Pregenerated sensors for MKKS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027274Ensembl transcript IDs: ENSMUST00000028730.13, ENSMUST00000110089.9
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTaGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TMVMSCQWKGTGHPF*EQLGEAASRQFPFS Trigger: GGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAATGGGAGAGAACAGTATaGTCTCTTAGACACCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKWERTV*SLRHLN Trigger: GTTGAGGTGTCTAAGAGAGCATACTGTTCTCTCCCA...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTTGGAGAACAGGCCTTTaGGAGAGAACAGTATGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TLSWNNLEKQHQGNFHFPWRTGL*ERTVCS Trigger: AGAGCATACTGTTCTCTCCCAAAGGCCTGTTCTCCA...AGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTAGTAATGTCCTGCCAGTaGAAAGGTACAGGGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: KSSNVSSRKDQALQKASVVMSCQ*KGTGHP Trigger: AGGGTGCCCTGTACCTTTCCACTGGCAGGACATTAC...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR-3UTR GCA 90 bp | CTAACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAAACACCTCAACTAGTTTaGTTCAGAACATATATATGC | + |
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Preference number: 2 (lower is better) Translates to: LTMVMSCQWKGTGHPFLETPQLV*FRTYIC Trigger: GCATATATATGTTCTGAAGCAAACTAGTTGAGGTGT...TTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATTATTTTGGGAGAGAACAGTATaGTCTCTTAGACACCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: TWRSSIKAISIFLGDLLFWERTV*SLRHLN Trigger: GTTGAGGTGTCTAAGAGAGCATACTGTTCTCTCCCA...AAATAATAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR CCA 72 bp | GTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTTaGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: VERYRAPFLGTT*RSSIKAISIFL Trigger: TAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTAACAGGGCACCCTTTCTaGGAACAACTTGGAGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: KSSNVSSRKDQALQKASVTGHPF*EQLGEA Trigger: TGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGT...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR CCA 72 bp | ATACAAGTATACTTTTACAGGTCATCTGTTCACCTATaGAGAACAGGCCTTTGGGAGAGAACAGTATGCTCT | + |
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Preference number: 3 (lower is better) Translates to: IQVYFYRSSVHL*RTGLWERTVCS Trigger: AGAGCATACTGTTCTCTCCCAAAGGCCTGTTCTCCATAGGTGAACAGATGACCTGTAAAAGTATACTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | CCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCCACTCAGCTTGGCAGTaGAGCAGTCCACAGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PVERYRAPFLGTTWRSSIHSAWQ*SSPQSG Trigger: ACCTGACTGTGGACTGCTTCACTGCCAAGCTGAGTG...GATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | AATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTCACTCAGCTTGGCAGTaGAGCAGTCCACAGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: NGNVLPVERYRAPFLGTTHSAWQ*SSPQSG Trigger: ACCTGACTGTGGACTGCTTCACTGCCAAGCTGAGTG...AGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | CTAACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAATTGCTGTTTGACATGTaGGCTTCAGCTCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LTMVMSCQWKGTGHPFLELLFDM*ASAPPR Trigger: CCTGGGAGGAGCTGAAGCTCACATGTCAAACAGCAA...TTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | CCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCGATGAACCTTGTGTCTaGCATATGCAGCCAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: PVERYRAPFLGTTWRSSIDEPCV*HMQPSV Trigger: CACACTTGGCTGCATATGTCAGACACAAGGTTCATC...GATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTAGCCCAAAGCTGCCTGTaGAAGGCAGGTTTGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GTTWRSSIKAISIFLGDLAQSCL*KAGLWC Trigger: GCACCACAAACCTGCCTTCCACAGGCAGCTTTGGGC...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR GCA 90 bp | CTAACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACGGTGTCATTTCTGCTaGAGAGAAGCAAGGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LTMVMSCQWKGTGHPFLERCHFC*REARCR Trigger: TCTGCACCTTGCTTCTCTGCAGCAGAAATGACACCG...TTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR GCA 90 bp | AATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTCGGTGTCATTTCTGCTaGAGAGAAGCAAGGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: NGNVLPVERYRAPFLGTTRCHFC*REARCR Trigger: TCTGCACCTTGCTTCTCTGCAGCAGAAATGACACCG...AGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | CTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGGCCCAAAGCTGCCTGTaGAAGGCAGGTTTGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LSWNNLEKQHQGNFHFPRAQSCL*KAGLWC Trigger: GCACCACAAACCTGCCTTCCACAGGCAGCTTTGGGC...CCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR CAA 72 bp | ATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTaGGAACAACTTGGAGAAGCAGCATCAAGGCAATTT | + |
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Preference number: 4 (lower is better) Translates to: MSCQWKGTGHPF*EQLGEAASRQF Trigger: AAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | CCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCCATAGCATGAGGCTATaGCTCCTTTCAAGACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: PVERYRAPFLGTTWRSSIHSMRL*LLSRQK Trigger: TTTCTGTCTTGAAAGGAGTCATAGCCTCATGCTATG...GATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAATTGCTGTTTGACATGTaGGCTTCAGCTCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKLLFDM*ASAPPR Trigger: CCTGGGAGGAGCTGAAGCTCACATGTCAAACAGCAA...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | ACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTCCACAGTCAGGTTACTaGCTGAGCCCAAAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TLSWNNLEKQHQGNFHFPPQSGY*LSPKLP Trigger: AGGCAGCTTTGGGCTCAGCCAGTAACCTGACTGTGG...AGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | GGAGAACAGGCCTTTGGGAGAGAACAGTATGCTCTCTTAGACACCTCAACTAGTACTTCTGAAGTCAACTaGGATTCGACAACTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GEQAFGREQYALLDTSTSTSEVN*DSTTTG Trigger: GCCTGTAGTTGTCGAATCCCAGTTGACTTCAGAAGT...ACTAGTTGAGGTGTCTAAGAGAGCATACTGTTCTCTCCCAAAGGCCTGTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | GGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCAGCTGAGCTCTTCCTaGCTGTTGTACAAACCACAG | + |
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Preference number: 4 (lower is better) Translates to: GTLSWNNLEKQHQGNFHFQLSSS*LLYKPQ Trigger: CTGTGGTTTGTACAACAGCCAGGAAGAGCTCAGCTG...AAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAACAGCTGAGCTCTTCCTaGCTGTTGTACAAACCACAG | + |
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Preference number: 4 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKQLSSS*LLYKPQ Trigger: CTGTGGTTTGTACAACAGCCAGGAAGAGCTCAGCTG...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR GCA 90 bp | GGAGAACAGGCCTTTGGGAGAGAACAGTATGCTCTCTTAGACACCTCAACTAGTTTGCTCCTGTCACTTTaGTTAGAGATTCCATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GEQAFGREQYALLDTSTSLLLSL*LEIPSE Trigger: CTCTGATGGAATCTCTAAGCAAAGTGACAGGAGCAA...ACTAGTTGAGGTGTCTAAGAGAGCATACTGTTCTCTCCCAAAGGCCTGTTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR GCA 90 bp | AATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTCTTGTGTCTGACATATaGAGCCAAGTGTGTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NGNVLPVERYRAPFLGTTLVSDI*SQVCFC Trigger: ACAGAAACACACTTGGCTGCATATGTCAGACACAAG...AGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR GCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAACAGAGCACTGCAAAATaGTTCAGCAGCAACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKQSTAK*FSSNMQ Trigger: CTGCATGTTGCTGCTGAAGCATTTTGCAGTGCTCTG...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR GCA 90 bp | GGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCAGAGCACTGCAAAATaGTTCAGCAGCAACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: GTLSWNNLEKQHQGNFHFQSTAK*FSSNMQ Trigger: CTGCATGTTGCTGCTGAAGCATTTTGCAGTGCTCTG...AAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | CCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCGAACTGTTTCAAAGATaGGTGGATTACTTTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PVERYRAPFLGTTWRSSIELFQR*VDYFLA Trigger: TGCCAAAAAGTAATCCACCCATCTTTGAAACAGTTC...GATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | CTAACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAATGGAAGGCAGGTTTGTaGTGCAAAAGGATGATAAGT | + |
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Preference number: 4 (lower is better) Translates to: LTMVMSCQWKGTGHPFLEWKAGL*CKRMIS Trigger: ACTTATCATCCTTTTGCACCACAAACCTGCCTTCCA...TTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATTATTTCCACAGTCAGGTTACTaGCTGAGCCCAAAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TWRSSIKAISIFLGDLLFPQSGY*LSPKLP Trigger: AGGCAGCTTTGGGCTCAGCCAGTAACCTGACTGTGG...AAATAATAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| 3UTR CAA 72 bp | AGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTaGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGKVQGTLSWNN*EKQHQGNFHFP Trigger: AGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATACTGTGTACCAAGCTaGGGAAGGTATGTGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: GTTWRSSIKAISIFLGDLYCVPS*GRYVYF Trigger: GAAGTACACATACCTTCCTCAGCTTGGTACACAGTA...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAAAAACCCACGGTTCCTTaGTTGTTAACTGCAAGACGT | + |
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Preference number: 4 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKKPTVP*LLTARR Trigger: ACGTCTTGCAGTTAACAATCAAGGAACCGTGGGTTT...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | ACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTGATGAACCTTGTGTCTaGCATATGCAGCCAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: TLSWNNLEKQHQGNFHFPDEPCV*HMQPSV Trigger: CACACTTGGCTGCATATGTCAGACACAAGGTTCATC...AGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR GCA 90 bp | GGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCTGCAAGACGTGCATTaGTGTTTGACATGTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GTLSWNNLEKQHQGNFHFLQDVH*CLTCEL Trigger: AAGCTCACATGTCAAACAGCAATGCACGTCTTGCAG...AAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAAACTTCTGAAGTCAACTaGGATTCGACAACTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKTSEVN*DSTTTG Trigger: GCCTGTAGTTGTCGAATCCCAGTTGACTTCAGAAGT...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAAGGGTGGATTACTTTTTaGCACAGGACAAGGTCTACA | + |
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Preference number: 4 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKGWITF*HRTRST Trigger: TGTAGACCTTGTCCTGTGCCAAAAAGTAATCCACCC...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTAGGGTGGATTACTTTTTaGCACAGGACAAGGTCTACA | + |
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Preference number: 4 (lower is better) Translates to: GTTWRSSIKAISIFLGDLGWITF*HRTRST Trigger: TGTAGACCTTGTCCTGTGCCAAAAAGTAATCCACCC...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CCA 90 bp | CTAACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAATGTTTCAAAGATGGGTaGATTACTTTTTGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LTMVMSCQWKGTGHPFLECFKDG*ITFWHR Trigger: CCTGTGCCAAAAAGTAATCCACCCATCTTTGAAACA...TTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | ACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTCAGAAAGTGTGGACCTaGCTTTCTCACTTGTCAATG | + |
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Preference number: 4 (lower is better) Translates to: TLSWNNLEKQHQGNFHFPQKVWT*LSHLSM Trigger: CATTGACAAGTGAGAAAGTCAGGTCCACACTTTCTG...AGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | CTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTACTGTGTACCAAGCTaGGGAAGGTATGTGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: LSWNNLEKQHQGNFHFPRYCVPS*GRYVYF Trigger: GAAGTACACATACCTTCCTCAGCTTGGTACACAGTA...CCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR TCA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTACATACTTCGTGTCAATaGGGATTTCACCACCATCAT | + |
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Preference number: 4 (lower is better) Translates to: GTTWRSSIKAISIFLGDLHTSCQ*GFHHHH Trigger: ATGATGGTGGTGAAATCCTCATTGACACGAAGTATG...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR GCA 90 bp | AATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTCCTAGATTAAGCAACTaGTCTAAAACTGCATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NGNVLPVERYRAPFLGTTPRLSN*SKTAFS Trigger: TGAGAATGCAGTTTTAGAGCAGTTGCTTAATCTAGG...AGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR GCA 90 bp | CTAACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACCTAGATTAAGCAACTaGTCTAAAACTGCATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTMVMSCQWKGTGHPFLEPRLSN*SKTAFS Trigger: TGAGAATGCAGTTTTAGAGCAGTTGCTTAATCTAGG...TTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR GCA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATTGCTCCTGTCACTTTaGTTAGAGATTCCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTTWRSSIKAISIFLGDLLLLSL*LEIPSE Trigger: CTCTGATGGAATCTCTAAGCAAAGTGACAGGAGCAA...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR GCA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTACTTGTGTCTGACATATaGAGCCAAGTGTGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTTWRSSIKAISIFLGDLLVSDI*SQVCFC Trigger: ACAGAAACACACTTGGCTGCATATGTCAGACACAAG...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAACAGGCCTTTGGGAGAGAACAGTATGCTCTCTTAGACACCTCAACTAGTGAATCTGTAACTCTTTaGCCCTTTAAGGGAACAATT | + |
|
Preference number: 4 (lower is better) Translates to: GEQAFGREQYALLDTSTSESVTL*PFKGTI Trigger: AATTGTTCCCTTAAAGGGCCAAAGAGTTACAGATTC...ACTAGTTGAGGTGTCTAAGAGAGCATACTGTTCTCTCCCAAAGGCCTGTTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CCA 90 bp | AATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTCACTTGCCTTTTGAGTaGGTAATAACCTCCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: NGNVLPVERYRAPFLGTTHLPFE*VITSLI Trigger: AATTAAGGAGGTTATTACCCACTCAAAAGGCAAGTG...AGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGCATAGCATGAGGCTATaGCTCCTTTCAAGACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSWNNLEKQHQGNFHFPRHSMRL*LLSRQK Trigger: TTTCTGTCTTGAAAGGAGTCATAGCCTCATGCTATG...CCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAAAAGGCAGGTTTGTGGTaGAAAAGGATGATAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKKAGLW*KRMIST Trigger: AGTACTTATCATCCTTTTGCACCACAAACCTGCCTT...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CCA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATGTTTCAAAGATGGGTaGATTACTTTTTGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTTWRSSIKAISIFLGDLCFKDG*ITFWHR Trigger: CCTGTGCCAAAAAGTAATCCACCCATCTTTGAAACA...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR TCA 90 bp | ACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATTATTTAGGTATGTGTACTTCTaGAGTCAACTGGGATTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TWRSSIKAISIFLGDLLFRYVYF*SQLGFD Trigger: GTCGAATCCCAGTTGACTTCAGAAGTACACATACCT...AAATAATAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGAAGGCAGGTTTGTGGTaGAAAAGGATGATAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LSWNNLEKQHQGNFHFPRKAGLW*KRMIST Trigger: AGTACTTATCATCCTTTTGCACCACAAACCTGCCTT...CCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAAGAATCTGTAACTCTTTaGCCCTTTAAGGGAACAATT | + |
|
Preference number: 4 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKESVTL*PFKGTI Trigger: AATTGTTCCCTTAAAGGGCCAAAGAGTTACAGATTC...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTACAGAAAGTGTGGACCTaGCTTTCTCACTTGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KSSNVSSRKDQALQKASVQKVWT*LSHLSM Trigger: CATTGACAAGTGAGAAAGTCAGGTCCACACTTTCTG...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR TCA 90 bp | GAACAGTATGCTCTCTTAGACACCTCAACTAGTTTGCTTCAGAACATATATATGAAACCCACGGTTCCTTaGTTGTTAACTGCAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: EQYALLDTSTSLLQNIYMKPTVP*LLTARR Trigger: ACGTCTTGCAGTTAACAATCAAGGAACCGTGGGTTT...CATATATATGTTCTGAAGCAAACTAGTTGAGGTGTCTAAGAGAGCATACTGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CCA 90 bp | ACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATTATTTTGGAAGGCAGGTTTGTaGTGCAAAAGGATGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TWRSSIKAISIFLGDLLFWKAGL*CKRMIS Trigger: ACTTATCATCCTTTTGCACCACAAACCTGCCTTCCA...AAATAATAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTACATACTTCGTGTCAATaGGGATTTCACCACCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSSNVSSRKDQALQKASVHTSCQ*GFHHHH Trigger: ATGATGGTGGTGAAATCCTCATTGACACGAAGTATG...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTATTTGGAGCCAAATCTTaGAGAGCACACATCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSSNVSSRKDQALQKASVFGAKS*RAHIFH Trigger: GTGAAAGATGTGTGCTCTGCAAGATTTGGCTCCAAA...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGTATGCTCTCTTAGACACCTCAACTAGTTTGCTTCAGAACATATATATGCACTTGCCTTTTGAGTaGGTAATAACCTCCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: EQYALLDTSTSLLQNIYMHLPFE*VITSLI Trigger: AATTAAGGAGGTTATTACCCACTCAAAAGGCAAGTG...CATATATATGTTCTGAAGCAAACTAGTTGAGGTGTCTAAGAGAGCATACTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTAGAACTGTTTCAAAGATaGGTGGATTACTTTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSSNVSSRKDQALQKASVELFQR*VDYFLA Trigger: TGCCAAAAAGTAATCCACCCATCTTTGAAACAGTTC...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTATTTCTCACTTGTCAATaGTTCAGTTTTACACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: KSSNVSSRKDQALQKASVFLTCQ*FSFTQR Trigger: TCGTTGTGTAAAACTGAACCATTGACAAGTGAGAAA...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS TCA 90 bp | GCCACTCAGCTTGGCAGTGAAGCAGTCCACAGTCAGGTTACTGGCTaGGCCCAAAGCTGCCTGTGGAAGGCAGGTTTGTGGTGCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATQLGSEAVHSQVTG*AQSCLWKAGLWCKR Trigger: CCTTTTGCACCACAAACCTGCCTTCCACAGGCAGCTTTGGGCTCAGCCAGTAACCTGACTGTGGACTGCTTCACTGCCAAGCTGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS TCA 90 bp | AATTGGCTGTCTCTACAGCCACCTGTAAGCCACTCAGCTTGGCAGTaGAGCAGTCCACAGTCAGGTTACTGGCTGAGCCCAAAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NWLSLQPPVSHSAWQ*SSPQSGYWLSPKLP Trigger: AGGCAGCTTTGGGCTCAGCCAGTAACCTGACTGTGGACTGCTTCACTGCCAAGCTGAGTGGCTTACAGGTGGCTGTAGAGACAGCCAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS GCA 90 bp | CACCACCATCATGTTCCAAAGAGCCAGCAACGGACTCCAGAGCACTaGAAAATGCTTCAGCAGCAACATGCAGCTTTGCCTGAGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: HHHHVPKSQQRTPEH*KMLQQQHAALPEYT Trigger: GGTGTACTCAGGCAAAGCTGCATGTTGCTGCTGAAGCATTTTGCAGTGCTCTGGAGTCCGTTGCTGGCTCTTTGGAACATGATGGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS GCA 90 bp | GGACTCCAGAGCACTGCAAAATGCTTCAGCAGCAACATGCAGCTTTaGCTGAGTACACCCATCATCTCTGACAATAGCTTCTGCCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLQSTAKCFSSNMQL*LSTPIISDNSFCLV Trigger: CACGAGGCAGAAGCTATTGTCAGAGATGATGGGTGTACTCAGGCAAAGCTGCATGTTGCTGCTGAAGCATTTTGCAGTGCTCTGGAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS TCA 90 bp | CGTGATTCTGCACGGATGACGTTAGGATCTTTAATACGGGATGGGTaGCTGAAAGGTTTCGAAGCAGGGCTGAGGACTGTGAGGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RDSARMTLGSLIRDG*LKGFEAGLRTVRLC Trigger: ACACAACCTCACAGTCCTCAGCCCTGCTTCGAAACCTTTCAGTCACCCATCCCGTATTAAAGATCCTAACGTCATCCGTGCAGAATCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS TCA 90 bp | CACAGAATGGCTGTGAATAAGCCGCAGTCACTGAAGCAGGACACGTaGTTCTGCACGGATGACGTTAGGATCTTTAATACGGGATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRMAVNKPQSLKQDT*FCTDDVRIFNTGWV Trigger: CACCCATCCCGTATTAAAGATCCTAACGTCATCCGTGCAGAATCACGTGTCCTGCTTCAGTGACTGCGGCTTATTCACAGCCATTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS GCA 90 bp | ATCATGTTCCAAAGAGCCAGCAACGGACTCCAGAGCACTGCAAAATaGTTCAGCAGCAACATGCAGCTTTGCCTGAGTACACCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: IMFQRASNGLQSTAK*FSSNMQLCLSTPII Trigger: GATGATGGGTGTACTCAGGCAAAGCTGCATGTTGCTGCTGAAGCATTTTGCAGTGCTCTGGAGTCCGTTGCTGGCTCTTTGGAACATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | CTAACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACCTCCCAATCCATaGTGTAGCTGCTTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTMVMSCQWKGTGHPFLEQPPNP*CSCFSL Trigger: GAGGCTGAAGCAGCTACACAATGGATTGGGAGGTTG...TTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAACAGGCCTTTGGGAGAGAACAGTATGCTCTCTTAGACACCTCAACTAGTCAACCTCCCAATCCATaGTGTAGCTGCTTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GEQAFGREQYALLDTSTSQPPNP*CSCFSL Trigger: GAGGCTGAAGCAGCTACACAATGGATTGGGAGGTTG...ACTAGTTGAGGTGTCTAAGAGAGCATACTGTTCTCTCCCAAAGGCCTGTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | AATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTCTGAGGACTGTGAGGTaGTGTACACACAACCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NGNVLPVERYRAPFLGTTLRTVR*CTHNLP Trigger: TGGGAGGTTGTGTGTACACAACCTCACAGTCCTCAG...AGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | CCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAAACCCACGGTTCCTaGATTGTTAACTGCAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: PVERYRAPFLGTTWRSSIKTHGS*IVNCKT Trigger: CGTCTTGCAGTTAACAATCAAGGAACCGTGGGTTTT...GATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS TCA 90 bp | CAGAATCTGCTTGACAGGACCAAAGGTGTCCATACTTCGTGTCAATaGGGATTTCACCACCATCATGTTCCAAAGAGCCAGCAACGGACT | + |
|
Preference number: 5 (lower is better) Translates to: QNLLDRTKGVHTSCQ*GFHHHHVPKSQQRT Trigger: AGTCCGTTGCTGGCTCTTTGGAACATGATGGTGGTGAAATCCTCATTGACACGAAGTATGGACACCTTTGGTCCTGTCAAGCAGATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS TCA 90 bp | CGTGACAGCGTATCTGACCAGTTACCAACAGAGGCAGAATCTGCTTaGCAGGACCAAAGGTGTCCATACTTCGTGTCAATGAGGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RDSVSDQLPTEAESA*QDQRCPYFVSMRIS Trigger: TGAAATCCTCATTGACACGAAGTATGGACACCTTTGGTCCTGTCAAGCAGATTCTGCCTCTGTTGGTAACTGGTCAGATACGCTGTCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS GCA 90 bp | ATGCAGCTTTGCCTGAGTACACCCATCATCTCTGACAATAGCTTCTaGCTCGTGATGAACCTTGTGTCTGACATATGCAGCCAAGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: MQLCLSTPIISDNSF*LVMNLVSDICSQVC Trigger: ACACACTTGGCTGCATATGTCAGACACAAGGTTCATCACGAGGCAGAAGCTATTGTCAGAGATGATGGGTGTACTCAGGCAAAGCTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | AATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTTGGGTGGATTACTTTTaGGCACAGGACAAGGTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NGNVLPVERYRAPFLGTTWVDYF*AQDKVY Trigger: GTAGACCTTGTCCTGTGCCAAAAAGTAATCCACCCA...AGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTAAGAGGCAGAATCTGCTaGACAGGACCAAAGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTTWRSSIKAISIFLGDLRGRIC*TGPKVS Trigger: GGACACCTTTGGTCCTGTCAAGCAGATTCTGCCTCT...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | GGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTAGCTCTTCCTGGCTGTaGTACAAACCACAGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: GTLSWNNLEKQHQGNFHFSSSWL*YKPQPH Trigger: GTGTGGCTGTGGTTTGTACAACAGCCAGGAAGAGCT...AAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCAAACTTAAATGTGTGTGAGGACACCAAAAGTGGGGTGATGGTGATGAAATGTAAGCCACTCAGCTaGGCAGTGAAGCAGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PPNLNVCEDTKSGVMVMKCKPLS*AVKQST Trigger: TGTGGACTGCTTCACTGCCAAGCTGAGTGGCTTACA...TTTCATCACCATCACCCCACTTTTGGTGTCCTCACACACATTTAAGTTTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | GGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATGTAAGCCACTCAGCTaGGCAGTGAAGCAGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GTTWRSSIKAISIFLGDLCKPLS*AVKQST Trigger: TGTGGACTGCTTCACTGCCAAGCTGAGTGGCTTACA...TAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS CCA 90 bp | GTCGATGGCCATAACGTGGCGCTCACTGAAGAACTGTTTCAAAGATaGGTGGATTACTTTTTGGCACAGGACAAGGTCTACATGATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VDGHNVALTEELFQR*VDYFLAQDKVYMIS Trigger: ACTGATCATGTAGACCTTGTCCTGTGCCAAAAAGTAATCCACCCATCTTTGAAACAGTTCTTCAGTGAGCGCCACGTTATGGCCATCGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS CCA 90 bp | AGAGATTCCATCAGAGTCACCCCAACTCTGTCGATGGCCATAACGTaGCGCTCACTGAAGAACTGTTTCAAAGATGGGTGGATTACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RDSIRVTPTLSMAIT*RSLKNCFKDGWITF Trigger: AAAAGTAATCCACCCATCTTTGAAACAGTTCTTCAGTGAGCGCCACGTTATGGCCATCGACAGAGTTGGGGTGACTCTGATGGAATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | ACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTCTGAGGACTGTGAGGTaGTGTACACACAACCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLSWNNLEKQHQGNFHFPLRTVR*CTHNLP Trigger: TGGGAGGTTGTGTGTACACAACCTCACAGTCCTCAG...AGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | AATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAACAACTGTTTGGAGCCAAATCTaGCAGAGCACACATCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NGNVLPVERYRAPFLGTTVWSQI*QSTHLS Trigger: TGAAAGATGTGTGCTCTGCAAGATTTGGCTCCAAAC...AGTTGTTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
||
| CDS-3UTR CAA 90 bp | CTAACAATGGTAATGTCCTGCCAGTGGAAAGGTACAGGGCACCCTTTCTTGGAAGTTTGGAGCCAAATCTaGCAGAGCACACATCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTMVMSCQWKGTGHPFLEVWSQI*QSTHLS Trigger: TGAAAGATGTGTGCTCTGCAAGATTTGGCTCCAAAC...TTCCAAGAAAGGGTGCCCTGTACCTTTCCACTGGCAGGACATTACCATTGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | GGCACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTGACGTGCATTGCTGTTaGACATGTGAGCTTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GTLSWNNLEKQHQGNFHFDVHCC*TCELQL Trigger: GAGCTGAAGCTCACATGTCAAACAGCAATGCACGTC...AAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS CCA 90 bp | ACTGTGTACCAAGCTGAGGAAGGTATGTGTACTTCTGAAGTCAACTaGGATTCGACAACTACAGGCTTCAGACTTGAGATAACTGGTACA | + |
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Preference number: 5 (lower is better) Translates to: TVYQAEEGMCTSEVN*DSTTTGFRLEITGT Trigger: TGTACCAGTTATCTCAAGTCTGAAGCCTGTAGTTGTCGAATCCCAGTTGACTTCAGAAGTACACATACCTTCCTCAGCTTGGTACACAGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTAAGAGGCAGAATCTGCTaGACAGGACCAAAGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: KSSNVSSRKDQALQKASVRGRIC*TGPKVS Trigger: GGACACCTTTGGTCCTGTCAAGCAGATTCTGCCTCT...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | GAACAGTATGCTCTCTTAGACACCTCAACTAGTTTGCTTCAGAACATATATATGAGCTCTTCCTGGCTGTaGTACAAACCACAGCCACAC | + |
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Preference number: 5 (lower is better) Translates to: EQYALLDTSTSLLQNIYMSSSWL*YKPQPH Trigger: GTGTGGCTGTGGTTTGTACAACAGCCAGGAAGAGCT...CATATATATGTTCTGAAGCAAACTAGTTGAGGTGTCTAAGAGAGCATACTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 90 bp | TTCAAAGATGGGTGGATTACTTTTTGGCACAGGACAAGGTCTACATaGTCAGTGACTAGTCGCCTTCCTAGATTAAGCAACTGCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: FKDGWITFWHRTRST*SVTSRLPRLSNCSK Trigger: TTTAGAGCAGTTGCTTAATCTAGGAAGGCGACTAGTCACTGATCATGTAGACCTTGTCCTGTGCCAAAAAGTAATCCACCCATCTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTAGACGTGCATTGCTGTTaGACATGTGAGCTTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: KSSNVSSRKDQALQKASVDVHCC*TCELQL Trigger: GAGCTGAAGCTCACATGTCAAACAGCAATGCACGTC...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | ACCCTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGATCTAAAATCAAATaGGCTGTCTCTACAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: TLSWNNLEKQHQGNFHFPRSKIK*AVSTAT Trigger: GGTGGCTGTAGAGACAGCCAATTTGATTTTAGATCT...AGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | CTTTCTTGGAACAACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGAGATCTAAAATCAAATaGGCTGTCTCTACAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: LSWNNLEKQHQGNFHFPRRSKIK*AVSTAT Trigger: GGTGGCTGTAGAGACAGCCAATTTGATTTTAGATCT...CCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGTTGTTCCAAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | ACTTGGAGAAGCAGCATCAAGGCAATTTCCATTTTCCTAGGTGACCTATTATTTAAAACCCACGGTTCCTaGATTGTTAACTGCAAGACG | + |
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Preference number: 5 (lower is better) Translates to: TWRSSIKAISIFLGDLLFKTHGS*IVNCKT Trigger: CGTCTTGCAGTTAACAATCAAGGAACCGTGGGTTTT...AAATAATAGGTCACCTAGGAAAATGGAAATTGCCTTGATGCTGCTTCTCCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | GAACAGTATGCTCTCTTAGACACCTCAACTAGTTTGCTTCAGAACATATATATGGTTGCTCCTGTCACTTaGCTTAGAGATTCCATCAGA | + |
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Preference number: 5 (lower is better) Translates to: EQYALLDTSTSLLQNIYMVAPVT*LRDSIR Trigger: TCTGATGGAATCTCTAAGCAAAGTGACAGGAGCAAC...CATATATATGTTCTGAAGCAAACTAGTTGAGGTGTCTAAGAGAGCATACTGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGCAATGTATCATCAAGGAAGGATCAAGCTTTACAAAAAGCTAGTGTAGTTGCTCCTGTCACTTaGCTTAGAGATTCCATCAGA | + |
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Preference number: 5 (lower is better) Translates to: KSSNVSSRKDQALQKASVVAPVT*LRDSIR Trigger: TCTGATGGAATCTCTAAGCAAAGTGACAGGAGCAAC...TACACTAGCTTTTTGTAAAGCTTGATCCTTCCTTGATGATACATTGCTGCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 72 bp | CTTGGCAGTGAAGCAGTCCACAGTCAGGTTACTGGCTaGGCCCAAAGCTGCCTGTGGAAGGCAGGTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LGSEAVHSQVTG*AQSCLWKAGLW Trigger: CCACAAACCTGCCTTCCACAGGCAGCTTTGGGCTCAGCCAGTAACCTGACTGTGGACTGCTTCACTGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 72 bp | TCTCTACAGCCACCTGTAAGCCACTCAGCTTGGCAGTaGAGCAGTCCACAGTCAGGTTACTGGCTGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLQPPVSHSAWQ*SSPQSGYWLSP Trigger: TGGGCTCAGCCAGTAACCTGACTGTGGACTGCTTCACTGCCAAGCTGAGTGGCTTACAGGTGGCTGTAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 72 bp | GCACGGATGACGTTAGGATCTTTAATACGGGATGGGTaGCTGAAAGGTTTCGAAGCAGGGCTGAGGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: ARMTLGSLIRDG*LKGFEAGLRTV Trigger: CACAGTCCTCAGCCCTGCTTCGAAACCTTTCAGTCACCCATCCCGTATTAAAGATCCTAACGTCATCCGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS GCA 72 bp | CATGTTCCAAAGAGCCAGCAACGGACTCCAGAGCACTaGAAAATGCTTCAGCAGCAACATGCAGCTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: HVPKSQQRTPEH*KMLQQQHAALP Trigger: AGGCAAAGCTGCATGTTGCTGCTGAAGCATTTTGCAGTGCTCTGGAGTCCGTTGCTGGCTCTTTGGAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS CCA 72 bp | ATCAGAGTCACCCCAACTCTGTCGATGGCCATAACGTaGCGCTCACTGAAGAACTGTTTCAAAGATGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: IRVTPTLSMAIT*RSLKNCFKDGW Trigger: CCACCCATCTTTGAAACAGTTCTTCAGTGAGCGCCACGTTATGGCCATCGACAGAGTTGGGGTGACTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS CAA 90 bp | AAAATCAAATTGGCTGTCTCTACAGCCACCTGTAAGCCACTCAGCTaGGCAGTGAAGCAGTCCACAGTCAGGTTACTGGCTGAGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: KIKLAVSTATCKPLS*AVKQSTVRLLAEPK Trigger: TTTGGGCTCAGCCAGTAACCTGACTGTGGACTGCTTCACTGCCAAGCTGAGTGGCTTACAGGTGGCTGTAGAGACAGCCAATTTGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS GCA 72 bp | AGCTTCTGCCTCGTGATGAACCTTGTGTCTGACATATaGAGCCAAGTGTGTTTCTGTACAGCCACCTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SFCLVMNLVSDI*SQVCFCTATSQ Trigger: TTGGGAGGTGGCTGTACAGAAACACACTTGGCTGCATATGTCAGACACAAGGTTCATCACGAGGCAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS CCA 72 bp | TTCTGCACGGATGACGTTAGGATCTTTAATACGGGATaGGTGACTGAAAGGTTTCGAAGCAGGGCTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: FCTDDVRIFNTG*VTERFRSRAED Trigger: GTCCTCAGCCCTGCTTCGAAACCTTTCAGTCACCCATCCCGTATTAAAGATCCTAACGTCATCCGTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 72 bp | GCTGTGAATAAGCCGCAGTCACTGAAGCAGGACACGTaGTTCTGCACGGATGACGTTAGGATCTTTAATACG | + |
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Preference number: 6 (lower is better) Translates to: AVNKPQSLKQDT*FCTDDVRIFNT Trigger: CGTATTAAAGATCCTAACGTCATCCGTGCAGAATCACGTGTCCTGCTTCAGTGACTGCGGCTTATTCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS GCA 72 bp | TGCCTGAGTACACCCATCATCTCTGACAATAGCTTCTaGCTCGTGATGAACCTTGTGTCTGACATATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CLSTPIISDNSF*LVMNLVSDICS Trigger: GCTGCATATGTCAGACACAAGGTTCATCACGAGGCAGAAGCTATTGTCAGAGATGATGGGTGTACTCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 72 bp | CTGTACAGCCACCTCCCAATAAAACCCACGGTTCCTTaGTTGTTAACTGCAAGACGTGCATTGCTGTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LYSHLPIKPTVP*LLTARRALLFD Trigger: GTCAAACAGCAATGCACGTCTTGCAGTTAACAATCAAGGAACCGTGGGTTTTATTGGGAGGTGGCTGTACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 72 bp | GTATCTGACCAGTTACCAACAGAGGCAGAATCTGCTTaGCAGGACCAAAGGTGTCCATACTTCGTGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: VSDQLPTEAESA*QDQRCPYFVSM Trigger: CATTGACACGAAGTATGGACACCTTTGGTCCTGTCAAGCAGATTCTGCCTCTGTTGGTAACTGGTCAGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS GCA 72 bp | AGCACTGCAAAATGCTTCAGCAGCAACATGCAGCTTTaGCTGAGTACACCCATCATCTCTGACAATAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: STAKCFSSNMQL*LSTPIISDNSF Trigger: GAAGCTATTGTCAGAGATGATGGGTGTACTCAGGCAAAGCTGCATGTTGCTGCTGAAGCATTTTGCAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 72 bp | GGGTGGATTACTTTTTGGCACAGGACAAGGTCTACATaGTCAGTGACTAGTCGCCTTCCTAGATTAAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: GWITFWHRTRST*SVTSRLPRLSN Trigger: GTTGCTTAATCTAGGAAGGCGACTAGTCACTGATCATGTAGACCTTGTCCTGTGCCAAAAAGTAATCCACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS CCA 72 bp | GACAGAAAGTGTGGACCTGACTTTCTCACTTGTCAATaGTTCAGTTTTACACAACGATGGCTTCTTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DRKCGPDFLTCQ*FSFTQRWLLSF Trigger: GAAGCTAAGAAGCCATCGTTGTGTAAAACTGAACCATTGACAAGTGAGAAAGTCAGGTCCACACTTTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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| CDS TCA 72 bp | AGTCAACTGGGATTCGACAACTACAGGCTTCAGACTTaGGATAACTGGTACAGAGACTCAAGAGGTATTTAT | + |
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Preference number: 6 (lower is better) Translates to: SQLGFDNYRLQT*DNWYRDSRGIY Trigger: ATAAATACCTCTTGAGTCTCTGTACCAGTTATCTCAAGTCTGAAGCCTGTAGTTGTCGAATCCCAGTTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028730.13 ENSMUST00000110089.9 |
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