Pregenerated sensors for MKNK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020190Ensembl transcript IDs: ENSMUST00000003433.11, ENSMUST00000197276.2, ENSMUST00000198819.2, ENSMUST00000200082.5
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTGGAGTGGAGGTGGGGGCGCAGGTGGCAGGACCTTCACAGTTaGCAGGTGAGCATCGTGGGGTGCAGGCTGGGCGGCCTGAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: WLEWRWGRRWQDLHS*QVSIVGCRLGGLSP Trigger: AGGGCTCAGGCCGCCCAGCCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCCCCACCTCCACTCCAGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR CCA 90 bp | CCACTGTGCTCACCAGGAGGGCCTGTCCCTGACAACACTGAGGGCTaGGAGAGGTGTGGGGTGCTGACCCTGCGGGATCCCCAACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PLCSPGGPVPDNTEG*ERCGVLTLRDPQPW Trigger: CCAGGGTTGGGGATCCCGCAGGGTCAGCACCCCACACCTCTCCCAGCCCTCAGTGTTGTCAGGGACAGGCCCTCCTGGTGAGCACAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR CCA 90 bp | ACCCTGCGGGATCCCCAACCCTGGAAGACAGCAGAGTGGCTGGAGTaGAGGTGGGGGCGCAGGTGGCAGGACCTTCACAGTTGGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: TLRDPQPWKTAEWLE*RWGRRWQDLHSWQV Trigger: CACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCCCCACCTCCACTCCAGCCACTCTGCTGTCTTCCAGGGTTGGGGATCCCGCAGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR CCA 90 bp | CGGGATCCCCAACCCTGGAAGACAGCAGAGTGGCTGGAGTGGAGGTaGGGGCGCAGGTGGCAGGACCTTCACAGTTGGCAGGTGAGCATC | + |
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Preference number: 1 (lower is better) Translates to: RDPQPWKTAEWLEWR*GRRWQDLHSWQVSI Trigger: GATGCTCACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCCCCACCTCCACTCCAGCCACTCTGCTGTCTTCCAGGGTTGGGGATCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR GCA 90 bp | CCCCAGACCCAAGGGTGCTCTGGTGAGGAGATGCAACCACCACTGTaGTCACCAGGAGGGCCTGTCCCTGACAACACTGAGGGCTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: PQTQGCSGEEMQPPL*SPGGPVPDNTEGWE Trigger: CTCCCAGCCCTCAGTGTTGTCAGGGACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTTGGGTCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR GCA 90 bp | GGAGCCCTGCCCTACCCCAGACCCAAGGGTGCTCTGGTGAGGAGATaGAACCACCACTGTGCTCACCAGGAGGGCCTGTCCCTGACAACA | + |
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Preference number: 1 (lower is better) Translates to: GALPYPRPKGALVRR*NHHCAHQEGLSLTT Trigger: TGTTGTCAGGGACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTTGGGTCTGGGGTAGGGCAGGGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR TCA 90 bp | AAGCAGGCACGCCTGAGCTGCTGCCCTCTGGGGGCAACAGGAAGGTaGGAGCCCTGGGTATGGCCTCAGCTCTGGCTAACAGAAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: KQARLSCCPLGATGR*EPWVWPQLWLTEAA Trigger: AGCTGCTTCTGTTAGCCAGAGCTGAGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCCCAGAGGGCAGCAGCTCAGGCGTGCCTGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR CCA 90 bp | TGGGTGGGGAGACATGTGGGAGCCCCATGTTTGCTGATGAAAGCCTaGTCCAGCACCTCTCCTGCTGTGGTGGAGCTAGCTGGGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: WVGRHVGAPCLLMKA*SSTSPAVVELAGCR Trigger: CCTGCACCCAGCTAGCTCCACCACAGCAGGAGAGGTGCTGGACCAGGCTTTCATCAGCAAACATGGGGCTCCCACATGTCTCCCCACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR TCA 90 bp | AGGTCTGTCCCAGGGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTaGTTGTCAACCCTCCAAGGGACACTGCAGGTGGATGATGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: RSVPGQGAKQPGRGF*LSTLQGTLQVDDGD Trigger: GTCCCCATCATCCACCTGCAGTGTCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCCCTGGGACAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR GCA 90 bp | AAGTGCTTGCATGTCCCCCACTCTACAACAGGCCTTTTAGATTTCTaGATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATTCAC | + |
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Preference number: 1 (lower is better) Translates to: KCLHVPHSTTGLLDF*MVCGEASPGSCLIH Trigger: GTGAATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTTGTAGAGTGGGGGACATGCAAGCACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR CCA 90 bp | AAATCCTTACAAAACAGAATACAAAATCCTGGCGTTGACAGTTGGTaGGAAAGGAGTCCGGAGGTCAGTTCACCTGGTACGATGGAGTTA | + |
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Preference number: 1 (lower is better) Translates to: KSLQNRIQNPGVDSW*ERSPEVSSPGTMEL Trigger: TAACTCCATCGTACCAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTTGTATTCTGTTTTGTAAGGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR CAA 90 bp | GTGGCTGGAGTGGAGGTGGGGGCGCAGGTGGCAGGACCTTCACAGTaGGCAGGTGAGCATCGTGGGGTGCAGGCTGGGCGGCCTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: VAGVEVGAQVAGPSQ*AGEHRGVQAGRPEP Trigger: GGGCTCAGGCCGCCCAGCCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCCCCACCTCCACTCCAGCCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR TCA 90 bp | GTGCAGGCTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTTGCTTTCAATCCCAGAGGACCCAGCTaGGCTGGCACCTGGAATGGC | + |
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Preference number: 2 (lower is better) Translates to: VQAGRPEPSALLRALAFNPRGPS*AGTWNG Trigger: GCCATTCCAGGTGCCAGCTCAGCTGGGTCCTCTGGG...ATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAGCCTGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCTGGGGGCAACAGGAAGGTGAGAGCCCTGGGTATGGCCTCAGCTCTGGCTGGCTGGAGTGGAGGTaGGGGCGCAGGTGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: ALWGQQEGESPGYGLSSGWLEWR*GRRWQD Trigger: GTCCTGCCACCTGCGCCCCCACCTCCACTCCAGCCA...GCCAGAGCTGAGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCCCAGAGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | GCCCTCTGGGGGCAACAGGAAGGTGAGAGCCCTGGGTATGGCCTCAGCTCTGGCGTCCCCTTCCAGCTCTaGCCCTGGGAAGTGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: ALWGQQEGESPGYGLSSGVPFQL*PWEVGL Trigger: CAACCCCACTTCCCAGGGGCAGAGCTGGAAGGGGAC...GCCAGAGCTGAGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCCCAGAGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCGGTCAGGCTGAGCCCTaGGAAGGGGCACTCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LAAAPDQQGHGENGNSYCGQAEP*EGALRC Trigger: GCACCTGAGTGCCCCTTCTCAGGGCTCAGCCTGACC...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGAGAGGTGTGGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACAAGCTGGCACCTGGAATaGCAAGGGGTGGGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GWERCGVLTLRDPQPWKTSWHLE*QGVGCP Trigger: TGGACACCCCACCCCTTGCCATTCCAGGTGCCAGCT...TGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCCACACCTCTCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCTGGGGGCAACAGGAAGGTGAGAGCCCTGGGTATGGCCTCAGCTCTGGCCGGGATCCCCAACCCTaGAAGACAGCAGAGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: ALWGQQEGESPGYGLSSGRDPQP*KTAEWL Trigger: CAGCCACTCTGCTGTCTTCCAGGGTTGGGGATCCCG...GCCAGAGCTGAGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCCCAGAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGCCCAGAGGACCCAGCTaGGCTGGCACCTGGAATGGC | + |
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Preference number: 2 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGPRGPS*AGTWNG Trigger: GCCATTCCAGGTGCCAGCTCAGCTGGGTCCTCTGGG...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCGGGGCAACAGGAAGGTaGGAGCCCTGGGTATGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LAAAPDQQGHGENGNSYCGATGR*EPWVWP Trigger: AGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCC...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | GCCCTCTGGGGGCAACAGGAAGGTGAGAGCCCTGGGTATGGCCTCAGCTCTGGCATGCAACCACCACTGTaGTCACCAGGAGGGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: ALWGQQEGESPGYGLSSGMQPPL*SPGGPV Trigger: GACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCAT...GCCAGAGCTGAGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCCCAGAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACAGCAGAGTGGCTGGAGCAGGACCTTCACAGTTaGCAGGTGAGCATCGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GVLTLRDPQPWKTAEWLEQDLHS*QVSIVG Trigger: CCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTG...CTCCAGCCACTCTGCTGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGAGAGGTGTGGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACACAGGACCTTCACAGTTaGCAGGTGAGCATCGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GWERCGVLTLRDPQPWKTQDLHS*QVSIVG Trigger: CCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTG...TGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCCACACCTCTCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACGAGGGTGGAGGATGCTaGGCAGTGGGTGTCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNEGGGC*AVGVPG Trigger: GCCTGGGACACCCACTGCCCAGCATCCTCCACCCTC...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGGGGGCAACAGGAAGGTaGGAGCCCTGGGTATGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGGATGR*EPWVWP Trigger: AGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCC...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR TCA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCCAGCCTCCCTTTCCTaGAAGCAGGCACGCCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNPASLS*KQARLS Trigger: GCTCAGGCGTGCCTGCTTTCAGGAAAGGGAGGCTGG...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGAGACACCTGAGCAGTTaGAGGGCAGGGTGGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGRHLSS*RAGWPG Trigger: GCCAGGCCACCCTGCCCTGCAACTGCTCAGGTGTCT...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCCCCTCCAAGGGACACTaGAGGTGGATGATGGGGACT | + |
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Preference number: 2 (lower is better) Translates to: LAAAPDQQGHGENGNSYCPSKGH*RWMMGT Trigger: AGTCCCCATCATCCACCTGCAGTGTCCCTTGGAGGG...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCACTGTCCCCATCCACCTGCTCCCCAGAGGTCTCTATCCAAGACAGGGAGCTGGAATGGCAAGGGGTaGGGTGTCCAGGTCCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: VHCPHPPAPQRSLSKTGSWNGKG*GVQVPS Trigger: GCTAGGGACCTGGACACCCCACCCCTTGCCATTCCA...GCTCCCTGTCTTGGATAGAGACCTCTGGGGAGCAGGTGGATGGGGACAGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGAGGACCCAGCTGAGCTaGCACCTGGAATGGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGRTQLS*HLEWQG Trigger: CCCTTGCCATTCCAGGTGCCAGCTCAGCTGGGTCCT...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | AAAATCCTGGCGTTGACAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTGAGTTGCAGGGCAGGGTaGCCTGGCCCCTGGCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: KILALTVGGKGVRRSVHLSCRAG*PGPWQP Trigger: CGGCTGCCAGGGGCCAGGCCACCCTGCCCTGCAACT...CAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACATGCAACCACCACTGTaGTCACCAGGAGGGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNMQPPL*SPGGPV Trigger: GACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCAT...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGTCCCTGACAACACTAGCTGGCACCTGGAATaGCAAGGGGTGGGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: EEMQPPLCSPGGPVPDNTSWHLE*QGVGCP Trigger: TGGACACCCCACCCCTTGCCATTCCAGGTGCCAGCT...AGTGTTGTCAGGGACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGAAGACAGCAGAGTGGCTaGAGTGGAGGTGGGGGCGCA | + |
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Preference number: 2 (lower is better) Translates to: GKELSSLGGVSDCQPSKGRQQSG*SGGGGA Trigger: TGCGCCCCCACCTCCACTCCAGCCACTCTGCTGTCT...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGATTCACAGTTGGCAGGTaGGCATCGTGGGGTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GKELSSLGGVSDCQPSKGFTVGR*ASWGAG Trigger: GCCTGCACCCCACGATGCTCACCTGCCAACTGTGAA...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGGCTCTGGTGAGGAGATaGAACCACCACTGTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGALVRR*NHHCAH Trigger: GTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGC...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | AAAATCCTGGCGTTGACAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTGCAGGCACGCCTGAGCTaGTGCCCTCTGGGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: KILALTVGGKGVRRSVHLQARLS*CPLGAT Trigger: TGTTGCCCCCAGAGGGCAGCAGCTCAGGCGTGCCTG...CAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGACTGTCCCCATCCACCTaGTCCCCAGAGGTCTCTATC | + |
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Preference number: 2 (lower is better) Translates to: GKELSSLGGVSDCQPSKGLSPST*SPEVSI Trigger: GATAGAGACCTCTGGGGAGCAGGTGGATGGGGACAG...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGATCGGGGTCAATCAAGTaGACTGTCCCCATCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: GKELSSLGGVSDCQPSKGSGSIK*TVPIHL Trigger: CAGGTGGATGGGGACAGTGCACTTGATTGACCCCGA...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGCAGGCACGCCTGAGCTaGTGCCCTCTGGGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMQARLS*CPLGAT Trigger: TGTTGCCCCCAGAGGGCAGCAGCTCAGGCGTGCCTG...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | TCACCTGGTACGATGGAGTTAAAAGTGCTTGCATGTCCCCCACTCTACAACAGGGAAGGGGCACTCAGGTaGCCTGGGTGGGGAGACATG | + |
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Preference number: 2 (lower is better) Translates to: SPGTMELKVLACPPLYNREGALR*PGWGDM Trigger: CATGTCTCCCCACCCAGGGCACCTGAGTGCCCCTTC...CCTGTTGTAGAGTGGGGGACATGCAAGCACTTTTAACTCCATCGTACCAGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGAGACACCTGAGCAGTTaGAGGGCAGGGTGGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMRHLSS*RAGWPG Trigger: GCCAGGCCACCCTGCCCTGCAACTGCTCAGGTGTCT...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR GCA 90 bp | AAAATCCTGGCGTTGACAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTGGTGAGTGGGGGTCAATaGTGCTCACTGCCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: KILALTVGGKGVRRSVHLVSGGQ*CSLPSQ Trigger: CTGACTGGGCAGTGAGCAGCATTGACCCCCACTCAC...CAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATCTCAGGTGCCCTGGGTaGGGAGACATGTGGGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHLRCPG*GDMWEP Trigger: GGGCTCCCACATGTCTCCCCACCCAGGGCACCTGAG...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTGGAATGGCAAGGGGTaGGGTGTCCAGGTCCCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMWNGKG*GVQVPS Trigger: GCTAGGGACCTGGACACCCCACCCCTTGCCATTCCA...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGCGGGATCCCCAACCCTaGAAGACAGCAGAGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMRDPQP*KTAEWL Trigger: CAGCCACTCTGCTGTCTTCCAGGGTTGGGGATCCCG...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTGTGGTGGAGCTAGCTaGGTGCAGGGTCCCCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMCGGAS*VQGPLP Trigger: TGGAAGGGGACCCTGCACCCAGCTAGCTCCACCACA...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATGGCACTCAGGTGCCCTaGGTGGGGAGACATGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHGTQVP*VGRHVG Trigger: TCCCACATGTCTCCCCACCCAGGGCACCTGAGTGCC...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CCA 90 bp | TCACCTGGTACGATGGAGTTAAAAGTGCTTGCATGTCCCCCACTCTACAACAGGCAGGTGGGGCAGGACTaGAGAAGGCATGTCACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SPGTMELKVLACPPLYNRQVGQD*RRHVTS Trigger: GGAGGTGACATGCCTTCTCCAGTCCTGCCCCACCTG...CCTGTTGTAGAGTGGGGGACATGCAAGCACTTTTAACTCCATCGTACCAGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATTGGAAGACAGCAGAGTaGCTGGAGTGGAGGTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHWKTAE*LEWRWG Trigger: CCCCCACCTCCACTCCAGCCACTCTGCTGTCTTCCA...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATTTCCAGCTCTGCCCCTaGGAAGTGGGGTTGGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHFQLCP*EVGLGA Trigger: TGCTCCCAACCCCACTTCCCAGGGGCAGAGCTGGAA...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATCCTGGGAGGGGTTTCTaGTTGTCAACCCTCCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHPGRGF*LSTLQG Trigger: CCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGG...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATCCCTCCAAGGGACACTaGAGGTGGATGATGGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHPSKGH*RWMMGT Trigger: AGTCCCCATCATCCACCTGCAGTGTCCCTTGGAGGG...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATAAGGGACACTGCAGGTaGATGATGGGGACTCGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHKGHCR*MMGTRG Trigger: ACCCCGAGTCCCCATCATCCACCTGCAGTGTCCCTT...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CAA 90 bp | GCATGTCCCCCACTCTACAACAGGCCTTTTAGATTTCTGCATGGTTaGTGGCGAAGCCAGCCCAGGATCATGTCTCATTCACAGTTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ACPPLYNRPFRFLHG*WRSQPRIMSHSQLR Trigger: CCTTAACTGTGAATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTTGTAGAGTGGGGGACATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CCA 72 bp | TGGAGGTGGGGGCGCAGGTGGCAGGACCTTCACAGTTaGCAGGTGAGCATCGTGGGGTGCAGGCTGGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: WRWGRRWQDLHS*QVSIVGCRLGG Trigger: GCCGCCCAGCCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCCCCACCTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CCA 72 bp | CTGGTCCAGCACCTCTCCTGCTGTGGTGGAGCTAGCTaGGTGCAGGGTCCCCTTCCAGCTCTGCCCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVQHLSCCGGAS*VQGPLPALPLG Trigger: TCCCAGGGGCAGAGCTGGAAGGGGACCCTGCACCCAGCTAGCTCCACCACAGCAGGAGAGGTGCTGGACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR GCA 72 bp | CCCTACCCCAGACCCAAGGGTGCTCTGGTGAGGAGATaGAACCACCACTGTGCTCACCAGGAGGGCCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PYPRPKGALVRR*NHHCAHQEGLS Trigger: GGACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTTGGGTCTGGGGTAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR TCA 72 bp | GGCCGAGTCCTCAGGTGGCCAACAGCTGAGTCATACTaGTGGAGGAGGTCCCACCCCCAGGGGTTCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRVLRWPTAESY*WRRSHPQGFFG Trigger: TCCAAAGAACCCCTGGGGGTGGGACCTCCTCCATCAGTATGACTCAGCTGTTGGCCACCTGAGGACTCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR GCA 72 bp | AAGACAGGGAGCCCTGCCCTACCCCAGACCCAAGGGTaGTCTGGTGAGGAGATGCAACCACCACTGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KTGSPALPQTQG*SGEEMQPPLCS Trigger: TGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTTGGGTCTGGGGTAGGGCAGGGCTCCCTGTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR GCA 72 bp | CAAGGGTGCTCTGGTGAGGAGATGCAACCACCACTGTaGTCACCAGGAGGGCCTGTCCCTGACAACACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGCSGEEMQPPL*SPGGPVPDNTE Trigger: CTCAGTGTTGTCAGGGACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR TCA 72 bp | TGGGGCAGGACTGGAGAAGGCATGTCACCTCCACTGTaGCGATCCTATGAGACTAGGGAGGAGGGTGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WGRTGEGMSPPL*RSYETREEGGG Trigger: TCCTCCACCCTCCTCCCTAGTCTCATAGGATCGTCACAGTGGAGGTGACATGCCTTCTCCAGTCCTGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR GCA 72 bp | ATGTTTGCTGATGAAAGCCTGGTCCAGCACCTCTCCTaGTGTGGTGGAGCTAGCTGGGTGCAGGGTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: MFADESLVQHLS*CGGASWVQGPL Trigger: AAGGGGACCCTGCACCCAGCTAGCTCCACCACAGCAGGAGAGGTGCTGGACCAGGCTTTCATCAGCAAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CCA 72 bp | AGACATGTGGGAGCCCCATGTTTGCTGATGAAAGCCTaGTCCAGCACCTCTCCTGCTGTGGTGGAGCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RHVGAPCLLMKA*SSTSPAVVELA Trigger: AGCTAGCTCCACCACAGCAGGAGAGGTGCTGGACCAGGCTTTCATCAGCAAACATGGGGCTCCCACATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CCA 72 bp | GTTTCTGATTGTCAACCCTCCAAGGGACACTGCAGGTaGATGATGGGGACTCGGGGTCAATCAAGTGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: VSDCQPSKGHCR*MMGTRGQSSAL Trigger: CAGTGCACTTGATTGACCCCGAGTCCCCATCATCCACCTGCAGTGTCCCTTGGAGGGTTGACAATCAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CCA 72 bp | CAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTaGTACGATGGAGTTAAAAGTGCTTGCATGTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLVGKESGGQFT*YDGVKSACMSP Trigger: GGGGGACATGCAAGCACTTTTAACTCCATCGTACCAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTGGTACGATGGAGTTAAAAGTGCTTGCATGTCCCCCACTCTACAACAGGACCCCCAGGGGTTCTTaGGAAATGTGTCCACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPGTMELKVLACPPLYNRTPRGS*EMCPQR Trigger: CCTCTGTGGACACATTTCCAAAGAACCCCTGGGGGT...CCTGTTGTAGAGTGGGGGACATGCAAGCACTTTTAACTCCATCGTACCAGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR GCA 72 bp | GACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTaGATAGTAGTTCGGCTAGAACAGTCTACAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DQQGHGENGNSY*IVVRLEQSTGL Trigger: GAGGCCTGTAGACTGTTCTAGCCGAACTACTATGCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR GCA 72 bp | CATGTCCCCCACTCTACAACAGGCCTTTTAGATTTCTaGATGGTTTGTGGCGAAGCCAGCCCAGGATCATGT | + |
|
Preference number: 3 (lower is better) Translates to: HVPHSTTGLLDF*MVCGEASPGSC Trigger: ACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTTGTAGAGTGGGGGACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CCA 72 bp | CAAAACAGAATACAAAATCCTGGCGTTGACAGTTGGTaGGAAAGGAGTCCGGAGGTCAGTTCACCTGGTACG | + |
|
Preference number: 3 (lower is better) Translates to: QNRIQNPGVDSW*ERSPEVSSPGT Trigger: CGTACCAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTTGTATTCTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CCA 72 bp | CTCTACAACAGGCCTTTTAGATTTCTGCATGGTTTGTaGCGAAGCCAGCCCAGGATCATGTCTCATTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LYNRPFRFLHGL*RSQPRIMSHSQ Trigger: CTGTGAATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTTGTAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CAA 72 bp | GTGGAGGTGGGGGCGCAGGTGGCAGGACCTTCACAGTaGGCAGGTGAGCATCGTGGGGTGCAGGCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VEVGAQVAGPSQ*AGEHRGVQAGR Trigger: CCGCCCAGCCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCCCCACCTCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGAGAGGTGTGGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACAGACAGGCTAGCCCTCTaGCGCCGCTGGGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GWERCGVLTLRDPQPWKTDRLAL*RRWASL Trigger: CAAGCTGGCCCAGCGGCGCCAGAGGGCTAGCCTGTC...TGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCCACACCTCTCCCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GCCCTCTGGGGGCAACAGGAAGGTGAGAGCCCTGGGTATGGCCTCAGCTCTGGCCCTCCCGGAACACCCTaGTGCGGATGTGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALWGQQEGESPGYGLSSGPPGTP*CGCGPA Trigger: AGCTGGGCCACATCCGCAGCAGGGTGTTCCGGGAGG...GCCAGAGCTGAGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCCCAGAGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTTGCTTTCAATAGCGTCACACTGGGCCAGCTaGCGGTTCATGGCGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGGLSPPPSSGHLLSIASHWAS*RFMAMA Trigger: GGCCATCGCCATGAACCGGCAGCTGGCCCAGTGTGA...CGCTATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTTGCTTTCAATAGCGGCAGCACTCAGCCTCTaGTTGGCATCTCGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGGLSPPPSSGHLLSIAAALSL*LASRTS Trigger: GCTGGTCCGAGATGCCAAGCAGAGGCTGAGTGCTGC...CGCTATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACAGCAGAGTGGCTGGAGACCACAGGCTGGTCCTaGCCAGCGTCCTCCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GVLTLRDPQPWKTAEWLETTGWS*PASSSH Trigger: GTGTGAGGAGGACGCTGGGCAGGACCAGCCTGTGGT...CTCCAGCCACTCTGCTGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGAGAGGTGTGGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACAGCCGGTTCATGGCGATaGCCTCAGCCGCAAAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GWERCGVLTLRDPQPWKTAGSWR*PQPQRT Trigger: CGTCCTTTGCGGCTGAGGCCATCGCCATGAACCGGC...TGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCCACACCTCTCCCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GGGCGCAGGTGGCAGGACCTTCACAGTTGGCAGGTGAGCATCGTGGGGTGCAGGGCAGCACTCAGCCTCTaGTTGGCATCTCGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRRWQDLHSWQVSIVGCRAALSL*LASRTS Trigger: GCTGGTCCGAGATGCCAAGCAGAGGCTGAGTGCTGC...CCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GCCCTCTGGGGGCAACAGGAAGGTGAGAGCCCTGGGTATGGCCTCAGCTCTGGCGGATGCTGCAGGACTTaGGCAGCACTCAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALWGQQEGESPGYGLSSGGCCRT*AALSLC Trigger: GCAGAGGCTGAGTGCTGCCCAAGTCCTGCAGCATCC...GCCAGAGCTGAGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCCCAGAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGAGAGGTGTGGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACACAGCCGCAAAGGACGTaGGGTCTTTGGCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWERCGVLTLRDPQPWKTQPQRT*GLWHSC Trigger: ACAGCTGTGCCAAAGACCTCACGTCCTTTGCGGCTG...TGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCCACACCTCTCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACTCTGGGGCACACCCCTaGACCCAGGGATGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNSGAHP*TQGCCR Trigger: CCTGCAGCATCCCTGGGTGCAGGGGTGTGCCCCAGA...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGTCTGGGGCACACCCCTaGACCCAGGGATGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGSGAHP*TQGCCR Trigger: CCTGCAGCATCCCTGGGTGCAGGGGTGTGCCCCAGA...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGAGAGGTGTGGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACAGGAAGTCCAGGGCACTaGCCACGTCCTGTACTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GWERCGVLTLRDPQPWKTGSPGH*PRPVLP Trigger: TGGTAGTACAGGACGTGGCCAGTGCCCTGGACTTCC...TGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCCACACCTCTCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGTCCCTGACAACACTGACAGGCTAGCCCTCTaGCGCCGCTGGGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEMQPPLCSPGGPVPDNTDRLAL*RRWASL Trigger: CAAGCTGGCCCAGCGGCGCCAGAGGGCTAGCCTGTC...AGTGTTGTCAGGGACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCAGCTGCAGGCAGCGTaGGGTAGCTCGGATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNQLQAA*GSSDDH Trigger: GTGGTCATCCGAGCTACCTCACGCTGCCTGCAGCTG...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | AAGGGTGCTCTGGTGAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGCAGCTGCAGGCAGCGTaGGGTAGCTCGGATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGALVRRCNHHCAHQEGLQLQAA*GSSDDH Trigger: GTGGTCATCCGAGCTACCTCACGCTGCCTGCAGCTG...CAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | GCCCTCTGGGGGCAACAGGAAGGTGAGAGCCCTGGGTATGGCCTCAGCTCTGGCGAACGGTGGAAGCCCTaGAGTTCGGCTGTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALWGQQEGESPGYGLSSGERWKP*SSAVLF Trigger: GAAGAGAACAGCCGAACTTCAGGGCTTCCACCGTTC...GCCAGAGCTGAGGCCATACCCAGGGCTCTCACCTTCCTGTTGCCCCCAGAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGTCCCTGACAACACTCCTCCCGGAACACCCTaGTGCGGATGTGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEMQPPLCSPGGPVPDNTPPGTP*CGCGPA Trigger: AGCTGGGCCACATCCGCAGCAGGGTGTTCCGGGAGG...AGTGTTGTCAGGGACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | AAGGGTGCTCTGGTGAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGGAGGGTGGGGACAGCTaGAGGCAGCGTGAGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGALVRRCNHHCAHQEGLEGGDS*RQREVA Trigger: AGCTACCTCACGCTGCCTGCAGCTGTCCCCACCCTC...CAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGACCTTCACAGTTGGCAGGTGAGCATCGTGGGGTGCAGGCTGGGCGGCCTTCAAACAGCATGTTCTaGCAGGCAGGACAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPSQLAGEHRGVQAGRPSNSMF*QAGQAS Trigger: GGAGGCCTGTCCTGCCTGCCAGAACATGCTGTTTGA...AGGCCGCCCAGCCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGGCGTCCTCCTCACACTaGGCCAGCTGCCGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGASSSH*ASCRFM Trigger: CATGAACCGGCAGCTGGCCCAGTGTGAGGAGGACGC...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGTGCTCTGGTGAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGGCGTCCTCCTCACACTaGGCCAGCTGCCGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KGALVRRCNHHCAHQEGLASSSH*ASCRFM Trigger: CATGAACCGGCAGCTGGCCCAGTGTGAGGAGGACGC...CAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | GAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGTCCCTGACAACACTGGCCATGTACTCAGCTaGCCCACACGGGGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEMQPPLCSPGGPVPDNTGHVLS*PTRGEQ Trigger: CTGCTCACCCCGTGTGGGTCAGCTGAGTACATGGCC...AGTGTTGTCAGGGACAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCCAGCCGCAAAGGACGTaGGGTCTTTGGCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAAAPDQQGHGENGNSYCQPQRT*GLWHSC Trigger: ACAGCTGTGCCAAAGACCTCACGTCCTTTGCGGCTG...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGCTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTTGCTTTCAATTCTCTTCTTGGCATCTaGGATGTCAATGGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQAGRPEPSALLRALAFNSLLGI*DVNGLA Trigger: AGCCAGCCCATTGACATCCCAGATGCCAAGAAGAGA...ATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAGCCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GGGCGCAGGTGGCAGGACCTTCACAGTTGGCAGGTGAGCATCGTGGGGTGCAGGTCCGGCCTCTCTTCTTaGCATCTGGGATGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRWQDLHSWQVSIVGCRSGLSS*HLGCQW Trigger: CCATTGACATCCCAGATGCCAAGAAGAGAGGCCGGA...CCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGAGAGGTGTGGGGTGCTGACCCTGCGGGATCCCCAACCCTGGAAGACATCCGGCCTCTCTTCTTaGCATCTGGGATGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GWERCGVLTLRDPQPWKTSGLSS*HLGCQW Trigger: CCATTGACATCCCAGATGCCAAGAAGAGAGGCCGGA...TGTCTTCCAGGGTTGGGGATCCCGCAGGGTCAGCACCCCACACCTCTCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCACCCTGCTGCGGATGTaGCCCAGCTGCTTCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LAAAPDQQGHGENGNSYCTLLRM*PSCFSM Trigger: CATTGAGAAGCAGCTGGGCCACATCCGCAGCAGGGT...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCGGAAGTCCAGGGCACTaGCCACGTCCTGTACTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LAAAPDQQGHGENGNSYCGSPGH*PRPVLP Trigger: TGGTAGTACAGGACGTGGCCAGTGCCCTGGACTTCC...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCTGTCAATGGGCTGGCTaGAAGGCATGTCAGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAAAPDQQGHGENGNSYCCQWAG*KACQVG Trigger: CCCGACCTGACATGCCTTCCAGCCAGCCCATTGACA...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTTGCTTTCAATAGCGAAGTGGCGCCTTCTATaGATGTGGCTTAGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLGGLSPPPSSGHLLSIAKWRLL*MWLRMD Trigger: ATCCATCCTAAGCCACATCCATAGAAGGCGCCACTT...CGCTATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GTGCACTGTCCCCATCCACCTGCTCCCCAGAGGTCTCTATCCAAGACAGGGAGCGTCGCAGATCTTCACTaGCGAGACCTGGTTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHCPHPPAPQRSLSKTGSVADLH*RDLVGV Trigger: CACCCCAACCAGGTCTCGCCAGTGAAGATCTGCGAC...GCTCCCTGTCTTGGATAGAGACCTCTGGGGAGCAGGTGGATGGGGACAGTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCGCAGCAAAGGAGATGTaGGACCAGTCCTTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAAAPDQQGHGENGNSYCAAKEM*DQSLSG Trigger: CCCTGACAAGGACTGGTCCCACATCTCCTTTGCTGC...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCGGGATGTCAATGGGCTaGCTGGAAGGCATGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAAAPDQQGHGENGNSYCGMSMG*LEGMSG Trigger: ACCTGACATGCCTTCCAGCCAGCCCATTGACATCCC...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | GTGCACTGTCCCCATCCACCTGCTCCCCAGAGGTCTCTATCCAAGACAGGGAGCATCTTCGAACCTGCCTaGGAAGCTGTCAGTAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VHCPHPPAPQRSLSKTGSIFEPA*EAVSSP Trigger: CGGGCTACTGACAGCTTCTCAGGCAGGTTCGAAGAT...GCTCCCTGTCTTGGATAGAGACCTCTGGGGAGCAGGTGGATGGGGACAGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTTCACACTGTGGGCTaGAGTCAGAGTCCCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNLHTVG*SQSPCA Trigger: AGCACAGGGACTCTGACTTCAGCCCACAGTGTGAAG...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GGGCGCAGGTGGCAGGACCTTCACAGTTGGCAGGTGAGCATCGTGGGGTGCAGGACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRRWQDLHSWQVSIVGCRTCPPG*SQTACS Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...CCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGCCACCTGCGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GCAGGACCTTCACAGTTGGCAGGTGAGCATCGTGGGGTGCAGGCTGGGCGGCCTACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGPSQLAGEHRGVQAGRPTCPPG*SQTACS Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...AGGCCGCCCAGCCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGACCTTCACAGTTGGCAGGTGAGCATCGTGGGGTGCAGGCTGGGCGGCCTAAGTGGCGCCTTCTATaGATGTGGCTTAGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGPSQLAGEHRGVQAGRPKWRLL*MWLRMD Trigger: ATCCATCCTAAGCCACATCCATAGAAGGCGCCACTT...AGGCCGCCCAGCCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | AAAATCCTGGCGTTGACAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTGGGCCATGTACTCAGCTaGCCCACACGGGGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KILALTVGGKGVRRSVHLGHVLS*PTRGEQ Trigger: CTGCTCACCCCGTGTGGGTCAGCTGAGTACATGGCC...CAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | AAAATCCTGGCGTTGACAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTGTCACACTGGGCCAGCTaGCGGTTCATGGCGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KILALTVGGKGVRRSVHLSHWAS*RFMAMA Trigger: GGCCATCGCCATGAACCGGCAGCTGGCCCAGTGTGA...CAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | AAAATCCTGGCGTTGACAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTGACCACAGGCTGGTCCTaGCCAGCGTCCTCCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KILALTVGGKGVRRSVHLTTGWS*PASSSH Trigger: GTGTGAGGAGGACGCTGGGCAGGACCAGCCTGTGGT...CAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCACATTCCTATGTCCCTaGCACTGGTACAGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAAAPDQQGHGENGNSYCTFLCP*HWYSIS Trigger: GGAGATGCTGTACCAGTGCCAGGGACATAGGAATGT...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | AAAATCCTGGCGTTGACAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTGGCCGGTTCATGGCGATaGCCTCAGCCGCAAAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: KILALTVGGKGVRRSVHLAGSWR*PQPQRT Trigger: CGTCCTTTGCGGCTGAGGCCATCGCCATGAACCGGC...CAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGGCCGCTGGGCCAGCTTaGACTGGGAGGGTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMAAGPA*TGRVGT Trigger: TGTCCCCACCCTCCCAGTCCAAGCTGGCCCAGCGGC...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGAATCTTCGAACCTGCCTaGGAAGCTGTCAGTAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKELSSLGGVSDCQPSKGIFEPA*EAVSSP Trigger: CGGGCTACTGACAGCTTCTCAGGCAGGTTCGAAGAT...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCGGATGTGGCCCAGCTaGTTCTCAATGATCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNRMWPS*FSMILT Trigger: TGTCAAGATCATTGAGAAGCAGCTGGGCCACATCCG...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGTCTCTTCTTGGCATCTaGGATGTCAATGGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGSLLGI*DVNGLA Trigger: AGCCAGCCCATTGACATCCCAGATGCCAAGAAGAGA...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGACTGGCGAGACCTGGTTaGGGTGCTCACATAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GKELSSLGGVSDCQPSKGLARPG*GAHIGC Trigger: ACATCCTATGTGAGCACCCCAACCAGGTCTCGCCAG...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGATTCACTGGCGAGACCTaGTTGGGGTGCTCACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKELSSLGGVSDCQPSKGFTGET*LGCSHR Trigger: CCTATGTGAGCACCCCAACCAGGTCTCGCCAGTGAA...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| 3UTR CAA 72 bp | CTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTaGCTTTCAATAGCGGCAAAGAAAAACAAACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGGLSPPPSSGH*LSIAAKKNKQN Trigger: GTTTTGTTTGTTTTTCTTTGCCGCTATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR GCA 90 bp | TCACCTGGTACGATGGAGTTAAAAGTGCTTGCATGTCCCCCACTCTACAACAGGGAGGGTGGGGACAGCTaGAGGCAGCGTGAGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGTMELKVLACPPLYNREGGDS*RQREVA Trigger: AGCTACCTCACGCTGCCTGCAGCTGTCCCCACCCTC...CCTGTTGTAGAGTGGGGGACATGCAAGCACTTTTAACTCCATCGTACCAGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR TCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTGCTGGCCTCTTCACTaGAGGCCTCCACCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMCWPLH*RPPPPL Trigger: CAGAGGTGGTGGAGGCCTTCAGTGAAGAGGCCAGCA...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGAACATTCCTATGTCCCTaGCACTGGTACAGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKELSSLGGVSDCQPSKGTFLCP*HWYSIS Trigger: GGAGATGCTGTACCAGTGCCAGGGACATAGGAATGT...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | AAAATCCTGGCGTTGACAGTTGGTGGGAAAGGAGTCCGGAGGTCAGTTCACCTGGCAGCAAAGGAGATGTaGGACCAGTCCTTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KILALTVGGKGVRRSVHLAAKEM*DQSLSG Trigger: CCCTGACAAGGACTGGTCCCACATCTCCTTTGCTGC...CAGGTGAACTGACCTCCGGACTCCTTTCCCACCAACTGTCAACGCCAGGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | TCACCTGGTACGATGGAGTTAAAAGTGCTTGCATGTCCCCCACTCTACAACAGGGGATGCTGCAGGACTTaGGCAGCACTCAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGTMELKVLACPPLYNRGCCRT*AALSLC Trigger: GCAGAGGCTGAGTGCTGCCCAAGTCCTGCAGCATCC...CCTGTTGTAGAGTGGGGGACATGCAAGCACTTTTAACTCCATCGTACCAGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGGTCGCAGATCTTCACTaGCGAGACCTGGTTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMVADLH*RDLVGV Trigger: CACCCCAACCAGGTCTCGCCAGTGAAGATCTGCGAC...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | TCACCTGGTACGATGGAGTTAAAAGTGCTTGCATGTCCCCCACTCTACAACAGGCTATGTCCCTGGCACTaGTACAGCATCTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGTMELKVLACPPLYNRLCPWH*YSISTS Trigger: GGAGGTGGAGATGCTGTACCAGTGCCAGGGACATAG...CCTGTTGTAGAGTGGGGGACATGCAAGCACTTTTAACTCCATCGTACCAGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGCTATGTCCCTGGCACTaGTACAGCATCTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMLCPWH*YSISTS Trigger: GGAGGTGGAGATGCTGTACCAGTGCCAGGGACATAG...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCAAACAGCATGTTCTaGCAGGCAGGACAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMSNSMF*QAGQAS Trigger: GGAGGCCTGTCCTGCCTGCCAGAACATGCTGTTTGA...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATCTGGCGAGACCTGGTTaGGGTGCTCACATAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHLARPG*GAHIGC Trigger: ACATCCTATGTGAGCACCCCAACCAGGTCTCGCCAG...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
||
| CDS-3UTR CCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATTTCACTGGCGAGACCTaGTTGGGGTGCTCACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHFTGET*LGCSHR Trigger: CCTATGTGAGCACCCCAACCAGGTCTCGCCAGTGAA...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR CAA 72 bp | CGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATaGCATAGTAGTTCGGCTAGAACAGTCTACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPAGPWRKWELV*HSSSARTVYRP Trigger: AGGCCTGTAGACTGTTCTAGCCGAACTACTATGCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR GCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATCGGATGTGGCCCAGCTaGTTCTCAATGATCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHRMWPS*FSMILT Trigger: TGTCAAGATCATTGAGAAGCAGCTGGGCCACATCCG...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR GCA 90 bp | CCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGTCTCATGAGACCTGGTTGGGGTaGTCACATAGGATGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFRFLHGLWRSQPRIMSHETWLG*SHRMFS Trigger: AGAGAACATCCTATGTGAGCACCCCAACCAGGTCTC...ATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| 3UTR CAA 72 bp | CCACTCTACAACAGGCCTTTTAGATTTCTGCATGGTTaGTGGCGAAGCCAGCCCAGGATCATGTCTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLYNRPFRFLHG*WRSQPRIMSHS Trigger: TGAATGAGACATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTTGTAGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 90 bp | ACAAGGACCACAGGGGTGGCCGACAGGCTAGCCCTCTGGCGCCGCTaGGCCAGCTTGGACTGGGAGGGTGGGGACAGCTGCAGGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TRTTGVADRLALWRR*ASLDWEGGDSCRQR Trigger: ACGCTGCCTGCAGCTGTCCCCACCCTCCCAGTCCAAGCTGGCCCAGCGGCGCCAGAGGGCTAGCCTGTCGGCCACCCCTGTGGTCCTTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS GCA 90 bp | AGCTGCAGGCAGCGTGAGGTAGCTCGGATGACCACAGGCTGGTCCTaGCCAGCGTCCTCCTCACACTGGGCCAGCTGCCGGTTCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SCRQREVARMTTGWS*PASSSHWASCRFMA Trigger: CGCCATGAACCGGCAGCTGGCCCAGTGTGAGGAGGACGCTGGGCAGGACCAGCCTGTGGTCATCCGAGCTACCTCACGCTGCCTGCAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GTGCAGGCTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTTGCTTTCAATGCACTCAGCCTCTGCTaGGCATCTCGGACCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VQAGRPEPSALLRALAFNALSLC*ASRTSS Trigger: GCTGCTGGTCCGAGATGCCAAGCAGAGGCTGAGTGC...ATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAGCCTGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | AGGCTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTTGCTTTCAATAGCGACTGGCGAGACCTGGTaGGGGTGCTCACATAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RLGGLSPPPSSGHLLSIATGETW*GCSHRM Trigger: CATCCTATGTGAGCACCCCAACCAGGTCTCGCCAGT...CGCTATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS GCA 90 bp | TGCAGAACCAAGGGTGTCGGTAGGGTGTTCTCTGGGGCACACCCCTaGACCCAGGGATGCTGCAGGACTTGGGCAGCACTCAGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CRTKGVGRVFSGAHP*TQGCCRTWAALSLC Trigger: GCAGAGGCTGAGTGCTGCCCAAGTCCTGCAGCATCCCTGGGTGCAGGGGTGTGCCCCAGAGAACACCCTACCGACACCCTTGGTTCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | AAGGGTGCTCTGGTGAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGGGGATGCTGCAGGACTaGGGCAGCACTCAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGALVRRCNHHCAHQEGLGMLQD*GSTQPL Trigger: CAGAGGCTGAGTGCTGCCCAAGTCCTGCAGCATCCC...CAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS TCA 90 bp | TGGGCTGGCTGGAAGGCATGTCAGGTCGGGCTTCACACTGTGGGCTaGAGTCAGAGTCCCTGTGCTGGGCGAGGTCTAAGGAGAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WAGWKACQVGLHTVG*SQSPCAGRGLRRRP Trigger: TGGCCTTCTCCTTAGACCTCGCCCAGCACAGGGACTCTGACTTCAGCCCACAGTGTGAAGCCCGACCTGACATGCCTTCCAGCCAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS GCA 90 bp | GCCTCAGCCGCAAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTaGAGAACCAAGGGTGTCGGTAGGGTGTTCTCTGGGGCACACCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASAAKDVRSLAQLFL*RTKGVGRVFSGAHP Trigger: GGGGTGTGCCCCAGAGAACACCCTACCGACACCCTTGGTTCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTTGCGGCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GCAGGACCTTCACAGTTGGCAGGTGAGCATCGTGGGGTGCAGGCTGGGCGGCCTTTCCGGCCTCTCTTCTaGGCATCTGGGATGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AGPSQLAGEHRGVQAGRPFRPLF*ASGMSM Trigger: CATTGACATCCCAGATGCCAAGAAGAGAGGCCGGAA...AGGCCGCCCAGCCTGCACCCCACGATGCTCACCTGCCAACTGTGAAGGTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GTGCAGGCTGGGCGGCCTGAGCCCTCCGCCCTCCTCCGGGCACTTGCTTTCAATATGTGGGACCAGTCCTaGTCAGGGAACTCATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VQAGRPEPSALLRALAFNMWDQS*SGNSYL Trigger: CAAGTATGAGTTCCCTGACAAGGACTGGTCCCACAT...ATTGAAAGCAAGTGCCCGGAGGAGGGCGGAGGGCTCAGGCCGCCCAGCCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GTGCACTGTCCCCATCCACCTGCTCCCCAGAGGTCTCTATCCAAGACAGGGAGCACTGGCGAGACCTGGTaGGGGTGCTCACATAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VHCPHPPAPQRSLSKTGSTGETW*GCSHRM Trigger: CATCCTATGTGAGCACCCCAACCAGGTCTCGCCAGT...GCTCCCTGTCTTGGATAGAGACCTCTGGGGAGCAGGTGGATGGGGACAGTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGAGGGATGCTGCAGGACTaGGGCAGCACTCAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKELSSLGGVSDCQPSKGGMLQD*GSTQPL Trigger: CAGAGGCTGAGTGCTGCCCAAGTCCTGCAGCATCCC...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | CTGGCAGCCGCCCCCGACCAGCAGGGCCATGGAGAAAATGGGAACTCGTATTGCAAGGACGTGAGGTCTTaGGCACAGCTGTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAAAPDQQGHGENGNSYCKDVRS*AQLFLC Trigger: GCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTT...GCAATACGAGTTCCCATTTTCTCCATGGCCCTGCTGGTCGGGGGCGGCTGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 90 bp | CTGGCCACGTCCTGTACTACCACGCTGGCCTCCAGCTCGTTAAAGTaGCGCCTTCTATGGATGTGGCTTAGGATGGATCCGCCACGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LATSCTTTLASSSLK*RLLWMWLRMDPPRI Trigger: GATGCGTGGCGGATCCATCCTAAGCCACATCCATAGAAGGCGCCACTTTAACGAGCTGGAGGCCAGCGTGGTAGTACAGGACGTGGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGTGGGCGATGCCTTaGTTATGCAGGAAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNLWAMP*LCRKSR Trigger: CCTGGACTTCCTGCATAACAAAGGCATCGCCCACAG...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 90 bp | AGCGCTTCTTTTTCCGGCCTCTCTTCTTGGCATCTGGGATGTCAATaGGCTGGCTGGAAGGCATGTCAGGTCGGGCTTCACACTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SASFSGLSSWHLGCQ*AGWKACQVGLHTVG Trigger: GCCCACAGTGTGAAGCCCGACCTGACATGCCTTCCAGCCAGCCCATTGACATCCCAGATGCCAAGAAGAGAGGCCGGAAAAAGAAGCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS CCA 90 bp | AGTAGCCCGACAGCGCTTCTTTTTCCGGCCTCTCTTCTTGGCATCTaGGATGTCAATGGGCTGGCTGGAAGGCATGTCAGGTCGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSPTALLFPASLLGI*DVNGLAGRHVRSGF Trigger: GAAGCCCGACCTGACATGCCTTCCAGCCAGCCCATTGACATCCCAGATGCCAAGAAGAGAGGCCGGAAAAAGAAGCGCTGTCGGGCTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACCTGCAGGGTTCCGGCCTCTCTTCTaGGCATCTGGGATGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VGVNAAHCPVRLLQEPAGFRPLF*ASGMSM Trigger: CATTGACATCCCAGATGCCAAGAAGAGAGGCCGGAA...CCCTGCAGGTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS TCA 90 bp | CCCCAGCACATCCTCCTGCAGCTGATAGACATCTTCGAACCTGCCTaGGAAGCTGTCAGTAGCCCGACAGCGCTTCTTTTTCCGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQHILLQLIDIFEPA*EAVSSPTALLFPAS Trigger: AGAGGCCGGAAAAAGAAGCGCTGTCGGGCTACTGACAGCTTCTCAGGCAGGTTCGAAGATGTCTATCAGCTGCAGGAGGATGTGCTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003433.11 ENSMUST00000197276.2 ENSMUST00000198819.2 ENSMUST00000200082.5 |
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| CDS GCA 90 bp | ATGTCAGGTCGGGCTTCACACTGTGGGCTGAAGTCAGAGTCCCTGTaGTGGGCGAGGTCTAAGGAGAAGGCCAACTCGAAAGGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MSGRASHCGLKSESL*WARSKEKANSKGFC Trigger: GCAGAATCCTTTCGAGTTGGCCTTCTCCTTAGACCTCGCCCAGCACAGGGACTCTGACTTCAGCCCACAGTGTGAAGCCCGACCTGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | AAGGGTGCTCTGGTGAGGAGATGCAACCACCACTGTGCTCACCAGGAGGGCCTGTGGTTGGTGATGAGATaGACACAGGTCTGCACACGA | + |
|
Preference number: 5 (lower is better) Translates to: KGALVRRCNHHCAHQEGLWLVMR*TQVCTR Trigger: TCGTGTGCAGACCTGTGTCAATCTCATCACCAACCA...CAGGCCCTCCTGGTGAGCACAGTGGTGGTTGCATCTCCTCACCAGAGCACCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GGGGGTGAGTGGGGGTCAATGCTGCTCACTGCCCAGTCAGGTTGCTTCAGGAACATGTGGGACCAGTCCTaGTCAGGGAACTCATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGEWGSMLLTAQSGCFRNMWDQS*SGNSYL Trigger: CAAGTATGAGTTCCCTGACAAGGACTGGTCCCACAT...GTTCCTGAAGCAACCTGACTGGGCAGTGAGCAGCATTGACCCCCACTCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGAAAGGACGTGAGGTCTTaGGCACAGCTGTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKELSSLGGVSDCQPSKGKDVRS*AQLFLC Trigger: GCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTT...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 90 bp | TTCTTTTTCCGGCCTCTCTTCTTGGCATCTGGGATGTCAATGGGCTaGCTGGAAGGCATGTCAGGTCGGGCTTCACACTGTGGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FFFRPLFLASGMSMG*LEGMSGRASHCGLK Trigger: CTTCAGCCCACAGTGTGAAGCCCGACCTGACATGCCTTCCAGCCAGCCCATTGACATCCCAGATGCCAAGAAGAGAGGCCGGAAAAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | AACAGGCCTTTTAGATTTCTGCATGGTTTGTGGCGAAGCCAGCCCAGGATCATGGCACTCAGCCTCTGCTaGGCATCTCGGACCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NRPFRFLHGLWRSQPRIMALSLC*ASRTSS Trigger: GCTGCTGGTCCGAGATGCCAAGCAGAGGCTGAGTGC...CATGATCCTGGGCTGGCTTCGCCACAAACCATGCAGAAATCTAAAAGGCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 90 bp | TGTACTACCACGCTGGCCTCCAGCTCGTTAAAGTGGCGCCTTCTATaGATGTGGCTTAGGATGGATCCGCCACGCATCTTCTCAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: CTTTLASSSLKWRLL*MWLRMDPPRIFSNT Trigger: GGTGTTTGAGAAGATGCGTGGCGGATCCATCCTAAGCCACATCCATAGAAGGCGCCACTTTAACGAGCTGGAGGCCAGCGTGGTAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS-3UTR CAA 90 bp | GGCAAGGAGCTAAGCAGCCTGGGAGGGGTTTCTGATTGTCAACCCTCCAAGGGATGGTTGGTGATGAGATaGACACAGGTCTGCACACGA | + |
|
Preference number: 5 (lower is better) Translates to: GKELSSLGGVSDCQPSKGWLVMR*TQVCTR Trigger: TCGTGTGCAGACCTGTGTCAATCTCATCACCAACCA...TCCCTTGGAGGGTTGACAATCAGAAACCCCTCCCAGGCTGCTTAGCTCCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS GCA 72 bp | CAGCGTGAGGTAGCTCGGATGACCACAGGCTGGTCCTaGCCAGCGTCCTCCTCACACTGGGCCAGCTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QREVARMTTGWS*PASSSHWASCR Trigger: CCGGCAGCTGGCCCAGTGTGAGGAGGACGCTGGGCAGGACCAGCCTGTGGTCATCCGAGCTACCTCACGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 72 bp | CTGGCTGGAAGGCATGTCAGGTCGGGCTTCACACTGTaGGCTGAAGTCAGAGTCCCTGTGCTGGGCGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LAGRHVRSGFTL*AEVRVPVLGEV Trigger: GACCTCGCCCAGCACAGGGACTCTGACTTCAGCCCACAGTGTGAAGCCCGACCTGACATGCCTTCCAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS TCA 72 bp | TGGAAGGCATGTCAGGTCGGGCTTCACACTGTGGGCTaGAGTCAGAGTCCCTGTGCTGGGCGAGGTCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WKACQVGLHTVG*SQSPCAGRGLR Trigger: CCTTAGACCTCGCCCAGCACAGGGACTCTGACTTCAGCCCACAGTGTGAAGCCCGACCTGACATGCCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS CCA 72 bp | CGGCCTCTCTTCTTGGCATCTGGGATGTCAATGGGCTaGCTGGAAGGCATGTCAGGTCGGGCTTCACACTGT | + |
|
Preference number: 6 (lower is better) Translates to: RPLFLASGMSMG*LEGMSGRASHC Trigger: ACAGTGTGAAGCCCGACCTGACATGCCTTCCAGCCAGCCCATTGACATCCCAGATGCCAAGAAGAGAGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS GCA 72 bp | GCAAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTaGAGAACCAAGGGTGTCGGTAGGGTGTTCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AKDVRSLAQLFL*RTKGVGRVFSG Trigger: CCCAGAGAACACCCTACCGACACCCTTGGTTCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 72 bp | ACGCTGGCCTCCAGCTCGTTAAAGTGGCGCCTTCTATaGATGTGGCTTAGGATGGATCCGCCACGCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TLASSSLKWRLL*MWLRMDPPRIF Trigger: GAAGATGCGTGGCGGATCCATCCTAAGCCACATCCATAGAAGGCGCCACTTTAACGAGCTGGAGGCCAGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 72 bp | TTTTCCGGCCTCTCTTCTTGGCATCTGGGATGTCAATaGGCTGGCTGGAAGGCATGTCAGGTCGGGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FSGLSSWHLGCQ*AGWKACQVGLH Trigger: GTGAAGCCCGACCTGACATGCCTTCCAGCCAGCCCATTGACATCCCAGATGCCAAGAAGAGAGGCCGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS CCA 72 bp | TCCTGTACTACCACGCTGGCCTCCAGCTCGTTAAAGTaGCGCCTTCTATGGATGTGGCTTAGGATGGATCCG | + |
|
Preference number: 6 (lower is better) Translates to: SCTTTLASSSLK*RLLWMWLRMDP Trigger: CGGATCCATCCTAAGCCACATCCATAGAAGGCGCCACTTTAACGAGCTGGAGGCCAGCGTGGTAGTACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CCA 72 bp | GCCTCCAGCTCGTTAAAGTGGCGCCTTCTATGGATGTaGCTTAGGATGGATCCGCCACGCATCTTCTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSLKWRLLWM*LRMDPPRIFSN Trigger: GTTTGAGAAGATGCGTGGCGGATCCATCCTAAGCCACATCCATAGAAGGCGCCACTTTAACGAGCTGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS CAA 90 bp | CGGAACACCCTGCTGCGGATGTGGCCCAGCTGCTTCTCAATGATCTaGACAGCATATTCCTGGTTGGTGATGAGATTGACACAGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RNTLLRMWPSCFSMI*TAYSWLVMRLTQVC Trigger: GCAGACCTGTGTCAATCTCATCACCAACCAGGAATATGCTGTCAAGATCATTGAGAAGCAGCTGGGCCACATCCGCAGCAGGGTGTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003433.11 ENSMUST00000197276.2 ENSMUST00000200082.5 |
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| CDS CAA 72 bp | TCTGGTGTGGAGATGGGGGAGCAGTCTCCATTGAGTTaGATACCACTGCCAAGGTCGAAGTCGCAGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGVEMGEQSPLS*IPLPRSKSQIF Trigger: GAAGATCTGCGACTTCGACCTTGGCAGTGGTATCAAACTCAATGGAGACTGCTCCCCCATCTCCACACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003433.11 ENSMUST00000200082.5 |
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| CDS TCA 72 bp | ATCCTCCTGCAGCTGATAGACATCTTCGAACCTGCCTaGGAAGCTGTCAGTAGCCCGACAGCGCTTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ILLQLIDIFEPA*EAVSSPTALLF Trigger: AAAAAGAAGCGCTGTCGGGCTACTGACAGCTTCTCAGGCAGGTTCGAAGATGTCTATCAGCTGCAGGAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003433.11 ENSMUST00000197276.2 ENSMUST00000198819.2 ENSMUST00000200082.5 |
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| CDS CAA 72 bp | CTGCTGCGGATGTGGCCCAGCTGCTTCTCAATGATCTaGACAGCATATTCCTGGTTGGTGATGAGATTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LLRMWPSCFSMI*TAYSWLVMRLT Trigger: TGTCAATCTCATCACCAACCAGGAATATGCTGTCAAGATCATTGAGAAGCAGCTGGGCCACATCCGCAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003433.11 ENSMUST00000197276.2 ENSMUST00000200082.5 |
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