTCCTCAATGCTTGCACGCTaGCTACATCCCCAAGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: YFLRSPGISILEPVSQNSSMLAR*LHPQGY Trigger: GTAGCCTTGGGGATGTAGTCAGCGTGCAAGCATTGA...GGAATTCTGGGATACTGGTTCTAAGATGCTAATTCCAGGAGACCTTAAGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGTCAGTAGCTACACATCGTATATCAGGAAGTATGCTAATTGCTCAAGTAAGGCTTTTCTACCCCTCCTaGCCTGGAAATGGAAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RSVATHRISGSMLIAQVRLFYPS*PGNGSC Trigger: ACAGCTTCCATTTCCAGGGCAGGAGGGGTAGAAAAG...CCTTACTTGAGCAATTAGCATACTTCCTGATATACGATGTGTAGCTACTGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | TATTTCTTAAGGTCTCCTGGAATTAGCATCTTAGAACCAGTATCCCAGAATTCCCGTGCCTTGGAAAGTTaGCTGCAGAGCCAAATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YFLRSPGISILEPVSQNSRALES*LQSQMK Trigger: CTTCATTTGGCTCTGCAGTCAACTTTCCAAGGCACG...GGAATTCTGGGATACTGGTTCTAAGATGCTAATTCCAGGAGACCTTAAGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | TATTTCTTAAGGTCTCCTGGAATTAGCATCTTAGAACCAGTATCCCAGAATTCCAACTGCACACACCTGTaGCTTGAGACACTGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: YFLRSPGISILEPVSQNSNCTHL*LETLEG Trigger: TCCTTCCAGTGTCTCAAGTCACAGGTGTGTGCAGTT...GGAATTCTGGGATACTGGTTCTAAGATGCTAATTCCAGGAGACCTTAAGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGGTTCTGCATGGCCAATaGGCTATGCTTATTCGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKVLHGQ*AMLIRW Trigger: CCACCGAATAAGCATAGCTCATTGGCCATGCAGAAC...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGAGGCAGAATGTGAGGTaGAATGCCTGGCTTGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKRQNVR*NAWLGL Trigger: CAAACCAAGCCAGGCATTTCACCTCACATTCTGCCT...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | AACTCAGCCTGGTTAGATTATCCAGAATATAGCTTGAGAAGGTTATTGCATCTAGTGATTGCTGCCTCCTaGTCACTTTTCAGACCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: NSAWLDYPEYSLRRLLHLVIAAS*SLFRPA Trigger: TGCTGGTCTGAAAAGTGAGCAGGAGGCAGCAATCAC...TAGATGCAATAACCTTCTCAAGCTATATTCTGGATAATCTAACCAGGCTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGGAATGTGAGGTGAAATaGCTGGCTTGGTTTGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKECEVK*LAWFAE Trigger: CTCTGCAAACCAAGCCAGGCATTTCACCTCACATTC...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTGAAGTGAAGGAGGCCAGAAGCACTGTTATAAACAGTATAAACTGTCAGTCTCTTGAACTTCCTTCCTaGCTAGTTAAAATAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SEVKEARSTVINSINCQSLELPS*LVKIAW Trigger: CCAGGCTATTTTAACTAGTCAGGAAGGAAGTTCAAG...AGACTGACAGTTTATACTGTTTATAACAGTGCTTCTGGCCTCCTTCACTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAGCCTGGTTAGATTATCCAGAATATAGCTTGAGAAGGTTATTGCATCTACCAGGGGAAACAGTTTaGAGGCCCACTGTAACTATT | + |
|
Preference number: 2 (lower is better) Translates to: NSAWLDYPEYSLRRLLHLPGETV*RPTVTI Trigger: AATAGTTACAGTGGGCCTTCAAACTGTTTCCCCTGG...TAGATGCAATAACCTTCTCAAGCTATATTCTGGATAATCTAACCAGGCTGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGGGTTCAGGACAAATTTaGTCTTTCTTGCCCCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKGSGQI*SFLPPV Trigger: AACTGGGGGCAAGAAAGAGCAAATTTGTCCTGAACC...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CCA 90 bp | AACTCAGCCTGGTTAGATTATCCAGAATATAGCTTGAGAAGGTTATTGCATCTAGTTCCTCAATGTCTCTaGAGGTCATTCCCTAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: NSAWLDYPEYSLRRLLHLVPQCL*RSFPRD Trigger: ATCCCTAGGGAATGACCTCCAGAGACATTGAGGAAC...TAGATGCAATAACCTTCTCAAGCTATATTCTGGATAATCTAACCAGGCTGAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGCATCTCCTTACCAACTaGACCTTTCATGCTGTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKHLLTN*TFHAVR Trigger: TCTTACAGCATGAAAGGTGCAGTTGGTAAGGAGATG...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGCAAGTCATAAGTGATTaGTGCCTCCTGCTCACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKQVISD*CLLLTF Trigger: AAAAGTGAGCAGGAGGCAGCAATCACTTATGACTTG...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CCA 90 bp | AACTCAGCCTGGTTAGATTATCCAGAATATAGCTTGAGAAGGTTATTGCATCTACTCAGCTGTTCTGCATaGCCAATGAGCTATGCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: NSAWLDYPEYSLRRLLHLLSCSA*PMSYAY Trigger: ATAAGCATAGCTCATTGGCCATGCAGAACAGCTGAG...TAGATGCAATAACCTTCTCAAGCTATATTCTGGATAATCTAACCAGGCTGAGTT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 90 bp | TTTCTTATAAAAATAAATTCAGGTTCAGGACAAATTTGCTCTTTCTaGCCCCCAGTTCTTAGACAGAGGAGTGACTGCTCCTGTTTACCA | + |
|
Preference number: 2 (lower is better) Translates to: FLIKINSGSGQICSF*PPVLRQRSDCSCLP Trigger: TGGTAAACAGGAGCAGTCACTCCTCTGTCTAAGAACTGGGGGCAAGAAAGAGCAAATTTGTCCTGAACCTGAATTTATTTTTATAAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCTTAGAACCAGTATCCCAGAATTCCAGAAATTTCAAAATGGCTACTTTCTGATGAAGGCCTCACGGTaGAAATTGGAGATTTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: HLRTSIPEFQKFQNGYFLMKASR*KLEILV Trigger: AACCAAAATCTCCAATTTTCACCGTGAGGCCTTCAT...CAGAAAGTAGCCATTTTGAAATTTCTGGAATTCTGGGATACTGGTTCTAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CCA 90 bp | AACTCAGCCTGGTTAGATTATCCAGAATATAGCTTGAGAAGGTTATTGCATCTAGTTATGACACAAGGCTaGAGAGTTAAAGGTTTACTG | + |
|
Preference number: 2 (lower is better) Translates to: NSAWLDYPEYSLRRLLHLVMTQG*RVKGLL Trigger: CAGTAAACCTTTAACTCTCCAGCCTTGTGTCATAAC...TAGATGCAATAACCTTCTCAAGCTATATTCTGGATAATCTAACCAGGCTGAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | GCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTaGCCCTATGGGGTGGGCCGCGGCCCAACCCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: AASHVLNLSSRS*PYGVGRGPTLS Trigger: AGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | AGCGCGGTGCTCCACCTTTGGCAGCCTCCCACGTGCTaGATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SAVLHLWQPPTC*ICLPGAAPMGW Trigger: CCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAAAGGTGGAGCACCGCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | CCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATaGGGTGGGCCGCGGCCCAACCCTATCTGTAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PRAESVFQELPL*GGPRPNPICSH Trigger: GTGGCTACAGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | CCGACGTGTACTCGTACGGCATCGTGCTGTACGAGCTaGTGGCTGGGGAGCTTCCCTACGCCCACATCAACA | + |
|
Preference number: 3 (lower is better) Translates to: PTCTRTASCCTS*WLGSFPTPTST Trigger: TGTTGATGTGGGCGTAGGGAAGCTCCCCAGCCATCAGCTCGTACAGCACGATGCCGTACGAGTACACGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | GGGCAAGTGGCCTTGGAGAAGGTAGGGCACTCCGGCTaGTGCAGGGACATGCAATTGGGAACTTGGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GQVALEKVGHSG*CRDMQLGTWLL Trigger: AAGGAGCCAAGTTCCCAATTGCATGTCCCTGCAGCAGCCGGAGTGCCCTACCTTCTCCAAGGCCACTTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | CCCTACGCCCACATCAACAACCGAGACCAGGTGATCTaGATGGCCGGGCGACACAGTGAGGGGCTACTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PYAHINNRDQVI*MAGRHSEGLLS Trigger: ACTAAGTAGCCCCTCACTGTGTCGCCCGGCCATGCAGATCACCTGGTCTCGGTTGTTGATGTGGGCGTAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | CGTCACCTCGGGTCGGTGACAGATGCGTCCACACCGTaGCTTGGAAAGTTGACTGCAGAGCCAAATGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RHLGSVTDASTP*LGKLTAEPNEG Trigger: GCCTTCATTTGGCTCTGCAGTCAACTTTCCAAGGCACGGTGTGGACGCATCTGTCACCGACCCGAGGTGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | CTTGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTTaGACATGGAGTCCTGGCCACCTGGGGGAGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LEPIWTVVQCQF*TWSPGHLGEPA Trigger: AGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTAGGTTCAGGACAAATTaGCTCTTTCTTGCCCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: NLSSRSCPYGVGRGPTLSRFRTN*LFLAPS Trigger: ACTGGGGGCAAGAAAGAGCAAATTTGTCCTGAACCT...AGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | ACTTGGCTCCTTGAGCCTATATGGACAGTGGTGCAGTaGCAGTTTTGCACATGGAGTCCTGGCCACCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TWLLEPIWTVVQ*QFCTWSPGHLG Trigger: CCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCAAGGAGCCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | GACAGTGGTGCAGTGCCAGTTTTGCACATGGAGTCCTaGCCACCTGGGGGAGCCTGCTTTGGTACTACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DSGAVPVLHMES*PPGGACFGTTE Trigger: TTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | CACTCCGGCTGCTGCAGGGACATGCAATTGGGAACTTaGCTCCTTGAGCCTATATGGACAGTGGTGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HSGCCRDMQLGT*LLEPIWTVVQC Trigger: GCACTGCACCACTGTCCATATAGGCTCAAGGAGCCAAGTTCCCAATTGCATGTCCCTGCAGCAGCCGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | TCTCAGCAGGTTGAACAGCCCACTGGCTCTGTGCTGTaGATGGTGAGGAAGCTGGCCCCACACAACATGATG | + |
|
Preference number: 3 (lower is better) Translates to: SQQVEQPTGSVL*MVRKLAPHNMM Trigger: CATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGCACAGAGCCAGTGGGCTGTTCAACCTGCTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | TGGGAACTTGGCTCCTTGAGCCTATATGGACAGTGGTaGAGTGCCAGTTTTGCACATGGAGTCCTGGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: WELGSLSLYGQW*SASFAHGVLAT Trigger: GGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCACCACTGTCCATATAGGCTCAAGGAGCCAAGTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | CTGCATCGGGCAGCTCACACTGAGGACATCAATGCTTaGACGCTGACTACATCCCCAAGGCTACCAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LHRAAHTEDINA*TLTTSPRLPVF Trigger: GAAGACTGGTAGCCTTGGGGATGTAGTCAGCGTGCAAGCATTGATGTCCTCAGTGTGAGCTGCCCGATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | AGATCCTGTCTTCCATCGAGCTGCTTCAGCACTCTCTaGCGAAAATCAACAGGAGCGCCTCTGAGCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RSCLPSSCFSTL*RKSTGAPLSLP Trigger: GGGAAGGCTCAGAGGCGCTCCTGTTGATTTTCGGCAGAGAGTGCTGAAGCAGCTCGATGGAAGACAGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | AATCCAGCTCACAGCCATCCCCGGCCTCTGACAATCTaGCTTCCCACTTCTGGGTTTGTCTTGGATAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NPAHSHPRPLTI*LPTSGFVLDRQ Trigger: CTGCCTATCCAAGACAAACCCAGAAGTGGGAAGGCAGATTGTCAGAGGCCGGGGATGGCTGTGAGCTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | TGCAGTGCCAGTTTTGCACATGGAGTCCTGGCCACCTaGGGGAGCCTGCTTTGGTACTACAGAACTTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSASFAHGVLAT*GSLLWYYRTLW Trigger: CCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAACTGGCACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGCCGTGCCTTGGAAAGTaGACTGCAGAGCCAAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: KINRSASEPSLHRAAHTEPCLGK*TAEPNE Trigger: TTCATTTGGCTCTGCAGTCAACTTTCCAAGGCACGG...CTCAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | CCCATGGTGTGGAGTGACCAGGTGACCACCAGGCAGTaGTCTTTAGCTTTGTTTCCCAAGTGCCCTTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: PMVWSDQVTTRQ*SLALFPKCPYG Trigger: ACCATAAGGGCACTTGGGAAACAAAGCTAAAGAGCACTGCCTGGTGGTCACCTGGTCACTCCACACCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | TCAAAGGTCATCTCTAGGGTCTCTGCTCCCATGGTGTaGAGTGACCAGGTGACCACCAGGCAGTGCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SKVISRVSAPMV*SDQVTTRQCSL Trigger: TAAAGAGCACTGCCTGGTGGTCACCTGGTCACTCCACACCATGGGAGCAGAGACCCTAGAGATGACCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | GTTTTGCACATGGAGTCCTGGCCACCTGGGGGAGCCTaGTTTGGTACTACAGAACTTTGTGGACAAACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLHMESWPPGGA*FGTTELCGQTV Trigger: CACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | AACTTTGTGGACAAACTGTGTCTAAGGTGTCCTGTGTaGATGGCTTTCCAAGCGCGGTGCTCCACCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NFVDKLCLRCPV*MAFQARCSTFG Trigger: GCCAAAGGTGGAGCACCGCGCTTGGAAAGCCATCCACACAGGACACCTTAGACACAGTTTGTCCACAAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | GCACATGGCAGGGTGGTTAAACTCAGCTGTTCTGCATaGCCAATGAGCTATGCTTATTCGGTGGCCATGACC | + |
|
Preference number: 3 (lower is better) Translates to: AHGRVVKLSCSA*PMSYAYSVAMT Trigger: GGTCATGGCCACCGAATAAGCATAGCTCATTGGCCATGCAGAACAGCTGAGTTTAACCACCCTGCCATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGTGCAGACAGAACTCAAGGAGCCCCCTCTGCAGTTCATGAACAACCAAGTGCACACACCTGTGACTaGAGACACTGGAAGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: SCADRTQGAPSAVHEQPSAHTCD*RHWKEL Trigger: GAGTTCCTTCCAGTGTCTCAAGTCACAGGTGTGTGC...ACTTGGTTGTTCATGAACTGCAGAGGGGGCTCCTTGAGTTCTGTCTGCACAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | AGCTCAACTCTAAATGTAGTGATTCTGTGGACGTGGTaGTCTCCCTTCCCTTCCCAGGGGGACTCACTACTG | + |
|
Preference number: 3 (lower is better) Translates to: SSTLNVVILWTW*SPFPSQGDSLL Trigger: CAGTAGTGAGTCCCCCTGGGAAGGGAAGGGAGATCACCACGTCCACAGAATCACTACATTTAGAGTTGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | CCCTGGAGATCTTCACAACTGCACACACCTGTGACTTaGGACACTGGAAGGAACTCAATAGCCACCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: PWRSSQLHTPVT*DTGRNSIATLT Trigger: TGTGAGGGTGGCTATTGAGTTCCTTCCAGTGTCTCAAGTCACAGGTGTGTGCAGTTGTGAAGATCTCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | ATATTGCCTTCTTTTCTACCCCTCCTGCCCTGGAAATaGAAGCTGTCCACCAAGAAAGCCTGCTCAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILPSFLPLLPWK*KLSTKKACSAP Trigger: TGGAGCTGAGCAGGCTTTCTTGGTGGACAGCTTCCATTTCCAGGGCAGGAGGGGTAGAAAAGAAGGCAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | GGTGGAGAGAGGACCTCCACAAGCTCTTGGTATGGTTaGGGAGATACCAAGTTTCCAACTAATGAGACCACG | + |
|
Preference number: 3 (lower is better) Translates to: GGERTSTSSWYG*GDTKFPTNETT Trigger: CGTGGTCTCATTAGTTGGAAACTTGGTATCTCCCCAACCATACCAAGAGCTTGTGGAGGTCCTCTCTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | GAAAGCCTGCTCAGCTCCAGAGGTATACAAGTCAGCTaGGTATTTGTAGGGCAAGTGGCCTTGGAGAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ESLLSSRGIQVS*VFVGQVALEKV Trigger: TACCTTCTCCAAGGCCACTTGCCCTACAAATACTCAGCTGACTTGTATACCTCTGGAGCTGAGCAGGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | TTTGACAGCATTTCTGCACAGCCATGGGGGTCTGGTTaGTCTGTGGTGTCAGTTAGCTTAAGGCAAAACCGC | + |
|
Preference number: 3 (lower is better) Translates to: FDSISAQPWGSG*SVVSVSLRQNR Trigger: GCGGTTTTGCCTTAAGCTAACTGACACCACAGATCAACCAGACCCCCATGGCTGTGCAGAAATGCTGTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | ATTCCAAGGCTCGACAACTCTATTAGAGATGATCACTaGAGAGGAGCCTTCTACAGGGCTGGCGATGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IPRLDNSIRDDH*RGAFYRAGDVL Trigger: CAAGACATCGCCAGCCCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAATAGAGTTGTCGAGCCTTGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCAGTAGCTACACATCGTATATCAGGAAGTATGCTAATTGCTCAAGTAAGGGTAGGGCAAGTGGCCTaGGAGAAGGTAGGGCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: RSVATHRISGSMLIAQVRVGQVA*EKVGHS Trigger: GGAGTGCCCTACCTTCTCCAAGGCCACTTGCCCTAC...CCTTACTTGAGCAATTAGCATACTTCCTGATATACGATGTGTAGCTACTGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | ATAGCTGGTCCCGGAGAAAGGGGTTGGAGGTACAACTaGGAGCTCAACTCTAAATGTAGTGATTCTGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IAGPGERGWRYN*ELNSKCSDSVD Trigger: GTCCACAGAATCACTACATTTAGAGTTGAGCTCTCAGTTGTACCTCCAACCCCTTTCTCCGGGACCAGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | CATCTCCTTACCAACTGCACCTTTCATGCTGTAAGATaGCACATGGCAGGGTGGTTAAACTCAGCTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HLLTNCTFHAVR*HMAGWLNSAVL Trigger: CAGAACAGCTGAGTTTAACCACCCTGCCATGTGCCATCTTACAGCATGAAAGGTGCAGTTGGTAAGGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | ACTTCTGGGTTTGTCTTGGATAGGCAGAATGTGAGGTaGAATGCCTGGCTTGGTTTGCAGAGCAAATCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSGFVLDRQNVR*NAWLGLQSKSK Trigger: CTTGGATTTGCTCTGCAAACCAAGCCAGGCATTTCACCTCACATTCTGCCTATCCAAGACAAACCCAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | TTCCCACTTCTGGGTTTGTCTTGGATAGGCAGAATGTaGGGTGAAATGCCTGGCTTGGTTTGCAGAGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FPLLGLSWIGRM*GEMPGLVCRAN Trigger: ATTTGCTCTGCAAACCAAGCCAGGCATTTCACCTCACATTCTGCCTATCCAAGACAAACCCAGAAGTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | TCTTTCTTGCCCCCAGTTCTTAGACAGAGGAGTGACTaGTCCTGTTTACCACAAAAACAAGTGTGGAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SFLPPVLRQRSD*SCLPQKQVWSL Trigger: TAGGCTCCACACTTGTTTTTGTGGTAAACAGGAGCAGTCACTCCTCTGTCTAAGAACTGGGGGCAAGAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | CATCTGTCTTCTGTACTGGCCATGAATCACCACCCCTaGATCTTTCAAGTCTTTGATGGTAGCACTGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLSSVLAMNHHP*IFQVFDGSTDC Trigger: GCAATCAGTGCTACCATCAAAGACTTGAAAGATGCAGGGGTGGTGATTCATGGCCAGTACAGAAGACAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | ATCTTCACAACTGCACACACCTGTGACTTGAGACACTaGAAGGAACTCAATAGCCACCCTCACAGCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IFTTAHTCDLRH*KELNSHPHSCK Trigger: TTTACAGCTGTGAGGGTGGCTATTGAGTTCCTTCCAGTGTCTCAAGTCACAGGTGTGTGCAGTTGTGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGTCCCGGAGAAAGGGGTaGGAGGTACAACTGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKSRRKG*EVQLRA Trigger: AGCTCTCAGTTGTACCTCCAACCCCTTTCTCCGGGA...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | TGCATCTTTCAAGTCTTTGATGGTAGCACTGATTGCTaGAATTCTGCCAGGGATGTGACACTTTTGGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CIFQVFDGSTDC*NSARDVTLLVP Trigger: GGGAACCAAAAGTGTCACATCCCTGGCAGAATTGCAGCAATCAGTGCTACCATCAAAGACTTGAAAGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | CCCTGCATCTTTCAAGTCTTTGATGGTAGCACTGATTaGTGCAATTCTGCCAGGGATGTGACACTTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PCIFQVFDGSTD*CNSARDVTLLV Trigger: AACCAAAAGTGTCACATCCCTGGCAGAATTGCAGCAATCAGTGCTACCATCAAAGACTTGAAAGATGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGCCTAGAGGCCACTGTTAGAAATAGCATCTCCTTACCAACTGCACCTTTCCCTTCACAGACTCCTTaGTTCAACTGTTTCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSLEATVRNSISLPTAPFPSQTP*FNCFFF Trigger: AAAGAAGAAACAGTTGAACAAAGGAGTCTGTGAAGG...GAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAACAGTGGCCTCTAGGCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | TTTCGGCAGCTAAGCACTGGGCCAAGATTTAAGGCTTaGATTCCAATAAATCAGCAGGTCACAAATCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: FRQLSTGPRFKA*IPINQQVTNQT Trigger: GGTCTGATTTGTGACCTGCTGATTTATTGGAATTCAAGCCTTAAATCTTGGCCCAGTGCTTAGCTGCCGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | TTAGAAATAGCATCTCCTTACCAACTGCACCTTTCATaGTGTAAGATGGCACATGGCAGGGTGGTTAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: LEIASPYQLHLS*CKMAHGRVVKL Trigger: GAGTTTAACCACCCTGCCATGTGCCATCTTACAGCATGAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | AGGAGTGACTGCTCCTGTTTACCACAAAAACAAGTGTaGAGCCTACTACTTTATAGGGGAGAACAAGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: RSDCSCLPQKQV*SLLLYRGEQAI Trigger: GATTGCTTGTTCTCCCCTATAAAGTAGTAGGCTCCACACTTGTTTTTGTGGTAAACAGGAGCAGTCACTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGACTTCTGGGTTTGTCTaGGATAGGCAGAATGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKTSGFV*DRQNVR Trigger: CCTCACATTCTGCCTATCCAAGACAAACCCAGAAGT...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | TGTAAAAGTCTACACTATGGTACAGCAGCACCAATATaGCCAAATGTGTTCTCACTACACAGCTGCATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CKSLHYGTAAPI*PNVFSLHSCIN Trigger: ATTGATGCAGCTGTGTAGTGAGAACACATTTGGCCATATTGGTGCTGCTGTACCATAGTGTAGACTTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGACTCTCCTTCACAGACTCCTTTGTTCAACTGTTTCTTCTTTAGATCATCTGCTGCAAGTTTACTGTaGCTTAAGGAAGAAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WDSPSQTPLFNCFFFRSSAASLL*LKEESH Trigger: GTGACTTTCTTCCTTAAGCAACAGTAAACTTGCAGC...AGATGATCTAAAGAAGAAACAGTTGAACAAAGGAGTCTGTGAAGGAGAGTCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTTCTTAAGGTCTCCTGGAATTAGCATCTTAGAACCAGTATCCCAGAATTCCAGTAGGGTGCAAAATTaGACAGCATTTCTGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: YFLRSPGISILEPVSQNSSRVQN*TAFLHS Trigger: GCTGTGCAGAAATGCTGTCAAATTTTGCACCCTACT...GGAATTCTGGGATACTGGTTCTAAGATGCTAATTCCAGGAGACCTTAAGAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | GATCTGGAAATAATTCCTTCTGAGGCGATACACACTTaGAATAGACTTGAACTCAGCCTGGTTAGATTATCC | + |
|
Preference number: 3 (lower is better) Translates to: DLEIIPSEAIHT*NRLELSLVRLS Trigger: GGATAATCTAACCAGGCTGAGTTCAAGTCTATTTCAAGTGTGTATCGCCTCAGAAGGAATTATTTCCAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | AATTTAGGTTTAATGGCTACTGACTCCTTCAAAACTTaGAGTGCAGTTTCTTGTGCAGACAGAACTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NLGLMATDSFKT*SAVSCADRTQG Trigger: TCCTTGAGTTCTGTCTGCACAAGAAACTGCACTGCAAGTTTTGAAGGAGTCAGTAGCCATTAAACCTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCTGCCTGACACCCAAACTGTCTCTTTTGATTATCCATTTTCTTTCAAAGATCCAACAGTATCCTTaGGTATTGAGTTCTCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VSCLTPKLSLLIIHFLSKIQQYP*VLSSQL Trigger: AAGCTGAGAACTCAATACCAAAGGATACTGTTGGAT...CTTTGAAAGAAAATGGATAATCAAAAGAGACAGTTTGGGTGTCAGGCAGCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CCA 72 bp | AGGCGATACACACTTGAAATAGACTTGAACTCAGCCTaGTTAGATTATCCAGAATATAGCTTGAGAAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RRYTLEIDLNSA*LDYPEYSLRRL Trigger: TAACCTTCTCAAGCTATATTCTGGATAATCTAACCAGGCTGAGTTCAAGTCTATTTCAAGTGTGTATCGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR TCA 72 bp | GTGAGTCAGACTTCAACCAAAATTCCACTAATCACCTaGCCTCCTATTTTTAACTCAAAGGACACAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: VSQTSTKIPLIT*PPIFNSKDTIF Trigger: AAATATTGTGTCCTTTGAGTTAAAAATAGGAGGTCAGGTGATTAGTGGAATTTTGGTTGAAGTCTGACTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR GCA 72 bp | AAAGGTTTACTGTTGATCTTTCTAATCAAAAGCAATTaGTTCTGGTGGTCCTTATGGACAGATACCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KGLLLIFLIKSN*FWWSLWTDTKE Trigger: TTCTTTGGTATCTGTCCATAAGGACCACCAGAAGCAATTGCTTTTGATTAGAAAGATCAACAGTAAACCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCCAGGGCGAAGGGTTGGGTaGAGGACCCACAGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AVDGEEAGPTQHDGITGPGRRVG*RTHSST Trigger: GGTGGAGCTGTGGGTCCTGCACCCAACCCTTCGCCC...TGGCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | AAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGACCCACAGCTCCACCTaGTGCAGCTGGGGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KINRSASEPSLHRAAHTETHSST*CSWGLC Trigger: ACAAAGCCCCCAGCTGCAGCAGGTGGAGCTGTGGGT...CTCAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGTTGTCCTGGCTCGCCTaGAAGGCAAACGCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAASHVLNLSSRSCPYGVLSWLA*KANAFS Trigger: GGAAAAGGCGTTTGCCTTCCAGGCGAGCCAGGACAA...CACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | AAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGGTTCGCCAAGTCATGTaGGAACAGGCACTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KINRSASEPSLHRAAHTEVRQVM*EQALAA Trigger: GGCAGCCAGTGCCTGTTCTCACATGACTTGGCGAAC...CTCAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | AAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGCACAGCTCCACCTGCTaGAGCTGGGGGCTTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KINRSASEPSLHRAAHTEHSSTC*SWGLCM Trigger: CATACAAAGCCCCCAGCTGCAGCAGGTGGAGCTGTG...CTCAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | AATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTAGTATTTGCAGATGGTaGACGGCTTGCTGTTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLSSRSCPYGVGRGPTLSSICRW*TACCSP Trigger: TGGCGAACAGCAAGCCGTCCACCATCTGCAAATACT...AGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | AAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGTTGGCACATCTCCATTaGCGGATGCAGGACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KINRSASEPSLHRAAHTELAHLH*RMQDRQ Trigger: CTGCCTGTCCTGCATCCGTCAATGGAGATGTGCCAA...CTCAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | CTACGCCCACATCAACAACCGAGACCAGGTGATCTGCATGGCCGGGCGACACAGCCTTCTGGTAGTATTTaGAGATGGTGGACGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRPHQQPRPGDLHGRATQPSGSI*RWWTAC Trigger: GCAAGCCGTCCACCATCTGCAAATACTACCAGAAGG...CTGTGTCGCCCGGCCATGCAGATCACCTGGTCTCGGTTGTTGATGTGGGCGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGCCAGGATCACCTCCATaGAGATGCTGCACACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAASHVLNLSSRSCPYGVPGSPP*RCCTLC Trigger: ACAAAGTGTGCAGCATCTGCATGGAGGTGATCCTGG...CACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCCATCAGTGCTGGGGACTTaGCGGGTTTCTCGGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AVDGEEAGPTQHDGITGPSVLGT*RVSRFS Trigger: CGAGAACCGAGAAACCCGGCAAGTCCCCAGCACTGA...TGGCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | AATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTTGGAATTACAAACTCTaGTATCACACGGCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSSRSCPYGVGRGPTLSWNYKL*YHTALW Trigger: CCAGAGTGCCGTGTGATATCAGAGTTTGTAATTCCA...AGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCCAATGGGGCTTCATCTCTaGGCTGGTCTGAGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: AVDGEEAGPTQHDGITGPMGLHL*AGLRVT Trigger: AGTGACCCTCAGACCAGCCCAGAGATGAAGCCCCAT...TGGCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGTTTTCAAACTGCTTaGCACATCTCCATTGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAASHVLNLSSRSCPYGVGFQTA*HISIDG Trigger: TCCGTCAATGGAGATGTGCCAAGCAGTTTGAAAACC...CACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGTGCAGACAGAACTCAAGGAGCCCCCTCTGCAGTTCATGAACAACCAAGTCTTCCGAGGTTTCTCTaGCTCTGCCAGCCGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCADRTQGAPSAVHEQPSLPRFL*LCQPPI Trigger: GATGGGCGGCTGGCAGAGCCAGAGAAACCTCGGAAG...ACTTGGTTGTTCATGAACTGCAGAGGGGGCTCCTTGAGTTCTGTCTGCACAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | AGTGACCAGGTGACCACCAGGCAGTGCTCTTTAGCTTaGTTTCCCAAGTGCCCTTATGGTGAGGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDQVTTRQCSLA*FPKCPYGEGAE Trigger: CTCTGCACCCTCACCATAAGGGCACTTGGGAAACAAAGCTAAAGAGCACTGCCTGGTGGTCACCTGGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGCCTAGAGGCCACTGTTAGAAATAGCATCTCCTTACCAACTGCACCTTTCATCTCTGGGCTGGTCTaGGGGTCACTGCAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLEATVRNSISLPTAPFISGLV*GSLQPP Trigger: AGGTGGCTGCAGTGACCCTCAGACCAGCCCAGAGAT...GAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAACAGTGGCCTCTAGGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TCTATTAGAGATGATCACTGCAGAGGAGCCTTCTACAGGGCTGGCGATGTCTTGAGGTTTCTCTGGCTCTaGCAGCCGCCCATCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIRDDHCRGAFYRAGDVLRFLWL*QPPIRV Trigger: TACCCTGATGGGCGGCTGGCAGAGCCAGAGAAACCT...CAAGACATCGCCAGCCCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | TGCACATGGAGTCCTGGCCACCTGGGGGAGCCTGCTTaGGTACTACAGAACTTTGTGGACAAACTGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CTWSPGHLGEPA*VLQNFVDKLCL Trigger: TAGACACAGTTTGTCCACAAAGTTCTGTAGTACCAAAGCAGGCTCCCCCAGGTGGCCAGGACTCCATGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | GCTGCTGCAGGGACATGCAATTGGGAACTTGGCTCCTaGAGCCTATATGGACAGTGGTGCAGTGCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAAGTCNWELGS*SLYGQWCSASF Trigger: AAAACTGGCACTGCACCACTGTCCATATAGGCTCAAGGAGCCAAGTTCCCAATTGCATGTCCCTGCAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | ACTGATTGCTGCAATTCTGCCAGGGATGTGACACTTTaGGTTCCCATCCCTGGCAGAGACCCTGCTAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDCCNSARDVTL*VPIPGRDPAKG Trigger: GCCTTTAGCAGGGTCTCTGCCAGGGATGGGAACCAAAAGTGTCACATCCCTGGCAGAATTGCAGCAATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | TCTATTAGAGATGATCACTGCAGAGGAGCCTTCTACAGGGCTGGCGATGTCTTGATGTCAGGAGAAGGGTaGGGACTATGCAGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIRDDHCRGAFYRAGDVLMSGEG*GLCRPE Trigger: CTCAGGCCTGCATAGTCCTCACCCTTCTCCTGACAT...CAAGACATCGCCAGCCCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAATAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TCTATTAGAGATGATCACTGCAGAGGAGCCTTCTACAGGGCTGGCGATGTCTTGGACGGTAAAGGCACTTaGTTCCAAAGGGGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIRDDHCRGAFYRAGDVLDGKGT*FQRGRS Trigger: GGACCTGCCCCTTTGGAAGCAAGTGCCTTTACCGTC...CAAGACATCGCCAGCCCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAACAAGTGTGGAGCCTACTACTTTATAGGGGAGAACAAGCAATCTGTGAGAGGACTATGCAGGCCTaGGGAGGGCGAAGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKQVWSLLLYRGEQAICERTMQA*GGRRVG Trigger: CCCAACCCTTCGCCCTCCTCAGGCCTGCATAGTCCT...CTCACAGATTGCTTGTTCTCCCCTATAAAGTAGTAGGCTCCACACTTGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | TTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGTCCCCATTCCCTGTTTaGAAGCTTCAATTAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAASHVLNLSSRSCPYGVSPFPV*KLQLIH Trigger: ATGAATTAATTGAAGCTTTCAAACAGGGAATGGGGA...CACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGCTGGATTATTCACTTTaGTTGGAGGAGTCTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAASHVLNLSSRSCPYGVLDYSL*LEESYL Trigger: AAGATAAGACTCCTCCAAGCAAAGTGAATAATCCAG...CACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TCTATTAGAGATGATCACTGCAGAGGAGCCTTCTACAGGGCTGGCGATGTCTTGCATTGCTGTAGGAGCTaGTGGCCTCCAAGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIRDDHCRGAFYRAGDVLHCCRS*WPPSHP Trigger: TGGATGACTTGGAGGCCAGCAGCTCCTACAGCAATG...CAAGACATCGCCAGCCCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGTGCAGACAGAACTCAAGGAGCCCCCTCTGCAGTTCATGAACAACCAAGTCCTTCAGAGCTTAGCTaGTTCCGAGGTTTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCADRTQGAPSAVHEQPSPSELS*FRGFSG Trigger: GCCAGAGAAACCTCGGAAGCAGCTAAGCTCTGAAGG...ACTTGGTTGTTCATGAACTGCAGAGGGGGCTCCTTGAGTTCTGTCTGCACAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCCTAGAGGCCACTGTTAGAAATAGCATCTCCTTACCAACTGCACCTTTCCTGCACACTTTGTCCTaGCTCGCCTGGAAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLEATVRNSISLPTAPFLHTLS*LAWKAN Trigger: GTTTGCCTTCCAGGCGAGCCAGGACAAAGTGTGCAG...GAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAACAGTGGCCTCTAGGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | TCCCTGGAGATCTTCACAACTGCACACACCTGTGACTaGAGACACTGGAAGGAACTCAATAGCCACCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLEIFTTAHTCD*RHWKELNSHPH Trigger: GTGAGGGTGGCTATTGAGTTCCTTCCAGTGTCTCAAGTCACAGGTGTGTGCAGTTGTGAAGATCTCCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | GTGGGCCGCGGCCCAACCCTATCTGTAGCCACATCCTaGTCTGTAAGAAAGCCAGGAATACAGGTTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VGRGPTLSVATS*SVRKPGIQVFL Trigger: TAAGAAAACCTGTATTCCTGGCTTTCTTACAGACAAGGATGTGGCTACAGATAGGGTTGGGCCGCGGCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCTAGAGGCCACTGTTAGAAATAGCATCTCCTTACCAACTGCACCTTTCAGATGGTGGACGGCTTaGTGTTCGCCAAGTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLEATVRNSISLPTAPFRWWTA*CSPSHV Trigger: CACATGACTTGGCGAACAGCAAGCCGTCCACCATCT...GAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAACAGTGGCCTCTAGGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCCATATCACACGGCACTCTaGACAAGACTTTATGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVDGEEAGPTQHDGITGPYHTAL*TRLYDW Trigger: CCAATCATAAAGTCTTGTCCAGAGTGCCGTGTGATA...TGGCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | ATACCAAGTTTCCAACTAATGAGACCACGTGGGGCCTaGTTTCAGATCCTGTCTTCCATCGAGCTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSFQLMRPRGA*FQILSSIELLQ Trigger: CTGAAGCAGCTCGATGGAAGACAGGATCTGAAACAAGGCCCCACGTGGTCTCATTAGTTGGAAACTTGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | ATGATGGAATTACTGGGCCAGAGTAGGGTGCAAAATTaGACAGCATTTCTGCACAGCCATGGGGGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MMELLGQSRVQN*TAFLHSHGGLV Trigger: AACCAGACCCCCATGGCTGTGCAGAAATGCTGTCAAATTTTGCACCCTACTCTGGCCCAGTAATTCCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTACTGACTCCTTCAAAACTTGCAGTGCAGTTTCTTGTGCAGACAGAACTCAGGGGCAGGTCCCCTTaGCTTGTTCAAAGTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLLTPSKLAVQFLVQTELRGRSP*LVQSIC Trigger: GCAAATACTTTGAACAAGGCAAGGGGACCTGCCCCT...GAGTTCTGTCTGCACAAGAAACTGCACTGCAAGTTTTGAAGGAGTCAGTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGTAGCTACACATCGTATATCAGGAAGTATGCTAATTGCTCAAGTAAGGAAGGGGTGGAGGACTTaGAGCCTGCAGATCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RSVATHRISGSMLIAQVRKGWRT*SLQISH Trigger: GTGTGAGATCTGCAGGCTTCAAGTCCTCCACCCCTT...CCTTACTTGAGCAATTAGCATACTTCCTGATATACGATGTGTAGCTACTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAACAAGTGTGGAGCCTACTACTTTATAGGGGAGAACAAGCAATCTGTGAGCTCCAGAAAGGTGCATaGAGAGGTCTCCTAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKQVWSLLLYRGEQAICELQKGA*RGLLAL Trigger: CAGAGCTAGGAGACCTCTTCATGCACCTTTCTGGAG...CTCACAGATTGCTTGTTCTCCCCTATAAAGTAGTAGGCTCCACACTTGTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TCTATTAGAGATGATCACTGCAGAGGAGCCTTCTACAGGGCTGGCGATGTCTTGTTCAAAGTATTTGCATaGCTTCTTCCCCATTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIRDDHCRGAFYRAGDVLFKVFA*LLPHSL Trigger: CAGGGAATGGGGAAGAAGGCATGCAAATACTTTGAA...CAAGACATCGCCAGCCCTGTAGAAGGCTCCTCTGCAGTGATCATCTCTAATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | CATCTTAGAACCAGTATCCCAGAATTCCAGAAATTTCAAAATGGCTACTTTCTGGCTTCATCTCTGGGCTaGTCTGAGGGTCACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLRTSIPEFQKFQNGYFLASSLG*SEGHCS Trigger: GCTGCAGTGACCCTCAGACCAGCCCAGAGATGAAGC...CAGAAAGTAGCCATTTTGAAATTTCTGGAATTCTGGGATACTGGTTCTAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGCCTAGAGGCCACTGTTAGAAATAGCATCTCCTTACCAACTGCACCTTTCCTGGACAAGACTTTATaGTTGGGTTTTCAAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLEATVRNSISLPTAPFLDKTL*LGFQTA Trigger: AGCAGTTTGAAAACCCAATCATAAAGTCTTGTCCAG...GAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAACAGTGGCCTCTAGGCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | CATCTTAGAACCAGTATCCCAGAATTCCAGAAATTTCAAAATGGCTACTTTCTGACAACTGCGGCTCATTaGTGTAGGAGCTGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLRTSIPEFQKFQNGYFLTTAAH*CRSCWP Trigger: AGGCCAGCAGCTCCTACAGCAATGAGCCGCAGTTGT...CAGAAAGTAGCCATTTTGAAATTTCTGGAATTCTGGGATACTGGTTCTAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | AAAGGCTTCCATTTAGCTTTTCCCAGGGGAAACAGTTaGAAGGCCCACTGTAACTATTGTGAGTCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGFHLAFPRGNS*KAHCNYCESDF Trigger: GAAGTCTGACTCACAATAGTTACAGTGGGCCTTCAAACTGTTTCCCCTGGGAAAAGCTAAATGGAAGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAACAAGTGTGGAGCCTACTACTTTATAGGGGAGAACAAGCAATCTGTGAGTGCAGTTGGAGAGAATaGCAAACCTCCTTTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKQVWSLLLYRGEQAICECSWRE*QTSFQK Trigger: CTTCTGAAAGGAGGTTTGGCATTCTCTCCAACTGCA...CTCACAGATTGCTTGTTCTCCCCTATAAAGTAGTAGGCTCCACACTTGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTACTGACTCCTTCAAAACTTGCAGTGCAGTTTCTTGTGCAGACAGAACTCCTTGTTCAAAGTATTTaGATGCCTTCTTCCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: WLLTPSKLAVQFLVQTELLVQSI*MPSSPF Trigger: GAATGGGGAAGAAGGCATGCAAATACTTTGAACAAG...GAGTTCTGTCTGCACAAGAAACTGCACTGCAAGTTTTGAAGGAGTCAGTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR GCA 90 bp | TATTTCTTAAGGTCTCCTGGAATTAGCATCTTAGAACCAGTATCCCAGAATTCCTCTACTCCAGAAAGGTaGATGAAGAGGTCTCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YFLRSPGISILEPVSQNSSTPER*MKRSPS Trigger: GCTAGGAGACCTCTTCATGCACCTTTCTGGAGTAGA...GGAATTCTGGGATACTGGTTCTAAGATGCTAATTCCAGGAGACCTTAAGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CCA 90 bp | CATCTTAGAACCAGTATCCCAGAATTCCAGAAATTTCAAAATGGCTACTTTCTGAGCTTTCCTTTGTTCTaGGTCAAAGGGGTGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLRTSIPEFQKFQNGYFLSFPLF*VKGVED Trigger: GTCCTCCACCCCTTTGACCCAGAACAAAGGAAAGCT...CAGAAAGTAGCCATTTTGAAATTTCTGGAATTCTGGGATACTGGTTCTAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| 3UTR CAA 72 bp | GTTATGACACAAGGCTGGAGAGTTAAAGGTTTACTGTaGATCTTTCTAATCAAAAGCAATTGCTTCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VMTQGWRVKGLL*IFLIKSNCFWW Trigger: CCACCAGAAGCAATTGCTTTTGATTAGAAAGATCAACAGTAAACCTTTAACTCTCCAGCCTTGTGTCATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CAA 90 bp | CTACGCCCACATCAACAACCGAGACCAGGTGATCTGCATGGCCGGGCGACACAGGCCAGACCAGTGAGATaGCGGTCTCTGAGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRPHQQPRPGDLHGRATQARPVR*RSLSTS Trigger: GCTGGTGCTCAGAGACCGCAATCTCACTGGTCTGGC...CTGTGTCGCCCGGCCATGCAGATCACCTGGTCTCGGTTGTTGATGTGGGCGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS TCA 90 bp | CATTGCTGTAGGAGCTGCTGGCCTCCAAGTCATCCAGGCCAGTCCTaGTGGCATCTAGGTAGGAATGGGGCTTCATCTCTGGGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HCCRSCWPPSHPGQS*WHLGRNGASSLGWS Trigger: AGACCAGCCCAGAGATGAAGCCCCATTCCTACCTAGATGCCATCAGGACTGGCCTGGATGACTTGGAGGCCAGCAGCTCCTACAGCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS GCA 90 bp | AGGCGCAGTAGCCCTTCTGGTAGTATTTGCAGATGGTGGACGGCTTaGTGTTCGCCAAGTCATGTGAGAACAGGCACTGGCTGCCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRSSPSGSICRWWTA*CSPSHVRTGTGCLR Trigger: GCGAAGGCAGCCAGTGCCTGTTCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCTACTGCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CAA 90 bp | AAAATCAACAGGAGCGCCTCTGAGCCTTCCCTGCATCGGGCAGCTCACACTGAGCAGATGGTGGACGGCTaGCTGTTCGCCAAGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: KINRSASEPSLHRAAHTEQMVDG*LFAKSC Trigger: ACATGACTTGGCGAACAGCAAGCCGTCCACCATCTG...CTCAGTGTGAGCTGCCCGATGCAGGGAAGGCTCAGAGGCGCTCCTGTTGATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS GCA 90 bp | CCACAGCTCCACCTGCTGCAGCTGGGGGCTTTGTATGATCATATCTaGAGCGTGCACCATAGGCGCAGTAGCCCTTCTGGTAGTATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQLHLLQLGALYDHI*SVHHRRSSPSGSIC Trigger: GCAAATACTACCAGAAGGGCTACTGCGCCTATGGTGCACGCTGCAGATATGATCATACAAAGCCCCCAGCTGCAGCAGGTGGAGCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS CCA 90 bp | GTGCACCATAGGCGCAGTAGCCCTTCTGGTAGTATTTGCAGATGGTaGACGGCTTGCTGTTCGCCAAGTCATGTGAGAACAGGCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHHRRSSPSGSICRW*TACCSPSHVRTGTG Trigger: GCCAGTGCCTGTTCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCTACTGCGCCTATGGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGGATGGTGAGGAAGCTGGCCCCACACAACATGATGGAATTACTGGGCCTTGGCACATCTCCATaGACGGATGCAGGACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLWMVRKLAPHNMMELLGLGTSP*TDAGQA Trigger: TGCCTGTCCTGCATCCGTCAATGGAGATGTGCCAAG...GCCCAGTAATTCCATCATGTTGTGTGGGGCCAGCTTCCTCACCATCCACAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS TCA 90 bp | TTCGAATGTGTCCTCATAACAGATGTGGCAATGTCAGGAGAAGGGTaGGGACTATGCAGGCCTGAGGAGGGCGAAGGGTTGGGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FECVLITDVAMSGEG*GLCRPEEGEGLGAG Trigger: TCCTGCACCCAACCCTTCGCCCTCCTCAGGCCTGCATAGTCCTCACCCTTCTCCTGACATTGCCACATCTGTTATGAGGACACATTCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS CCA 90 bp | AGCGTGCACCATAGGCGCAGTAGCCCTTCTGGTAGTATTTGCAGATaGTGGACGGCTTGCTGTTCGCCAAGTCATGTGAGAACAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SVHHRRSSPSGSICR*WTACCSPSHVRTGT Trigger: AGTGCCTGTTCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCTACTGCGCCTATGGTGCACGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS GCA 90 bp | ATCTGCAGCGTGCACCATAGGCGCAGTAGCCCTTCTGGTAGTATTTaGAGATGGTGGACGGCTTGCTGTTCGCCAAGTCATGTGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: ICSVHHRRSSPSGSI*RWWTACCSPSHVRT Trigger: TGTTCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCTACTGCGCCTATGGTGCACGCTGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS GCA 90 bp | CAAACCTCCTTTCAGAAGCAGATGCTTTCTCCAGGATCACCTCCATaGAGATGCTGCACACTTTGTCCTGGCTCGCCTGGAAGGCAAACG | + |
|
Preference number: 5 (lower is better) Translates to: QTSFQKQMLSPGSPP*RCCTLCPGSPGRQT Trigger: CGTTTGCCTTCCAGGCGAGCCAGGACAAAGTGTGCAGCATCTGCATGGAGGTGATCCTGGAGAAAGCATCTGCTTCTGAAAGGAGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS GCA 90 bp | AGGTCTCCTAGCTCTGTCACATCCACATCGTCAGTGCTGGGGACTTaGCGGGTTTCTCGGTTCTCGATAAAATCCCAAAGCCGAACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPSSVTSTSSVLGT*RVSRFSIKSQSRTE Trigger: CTCAGTTCGGCTTTGGGATTTTATCGAGAACCGAGAAACCCGGCAAGTCCCCAGCACTGACGATGTGGATGTGACAGAGCTAGGAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS CCA 90 bp | ATGGGGCTTCATCTCTGGGCTGGTCTGAGGGTCACTGCAGCCACCTaGATTATTCACTTTGCTTGGAGGAGTCTTATCTTCAGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: MGLHLWAGLRVTAAT*IIHFAWRSLIFSQT Trigger: GGTCTGGCTGAAGATAAGACTCCTCCAAGCAAAGTGAATAATCCAGGTGGCTGCAGTGACCCTCAGACCAGCCCAGAGATGAAGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
||
| CDS-3UTR CAA 90 bp | TTGGCAGCCTCCCACGTGCTGAATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGCCTTGTTCAAAGTATTaGCATGCCTTCTTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LAASHVLNLSSRSCPYGVPCSKY*HAFFPI Trigger: AATGGGGAAGAAGGCATGCAAATACTTTGAACAAGG...CACCCCATAGGGGCAGCTCCTGGAAGACAGATTCAGCACGTGGGAGGCTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS TCA 90 bp | GTAGTATTTGCAGATGGTGGACGGCTTGCTGTTCGCCAAGTCATGTaGGAACAGGCACTGGCTGCCTTCGCGACATACGCCATGCATAAA | + |
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Preference number: 5 (lower is better) Translates to: VVFADGGRLAVRQVM*EQALAAFATYAMHK Trigger: TTTATGCATGGCGTATGTCGCGAAGGCAGCCAGTGCCTGTTCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 90 bp | GCTGGTCTGAGGGTCACTGCAGCCACCTGGATTATTCACTTTGCTTaGAGGAGTCTTATCTTCAGCCAGACCAGTGAGATTGCGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: AGLRVTAATWIIHFA*RSLIFSQTSEIAVS Trigger: AGAGACCGCAATCTCACTGGTCTGGCTGAAGATAAGACTCCTCCAAGCAAAGTGAATAATCCAGGTGGCTGCAGTGACCCTCAGACCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS-3UTR CAA 90 bp | GTCAGCCTAGAGGCCACTGTTAGAAATAGCATCTCCTTACCAACTGCACCTTTCCAGATGCTGCACACTTaGTCCTGGCTCGCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VSLEATVRNSISLPTAPFQMLHT*SWLAWK Trigger: CTTCCAGGCGAGCCAGGACAAAGTGTGCAGCATCTG...GAAAGGTGCAGTTGGTAAGGAGATGCTATTTCTAACAGTGGCCTCTAGGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS-3UTR CAA 90 bp | AATCTGTCTTCCAGGAGCTGCCCCTATGGGGTGGGCCGCGGCCCAACCCTATCTCTACCCAATACACACTaGGAATTACAAACTCTGATA | + |
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Preference number: 5 (lower is better) Translates to: NLSSRSCPYGVGRGPTLSLPNTH*ELQTLI Trigger: TATCAGAGTTTGTAATTCCAAGTGTGTATTGGGTAG...AGATAGGGTTGGGCCGCGGCCCACCCCATAGGGGCAGCTCCTGGAAGACAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 90 bp | CTAGGTAGGAATGGGGCTTCATCTCTGGGCTGGTCTGAGGGTCACTaGAGCCACCTGGATTATTCACTTTGCTTGGAGGAGTCTTATCTT | + |
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Preference number: 5 (lower is better) Translates to: LGRNGASSLGWSEGH*SHLDYSLCLEESYL Trigger: AAGATAAGACTCCTCCAAGCAAAGTGAATAATCCAGGTGGCTGCAGTGACCCTCAGACCAGCCCAGAGATGAAGCCCCATTCCTACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS-3UTR CAA 90 bp | AGGTCAGTAGCTACACATCGTATATCAGGAAGTATGCTAATTGCTCAAGTAAGGGTCAGTGCTGGGGACTaGCCGGGTTTCTCGGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RSVATHRISGSMLIAQVRVSAGD*PGFSVL Trigger: GAGAACCGAGAAACCCGGCAAGTCCCCAGCACTGAC...CCTTACTTGAGCAATTAGCATACTTCCTGATATACGATGTGTAGCTACTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 90 bp | TTCAAATGTCGACATACACATCTTCTCGTGAGCTTTCCTTTGTTCTaGGTCAAAGGGGTGGAGGACTTGAAGCCTGCAGATCTCACACAT | + |
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Preference number: 5 (lower is better) Translates to: FKCRHTHLLVSFPLF*VKGVEDLKPADLTH Trigger: ATGTGTGAGATCTGCAGGCTTCAAGTCCTCCACCCCTTTGACCCAGAACAAAGGAAAGCTCACGAGAAGATGTGTATGTCGACATTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS-3UTR CAA 90 bp | AGGTCAGTAGCTACACATCGTATATCAGGAAGTATGCTAATTGCTCAAGTAAGGCTGCAGCTGGGGGCTTaGTATGATCATATCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RSVATHRISGSMLIAQVRLQLGA*YDHICS Trigger: GCTGCAGATATGATCATACAAAGCCCCCAGCTGCAG...CCTTACTTGAGCAATTAGCATACTTCCTGATATACGATGTGTAGCTACTGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS-3UTR CAA 90 bp | TATTTCTTAAGGTCTCCTGGAATTAGCATCTTAGAACCAGTATCCCAGAATTCCGCAGGTCCCCTTGCCTaGTTCAAAGTATTTGCATGC | + |
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Preference number: 5 (lower is better) Translates to: YFLRSPGISILEPVSQNSAGPLA*FKVFAC Trigger: GCATGCAAATACTTTGAACAAGGCAAGGGGACCTGC...GGAATTCTGGGATACTGGTTCTAAGATGCTAATTCCAGGAGACCTTAAGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS-3UTR CAA 90 bp | CATCTTAGAACCAGTATCCCAGAATTCCAGAAATTTCAAAATGGCTACTTTCTGAAGGGGCAGGTCCCCTaGCCTTGTTCAAAGTATTTG | + |
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Preference number: 5 (lower is better) Translates to: HLRTSIPEFQKFQNGYFLKGQVP*PCSKYL Trigger: CAAATACTTTGAACAAGGCAAGGGGACCTGCCCCTT...CAGAAAGTAGCCATTTTGAAATTTCTGGAATTCTGGGATACTGGTTCTAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 72 bp | GGTGAGGACTATGCAGGCCTGAGGAGGGCGAAGGGTTaGGTGCAGGACCCACAGCTCCACCTGCTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GEDYAGLRRAKG*VQDPQLHLLQL Trigger: CAGCTGCAGCAGGTGGAGCTGTGGGTCCTGCACCCAACCCTTCGCCCTCCTCAGGCCTGCATAGTCCTCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | CCCCAGCGGCAGCATAGGGGCACAACTGCGGCTCATTaGTGTAGGAGCTGCTGGCCTCCAAGTCATCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PQRQHRGTTAAH*CRSCWPPSHPG Trigger: GCCTGGATGACTTGGAGGCCAGCAGCTCCTACAGCAATGAGCCGCAGTTGTGCCCCTATGCTGCCGCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | CGAAGGGTTGGGTGCAGGACCCACAGCTCCACCTGCTaGAGCTGGGGGCTTTGTATGATCATATCTGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RRVGCRTHSSTC*SWGLCMIISAA Trigger: CGCTGCAGATATGATCATACAAAGCCCCCAGCTGCAGCAGGTGGAGCTGTGGGTCCTGCACCCAACCCTTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | GGGCGAAGGGTTGGGTGCAGGACCCACAGCTCCACCTaGTGCAGCTGGGGGCTTTGTATGATCATATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GRRVGCRTHSST*CSWGLCMIISA Trigger: TGCAGATATGATCATACAAAGCCCCCAGCTGCAGCAGGTGGAGCTGTGGGTCCTGCACCCAACCCTTCGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS TCA 72 bp | AGGAGCTGCTGGCCTCCAAGTCATCCAGGCCAGTCCTaGTGGCATCTAGGTAGGAATGGGGCTTCATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RSCWPPSHPGQS*WHLGRNGASSL Trigger: CAGAGATGAAGCCCCATTCCTACCTAGATGCCATCAGGACTGGCCTGGATGACTTGGAGGCCAGCAGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | CACCTGCTGCAGCTGGGGGCTTTGTATGATCATATCTaGAGCGTGCACCATAGGCGCAGTAGCCCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HLLQLGALYDHI*SVHHRRSSPSG Trigger: ACCAGAAGGGCTACTGCGCCTATGGTGCACGCTGCAGATATGATCATACAAAGCCCCCAGCTGCAGCAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS TCA 72 bp | GTCCTCATAACAGATGTGGCAATGTCAGGAGAAGGGTaGGGACTATGCAGGCCTGAGGAGGGCGAAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VLITDVAMSGEG*GLCRPEEGEGL Trigger: CAACCCTTCGCCCTCCTCAGGCCTGCATAGTCCTCACCCTTCTCCTGACATTGCCACATCTGTTATGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS TCA 72 bp | GCTTTCCTTTGTTCTGGGTCAAAGGGGTGGAGGACTTaGAGCCTGCAGATCTCACACATGTCCCCATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AFLCSGSKGWRT*SLQISHMSPCR Trigger: CCTGCATGGGGACATGTGTGAGATCTGCAGGCTTCAAGTCCTCCACCCCTTTGACCCAGAACAAAGGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | AGCCCTTCTGGTAGTATTTGCAGATGGTGGACGGCTTaGTGTTCGCCAAGTCATGTGAGAACAGGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: SPSGSICRWWTA*CSPSHVRTGTG Trigger: GCCAGTGCCTGTTCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | GTGCACCATAGGCGCAGTAGCCCTTCTGGTAGTATTTaGAGATGGTGGACGGCTTGCTGTTCGCCAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: VHHRRSSPSGSI*RWWTACCSPSH Trigger: ATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCTACTGCGCCTATGGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | AATGGGGCTTCATCTCTGGGCTGGTCTGAGGGTCACTaGAGCCACCTGGATTATTCACTTTGCTTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: NGASSLGWSEGH*SHLDYSLCLEE Trigger: CTCCTCCAAGCAAAGTGAATAATCCAGGTGGCTGCAGTGACCCTCAGACCAGCCCAGAGATGAAGCCCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 72 bp | TGGCATCTAGGTAGGAATGGGGCTTCATCTCTGGGCTaGTCTGAGGGTCACTGCAGCCACCTGGATTATTCA | + |
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Preference number: 6 (lower is better) Translates to: WHLGRNGASSLG*SEGHCSHLDYS Trigger: TGAATAATCCAGGTGGCTGCAGTGACCCTCAGACCAGCCCAGAGATGAAGCCCCATTCCTACCTAGATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CAA 72 bp | CTTGGAGGAGTCTTATCTTCAGCCAGACCAGTGAGATaGCGGTCTCTGAGCACCAGCGTCTTCTTCTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: LGGVLSSARPVR*RSLSTSVFFSR Trigger: ACGGGAGAAGAAGACGCTGGTGCTCAGAGACCGCAATCTCACTGGTCTGGCTGAAGATAAGACTCCTCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | TTTGTTCTGGGTCAAAGGGGTGGAGGACTTGAAGCCTaGAGATCTCACACATGTCCCCATGCAGGTAGACAC | + |
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Preference number: 6 (lower is better) Translates to: FVLGQRGGGLEA*RSHTCPHAGRH Trigger: GTGTCTACCTGCATGGGGACATGTGTGAGATCTGCAGGCTTCAAGTCCTCCACCCCTTTGACCCAGAACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS GCA 72 bp | AGCTCTGTCACATCCACATCGTCAGTGCTGGGGACTTaGCGGGTTTCTCGGTTCTCGATAAAATCCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSVTSTSSVLGT*RVSRFSIKSQS Trigger: GCTTTGGGATTTTATCGAGAACCGAGAAACCCGGCAAGTCCCCAGCACTGACGATGTGGATGTGACAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 72 bp | GGCTTGCTGTTCGCCAAGTCATGTGAGAACAGGCACTaGCTGCCTTCGCGACATACGCCATGCATAAAATAC | + |
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Preference number: 6 (lower is better) Translates to: GLLFAKSCENRH*LPSRHTPCIKY Trigger: GTATTTTATGCATGGCGTATGTCGCGAAGGCAGCCAGTGCCTGTTCTCACATGACTTGGCGAACAGCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 72 bp | AGGCGCAGTAGCCCTTCTGGTAGTATTTGCAGATGGTaGACGGCTTGCTGTTCGCCAAGTCATGTGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: RRSSPSGSICRW*TACCSPSHVRT Trigger: TGTTCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCTACTGCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 72 bp | CATAGGCGCAGTAGCCCTTCTGGTAGTATTTGCAGATaGTGGACGGCTTGCTGTTCGCCAAGTCATGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: HRRSSPSGSICR*WTACCSPSHVR Trigger: TCTCACATGACTTGGCGAACAGCAAGCCGTCCACCATCTGCAAATACTACCAGAAGGGCTACTGCGCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CAA 72 bp | AGCTTTCCTTTGTTCTGGGTCAAAGGGGTGGAGGACTaGAAGCCTGCAGATCTCACACATGTCCCCATGCAG | + |
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Preference number: 6 (lower is better) Translates to: SFPLFWVKGVED*KPADLTHVPMQ Trigger: CTGCATGGGGACATGTGTGAGATCTGCAGGCTTCAAGTCCTCCACCCCTTTGACCCAGAACAAAGGAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CAA 90 bp | TTCACTTTGCTTGGAGGAGTCTTATCTTCAGCCAGACCAGTGAGATaGCGGTCTCTGAGCACCAGCGTCTTCTTCTCCCGTTTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: FTLLGGVLSSARPVR*RSLSTSVFFSRFPG Trigger: ACCTGGAAAACGGGAGAAGAAGACGCTGGTGCTCAGAGACCGCAATCTCACTGGTCTGGCTGAAGATAAGACTCCTCCAAGCAAAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 72 bp | CATCTCTGGGCTGGTCTGAGGGTCACTGCAGCCACCTaGATTATTCACTTTGCTTGGAGGAGTCTTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: HLWAGLRVTAAT*IIHFAWRSLIF Trigger: GAAGATAAGACTCCTCCAAGCAAAGTGAATAATCCAGGTGGCTGCAGTGACCCTCAGACCAGCCCAGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 72 bp | CGACATACACATCTTCTCGTGAGCTTTCCTTTGTTCTaGGTCAAAGGGGTGGAGGACTTGAAGCCTGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RHTHLLVSFPLF*VKGVEDLKPAD Trigger: ATCTGCAGGCTTCAAGTCCTCCACCCCTTTGACCCAGAACAAAGGAAAGCTCACGAGAAGATGTGTATGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CCA 72 bp | AGGGTCACTGCAGCCACCTGGATTATTCACTTTGCTTaGAGGAGTCTTATCTTCAGCCAGACCAGTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: RVTAATWIIHFA*RSLIFSQTSEI Trigger: AATCTCACTGGTCTGGCTGAAGATAAGACTCCTCCAAGCAAAGTGAATAATCCAGGTGGCTGCAGTGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CAA 90 bp | CTCATGTTCAAATGTCGACATACACATCTTCTCGTGAGCTTTCCTTaGTTCTGGGTCAAAGGGGTGGAGGACTTGAAGCCTGCAGATCTC | + |
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Preference number: 6 (lower is better) Translates to: LMFKCRHTHLLVSFP*FWVKGVEDLKPADL Trigger: GAGATCTGCAGGCTTCAAGTCCTCCACCCCTTTGACCCAGAACAAAGGAAAGCTCACGAGAAGATGTGTATGTCGACATTTGAACATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS CAA 72 bp | AAATGTCGACATACACATCTTCTCGTGAGCTTTCCTTaGTTCTGGGTCAAAGGGGTGGAGGACTTGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: KCRHTHLLVSFP*FWVKGVEDLKP Trigger: AGGCTTCAAGTCCTCCACCCCTTTGACCCAGAACAAAGGAAAGCTCACGAGAAGATGTGTATGTCGACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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| CDS TCA 72 bp | ATCTCATGTTCAAATGTCGACATACACATCTTCTCGTaGGCTTTCCTTTGTTCTGGGTCAAAGGGGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ISCSNVDIHIFS*AFLCSGSKGWR Trigger: CCTCCACCCCTTTGACCCAGAACAAAGGAAAGCTCACGAGAAGATGTGTATGTCGACATTTGAACATGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000449.9 |
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