Pregenerated sensors for MKNK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028708Ensembl transcript IDs: ENSMUST00000019677.12, ENSMUST00000106513.10, ENSMUST00000130819.8, ENSMUST00000144427.8, ENSMUST00000151203.8
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTGCAGCCCCTGCAGCCCCAACCGCAAGCTGGATCCGGGATCTaGACATCAGCAGCCTTTGGAGCCCGGCAGAGACGGTCCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: RLQPLQPQPQAGSGI*TSAAFGARQRRSCC Trigger: GCAGCAGGACCGTCTCTGCCGGGCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGCGGTTGGGGCTGCAGGGGCTGCAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR TCA 90 bp | GCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGCTGGACTCCCTaGAGGCTGCAGCCCCTGCAGCCCCAACCGCAAGCTGGATCCGGG | + |
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Preference number: 1 (lower is better) Translates to: ACTSADLSAPGSWTP*RLQPLQPQPQAGSG Trigger: CCCGGATCCAGCTTGCGGTTGGGGCTGCAGGGGCTGCAGCCTTCAGGGAGTCCAGCTTCCAGGAGCTGACAGATCTGCGGACGTGCATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR GCA 90 bp | ATCTGTCAGCTCCTGGAAGCTGGACTCCCTGAAGGCTGCAGCCCCTaGAGCCCCAACCGCAAGCTGGATCCGGGATCTGCACATCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ICQLLEAGLPEGCSP*SPNRKLDPGSAHQQ Trigger: CTGCTGATGTGCAGATCCCGGATCCAGCTTGCGGTTGGGGCTGCAGGGGCTGCAGCCTTCAGGGAGTCCAGCTTCCAGGAGCTGACAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR TCA 90 bp | ATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTaGCTACCCTGGGTTTGTGGAGGCAGCAGCGGCAGACAGAGATGC | + |
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Preference number: 1 (lower is better) Translates to: IPHSRAQGFLSDTAV*LPWVCGGSSGRQRC Trigger: GCATCTCTGTCTGCCGCTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGCTGGACAAGGCCTGCAGGGGCTaGAGGGCAGGTCCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: VQGRGMHVRRSVSSWKLDKACRG*RAGPSA Trigger: GGCAGAGGGACCTGCCCTGCAGCCCCTGCAGGCCTT...GTCCAGCTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGAAGGCCTGCAGGGGCTaGAGGGCAGGTCCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKKACRG*RAGPSA Trigger: GGCAGAGGGACCTGCCCTGCAGCCCCTGCAGGCCTT...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR CCA 90 bp | CCGCAAGCTGGATCCGGGATCTGCACATCAGCAGCCTTTGGAGCCCGGCAGAGACAGGGAAATGGGGGATaGGTGGGAACCCGGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PQAGSGICTSAAFGARQRQGNGG*VGTREP Trigger: AGGCTCCCGGGTTCCCACCCATCCCCCATTTCCCTG...TCTCTGCCGGGCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGGGAAGCTGGACTCCCTaGAGGCTGCAGCCCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWGSWTP*RLQPLQ Trigger: CTGCAGGGGCTGCAGCCTTCAGGGAGTCCAGCTTCC...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | CCGCAAGCTGGATCCGGGATCTGCACATCAGCAGCCTTTGGAGCCCGGCAGAGATGGATGGTAAAGGCCTaGAGGGGCTGCAGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PQAGSGICTSAAFGARQRWMVKA*RGCRAG Trigger: ACCTGCCCTGCAGCCCCTGCAGGCCTTTACCATCCA...TCTCTGCCGGGCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGGAAGGCTGCAGCCCCTaGAGCCCCAACCGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKEGCSP*SPNRKL Trigger: CAGCTTGCGGTTGGGGCTGCAGGGGCTGCAGCCTTC...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGGAAGGCTGCAGCCCCTaGAGCCCCAACCGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWEGCSP*SPNRKL Trigger: CAGCTTGCGGTTGGGGCTGCAGGGGCTGCAGCCTTC...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGAGGCAGCAGGGACTCCCTGAAGGCTaGAGCCCCTGCAGCCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: GLPLRHSSLTTLGLWRQQGLPEG*SPCSPN Trigger: GTTGGGGCTGCAGGGGCTGCAGCCTTCAGGGAGTCC...CTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGGGACTCCCTGAAGGCTaGAGCCCCTGCAGCCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWGLPEG*SPCSPN Trigger: GTTGGGGCTGCAGGGGCTGCAGCCTTCAGGGAGTCC...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGCAGGGAAATGGGGGATaGGTGGGAACCCGGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWQGNGG*VGTREP Trigger: AGGCTCCCGGGTTCCCACCCATCCCCCATTTCCCTG...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGTGGATGGTAAAGGCCTaGAGGGGCTGCAGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKWMVKA*RGCRAG Trigger: ACCTGCCCTGCAGCCCCTGCAGGCCTTTACCATCCA...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGATCGCCAGAAGGAGGTaGCAGTGCAGGGAAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWIARRR*QCREEA Trigger: TGCCTCTTCCCTGCACTGTCACCTCCTTCTGGCGAT...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR CCA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGAAGACTCCAGGGAAATaGGGGATGGGTGGGAACCCG | + |
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Preference number: 2 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKKTPGK*GMGGNP Trigger: CGGGTTCCCACCCATCCCCCATTTCCCTGGAGTCTT...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR CAA 90 bp | GGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTaGTGGAGGCAGCAGCGGCAGACAGAGATGCAAAGACACCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: GTGLPLRHSSLTTLG*WRQQRQTEMQRHQS Trigger: AGACTGGTGTCTTTGCATCTCTGTCTGCCGCTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGCAGAGACGGTCCTGCTaGAGGCGATTATGCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKQRRSC*RRLCKV Trigger: CACTTTGCATAATCGCCTGCAGCAGGACCGTCTCTG...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR TCA 90 bp | CCGCAAGCTGGATCCGGGATCTGCACATCAGCAGCCTTTGGAGCCCGGCAGAGAAAAAGCTTTCTCCTTTaGAGACTCCAGGGAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: PQAGSGICTSAAFGARQRKSFLL*RLQGNG Trigger: CCCATTTCCCTGGAGTCTTCAAAGGAGAAAGCTTTT...TCTCTGCCGGGCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGAGGCAGCAGTGCTGCAGGCGATTATaGAAAGTGACAAGTGATTGC | + |
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Preference number: 2 (lower is better) Translates to: GLPLRHSSLTTLGLWRQQCCRRL*KVTSDC Trigger: GCAATCACTTGTCACTTTGCATAATCGCCTGCAGCA...CTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACCAGCAATCCCAAACATaGAAGAGGATGATAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: AAFLIAGHRASSQTQQSDQQSQT*KRMINE Trigger: CTCATTTATCATCCTCTTCCATGTTTGGGATTGCTG...GTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR TCA 90 bp | AGGAACATTTCGGTCACGGCAAAGAAAGATTATGTGCTTCTCTGTGTTACAGACAAAAGCTTTCTCCTTTaGAGACTCCAGGGAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: RNISVTAKKDYVLLCVTDKSFLL*RLQGNG Trigger: CCCATTTCCCTGGAGTCTTCAAAGGAGAAAGCTTTT...GTCTGTAACACAGAGAAGCACATAATCTTTCTTTGCCGTGACCGAAATGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR GCA 72 bp | CTCCTGGAAGCTGGACTCCCTGAAGGCTGCAGCCCCTaGAGCCCCAACCGCAAGCTGGATCCGGGATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LLEAGLPEGCSP*SPNRKLDPGSA Trigger: TGCAGATCCCGGATCCAGCTTGCGGTTGGGGCTGCAGGGGCTGCAGCCTTCAGGGAGTCCAGCTTCCAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR GCA 72 bp | GTGGGAACCCGGGAGCCTTTGTGGATGGTAAAGGCCTaGAGGGGCTGCAGGGCAGGTCCCTCTGCCTACTTC | + |
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Preference number: 3 (lower is better) Translates to: VGTREPLWMVKA*RGCRAGPSAYF Trigger: GAAGTAGGCAGAGGGACCTGCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR GCA 72 bp | ATCTGTCAGCTCCTGGAAGCTGGACTCCCTGAAGGCTaGAGCCCCTGCAGCCCCAACCGCAAGCTGGATCCG | + |
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Preference number: 3 (lower is better) Translates to: ICQLLEAGLPEG*SPCSPNRKLDP Trigger: CGGATCCAGCTTGCGGTTGGGGCTGCAGGGGCTGCAGCCTTCAGGGAGTCCAGCTTCCAGGAGCTGACAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR CCA 72 bp | CTGAAGGCTGCAGCCCCTGCAGCCCCAACCGCAAGCTaGATCCGGGATCTGCACATCAGCAGCCTTTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: LKAAAPAAPTAS*IRDLHISSLWS Trigger: GCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGCGGTTGGGGCTGCAGGGGCTGCAGCCTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR CAA 90 bp | GTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGCTGGACGCACATCAGCAGCCTTaGGAGCCCGGCAGAGACGGT | + |
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Preference number: 3 (lower is better) Translates to: VQGRGMHVRRSVSSWKLDAHQQP*EPGRDG Trigger: ACCGTCTCTGCCGGGCTCCAAAGGCTGCTGATGTGC...GTCCAGCTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR CCA 72 bp | GCAAGCTGGATCCGGGATCTGCACATCAGCAGCCTTTaGAGCCCGGCAGAGACGGTCCTGCTGCAGGCGATT | + |
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Preference number: 3 (lower is better) Translates to: ASWIRDLHISSL*SPAETVLLQAI Trigger: AATCGCCTGCAGCAGGACCGTCTCTGCCGGGCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR CAA 90 bp | GCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACGGAACCCGGGAGCCTTaGTGGATGGTAAAGGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: AAFLIAGHRASSQTQQSDGTREP*WMVKAC Trigger: GCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCC...GTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR CAA 90 bp | GGGCGCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCGCTTGCAGTGCAAGTTaGAAGTTCTATGATTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GRSIPHSRAQGFLSDTAVACSAS*KFYDCW Trigger: CCAGCAATCATAGAACTTCAAACTTGCACTGCAAGC...GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR-3UTR CAA 90 bp | AGGAACATTTCGGTCACGGCAAAGAAAGATTATGTGCTTCTCTGTGTTACAGACGGAACCCGGGAGCCTTaGTGGATGGTAAAGGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: RNISVTAKKDYVLLCVTDGTREP*WMVKAC Trigger: GCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCC...GTCTGTAACACAGAGAAGCACATAATCTTTCTTTGCCGTGACCGAAATGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR GCA 72 bp | GTGCGTGGATATCCGCGTGGGGAATATCTACGGGCTTaGAGTGCAAGTTTGAAGTTCTATGATTGCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VRGYPRGEYLRA*SASLKFYDCWK Trigger: CTTCCAGCAATCATAGAACTTCAAACTTGCACTGCAAGCCCGTAGATATTCCCCACGCGGATATCCACGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR TCA 90 bp | GGTGGGAACCCGGGAGCCTTTGTGGATGGTAAAGGCCTGCAGGGGCTGCAGGGCGTGCTGCTGTTTCTCTaGAGGACTTGCGGCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGNPGAFVDGKGLQGLQGVLLFL*RTCGVG Trigger: CCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCAC...GCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR CAA 72 bp | CAGGGAAATGGGGGATGGGTGGGAACCCGGGAGCCTTaGTGGATGGTAAAGGCCTGCAGGGGCTGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QGNGGWVGTREP*WMVKACRGCRA Trigger: TGCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCACCCATCCCCCATTTCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| 3UTR CAA 72 bp | CGCAAGCTGGATCCGGGATCTGCACATCAGCAGCCTTaGGAGCCCGGCAGAGACGGTCCTGCTGCAGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: RKLDPGSAHQQP*EPGRDGPAAGD Trigger: ATCGCCTGCAGCAGGACCGTCTCTGCCGGGCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR GCA 90 bp | GGTGGGAACCCGGGAGCCTTTGTGGATGGTAAAGGCCTGCAGGGGCTGCAGGGCTGTTCTGGCACATCCTaGATACCTCTCCCCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GGNPGAFVDGKGLQGLQGCSGTS*IPLPGP Trigger: GGGACCGGGGAGAGGTATGCAGGATGTGCCAGAACA...GCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR GCA 90 bp | GGTGGGAACCCGGGAGCCTTTGTGGATGGTAAAGGCCTGCAGGGGCTGCAGGGCTGTACCCATGGATGCTaGAGAACCTGGGCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: GGNPGAFVDGKGLQGLQGCTHGC*RTWAAL Trigger: CAGTGCTGCCCAGGTTCTGCAGCATCCATGGGTACA...GCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR TCA 90 bp | GGGCGCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTCATTCTCCTCATGCTaGGACAGCTGGCGGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GRSIPHSRAQGFLSDTAVSFSSC*DSWRFR Trigger: CCTGAACCGCCAGCTGTCTCAGCATGAGGAGAATGA...GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR GCA 90 bp | GTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGCTGGACCTCCACCACCTCAGGTaGCATATACTCTGCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: VQGRGMHVRRSVSSWKLDLHHLR*HILCRA Trigger: GGCTCTGCAGAGTATATGGCACCTGAGGTGGTGGAG...GTCCAGCTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR GCA 90 bp | GGGCGCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCCCTTGTACCCATGGATaGTGCAGAACCTGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GRSIPHSRAQGFLSDTAVPCTHG*CRTWAA Trigger: TGCTGCCCAGGTTCTGCAGCATCCATGGGTACAAGG...GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR CCA 90 bp | CTACTTCACACTTTGACCTTACAGGTTTTCAGGGGGCACCGCTGGGACAGGCCTGGAAGTCAAGGGCAGTaGCGACGTCCCGCACCACTC | + |
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Preference number: 4 (lower is better) Translates to: LLHTLTLQVFRGHRWDRPGSQGQ*RRPAPL Trigger: GAGTGGTGCGGGACGTCGCCACTGCCCTTGACTTCC...AGGCCTGTCCCAGCGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR CCA 90 bp | CCGCAAGCTGGATCCGGGATCTGCACATCAGCAGCCTTTGGAGCCCGGCAGAGAGCTCTGGCGTGGTTATaGGAGTGCAGGAGTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PQAGSGICTSAAFGARQRALAWL*ECRSCS Trigger: TGAACAACTCCTGCACTCCCATAACCACGCCAGAGC...TCTCTGCCGGGCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR TCA 90 bp | GGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGAGGCAGCAGGCCTCGTTGGAGATGTaGGCCCAGTCTTTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GLPLRHSSLTTLGLWRQQASLEM*AQSLSG Trigger: TCCTGACAAAGACTGGGCTCACATCTCCAACGAGGC...CTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR TCA 90 bp | GGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGAGGCAGCAGTCATTCTCCTCATGCTaGGACAGCTGGCGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPLRHSSLTTLGLWRQQSFSSC*DSWRFR Trigger: CCTGAACCGCCAGCTGTCTCAGCATGAGGAGAATGA...CTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GGTGGGAACCCGGGAGCCTTTGTGGATGGTAAAGGCCTGCAGGGGCTGCAGGGCGCGTGGTTATGGGAGTaGAGGAGTTGTTCAACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GGNPGAFVDGKGLQGLQGAWLWE*RSCSTL Trigger: TAAAGTTGAACAACTCCTGCACTCCCATAACCACGC...GCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGTGTACCCATGGATGCTaGAGAACCTGGGCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKCTHGC*RTWAAL Trigger: CAGTGCTGCCCAGGTTCTGCAGCATCCATGGGTACA...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GGTGGGAACCCGGGAGCCTTTGTGGATGGTAAAGGCCTGCAGGGGCTGCAGGGCTCAAGTCCATGGTGCTaGTGTTTCTCTGAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GGNPGAFVDGKGLQGLQGSSPWC*CFSEGL Trigger: AAGTCCTTCAGAGAAACAGCAGCACCATGGACTTGA...GCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGAGGCAGCAGTGTCAGAATCCACGATaGGAAGGGGCTCACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLPLRHSSLTTLGLWRQQCQNPR*EGAHCC Trigger: GCAGCAGTGAGCCCCTTCCCATCGTGGATTCTGACA...CTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGTGTCAGAATCCACGATaGGAAGGGGCTCACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKCQNPR*EGAHCC Trigger: GCAGCAGTGAGCCCCTTCCCATCGTGGATTCTGACA...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GGGCGCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCATCTTCAAACTTTCCTaGCAGAGAGTCGGTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRSIPHSRAQGFLSDTAVIFKLS*QRVGGP Trigger: CGGGCCACCGACTCTCTGCCAGGAAAGTTTGAAGAT...GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GGGCGCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCCAGGCGAGATTTGGATaGAGGGGACAGCTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRSIPHSRAQGFLSDTAVQARFG*RGQLHG Trigger: TCCATGAAGCTGTCCCCTCCATCCAAATCTCGCCTG...GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR TCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGTGGCTTCTCGCTCATTaGAGTGCTTCCGCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWWLLAH*SASASG Trigger: TCCAGAAGCGGAAGCACTTCAATGAGCGAGAAGCCA...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACGCCTCGTTGGAGATGTaGGCCCAGTCTTTGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AAFLIAGHRASSQTQQSDASLEM*AQSLSG Trigger: TCCTGACAAAGACTGGGCTCACATCTCCAACGAGGC...GTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACGAACCTGGGCAGCACTaGGTCTTTGCTTCGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAFLIAGHRASSQTQQSDEPGQH*VFASHL Trigger: GAGATGCGAAGCAAAGACTCAGTGCTGCCCAGGTTC...GTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGCTGGACCGACTGTGCCCGGCTTaGTTCTCGATGATTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VQGRGMHVRRSVSSWKLDRLCPA*FSMILT Trigger: TGTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCG...GTCCAGCTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | CACTTTGACCTTACAGGTTTTCAGGGGGCACCGCTGGGACAGGCCTACAAGGAGCTCCACCACCTCAGGTaGCATATACTCTGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFDLTGFQGAPLGQAYKELHHLR*HILCRA Trigger: GGCTCTGCAGAGTATATGGCACCTGAGGTGGTGGAG...CTCCTTGTAGGCCTGTCCCAGCGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGTGTTCTGGCACATCCTaGATACCTCTCCCCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGQVPLPTSHFDLTGFQGCSGTS*IPLPGP Trigger: GGGACCGGGGAGAGGTATGCAGGATGTGCCAGAACA...CCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTGCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGATCTTCAAACTTTCCTaGCAGAGAGTCGGTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWIFKLS*QRVGGP Trigger: CGGGCCACCGACTCTCTGCCAGGAAAGTTTGAAGAT...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | CACTTTGACCTTACAGGTTTTCAGGGGGCACCGCTGGGACAGGCCTACAAGGAGGAGCCAGGCGAGATTTaGATGGAGGGGACAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFDLTGFQGAPLGQAYKEEPGEI*MEGTAS Trigger: TGAAGCTGTCCCCTCCATCCAAATCTCGCCTGGCTC...CTCCTTGTAGGCCTGTCCCAGCGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTTTGAAGACTCCAGGGAAATGGGGGATGGGTGGGAACCCGGGAGCCTTTGGCTTCTCGCTCATTaGAGTGCTTCCGCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFEDSREMGDGWEPGSLWLLAH*SASASG Trigger: TCCAGAAGCGGAAGCACTTCAATGAGCGAGAAGCCA...AAGGCTCCCGGGTTCCCACCCATCCCCCATTTCCCTGGAGTCTTCAAAGGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGCCCCTTTCTGGAGCTTaGCCTTGTACCCATGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AGQVPLPTSHFDLTGFQGPLSGA*PCTHGC Trigger: GCATCCATGGGTACAAGGGCAAGCTCCAGAAAGGGG...CCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | CTACTTCACACTTTGACCTTACAGGTTTTCAGGGGGCACCGCTGGGACAGGCCTCCCCTTTCTGGAGCTTaGCCTTGTACCCATGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHTLTLQVFRGHRWDRPPLSGA*PCTHGC Trigger: GCATCCATGGGTACAAGGGCAAGCTCCAGAAAGGGG...AGGCCTGTCCCAGCGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GGGCGCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCGAGTCAAGTCCATGGTaGTGCTGTTTCTCTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRSIPHSRAQGFLSDTAVESSPW*CCFSEG Trigger: TCCTTCAGAGAAACAGCAGCACCATGGACTTGACTC...GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | CTACTTCACACTTTGACCTTACAGGTTTTCAGGGGGCACCGCTGGGACAGGCCTGAGCCAGGCGAGATTTaGATGGAGGGGACAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHTLTLQVFRGHRWDRPEPGEI*MEGTAS Trigger: TGAAGCTGTCCCCTCCATCCAAATCTCGCCTGGCTC...AGGCCTGTCCCAGCGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTTGAAGACTCCAGGGAAATGGGGGATGGGTGGGAACCCGGGAGCCTTCGACTGTGCCCGGCTTaGTTCTCGATGATTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSFEDSREMGDGWEPGSLRLCPA*FSMILT Trigger: TGTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCG...AAGGCTCCCGGGTTCCCACCCATCCCCCATTTCCCTGGAGTCTTCAAAGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGTCTCGCTCATTGAAGTaGTTCCGCTTCTGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKSRSLK*FRFWMC Trigger: ACACATCCAGAAGCGGAAGCACTTCAATGAGCGAGA...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGCTGGACGCGTGGTTATGGGAGTaGAGGAGTTGTTCAACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VQGRGMHVRRSVSSWKLDAWLWE*RSCSTL Trigger: TAAAGTTGAACAACTCCTGCACTCCCATAACCACGC...GTCCAGCTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGCTGGACTCAAGTCCATGGTGCTaGTGTTTCTCTGAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRGMHVRRSVSSWKLDSSPWC*CFSEGL Trigger: AAGTCCTTCAGAGAAACAGCAGCACCATGGACTTGA...GTCCAGCTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | CCGCAAGCTGGATCCGGGATCTGCACATCAGCAGCCTTTGGAGCCCGGCAGAGACGGAGACACCTTTTCTaGAGATTCACACAGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQAGSGICTSAAFGARQRRRHLF*RFTQYV Trigger: AACATACTGTGTGAATCTCCAGAAAAGGTGTCTCCG...TCTCTGCCGGGCTCCAAAGGCTGCTGATGTGCAGATCCCGGATCCAGCTTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGGCTCTGGCGTGGTTATaGGAGTGCAGGAGTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGQVPLPTSHFDLTGFQGALAWL*ECRSCS Trigger: TGAACAACTCCTGCACTCCCATAACCACGCCAGAGC...CCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTGCCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGTGGAGTAGTCAGCTCTaGCGTGGTTATGGGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGQVPLPTSHFDLTGFQGWSSQL*RGYGSA Trigger: TGCACTCCCATAACCACGCCAGAGCTGACTACTCCA...CCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTGCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | CTACTTCACACTTTGACCTTACAGGTTTTCAGGGGGCACCGCTGGGACAGGCCTTGGAGTAGTCAGCTCTaGCGTGGTTATGGGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHTLTLQVFRGHRWDRPWSSQL*RGYGSA Trigger: TGCACTCCCATAACCACGCCAGAGCTGACTACTCCA...AGGCCTGTCCCAGCGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GGGCGCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCAGAGAGTCAAGTCCATaGTGCTGCTGTTTCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRSIPHSRAQGFLSDTAVRESSP*CCCFSE Trigger: TTCAGAGAAACAGCAGCACCATGGACTTGACTCTCT...GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | CTACTTCACACTTTGACCTTACAGGTTTTCAGGGGGCACCGCTGGGACAGGCCTCAGGCGAGATTTGGATaGAGGGGACAGCTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHTLTLQVFRGHRWDRPQARFG*RGQLHG Trigger: TCCATGAAGCTGTCCCCTCCATCCAAATCTCGCCTG...AGGCCTGTCCCAGCGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTTGAAGACTCCAGGGAAATGGGGGATGGGTGGGAACCCGGGAGCCTTGAGTCAAGTCCATGGTaGTGCTGTTTCTCTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFEDSREMGDGWEPGSLESSPW*CCFSEG Trigger: TCCTTCAGAGAAACAGCAGCACCATGGACTTGACTC...AAGGCTCCCGGGTTCCCACCCATCCCCCATTTCCCTGGAGTCTTCAAAGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGAGGCAGCAGTCAAACAGCTTGTTCTaGCACATCCTGCATACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPLRHSSLTTLGLWRQQSNSLF*HILHTS Trigger: AGAGGTATGCAGGATGTGCCAGAACAAGCTGTTTGA...CTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGAGAGAGTCAAGTCCATaGTGCTGCTGTTTCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWRESSP*CCCFSE Trigger: TTCAGAGAAACAGCAGCACCATGGACTTGACTCTCT...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGTCTCGCTCATTGAAGTaGTTCCGCTTCTGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGQVPLPTSHFDLTGFQGSRSLK*FRFWMC Trigger: ACACATCCAGAAGCGGAAGCACTTCAATGAGCGAGA...CCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTGCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | CAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGTCAACTTTACCCCACTaGCCAAGTCAAAGTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGTGLPLRHSSLTTLGLWSTLPH*PSQSHK Trigger: TTTGTGACTTTGACTTGGGCAGTGGGGTAAAGTTGA...CCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTTGAAGACTCCAGGGAAATGGGGGATGGGTGGGAACCCGGGAGCCTTCGGAGACACCTTTTCTaGAGATTCACACAGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFEDSREMGDGWEPGSLRRHLF*RFTQYV Trigger: AACATACTGTGTGAATCTCCAGAAAAGGTGTCTCCG...AAGGCTCCCGGGTTCCCACCCATCCCCCATTTCCCTGGAGTCTTCAAAGGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGTCAAACAGCTTGTTCTaGCACATCCTGCATACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQVPLPTSHFDLTGFQGSNSLF*HILHTS Trigger: AGAGGTATGCAGGATGTGCCAGAACAAGCTGTTTGA...CCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTGCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR GCA 90 bp | AGGAACATTTCGGTCACGGCAAAGAAAGATTATGTGCTTCTCTGTGTTACAGACCCTTGTACCCATGGATaGTGCAGAACCTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNISVTAKKDYVLLCVTDPCTHG*CRTWAA Trigger: TGCTGCCCAGGTTCTGCAGCATCCATGGGTACAAGG...GTCTGTAACACAGAGAAGCACATAATCTTTCTTTGCCGTGACCGAAATGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR TCA 90 bp | TTGTGGTTGACTAATGTTGTATGTCATATATGCAAATCTGTTTTACGTGACTCCGTGCTGCTGTTTCTCTaGAGGACTTGCGGCGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLTNVVCHICKSVLRDSVLLFL*RTCGVG Trigger: CCCCACGCCGCAAGTCCTTCAGAGAAACAGCAGCAC...GGAGTCACGTAAAACAGATTTGCATATATGACATACAACATTAGTCAACCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGGAACCCGGGAGCCTTTGTGGATGGTAAAGGCCTGCAGGGGCTGCAGGGCCTGGCTTCTCGCTCATaGAAGTGCTTCCGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGNPGAFVDGKGLQGLQGLASRS*KCFRFW Trigger: CCAGAAGCGGAAGCACTTCAATGAGCGAGAAGCCAG...GCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CAA 90 bp | GGGCGCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCGGCAGCACTGAGTCTTaGCTTCGCATCTCGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRSIPHSRAQGFLSDTAVGSTES*LRISNQ Trigger: CTGGTTCGAGATGCGAAGCAAAGACTCAGTGCTGCC...GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGGAACCCGGGAGCCTTTGTGGATGGTAAAGGCCTGCAGGGGCTGCAGGGCAATGTTCCTGTTCCCTaGACACTGATACAGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGNPGAFVDGKGLQGLQGNVPVP*TLIQCL Trigger: GAGACACTGTATCAGTGTCAAGGGAACAGGAACATT...GCCCTGCAGCCCCTGCAGGCCTTTACCATCCACAAAGGCTCCCGGGTTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR CAA 90 bp | GTGACAGTGCAGGGAAGAGGCATGCACGTCCGCAGATCTGTCAGCTCCTGGAAGGGCAGCACTGAGTCTTaGCTTCGCATCTCGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: VTVQGRGMHVRRSVSSWKGSTES*LRISNQ Trigger: CTGGTTCGAGATGCGAAGCAAAGACTCAGTGCTGCC...CTTCCAGGAGCTGACAGATCTGCGGACGTGCATGCCTCTTCCCTGCACTGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR CAA 90 bp | GCAGCATTCCTCATAGCAGGGCACAGGGCTTCCTCTCAGACACAGCAGTCTGACTCGACTGTGCCCGGCTaGCTTCTCGATGATTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: AAFLIAGHRASSQTQQSDSTVPG*LLDDFD Trigger: GTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCGA...GTCAGACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR CAA 90 bp | CAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGGCACCGTCCCCTTTCTGGAGCTaGCCCTTGTACCCATGGATG | + |
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Preference number: 5 (lower is better) Translates to: QVPLPTSHFDLTGFQGAPSPFWS*PLYPWM Trigger: CATCCATGGGTACAAGGGCAAGCTCCAGAAAGGGGA...CGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS CCA 90 bp | TCCCAGCAATTCCGAGGTCAGCTGGTACACATCTTCAAACTTTCCTaGCAGAGAGTCGGTGGCCCGGGTCTTACGCTTCTTCTTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SQQFRGQLVHIFKLS*QRVGGPGLTLLLPP Trigger: AGGAGGAAGAAGAAGCGTAAGACCCGGGCCACCGACTCTCTGCCAGGAAAGTTTGAAGATGTGTACCAGCTGACCTCGGAATTGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS-3UTR CAA 90 bp | GCAGGGCAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGTCGACTGTGCCCGGCTaGCTTCTCGATGATTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: AGQVPLPTSHFDLTGFQGSTVPG*LLDDFD Trigger: GTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCGA...CCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTGCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR CAA 90 bp | GGGCTTCCTCTCAGACACAGCAGTCTGACTACCCTGGGTTTGTGGAGGCAGCAGATGCTCTCAAACAGCTaGTTCTGGCACATCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: GLPLRHSSLTTLGLWRQQMLSNS*FWHILH Trigger: ATGCAGGATGTGCCAGAACAAGCTGTTTGAGAGCAT...CTGCTGCCTCCACAAACCCAGGGTAGTCAGACTGCTGTGTCTGAGAGGAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS GCA 90 bp | AGTGTCTCCACCTCACGGAACACTCGACTTCGACTGTGCCCGGCTTaGTTCTCGATGATTTTGACAGCATACTCCTTCCCACTCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: SVSTSRNTRLRLCPA*FSMILTAYSFPLCR Trigger: CCTACAGAGTGGGAAGGAGTATGCTGTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCGAAGTCGAGTGTTCCGTGAGGTGGAGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS CCA 90 bp | CTCAGGTGCCATATACTCTGCAGAGCCGCATGGAGTAGTCAGCTCTaGCGTGGTTATGGGAGTGCAGGAGTTGTTCAACTTTACCCCACT | + |
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Preference number: 5 (lower is better) Translates to: LRCHILCRAAWSSQL*RGYGSAGVVQLYPT Trigger: AGTGGGGTAAAGTTGAACAACTCCTGCACTCCCATAACCACGCCAGAGCTGACTACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS CCA 90 bp | AGGTCAGCTGGTACACATCTTCAAACTTTCCTGGCAGAGAGTCGGTaGCCCGGGTCTTACGCTTCTTCTTCCTCCTCTTGTCAGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: RSAGTHLQTFLAESR*PGSYASSSSSCQNP Trigger: TGGATTCTGACAAGAGGAGGAAGAAGAAGCGTAAGACCCGGGCCACCGACTCTCTGCCAGGAAAGTTTGAAGATGTGTACCAGCTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS-3UTR CAA 90 bp | CACTTTGACCTTACAGGTTTTCAGGGGGCACCGCTGGGACAGGCCTACAAGGAGAATGTTCCTGTTCCCTaGACACTGATACAGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: HFDLTGFQGAPLGQAYKENVPVP*TLIQCL Trigger: GAGACACTGTATCAGTGTCAAGGGAACAGGAACATT...CTCCTTGTAGGCCTGTCCCAGCGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR CAA 90 bp | CAGGTCCCTCTGCCTACTTCACACTTTGACCTTACAGGTTTTCAGGGGGCACCGATGCTCTCAAACAGCTaGTTCTGGCACATCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: QVPLPTSHFDLTGFQGAPMLSNS*FWHILH Trigger: ATGCAGGATGTGCCAGAACAAGCTGTTTGAGAGCAT...CGGTGCCCCCTGAAAACCTGTAAGGTCAAAGTGTGAAGTAGGCAGAGGGACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS CCA 90 bp | TTTCACCGGAGACACCTTTTCTGGAGATTCACACAGTATGTTTTCTaGCTTCAGATCACGGTGAGCAATGCCTTTAGTGTGCAGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: FHRRHLFWRFTQYVF*LQITVSNAFSVQEV Trigger: GACTTCCTGCACACTAAAGGCATTGCTCACCGTGATCTGAAGCCAGAAAACATACTGTGTGAATCTCCAGAAAAGGTGTCTCCGGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS-3UTR CAA 90 bp | TTGTGGTTGACTAATGTTGTATGTCATATATGCAAATCTGTTTTACGTGACTCCTCCCCTTTCTGGAGCTaGCCCTTGTACCCATGGATG | + |
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Preference number: 5 (lower is better) Translates to: LWLTNVVCHICKSVLRDSSPFWS*PLYPWM Trigger: CATCCATGGGTACAAGGGCAAGCTCCAGAAAGGGGA...GGAGTCACGTAAAACAGATTTGCATATATGACATACAACATTAGTCAACCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS TCA 72 bp | CGACGTCCCGCACCACTCTACTGGCTTCTCGCTCATTaGAGTGCTTCCGCTTCTGGATGTGTGCTAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RRPAPLYWLLAH*SASASGCVLGW Trigger: CCATCCTAGCACACATCCAGAAGCGGAAGCACTTCAATGAGCGAGAAGCCAGTAGAGTGGTGCGGGACGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS CAA 72 bp | GCGACGTCCCGCACCACTCTACTGGCTTCTCGCTCATaGAAGTGCTTCCGCTTCTGGATGTGTGCTAGGATG | + |
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Preference number: 6 (lower is better) Translates to: ATSRTTLLASRS*KCFRFWMCARM Trigger: CATCCTAGCACACATCCAGAAGCGGAAGCACTTCAATGAGCGAGAAGCCAGTAGAGTGGTGCGGGACGTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS GCA 72 bp | AGTAGCCTCGTCCCTAAAGACCTCCACCACCTCAGGTaGCATATACTCTGCAGAGCCGCATGGAGTAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSLVPKDLHHLR*HILCRAAWSSQ Trigger: CTGACTACTCCATGCGGCTCTGCAGAGTATATGGCACCTGAGGTGGTGGAGGTCTTTAGGGACGAGGCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS GCA 72 bp | AGTCCCCTTTCTGGAGCTTGCCCTTGTACCCATGGATaGTGCAGAACCTGGGCAGCACTGAGTCTTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPLSGACPCTHG*CRTWAALSLCF Trigger: GAAGCAAAGACTCAGTGCTGCCCAGGTTCTGCAGCATCCATGGGTACAAGGGCAAGCTCCAGAAAGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS CAA 90 bp | CGGAACACTCGACTTCGACTGTGCCCGGCTTGCTTCTCGATGATTTaGACAGCATACTCCTTCCCACTCTGTAGGTTCACAGCACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RNTRLRLCPACFSMI*TAYSFPLCRFTAPW Trigger: CCAGGGTGCTGTGAACCTACAGAGTGGGAAGGAGTATGCTGTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCGAAGTCGAGTGTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS CCA 72 bp | TTCCGAGGTCAGCTGGTACACATCTTCAAACTTTCCTaGCAGAGAGTCGGTGGCCCGGGTCTTACGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FRGQLVHIFKLS*QRVGGPGLTLL Trigger: AAGAAGCGTAAGACCCGGGCCACCGACTCTCTGCCAGGAAAGTTTGAAGATGTGTACCAGCTGACCTCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS CAA 72 bp | CACCTCACGGAACACTCGACTTCGACTGTGCCCGGCTaGCTTCTCGATGATTTTGACAGCATACTCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: HLTEHSTSTVPG*LLDDFDSILLP Trigger: GGGAAGGAGTATGCTGTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCGAAGTCGAGTGTTCCGTGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS GCA 72 bp | ACCTCACGGAACACTCGACTTCGACTGTGCCCGGCTTaGTTCTCGATGATTTTGACAGCATACTCCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TSRNTRLRLCPA*FSMILTAYSFP Trigger: TGGGAAGGAGTATGCTGTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCGAAGTCGAGTGTTCCGTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS GCA 72 bp | AGTGTCTCCACCTCACGGAACACTCGACTTCGACTGTaGCCGGCTTGCTTCTCGATGATTTTGACAGCATAC | + |
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Preference number: 6 (lower is better) Translates to: SVSTSRNTRLRL*PACFSMILTAY Trigger: GTATGCTGTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCGAAGTCGAGTGTTCCGTGAGGTGGAGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS CCA 72 bp | GGTACACATCTTCAAACTTTCCTGGCAGAGAGTCGGTaGCCCGGGTCTTACGCTTCTTCTTCCTCCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: GTHLQTFLAESR*PGSYASSSSSC Trigger: ACAAGAGGAGGAAGAAGAAGCGTAAGACCCGGGCCACCGACTCTCTGCCAGGAAAGTTTGAAGATGTGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS CCA 72 bp | CATATACTCTGCAGAGCCGCATGGAGTAGTCAGCTCTaGCGTGGTTATGGGAGTGCAGGAGTTGTTCAACTT | + |
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Preference number: 6 (lower is better) Translates to: HILCRAAWSSQL*RGYGSAGVVQL Trigger: AAGTTGAACAACTCCTGCACTCCCATAACCACGCCAGAGCTGACTACTCCATGCGGCTCTGCAGAGTATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS CAA 72 bp | CGACTTCGACTGTGCCCGGCTTGCTTCTCGATGATTTaGACAGCATACTCCTTCCCACTCTGTAGGTTCACA | + |
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Preference number: 6 (lower is better) Translates to: RLRLCPACFSMI*TAYSFPLCRFT Trigger: TGTGAACCTACAGAGTGGGAAGGAGTATGCTGTCAAAATCATCGAGAAGCAAGCCGGGCACAGTCGAAGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 ENSMUST00000130819.8 ENSMUST00000144427.8 ENSMUST00000151203.8 |
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| CDS CAA 90 bp | CCGCATGGAGTAGTCAGCTCTGGCGTGGTTATGGGAGTGCAGGAGTaGTTCAACTTTACCCCACTGCCCAAGTCAAAGTCACAAATTTTC | + |
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Preference number: 6 (lower is better) Translates to: PHGVVSSGVVMGVQE*FNFTPLPKSKSQIF Trigger: GAAAATTTGTGACTTTGACTTGGGCAGTGGGGTAAAGTTGAACAACTCCTGCACTCCCATAACCACGCCAGAGCTGACTACTCCATGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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| CDS GCA 72 bp | TTATGGGAGTGCAGGAGTTGTTCAACTTTACCCCACTaGCCAAGTCAAAGTCACAAATTTTCACCGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: LWECRSCSTLPH*PSQSHKFSPET Trigger: TGTCTCCGGTGAAAATTTGTGACTTTGACTTGGGCAGTGGGGTAAAGTTGAACAACTCCTGCACTCCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019677.12 ENSMUST00000106513.10 |
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