Pregenerated sensors for MITF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035158Ensembl transcript IDs: ENSMUST00000043628.13, ENSMUST00000043637.14, ENSMUST00000101123.10, ENSMUST00000113339.8, ENSMUST00000139462.2, ENSMUST00000203884.3, ENSMUST00000203938.2
Found 532 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTCCATCAGGATGTCTTCCAAGTTGGAGCCCATCTTCCTGGGGATaGTGTAGGCCGGGCTGCTCTCCGGCATGGTGCCGAGGTTGTTGG | + |
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Preference number: 1 (lower is better) Translates to: RPSGCLPSWSPSSWG*CRPGCSPAWCRGCW Trigger: CCAACAACCTCGGCACCATGCCGGAGAGCAGCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCCTGATGGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR GCA 90 bp | CAGAGACCGGTGGATGGGATAAGGGAAAGTCCATGCGCTCTAGCCTaGATCTCCAGCTCCTGTACTCTGAGCAGCAGGTGCCGGTTCGCA | + |
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Preference number: 1 (lower is better) Translates to: QRPVDGIRESPCALA*ISSSCTLSSRCRFA Trigger: TGCGAACCGGCACCTGCTGCTCAGAGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR GCA 90 bp | AGATCAGGCGAGCAGAGACCGGTGGATGGGATAAGGGAAAGTCCATaGGCTCTAGCCTGCATCTCCAGCTCCTGTACTCTGAGCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RSGEQRPVDGIRESP*ALACISSSCTLSSR Trigger: CCTGCTGCTCAGAGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTGCTCGCCTGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR GCA 90 bp | AATTGCTTGCCTGCCTCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTaGCTGGAAAGCCCATGGTGGCAAGCTCAGAGGCTACAAGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: NCLPASPSSCVLGGR*LESPWWQAQRLQAK Trigger: CTTGGCTTGTAGCCTCTGAGCTTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGGAGAGGCAGGCAAGCAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR GCA 90 bp | GGCAGGCTCGCTAACACGCATGCTCCGTTTCTTCTGCGCTCATACTaGTCCTCCGGCTGCTTGTTTTTGAAGCTCCTGGCGACACTGATG | + |
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Preference number: 1 (lower is better) Translates to: GRLANTHAPFLLRSY*SSGCLFLKLLATLM Trigger: CATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGTGTTAGCGAGCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR GCA 90 bp | TGCATCTCCAGCTCCTGTACTCTGAGCAGCAGGTGCCGGTTCGCATaGTCCAGCTTCTTCTGTCGGTTTTCAAGGTCCTTAGCTCGTTGC | + |
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Preference number: 1 (lower is better) Translates to: CISSSCTLSSRCRFA*SSFFCRFSRSLARC Trigger: GCAACGAGCTAAGGACCTTGAAAACCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCTGCTGCTCAGAGTACAGGAGCTGGAGATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR CCA 90 bp | CCCAGCAGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATGGTaGCAAGCTCAGAGGCTACAAGCCAAGGTAATGGTGCAATATGCC | + |
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Preference number: 1 (lower is better) Translates to: PSSCVLGGRCLESPW*QAQRLQAKVMVQYA Trigger: GGCATATTGCACCATTACCTTGGCTTGTAGCCTCTGAGCTTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR GCA 90 bp | AACACGCATGCTCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTaGTTGTTTTTGAAGCTCCTGGCGACACTGATGACAGCAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: NTHAPFLLRSYCSSG*LFLKLLATLMTAVG Trigger: ACCCACTGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR TCA 90 bp | TTGTTTTTGAAGCTCCTGGCGACACTGATGACAGCAGTGGGTCGGTaGCTCCAACAGGTGAGAGGGCATCGTCCATCAGGATGTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LFLKLLATLMTAVGR*LQQVRGHRPSGCLP Trigger: TGGAAGACATCCTGATGGACGATGCCCTCTCACCTGTTGGAGTCACCGACCCACTGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR GCA 90 bp | CCGTCCGTGAGATCCAGAGTTGTCGTACATGTCAGGTCTGCCTGGTaGTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: PSVRSRVVVHVRSAW*CTSSWLQFSRTGSC Trigger: GCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCTGGATCTCACGGACGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR GCA 90 bp | GATGGTACCGTCCGTGAGATCCAGAGTTGTCGTACATGTCAGGTCTaGCTGGTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTGG | + |
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Preference number: 1 (lower is better) Translates to: DGTVREIQSCRTCQV*LVLYKFLAAVLKNW Trigger: CCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCTGGATCTCACGGACGGTACCATC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR CCA 90 bp | TCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATaGTGGCAAGCTCAGAGGCTACAAGCCAAGGTAATGGTGCAATAT | + |
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Preference number: 1 (lower is better) Translates to: SPSSCVLGGRCLESP*WQAQRLQAKVMVQY Trigger: ATATTGCACCATTACCTTGGCTTGTAGCCTCTGAGCTTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR GCA 90 bp | TGGTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCTTaGTTGATGATCCGATTCACCAGATCAGGCGAGCAGAGACCGGTG | + |
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Preference number: 1 (lower is better) Translates to: WCCTSSWLQFSRTGS*LMIRFTRSGEQRPV Trigger: CACCGGTCTCTGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR CCA 90 bp | GTCTGCCTGGTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTaGTTCTTGCTTGATGATCCGATTCACCAGATCAGGCGAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: VCLVLYKFLAAVLKN*FLLDDPIHQIRRAE Trigger: CTCTGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR CCA 90 bp | GTACCGTCCGTGAGATCCAGAGTTGTCGTACATGTCAGGTCTGCCTaGTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: VPSVRSRVVVHVRSA*CCTSSWLQFSRTGS Trigger: AGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCTGGATCTCACGGACGGTAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR TCA 90 bp | ACCGCGCACTTGACGAATCTCACCAAGGCCATCCATTCATACATCTaGCAATCACTGCTCTTGGATCTCTCCATCACCCATCACCAATTC | + |
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Preference number: 1 (lower is better) Translates to: TAHLTNLTKAIHSYI*QSLLLDLSITHHQF Trigger: GAATTGGTGATGGGTGATGGAGAGATCCAAGAGCAGTGATTGTCAGATGTATGAATGGATGGCCTTGGTGAGATTCGTCAAGTGCGCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR CCA 90 bp | AGAGTTGTCGTACATGTCAGGTCTGCCTGGTGCTGTACAAGTTCCTaGCTGCAGTTCTCAAGAACTGGTTCTTGCTTGATGATCCGATTC | + |
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Preference number: 1 (lower is better) Translates to: RVVVHVRSAWCCTSS*LQFSRTGSCLMIRF Trigger: GAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR GCA 90 bp | CTGGATAGCATCATCAGTGTTTCCAAAGATTTGCATTACCCAACATaGATGGGAACCGCGCACTTGACGAATCTCACCAAGGCCATCCAT | + |
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Preference number: 1 (lower is better) Translates to: LDSIISVSKDLHYPT*MGTAHLTNLTKAIH Trigger: ATGGATGGCCTTGGTGAGATTCGTCAAGTGCGCGGTTCCCATGCATGTTGGGTAATGCAAATCTTTGGAAACACTGATGATGCTATCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR GCA 90 bp | ATAAATAAAACCATTCCCTATGTTGTCACCTCTAAATTGCTTGCCTaGCTCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: INKTIPYVVTSKLLA*LSQQLCLRRKVPGK Trigger: CTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGGAGAGGCAGGCAAGCAATTTAGAGGTGACAACATAGGGAATGGTTTTATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR TCA 90 bp | AAGGGTATGCTTTATGCCACACAGGATTCAATCGTAGGCTGCTACTaGGAAATTCCATTAGGCAGCCTGGCTTGTACCAGTATGTATCAC | + |
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Preference number: 1 (lower is better) Translates to: KGMLYATQDSIVGCY*EIPLGSLACTSMYH Trigger: GTGATACATACTGGTACAAGCCAGGCTGCCTAATGGAATTTCTCAGTAGCAGCCTACGATTGAATCCTGTGTGGCATAAAGCATACCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR GCA 90 bp | ATGGTGGCAAGCTCAGAGGCTACAAGCCAAGGTAATGGTGCAATATaGCATACTTTCTTTCAACAAAGCTTCCTAGAAAGTTGCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: MVASSEATSQGNGAI*HTFFQQSFLESCSA Trigger: GGCAGAGCAACTTTCTAGGAAGCTTTGTTGAAAGAAAGTATGGCATATTGCACCATTACCTTGGCTTGTAGCCTCTGAGCTTGCCACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR GCA 90 bp | CCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTaGACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: PCSESSHLEKSVHRY*TLKVQYLGGLCSCK Trigger: TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| 3UTR GCA 90 bp | CTGCTGAGATTTTTAAGGCACTTCATTCTGAAAGGGTATGCTTTATaGCACACAGGATTCAATCGTAGGCTGCTACTGAGAAATTCCATT | + |
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Preference number: 1 (lower is better) Translates to: LLRFLRHFILKGYAL*HTGFNRRLLLRNSI Trigger: AATGGAATTTCTCAGTAGCAGCCTACGATTGAATCCTGTGTGGCATAAAGCATACCCTTTCAGAATGAAGTGCCTTAAAAATCTCAGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR GCA 90 bp | GGTGCAATATGCCATACTTTCTTTCAACAAAGCTTCCTAGAAAGTTaGTCTGCCTTGGCCATAGTCAACTTTGTGAAACCTTGTTCAATT | + |
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Preference number: 1 (lower is better) Translates to: GAICHTFFQQSFLES*SALAIVNFVKPCSI Trigger: AATTGAACAAGGTTTCACAAAGTTGACTATGGCCAAGGCAGAGCAACTTTCTAGGAAGCTTTGTTGAAAGAAAGTATGGCATATTGCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR GCA 90 bp | TTCAATTATTTCATTGGATACATTAATATCAATCATAATATACAGTaGTGCGGACCATACAGAAAGTATTGCTGTACCCAACAGCGGGGG | + |
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Preference number: 1 (lower is better) Translates to: FNYFIGYININHNIQ*CGPYRKYCCTQQRG Trigger: CCCCCGCTGTTGGGTACAGCAATACTTTCTGTATGGTCCGCAGCACTGTATATTATGATTGATATTAATGTATCCAATGAAATAATTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGCGAGCAGAGACCGGTGGATGGGATAAGGGAAAGTCCATGCGCTCTAGCGCTGATGGTAAGGCCTaGCGGTGGCAGGCCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: IRRAETGGWDKGKSMRSSADGKA*RWQALV Trigger: AACCAGGGCCTGCCACCGCCAGGCCTTACCATCAGC...GCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTGCTCGCCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR CAA 90 bp | ACGCATGCTCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTGCTaGTTTTTGAAGCTCCTGGCGACACTGATGACAGCAGTGGGTCGG | + |
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Preference number: 2 (lower is better) Translates to: THAPFLLRSYCSSGC*FLKLLATLMTAVGR Trigger: CCGACCCACTGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCGCTAACACGCATGCTCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT | + |
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Preference number: 2 (lower is better) Translates to: RLANTHAPFLLRSYCSSGVGKVG*TGVADG Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...GCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGTGTTAGCGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCAGAGGGAGCGGTCCGTaGAGAGGCAGAGCAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PLAQKAHTWRNQFTDTARRGSGP*RGRARQ Trigger: CTGCCTTGCTCTGCCTCTGCACGGACCGCTCCCTCT...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGAGAGGGCATCGTCCATCAGGATGTCTTCCAAGTTGGAGCCCATCTTCCTGGCAGAGACCGGTGGATaGGATAAGGGAAAGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: GERASSIRMSSKLEPIFLAETGG*DKGKSM Trigger: CATGGACTTTCCCTTATCCCATCCACCGGTCTCTGC...CAGGAAGATGGGCTCCAACTTGGAAGACATCCTGATGGACGATGCCCTCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACAGAGGGAGCGGTCCGTaGAGAGGCAGAGCAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: IPLLRKLTLGEISSQILHRGSGP*RGRARQ Trigger: CTGCCTTGCTCTGCCTCTGCACGGACCGCTCCCTCT...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGGTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCTTGCTTAGGTGCCGGTTCGCATaGTCCAGCTTCTTCTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: CLVLYKFLAAVLKNWFLLRCRFA*SSFFCR Trigger: CCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCT...AAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR CAA 90 bp | CTGGTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCTaGCTTGATGATCCGATTCACCAGATCAGGCGAGCAGAGACCGGT | + |
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Preference number: 2 (lower is better) Translates to: LVLYKFLAAVLKNWF*LDDPIHQIRRAETG Trigger: ACCGGTCTCTGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGAGAGGGAGCGGTCCGTaGAGAGGCAGAGCAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EISSQILHAEGTILRRPLRGSGP*RGRARQ Trigger: CTGCCTTGCTCTGCCTCTGCACGGACCGCTCCCTCT...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| 3UTR-3UTR GCA 90 bp | ATCAGGCGAGCAGAGACCGGTGGATGGGATAAGGGAAAGTCCATGCGCTCTAGCTTTAGCCAATGCTCTTaGTTCAGACTCTGTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: IRRAETGGWDKGKSMRSSFSQCS*FRLCGE Trigger: TTCCCCACAGAGTCTGAAGCAAGAGCATTGGCTAAA...GCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTGCTCGCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR GCA 90 bp | TCGCTAACACGCATGCTCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTGCTCCTCTCTTTAGCCAATaGTCTTGCTTCAGACTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SLTRMLRFFCAHTAPPAAPLFSQ*SCFRLC Trigger: ACAGAGTCTGAAGCAAGAGCATTGGCTAAAGAGAGG...AGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGTGTTAGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGGTAAGGCCTGGCGGTaGCAGGCCCTGGTTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: EISSQILHAEGTILRRPLGKAWR*QALVAV Trigger: TACAGCAACCAGGGCCTGCCACCGCCAGGCCTTACC...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR CAA 90 bp | TGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCTTGCTaGATGATCCGATTCACCAGATCAGGCGAGCAGAGACCGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: CCTSSWLQFSRTGSC*MIRFTRSGEQRPVD Trigger: ATCCACCGGTCTCTGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGAGGGCATCGTCCATCAGGATGTCTTCCAAGTTGGAGCCCATCTTCCTGGGAAAATACACGCTGTaGGCTCCCTTTTTATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: GERASSIRMSSKLEPIFLGKYTL*APFLCW Trigger: CCAACATAAAAAGGGAGCTCACAGCGTGTATTTTCC...CAGGAAGATGGGCTCCAACTTGGAAGACATCCTGATGGACGATGCCCTCTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTAGAGGGAGCGGTCCGTaGAGAGGCAGAGCAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: HLESEKVLDVFPTIFLPPRGSGP*RGRARQ Trigger: CTGCCTTGCTCTGCCTCTGCACGGACCGCTCCCTCT...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGAGGGCATCGTCCATCAGGATGTCTTCCAAGTTGGAGCCCATCTTCCTGTCAAGAACTGGTTCTTaGTTGATGATCCGATTCACC | + |
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Preference number: 2 (lower is better) Translates to: GERASSIRMSSKLEPIFLSRTGS*LMIRFT Trigger: GGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGA...CAGGAAGATGGGCTCCAACTTGGAAGACATCCTGATGGACGATGCCCTCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTGCTTGTTTTTGAAGCTCCTAACGTATTTGCCATTTaGAAGGCCGGATCCATCAAG | + |
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Preference number: 2 (lower is better) Translates to: SVSSALILLLRLLVFEAPNVFAI*KAGSIK Trigger: CTTGATGGATCCGGCCTTGCAAATGGCAAATACGTT...AGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCAAGAACTGGTTCTTGCTTGATGATCCGATTCACCAGATCAGGCGAGCAATAAGGGAAAGTCCATaGGCTCTAGCCTGCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: VLKNWFLLDDPIHQIRRAIRESP*ALACIS Trigger: GGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTAT...TGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTGCTTGTTTTTGAAGCTCCTCTGGATCATTTGACTTaGGGATCAGAGTACCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: SVSSALILLLRLLVFEAPLDHLT*GSEYLA Trigger: AGCTAGGTACTCTGATCCCCAAGTCAAATGATCCAG...AGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| 3UTR-3UTR GCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTAGAGGGAGCGGTCCGTaGAGAGGCAGAGCAAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFRGSGP*RGRARQ Trigger: CTGCCTTGCTCTGCCTCTGCACGGACCGCTCCCTCT...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATGGTGGCAAGGTAATGGTGCAATATaGCATACTTTCTTTCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: SPSSCVLGGRCLESPWWQGNGAI*HTFFQQ Trigger: TTGTTGAAAGAAAGTATGGCATATTGCACCATTACC...TTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 90 bp | CAGAGGCACCACGCTACGTCTTCCTTCTTCACTCCAGATTCCATCTaGAAACTTTCTCCTAGTTACAGTTCAGTCAGTGCTGGTCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QRHHATSSFFTPDSI*KLSPSYSSVSAGPK Trigger: TTTTGGACCAGCACTGACTGAACTGTAACTAGGAGAAAGTTTCAAGATGGAATCTGGAGTGAAGAAGGAAGACGTAGCGTGGTGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 90 bp | GGTTGCTGTAGAGGTCGATCAAGTTTCCAGAGACGGGTAACGTATTaGCCATTTGCAAGGCCGGATCCATCAAGCCCAAAATTTCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GCCRGRSSFQRRVTY*PFARPDPSSPKFLH Trigger: ATGAAGAAATTTTGGGCTTGATGGATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCTCTGGAAACTTGATCGACCTCTACAGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGGATGTCTTCCAAGTTaGAGCCCATCTTCCTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KIPLLRKLTLGEISSQILGCLPS*SPSSWG Trigger: TCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGACGTACATGTCAGGTCTaGCTGGTGCTGTACAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGRTCQV*LVLYKF Trigger: GAACTTGTACAGCACCAGGCAGACCTGACATGTACG...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR CAA 90 bp | TATTTCCGTTACCTTACCCAGAGGCAGGTGGATAATTTTGGTATTTaGAGCACTCTAAACGGAGGTCCAACCCTGAGATACAATTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YFRYLTQRQVDNFGI*STLNGGPTLRYNSA Trigger: TGCAGAATTGTATCTCAGGGTTGGACCTCCGTTTAGAGTGCTCAAAATACCAAAATTATCCACCTGCCTCTGGGTAAGGTAACGGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTCTCAAGAACTGGTTCTTGCTTGATGATCCGATTCACCAGATCAGGCGAGTTCTTCATTATAACTTaGTTCCAGGCTGATGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: QFSRTGSCLMIRFTRSGEFFIIT*FQADDV Trigger: GACATCATCAGCCTGGAATCAAGTTATAATGAAGAA...CTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAAAGTTTTCCCCTGAATaGAAACGGACAGACACTTAC | + |
|
Preference number: 2 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKKFSPE*KRTDTY Trigger: GTAAGTGTCTGTCCGTTTTCATTCAGGGGAAAACTT...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGAAGTTTTCCCCTGAATaGAAACGGACAGACACTTAC | + |
|
Preference number: 2 (lower is better) Translates to: KIPLLRKLTLGEISSQILKFSPE*KRTDTY Trigger: GTAAGTGTCTGTCCGTTTTCATTCAGGGGAAAACTT...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGCAGAAAGCTCACACTTaGAGAAATCAGTTCACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLQKAHT*RNQFTD Trigger: ATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTG...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTAAGTTTTCCCCTGAATaGAAACGGACAGACACTTAC | + |
|
Preference number: 2 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTKFSPE*KRTDTY Trigger: GTAAGTGTCTGTCCGTTTTCATTCAGGGGAAAACTT...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGAGCAAAAACACTGCGTCTTGGCTTAACCAGTCCCTGAAAGAATCCACATATGCAAGTAAGCAATaGACAGACACTAACTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: TVSKNTASWLNQSLKESTYASKQ*TDTNFT Trigger: TGTAAAGTTAGTGTCTGTGCATTGCTTACTTGCATA...TGTGGATTCTTTCAGGGACTGGTTAAGCCAAGACGCAGTGTTTTTGCTCACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR-3UTR CCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGACAGAAAGCTCACACTTaGAGAAATCAGTTCACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGQKAHT*RNQFTD Trigger: ATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTG...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTCAGAAAGCTCACACTTaGAGAAATCAGTTCACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLQKAHT*RNQFTD Trigger: ATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTG...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTAAAGCGAGAAAGTCTTaGATGTCTTTCCCACCATCT | + |
|
Preference number: 2 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTKARKS*MSFPPS Trigger: AGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTT...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| 3UTR CAA 90 bp | TGGTGCAATATGCCATACTTTCTTTCAACAAAGCTTCCTAGAAAGTaGCTCTGCCTTGGCCATAGTCAACTTTGTGAAACCTTGTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: WCNMPYFLSTKLPRK*LCLGHSQLCETLFN Trigger: ATTGAACAAGGTTTCACAAAGTTGACTATGGCCAAGGCAGAGCAACTTTCTAGGAAGCTTTGTTGAAAGAAAGTATGGCATATTGCACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR-3UTR CCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTCAGAAAGCTCACACTTaGAGAAATCAGTTCACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTQKAHT*RNQFTD Trigger: ATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTG...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACAATGCTATGATTGTATCGGTGAACACTATGGTACAATTATCTTTTCATGCGACAATCACTGCTCTTaGATCTCTCCATCACCCATC | + |
|
Preference number: 2 (lower is better) Translates to: RQCYDCIGEHYGTIIFSCDNHCS*ISPSPI Trigger: GATGGGTGATGGAGAGATCCAAGAGCAGTGATTGTC...GCATGAAAAGATAATTGTACCATAGTGTTCACCGATACAATCATAGCATTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 90 bp | ACCTGCACAAAACATCTAGACTTGATACATGTAACTCTACAGATATaGCATAGGGTTATGCAAGTAAGCAATGCACAGACACTAACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TCTKHLDLIHVTLQI*HRVMQVSNAQTLTL Trigger: TAAAGTTAGTGTCTGTGCATTGCTTACTTGCATAACCCTATGCAATATCTGTAGAGTTACATGTATCAAGTCTAGATGTTTTGTGCAGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| 3UTR CAA 90 bp | ATTGTATCGGTGAACACTATGGTACAATTATCTTTTCATGCACATTaGCATTTCTATTCTAGGAAAAGAGTCACACACTTAAGGGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: IVSVNTMVQLSFHAH*HFYSRKRVTHLREL Trigger: CAACTCCCTTAAGTGTGTGACTCTTTTCCTAGAATAGAAATGCAAATGTGCATGAAAAGATAATTGTACCATAGTGTTCACCGATACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR-3UTR CCA 90 bp | TATTCTAGGAAAAGAGTCACACACTTAAGGGAGTTGAAAGAATGGGAACTTATTTATCTGAAGGGAAATTaGAAGCTCTTAGAATGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: YSRKRVTHLRELKEWELIYLKGN*KLLECL Trigger: TAGACATTCTAAGAGCTTCCAATTTCCCTTCAGATA...AATAAGTTCCCATTCTTTCAACTCCCTTAAGTGTGTGACTCTTTTCCTAGAATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | GGATGTCTTCCAAGTTGGAGCCCATCTTCCTGGGGATaGTGTAGGCCGGGCTGCTCTCCGGCATGGTGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: GCLPSWSPSSWG*CRPGCSPAWCR Trigger: TCGGCACCATGCCGGAGAGCAGCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR TCA 72 bp | AAGCTCCTGGCGACACTGATGACAGCAGTGGGTCGGTaGCTCCAACAGGTGAGAGGGCATCGTCCATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLLATLMTAVGR*LQQVRGHRPSG Trigger: TCCTGATGGACGATGCCCTCTCACCTGTTGGAGTCACCGACCCACTGCTGTCATCAGTGTCGCCAGGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR GCA 72 bp | GAGCAGAGACCGGTGGATGGGATAAGGGAAAGTCCATaGGCTCTAGCCTGCATCTCCAGCTCCTGTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EQRPVDGIRESP*ALACISSSCTL Trigger: CAGAGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR CCA 72 bp | CCGATTCACCAGATCAGGCGAGCAGAGACCGGTGGATaGGATAAGGGAAAGTCCATGCGCTCTAGCCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PIHQIRRAETGG*DKGKSMRSSLH Trigger: ATGCAGGCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTGCTCGCCTGATCTGGTGAATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR GCA 72 bp | GCTAACACGCATGCTCCGTTTCTTCTGCGCTCATACTaGTCCTCCGGCTGCTTGTTTTTGAAGCTCCTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: ANTHAPFLLRSY*SSGCLFLKLLA Trigger: CGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGTGTTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGACCGGTGGATGGGATAAGGGAAAGTCCATGCGCTCTAGCCTGCATCTCCAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QRPVDGIRESPCALACISSSLFM*GRLAGQ Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...GGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCCGGCTGCTTGTTTTTGAAGCTCCTGGCGACACTGATGACAGCAGTGGGTATGGTGCCGAGGTTGTaGGTAAAGGTGATGGTACCG | + |
|
Preference number: 3 (lower is better) Translates to: SSGCLFLKLLATLMTAVGMVPRL*VKVMVP Trigger: CGGTACCATCACCTTTACCAACAACCTCGGCACCAT...ACCCACTGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR GCA 72 bp | CACTCTAAACGGAGGTCCAACCCTGAGATACAATTCTaGACCCAGGGGTTGGGGAGTGAGAGGCAAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: HSKRRSNPEIQF*TQGLGSERQGS Trigger: TGATCCTTGCCTCTCACTCCCCAACCCCTGGGTGCAGAATTGTATCTCAGGGTTGGACCTCCGTTTAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | AGCTCCTGTACTCTGAGCAGCAGGTGCCGGTTCGCATaGTCCAGCTTCTTCTGTCGGTTTTCAAGGTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSCTLSSRCRFA*SSFFCRFSRSL Trigger: TAAGGACCTTGAAAACCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCTGCTGCTCAGAGTACAGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR GCA 72 bp | GTCCGTGAGATCCAGAGTTGTCGTACATGTCAGGTCTaGCTGGTGCTGTACAAGTTCCTGGCTGCAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VREIQSCRTCQV*LVLYKFLAAVL Trigger: GAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCTGGATCTCACGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR GCA 72 bp | GCTCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTaGTTGTTTTTGAAGCTCCTGGCGACACTGATGACA | + |
|
Preference number: 3 (lower is better) Translates to: APFLLRSYCSSG*LFLKLLATLMT Trigger: TGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR CCA 72 bp | TGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATGGTaGCAAGCTCAGAGGCTACAAGCCAAGGTAATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CVLGGRCLESPW*QAQRLQAKVMV Trigger: CACCATTACCTTGGCTTGTAGCCTCTGAGCTTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CCA 72 bp | AGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATaGTGGCAAGCTCAGAGGCTACAAGCCAAGGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: SCVLGGRCLESP*WQAQRLQAKVM Trigger: CATTACCTTGGCTTGTAGCCTCTGAGCTTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGACCGGTGGATGGGATAAGGGAAAGTCCATGCGCTCTAGCCTGCATCTCCTCTGGATCATTTGACTaGGGGATCAGAGTACCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QRPVDGIRESPCALACISSGSFD*GIRVPS Trigger: GCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGA...GGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTGCTTGTTTTTGAAGCTCCTGGCATGGTGCCGAGGTaGTTGGTAAAGGTGATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SVSSALILLLRLLVFEAPGMVPR*LVKVMV Trigger: TACCATCACCTTTACCAACAACCTCGGCACCATGCC...AGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR GCA 72 bp | ACCATTCCCTATGTTGTCACCTCTAAATTGCTTGCCTaGCTCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TIPYVVTSKLLA*LSQQLCLRRKV Trigger: CACCTTCCTCCTAAGACACAGCTGCTGGGAGAGGCAGGCAAGCAATTTAGAGGTGACAACATAGGGAATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CCA 72 bp | GTGAGATCCAGAGTTGTCGTACATGTCAGGTCTGCCTaGTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VRSRVVVHVRSA*CCTSSWLQFSR Trigger: TCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCTGGATCTCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCAGACGGGTAACGTATTaGCCATTTGCAAGGCCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLAQKAHTWRNQFTDTARRRVTY*PFARPD Trigger: ATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCT...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR GCA 72 bp | ACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCTTaGTTGATGATCCGATTCACCAGATCAGGCGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSSWLQFSRTGS*LMIRFTRSGEQ Trigger: CTGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR GCA 72 bp | AGATCCAGAGTTGTCGTACATGTCAGGTCTGCCTGGTaGTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: RSRVVVHVRSAW*CTSSWLQFSRT Trigger: AGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCTGGATCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR CCA 72 bp | GTACATGTCAGGTCTGCCTGGTGCTGTACAAGTTCCTaGCTGCAGTTCTCAAGAACTGGTTCTTGCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: VHVRSAWCCTSS*LQFSRTGSCLM Trigger: CATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTCAAGAACTGGTTCTTGCTTGATGATCCGATTCACCAGATCAGGCGAGCAAAGGTCCTTAGCTCGTaGCTGTTCCCGTTGCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: VLKNWFLLDDPIHQIRRAKVLSS*LFPLQL Trigger: AAGTTGCAACGGGAACAGCAACGAGCTAAGGACCTT...TGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR CCA 72 bp | GTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTaGTTCTTGCTTGATGATCCGATTCACCAGATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VLYKFLAAVLKN*FLLDDPIHQIR Trigger: CCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGAAAGCGAGAAAGTCTaGGATGTCTTTCCCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: IPLLRKLTLGEISSQILHESEKV*DVFPTI Trigger: GATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTC...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGCTCCTTAATGCGGTCGTTTATGTTAAATCTTCTTCTTCGTTCAATCAAGTTGGCTGGACAGGAGTaGCTGATGGTAAGGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PSSLMRSFMLNLLLRSIKLAGQE*LMVRPG Trigger: GCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAA...CTTGATTGAACGAAGAAGAAGATTTAACATAAACGACCGCATTAAGGAGCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR TCA 72 bp | CTTTATGCCACACAGGATTCAATCGTAGGCTGCTACTaGGAAATTCCATTAGGCAGCCTGGCTTGTACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LYATQDSIVGCY*EIPLGSLACTS Trigger: ACTGGTACAAGCCAGGCTGCCTAATGGAATTTCTCAGTAGCAGCCTACGATTGAATCCTGTGTGGCATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR TCA 72 bp | ATTTGCATTACCCAACATGCATGGGAACCGCGCACTTaGCGAATCTCACCAAGGCCATCCATTCATACATCT | + |
|
Preference number: 3 (lower is better) Translates to: ICITQHAWEPRT*RISPRPSIHTS Trigger: AGATGTATGAATGGATGGCCTTGGTGAGATTCGTCAAGTGCGCGGTTCCCATGCATGTTGGGTAATGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR-3UTR CAA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTCGTTGCTGTTCCCGTaGCAACTTCCGGATGTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTSLLFP*QLPDVV Trigger: GACTACATCCGGAAGTTGCAACGGGAACAGCAACGA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR TCA 72 bp | TTGACGAATCTCACCAAGGCCATCCATTCATACATCTaGCAATCACTGCTCTTGGATCTCTCCATCACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LTNLTKAIHSYI*QSLLLDLSITH Trigger: ATGGGTGATGGAGAGATCCAAGAGCAGTGATTGTCAGATGTATGAATGGATGGCCTTGGTGAGATTCGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | TCACCAAGGCCATCCATTCATACATCTGACAATCACTaGTCTTGGATCTCTCCATCACCCATCACCAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPRPSIHTSDNH*SWISPSPITNS Trigger: TGAATTGGTGATGGGTGATGGAGAGATCCAAGAGCAGTGATTGTCAGATGTATGAATGGATGGCCTTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | ATCATCAGTGTTTCCAAAGATTTGCATTACCCAACATaGATGGGAACCGCGCACTTGACGAATCTCACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IISVSKDLHYPT*MGTAHLTNLTK Trigger: CTTGGTGAGATTCGTCAAGTGCGCGGTTCCCATGCATGTTGGGTAATGCAAATCTTTGGAAACACTGATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | GAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTaGACGCTGAAGGTACAATACTTAGGAGGCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ESSHLEKSVHRY*TLKVQYLGGLC Trigger: ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| 3UTR GCA 72 bp | ATCAAGTTTCCAGAGACGGGTAACGTATTTGCCATTTaGAAGGCCGGATCCATCAAGCCCAAAATTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IKFPETGNVFAI*KAGSIKPKISS Trigger: TGAAGAAATTTTGGGCTTGATGGATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCTCTGGAAACTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR CCA 72 bp | CTCTCCTTAAAAACAGTGAGCAAAAACACTGCGTCTTaGCTTAACCAGTCCCTGAAAGAATCCACATTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLKTVSKNTAS*LNQSLKESTFW Trigger: CCAGAATGTGGATTCTTTCAGGGACTGGTTAAGCCAAGACGCAGTGTTTTTGCTCACTGTTTTTAAGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR-3UTR CAA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGTCAGAAAGCTCACACTaGGAGAAATCAGTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLSESSH*EKSVHR Trigger: TCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGA...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR-3UTR CAA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTTCAGAAAGCTCACACTaGGAGAAATCAGTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCSESSH*EKSVHR Trigger: TCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGA...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTTCAGAAAGCTCACACTaGGAGAAATCAGTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: FRKRESLGCLSHHLSSSSSESSH*EKSVHR Trigger: TCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGA...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTTCAGAAAGCTCACACTaGGAGAAATCAGTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLSESSH*EKSVHR Trigger: TCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGA...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACATGTGCCCAGTTCAGTaGTCTTTATCAAAAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: IPLLRKLTLGEISSQILHMCPVQ*SLSKAK Trigger: TTTTGCTTTTGATAAAGACAACTGAACTGGGCACAT...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | TTTTTAAGGCACTTCATTCTGAAAGGGTATGCTTTATaGCACACAGGATTCAATCGTAGGCTGCTACTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLRHFILKGYAL*HTGFNRRLLLR Trigger: TCTCAGTAGCAGCCTACGATTGAATCCTGTGTGGCATAAAGCATACCCTTTCAGAATGAAGTGCCTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | TGCCATACTTTCTTTCAACAAAGCTTCCTAGAAAGTTaGTCTGCCTTGGCCATAGTCAACTTTGTGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: CHTFFQQSFLES*SALAIVNFVKP Trigger: AGGTTTCACAAAGTTGACTATGGCCAAGGCAGAGCAACTTTCTAGGAAGCTTTGTTGAAAGAAAGTATGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | AGCTCAGAGGCTACAAGCCAAGGTAATGGTGCAATATaGCATACTTTCTTTCAACAAAGCTTCCTAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSEATSQGNGAI*HTFFQQSFLES Trigger: ACTTTCTAGGAAGCTTTGTTGAAAGAAAGTATGGCATATTGCACCATTACCTTGGCTTGTAGCCTCTGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR-3UTR CAA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTCAGAAAGCTCACACTaGGAGAAATCAGTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTSESSH*EKSVHR Trigger: TCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTGAAAGCGAGAAAGTCTaGGATGTCTTTCCCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSESEKV*DVFPTI Trigger: GATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTC...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | TACTTTCTTTCAACAAAGCTTCCTAGAAAGTTGCTCTaGCTTGGCCATAGTCAACTTTGTGAAACCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: YFLSTKLPRKLL*LGHSQLCETLF Trigger: GAACAAGGTTTCACAAAGTTGACTATGGCCAAGGCAGAGCAACTTTCTAGGAAGCTTTGTTGAAAGAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR TCA 72 bp | AAAGAATCTAGCCGGTGTGTTGAAATAAATCCTAATTaGATTGACCATCATGGGCATGGTAAATGCTATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KESSRCVEINPN*IDHHGHGKCYG Trigger: GCCATAGCATTTACCATGCCCATGATGGTCAATTCAATTAGGATTTATTTCAACACACCGGCTAGATTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR GCA 72 bp | TTCATTGGATACATTAATATCAATCATAATATACAGTaGTGCGGACCATACAGAAAGTATTGCTGTACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FIGYININHNIQ*CGPYRKYCCTQ Trigger: TTGGGTACAGCAATACTTTCTGTATGGTCCGCAGCACTGTATATTATGATTGATATTAATGTATCCAATGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR CCA 90 bp | GTCAGGTCTGCCTGGTGCTGTACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTGCTGCTCCCCGGCACTaGTGGCATGGCATGGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRSAWCCTSSWLQFSRTGAAPRH*WHGMVA Trigger: GGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGC...ACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTCGCTAACACGCATGCTCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCGCATGGTCGCCAGGCTaGTTTGGACATGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLANTHAPFLLRSYCSSGAWSPG*FGHGEL Trigger: GAGCTCACCATGTCCAAACCAGCCTGGCGACCATGC...GCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGTGTTAGCGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCGGCTGTTGGGTGCGCTaGTCCCCGGCACTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARGCWVR*SPALVA Trigger: TGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCC...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| 3UTR CAA 72 bp | TCCCTTTTTATGTTGGGAAGGTTGGCTGGACAGGAGTaGCTGATGGTAAGGCCTGGCGGTGGCAGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFMLGRLAGQE*LMVRPGGGRPW Trigger: CCAGGGCCTGCCACCGCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAACATAAAAAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTCAAGAACTGGTTCTTGCTTGATGATCCGATTCACCAGATCAGGCGAGCAGGCTGTTGGGTGCGCTaGTCCCCGGCACTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLKNWFLLDDPIHQIRRAGCWVR*SPALVA Trigger: TGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCC...TGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCGCTGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARAACSF*CCSLRS Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCAGC...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGGCTGTTGGGTGCGCTaGTCCCCGGCACTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKGCWVR*SPALVA Trigger: TGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTCATAGGGCTGTTGGGTaGGCTGCTCCCCGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHAHRAVG*AAPRHW Trigger: CCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATG...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGCTCCCTGCGCTCCTaGTCCTGCATCTGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARCSLRS*SCICSR Trigger: GCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTCCGGCACTGGTGGCATaGCATGGTCGCCAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHAPALVA*HGRQAG Trigger: ACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGG...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCGGTAAGGCCTGGCGGTaGCAGGCCCTGGTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARGKAWR*QALVAV Trigger: TACAGCAACCAGGGCCTGCCACCGCCAGGCCTTACC...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATGGTGGCAAGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSSCVLGGRCLESPWWQVGKVG*TGVADG Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...TTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 72 bp | CTTCTGCGCTCATACTGCTCCTCCGGCTGCTTGTTTTaGAAGCTCCTGGCGACACTGATGACAGCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRSYCSSGCLF*KLLATLMTAVG Trigger: ACCCACTGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTGGCTGTTGGGTGCGCTaGTCCCCGGCACTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLGCWVR*SPALVA Trigger: TGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCC...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGGCTGTTGGGTGCGCTaGTCCCCGGCACTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLGCWVR*SPALVA Trigger: TGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCC...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACCATAGGGCTGTTGGGTaGGCTGCTCCCCGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHHRAVG*AAPRHW Trigger: CCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATG...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTTGCAGCTTCTGCTGCTaGTCCCTGCGCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHACSFCC*SLRSCS Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCA...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGCTCCCCGGCACTGGTaGCATGGCATGGTCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLAPRHW*HGMVAR Trigger: CCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGC...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTGCTGCTCCCCGGCACTaGTGGCATGGCATGGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLAAPRH*WHGMVA Trigger: GGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGC...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGCTGATGGTAAGGCCTaGCGGTGGCAGGCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHAADGKA*RWQALV Trigger: AACCAGGGCCTGCCACCGCCAGGCCTTACCATCAGC...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR CAA 72 bp | CCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTGCTaGTTTTTGAAGCTCCTGGCGACACTGATGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLLRSYCSSGC*FLKLLATLMTA Trigger: TGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCCCACTCTCTGTTGCATaGACTGGGCTGCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARPLSVA*TGLPAA Trigger: AGCTGCAGGCAGCCCAGTTCATGCAACAGAGAGTGG...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTCATAGGGCTGTTGGGTaGGCTGCTCCCCGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLHRAVG*AAPRHW Trigger: CCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATG...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGCATAGGGCTGTTGGGTaGGCTGCTCCCCGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLHRAVG*AAPRHW Trigger: CCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATG...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCACGGCCACTCTCTGTTaGATGAACTGGGCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARTATLC*MNWAAC Trigger: GCAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGT...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCACTGGTGGCATGGCATaGTCGCCAGGCTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARTGGMA*SPGWFG Trigger: TCCAAACCAGCCTGGCGACCATGCCATGCCACCAGT...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGGCCGGATCCATCAAGCCCAAAATTTCTTCATTATAACTTGATTCCAGGCCCGGCACTGGTGGCATaGCATGGTCGCCAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARPDPSSPKFLHYNLIPGPALVA*HGRQAG Trigger: ACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGG...GCCTGGAATCAAGTTATAATGAAGAAATTTTGGGCTTGATGGATCCGGCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACACCGGCACTGGTGGCATaGCATGGTCGCCAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTPALVA*HGRQAG Trigger: ACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGG...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCGCTCCCCGGCACTGGTaGCATGGCATGGTCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPAPRHW*HGMVAR Trigger: CCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGC...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGCTCCCCGGCACTGGTaGCATGGCATGGTCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILAPRHW*HGMVAR Trigger: CCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAGCTCCCCGGCACTGGTaGCATGGCATGGTCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKAPRHW*HGMVAR Trigger: CCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGC...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAGCTGCTCCCCGGCACTaGTGGCATGGCATGGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKAAPRH*WHGMVA Trigger: GGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGC...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTGCTGCTCCCCGGCACTaGTGGCATGGCATGGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCAAPRH*WHGMVA Trigger: GGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGC...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGGTAAGGCCTGGCGGTaGCAGGCCCTGGTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKGKAWR*QALVAV Trigger: TACAGCAACCAGGGCCTGCCACCGCCAGGCCTTACC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGCTGATGGTAAGGCCTaGCGGTGGCAGGCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKADGKA*RWQALV Trigger: AACCAGGGCCTGCCACCGCCAGGCCTTACCATCAGC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTACTTCCATCGGCACCTaGGTGGCAGAGGGAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHATSIGT*VAEGRV Trigger: CACCCTTCCCTCTGCCACCCAGGTGCCGATGGAAGT...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTCTGGTTTGGACATGGTaGGCTCAGGACTTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHALVWTW*AQDLAG Trigger: GCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAG...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGGGTGGTGGGCACGCTaGCGTTTATGGCTGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKGWWAR*RLWLVS Trigger: AGACACCAGCCATAAACGTCAGCGTGCCCACCACCC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCCATAGGGCTGTTGGGTaGGCTGCTCCCCGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPHRAVG*AAPRHW Trigger: CCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATG...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGCTCCCTGCGCTCCTaGTCCTGCATCTGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLCSLRS*SCICSR Trigger: GCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTGCTGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPAACSF*CCSLRS Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCAGC...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTTGGAGGCCCCAGAATaGTCTGCAGAACTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARLEAPE*SAELLW Trigger: CCACAGCAGTTCTGCAGAGCATTCTGGGGCCTCCAA...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113339.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAACCGGCACTGGTGGCATaGCATGGTCGCCAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKPALVA*HGRQAG Trigger: ACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGG...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGCTGCTCCCCGGCACTaGTGGCATGGCATGGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLAAPRH*WHGMVA Trigger: GGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGC...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGGGTAAGGCCTGGCGGTaGCAGGCCCTGGTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLGKAWR*QALVAV Trigger: TACAGCAACCAGGGCCTGCCACCGCCAGGCCTTACC...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGAGCCCATCTTCCTaGGGATGCTGTAGGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLWSPSS*GCCRPG Trigger: GCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCA...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGACTTCCATCGGCACCTaGGTGGCAGAGGGAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKTSIGT*VAEGRV Trigger: CACCCTTCCCTCTGCCACCCAGGTGCCGATGGAAGT...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | TCCGTTTCTTCTGCGCTCATACTGCTCCTCCGGCTGCTTGTTTTTGAAGCTCCTTTTACCTGGTGCCTCTaGGCTTGCTGTATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSALILLLRLLVFEAPFTWCL*ACCMWY Trigger: GTACCACATACAGCAAGCTCAGAGGCACCAGGTAAA...AGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACCTGGTTTGGACATGGTaGGCTCAGGACTTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHLVWTW*AQDLAG Trigger: GCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAG...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGGTGACTCCAACAGGTaGGAGGGCATCGTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKGDSNR*EGIVHQ Trigger: CTGATGGACGATGCCCTCTCACCTGTTGGAGTCACC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGGTGACTCCAACAGGTaGGAGGGCATCGTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHGDSNR*EGIVHQ Trigger: CTGATGGACGATGCCCTCTCACCTGTTGGAGTCACC...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGCATCTGCTCACGCATaGGTTGCTGGCGTAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHAASAHA*VAGVAR Trigger: TCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGC...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | GTTACAGTTCAGTCAGTGCTGGTCCAAAAGAGACTGCTGAGATTTTTAAGGCACGGGTGGTGGGCACGCTaGCGTTTATGGCTGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTVQSVLVQKRLLRFLRHGWWAR*RLWLVS Trigger: AGACACCAGCCATAAACGTCAGCGTGCCCACCACCC...GTGCCTTAAAAATCTCAGCAGTCTCTTTTGGACCAGCACTGACTGAACTGTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTCATAGGGCTGTTGGGTaGGCTGCTCCCCGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTHRAVG*AAPRHW Trigger: CCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATG...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGCCATCTTCCTGGGGATaGTGTAGGCCGGGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLPSSWG*CRPGCS Trigger: AGAGCAGCCCGGCCTACAGCATCCCCAGGAAGATGG...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGCCATCTTCCTGGGGATaGTGTAGGCCGGGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLPSSWG*CRPGCS Trigger: AGAGCAGCCCGGCCTACAGCATCCCCAGGAAGATGG...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAATGCTCCCTGCGCTCCTaGTCCTGCATCTGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKCSLRS*SCICSR Trigger: GCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTTGCTCCCTGCGCTCCTaGTCCTGCATCTGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILCSLRS*SCICSR Trigger: GCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTTGCAGCTTCTGCTGCTaGTCCCTGCGCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLCSFCC*SLRSCS Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCA...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTTGCAGCTTCTGCTGCTaGTCCCTGCGCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCCSFCC*SLRSCS Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCA...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGGTGATGGTACCGTCCGTGAGATCCAGAGTTGTCGTACATGTCAGGTCGTATGTGGTACTTGGTaGGGTTTTCCAGGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKGDGTVREIQSCRTCQVVCGTW*GFPGGS Trigger: AGACCCACCTGGAAAACCCCACCAAGTACCACATAC...GACCTGACATGTACGACAACTCTGGATCTCACGGACGGTACCATCACCTTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTCCGGCACTGGTGGCATaGCATGGTCGCCAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTPALVA*HGRQAG Trigger: ACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGG...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCTAGCTCCTTAATGCGGTCGTTTATGTTAAATCTTCTTCTTCGTTCAATCAAGGCTCCCCGGCACTGGTaGCATGGCATGGTCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSLMRSFMLNLLLRSIKAPRHW*HGMVAR Trigger: CCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGC...CTTGATTGAACGAAGAAGAAGATTTAACATAAACGACCGCATTAAGGAGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGGTAAGGCCTGGCGGTaGCAGGCCCTGGTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILGKAWR*QALVAV Trigger: TACAGCAACCAGGGCCTGCCACCGCCAGGCCTTACC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCGGTAAGGCCTGGCGGTaGCAGGCCCTGGTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPGKAWR*QALVAV Trigger: TACAGCAACCAGGGCCTGCCACCGCCAGGCCTTACC...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAGCTGATGGTAAGGCCTaGCGGTGGCAGGCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKADGKA*RWQALV Trigger: AACCAGGGCCTGCCACCGCCAGGCCTTACCATCAGC...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTGCTGATGGTAAGGCCTaGCGGTGGCAGGCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPADGKA*RWQALV Trigger: AACCAGGGCCTGCCACCGCCAGGCCTTACCATCAGC...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGCTGATGGTAAGGCCTaGCGGTGGCAGGCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILADGKA*RWQALV Trigger: AACCAGGGCCTGCCACCGCCAGGCCTTACCATCAGC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTTGGAGCCCATCTTCCTaGGGATGCTGTAGGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILWSPSS*GCCRPG Trigger: GCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCA...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTTGGAGCCCATCTTCCTaGGGATGCTGTAGGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCWSPSS*GCCRPG Trigger: GCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCA...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTCTCTGTTGCATGAACTaGGCTGCCTGCAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHALCCMN*AACSFC Trigger: GCAGAAGCTGCAGGCAGCCCAGTTCATGCAACAGAG...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR CAA 72 bp | GTTCCCTTGTTCCACCGCATGTCTGGATCATTTGACTaGGGGATCAGAGTACCTAGCTCCTTAATGCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPLFHRMSGSFD*GIRVPSSLMRS Trigger: CGACCGCATTAAGGAGCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGACATGCGGTGGAACAAGGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR CAA 72 bp | CAGCTTCTTCTGTCGGTTTTCAAGGTCCTTAGCTCGTaGCTGTTCCCGTTGCAACTTCCGGATGTAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLLSVFKVLSS*LFPLQLPDVVH Trigger: GTGGACTACATCCGGAAGTTGCAACGGGAACAGCAACGAGCTAAGGACCTTGAAAACCGACAGAAGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGCTGGTTTGGACATGGTaGGCTCAGGACTTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLLVWTW*AQDLAG Trigger: GCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAG...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTGGTGACTCCAACAGGTaGGAGGGCATCGTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLGDSNR*EGIVHQ Trigger: CTGATGGACGATGCCCTCTCACCTGTTGGAGTCACC...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTGGGTGGTGGGCACGCTaGCGTTTATGGCTGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLGWWAR*RLWLVS Trigger: AGACACCAGCCATAAACGTCAGCGTGCCCACCACCC...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGAGGTGCCGGTTCGCATaGTCCAGCTTCTTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLRCRFA*SSFFCR Trigger: CCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCT...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTCCATCTTCCTGGGGATaGTGTAGGCCGGGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCPSSWG*CRPGCS Trigger: AGAGCAGCCCGGCCTACAGCATCCCCAGGAAGATGG...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCCCATCTTCCTGGGGATaGTGTAGGCCGGGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPPSSWG*CRPGCS Trigger: AGAGCAGCCCGGCCTACAGCATCCCCAGGAAGATGG...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTGCAGCTTCTGCTGCTaGTCCCTGCGCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTCSFCC*SLRSCS Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACTTGCATGAACTGGGCTaGCTGCAGCTTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHLHELG*LQLLLL Trigger: CAGCAGCAGAAGCTGCAGGCAGCCCAGTTCATGCAA...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGACGGCCACTCTCTGTTaGATGAACTGGGCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLTATLC*MNWAAC Trigger: GCAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGT...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAGCATGGTCGCCAGGCTaGTTTGGACATGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTAWSPG*FGHGEL Trigger: GAGCTCACCATGTCCAAACCAGCCTGGCGACCATGC...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTGCATGGTCGCCAGGCTaGTTTGGACATGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLAWSPG*FGHGEL Trigger: GAGCTCACCATGTCCAAACCAGCCTGGCGACCATGC...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGTGCGTGTTCATACCTaGGCACTCACTCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHVRVHT*ALTLCP Trigger: AGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCAC...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTGGAGCCCATCTTCCTaGGGATGCTGTAGGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTWSPSS*GCCRPG Trigger: GCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGAGCTTAACGGAGGCTTaGAGGCCCCAGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKSLTEA*RPQNAL Trigger: CAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCT...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGCTGACGTTTATGGCTaGTGTCTGACTCACGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKADVYG*CLTHGH Trigger: GTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCACTTCCATCGGCACCTaGGTGGCAGAGGGAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPTSIGT*VAEGRV Trigger: CACCCTTCCCTCTGCCACCCAGGTGCCGATGGAAGT...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAACTTCCATCGGCACCTaGGTGGCAGAGGGAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKTSIGT*VAEGRV Trigger: CACCCTTCCCTCTGCCACCCAGGTGCCGATGGAAGT...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR CAA 72 bp | AGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCTTGCTaGATGATCCGATTCACCAGATCAGGCGAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSWLQFSRTGSC*MIRFTRSGEQR Trigger: TCTCTGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR TCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCTGGTTTGGACATGGTaGGCTCAGGACTTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILLVWTW*AQDLAG Trigger: GCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAG...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGACTGGTTTGGACATGGTaGGCTCAGGACTTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGLVWTW*AQDLAG Trigger: GCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAG...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTGGTGACTCCAACAGGTaGGAGGGCATCGTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSGDSNR*EGIVHQ Trigger: CTGATGGACGATGCCCTCTCACCTGTTGGAGTCACC...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGTGACTCCAACAGGTaGGAGGGCATCGTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGGDSNR*EGIVHQ Trigger: CTGATGGACGATGCCCTCTCACCTGTTGGAGTCACC...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTCCACTCTCTGTTGCATaGACTGGGCTGCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLPLSVA*TGLPAA Trigger: AGCTGCAGGCAGCCCAGTTCATGCAACAGAGAGTGG...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTCCACTCTCTGTTGCATaGACTGGGCTGCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCPLSVA*TGLPAA Trigger: AGCTGCAGGCAGCCCAGTTCATGCAACAGAGAGTGG...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTCCACTCTCTGTTGCATaGACTGGGCTGCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSPLSVA*TGLPAA Trigger: AGCTGCAGGCAGCCCAGTTCATGCAACAGAGAGTGG...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACTTTATGGCTGGTGTCTaGCTCACGGCCACTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHFMAGV*LTATLC Trigger: ACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAA...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGGCACTCACTCTCTaGCCTGCTCTGCTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLWALTL*PALLLK Trigger: TTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCA...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAAGGTGCCGGTTCGCATaGTCCAGCTTCTTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKRCRFA*SSFFCR Trigger: CCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCT...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGGTGCCGGTTCGCATaGTCCAGCTTCTTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCRCRFA*SSFFCR Trigger: CCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCT...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTAGGTGCCGGTTCGCATaGTCCAGCTTCTTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLRCRFA*SSFFCR Trigger: CCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCT...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGAGGTGCCGGTTCGCATaGTCCAGCTTCTTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILRCRFA*SSFFCR Trigger: CCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCT...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTCGTACATGTCAGGTCTaGCTGGTGCTGTACAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHARTCQV*LVLYKF Trigger: GAACTTGTACAGCACCAGGCAGACCTGACATGTACG...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGATGCTCCGTTTCTTCTaGGCTCATACTGCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKMLRFF*AHTAPP Trigger: CGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCAT...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAGGCCCCAGAATGCTCTaGAGAACTGCTGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTGPRML*RTAALQ Trigger: CTGAAGAGCAGCAGTTCTGCAGAGCATTCTGGGGCC...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACTGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHCSRMS*WRSKMR Trigger: ACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCA...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGTGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKCSRMS*WRSKMR Trigger: ACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCA...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGTCCTGCTCCTGCATCTaGTCACGCATGAGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLSCSCI*SRMSCW Trigger: CCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGA...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTGCTGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSAACSF*CCSLRS Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCAGC...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR GCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTGCTGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFAACSF*CCSLRS Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCAGC...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR GCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCACGGCCACTCTCTGTTaGATGAACTGGGCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPTATLC*MNWAAC Trigger: GCAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGT...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR GCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGACGGCCACTCTCTGTTaGATGAACTGGGCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILTATLC*MNWAAC Trigger: GCAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGT...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR GCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGGCCCCAGAATGCTCTaGAGAACTGAGACACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKGPRML*RTETQA Trigger: AGCTTGTGTCTCAGTTCTGCAGAGCATTCTGGGGCC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101123.10 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGCTGTATGTGGTACTTaGTGGGGTTTTCCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKAVCGT*WGFPGG Trigger: CCCACCTGGAAAACCCCACCAAGTACCACATACAGC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGTATGTGGTACTTaGTGGGGTTTTCCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHAVCGT*WGFPGG Trigger: CCCACCTGGAAAACCCCACCAAGTACCACATACAGC...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAGCATGGTCGCCAGGCTaGTTTGGACATGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKAWSPG*FGHGEL Trigger: GAGCTCACCATGTCCAAACCAGCCTGGCGACCATGC...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGCATGGTCGCCAGGCTaGTTTGGACATGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILAWSPG*FGHGEL Trigger: GAGCTCACCATGTCCAAACCAGCCTGGCGACCATGC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTACTGGTGGCATGGCATaGTCGCCAGGCTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCTGGMA*SPGWFG Trigger: TCCAAACCAGCCTGGCGACCATGCCATGCCACCAGT...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAACTGGTGGCATGGCATaGTCGCCAGGCTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKTGGMA*SPGWFG Trigger: TCCAAACCAGCCTGGCGACCATGCCATGCCACCAGT...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCGGCACTGGTGGCATaGCATGGTCGCCAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFPALVA*HGRQAG Trigger: ACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGG...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGGTGCGTGTTCATACCTaGGCACTCACTCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLVRVHT*ALTLCP Trigger: AGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCAC...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGCAGAGACCGGTGGATaGGATAAGGGAAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKAETGG*DKGKSM Trigger: CATGGACTTTCCCTTATCCCATCCACCGGTCTCTGC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGAGCTTAACGGAGGCTTaGAGGCCCCAGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLSLTEA*RPQNAL Trigger: CAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCT...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAAGCTTAACGGAGGCTTaGAGGCCCCAGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTSLTEA*RPQNAL Trigger: CAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCT...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHASRMSC*RSKMRD Trigger: ATCACGCATCTTGCTACGCCAGCAACTCATGCGTGA...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTCTCTGTTGCATGAACTaGGCTGCCTGCAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLLCCMN*AACSFC Trigger: GCAGAAGCTGCAGGCAGCCCAGTTCATGCAACAGAG...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGGCTGACGTTTATGGCTaGTGTCTGACTCACGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLADVYG*CLTHGH Trigger: GTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGC...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| 3UTR CAA 72 bp | GATTTGCATTACCCAACATGCATGGGAACCGCGCACTaGACGAATCTCACCAAGGCCATCCATTCATACATC | + |
|
Preference number: 4 (lower is better) Translates to: DLHYPTCMGTAH*TNLTKAIHSYI Trigger: GATGTATGAATGGATGGCCTTGGTGAGATTCGTCAAGTGCGCGGTTCCCATGCATGTTGGGTAATGCAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 72 bp | AGAGGTCGATCAAGTTTCCAGAGACGGGTAACGTATTaGCCATTTGCAAGGCCGGATCCATCAAGCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGRSSFQRRVTY*PFARPDPSSPK Trigger: TTTTGGGCTTGATGGATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCTCTGGAAACTTGATCGACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| 3UTR CAA 72 bp | TACAAGTTCCTGGCTGCAGTTCTCAAGAACTGGTTCTaGCTTGATGATCCGATTCACCAGATCAGGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YKFLAAVLKNWF*LDDPIHQIRRA Trigger: TGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR TCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTACTGGTTTGGACATGGTaGGCTCAGGACTTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLLVWTW*AQDLAG Trigger: GCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAG...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGGTTTTGGGTTCTTCGTaGAACTCCTCCCCGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLVLGSS*NSSPTS Trigger: CGAAGTCGGGGAGGAGTTTCACGAAGAACCCAAAAC...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTGCATCTGCTCACGCATaGGTTGCTGGCGTAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLASAHA*VAGVAR Trigger: TCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGC...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR TCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAGCATCTGCTCACGCATaGGTTGCTGGCGTAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKASAHA*VAGVAR Trigger: TCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGC...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTGCATCTGCTCACGCATaGGTTGCTGGCGTAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCASAHA*VAGVAR Trigger: TCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGC...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTTCTCAAGAACTGGTTCTTGCTTGATGATCCGATTCACCAGATCAGGCGAACTCACTCTCTGCCCTaGTCTGCTCCTCAAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AVLKNWFLLDDPIHQIRRTHSLP*SAPQTY Trigger: ATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGT...TCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTTGGGCACTCACTCTCTaGCCTGCTCTGCTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCWALTL*PALLLK Trigger: TTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCA...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTTGGGCACTCACTCTCTaGCCTGCTCTGCTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSWALTL*PALLLK Trigger: TTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCA...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTTGGGCACTCACTCTCTaGCCTGCTCTGCTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILWALTL*PALLLK Trigger: TTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCA...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTGGGCACTCACTCTCTaGCCTGCTCTGCTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILWALTL*PALLLK Trigger: TTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCA...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCCCTCTCTTTAGCCAATaGTCTTGCTTCAGACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARPLFSQ*SCFRLC Trigger: ACAGAGTCTGAAGCAAGAGCATTGGCTAAAGAGAGG...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCCATGCGCTCTAGCCTaGATCTCCAGCTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILPCALA*ISSSCT Trigger: AGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGG...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTCCATGCGCTCTAGCCTaGATCTCCAGCTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCPCALA*ISSSCT Trigger: AGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGG...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGACCATGCGCTCTAGCCTaGATCTCCAGCTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGPCALA*ISSSCT Trigger: AGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGG...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAACCATGCGCTCTAGCCTaGATCTCCAGCTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKPCALA*ISSSCT Trigger: AGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGG...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTATGCTCCGTTTCTTCTaGGCTCATACTGCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLMLRFF*AHTAPP Trigger: CGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCAT...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCGGCCCCAGAATGCTCTaGAGAACTGCTGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPGPRML*RTAALQ Trigger: CTGAAGAGCAGCAGTTCTGCAGAGCATTCTGGGGCC...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTCCTGCTCCTGCATCTaGTCACGCATGAGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPSCSCI*SRMSCW Trigger: CCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGA...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTTCCTGCTCCTGCATCTaGTCACGCATGAGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILSCSCI*SRMSCW Trigger: CCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGA...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTTGCATGAACTGGGCTaGCTGCAGCTTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPLHELG*LQLLLL Trigger: CAGCAGCAGAAGCTGCAGGCAGCCCAGTTCATGCAA...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTATGTGGTACTTGGTaGGGTTTTCCAGGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKVCGTW*GFPGGS Trigger: AGACCCACCTGGAAAACCCCACCAAGTACCACATAC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGCAAAAACACTGCGTCTTGGCTTAACCAGTCCCTGAAAGAATCCACAGTATGTGGTACTTGGTaGGGTTTTCCAGGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSKNTASWLNQSLKESTVCGTW*GFPGGS Trigger: AGACCCACCTGGAAAACCCCACCAAGTACCACATAC...TGTGGATTCTTTCAGGGACTGGTTAAGCCAAGACGCAGTGTTTTTGCTCACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGTATGTGGTACTTGGTaGGGTTTTCCAGGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHVCGTW*GFPGGS Trigger: AGACCCACCTGGAAAACCCCACCAAGTACCACATAC...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGGCCGGATCCATCAAGCCCAAAATTTCTTCATTATAACTTGATTCCAGGCGCTGTATGTGGTACTTaGTGGGGTTTTCCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARPDPSSPKFLHYNLIPGAVCGT*WGFPGG Trigger: CCCACCTGGAAAACCCCACCAAGTACCACATACAGC...GCCTGGAATCAAGTTATAATGAAGAAATTTTGGGCTTGATGGATCCGGCCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR CCA 90 bp | CACCGCATGTCTGGATCATTTGACTTGGGGATCAGAGTACCTAGCTCCTTAATGGGTGAGCTCAGGACTTaGCTGGCATGTTTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRMSGSFDLGIRVPSSLMGELRT*LACLFA Trigger: AGCAAATAAACATGCCAGCCAAGTCCTGAGCTCACC...CATTAAGGAGCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGACATGCGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
||
| CDS-3UTR CCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGCATGGTCGCCAGGCTaGTTTGGACATGGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLAWSPG*FGHGEL Trigger: GAGCTCACCATGTCCAAACCAGCCTGGCGACCATGC...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAACTGGTGGCATGGCATaGTCGCCAGGCTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLTGGMA*SPGWFG Trigger: TCCAAACCAGCCTGGCGACCATGCCATGCCACCAGT...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGTGCGTGTTCATACCTaGGCACTCACTCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILVRVHT*ALTLCP Trigger: AGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCAC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTVGKVG*TGVADG Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTGCAGAGACCGGTGGATaGGATAAGGGAAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLAETGG*DKGKSM Trigger: CATGGACTTTCCCTTATCCCATCCACCGGTCTCTGC...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCGCAGTTCTCAAGAACTaGTTCTTGCTTGATGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARAVLKN*FLLDDP Trigger: CGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGC...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGCTGTACAAGTTCCTaGCTGCAGTTCTCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PLAQKAHTWRNQFTDTARCCTSS*LQFSRT Trigger: AGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCA...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGGGATGTCTTCCAAGTTaGAGCCCATCTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLGCLPS*SPSSWG Trigger: TCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCC...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTCTGTTGCATGAACTaGGCTGCCTGCAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPLCCMN*AACSFC Trigger: GCAGAAGCTGCAGGCAGCCCAGTTCATGCAACAGAG...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCTCTGTTGCATGAACTaGGCTGCCTGCAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILLCCMN*AACSFC Trigger: GCAGAAGCTGCAGGCAGCCCAGTTCATGCAACAGAG...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTGCTGACGTTTATGGCTaGTGTCTGACTCACGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILADVYG*CLTHGH Trigger: GTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGC...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGTGGGGTTTTCCAGGTaGGTCTGCACCTTAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLVGFSR*VCTLRT Trigger: AGTCCTTAAGGTGCAGACCCACCTGGAAAACCCCAC...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACATTTACCTGGTGCCTCTaGGCTTGCTGTATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTFTWCL*ACCMWY Trigger: GTACCACATACAGCAAGCTCAGAGGCACCAGGTAAA...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGATTTATGGCTGGTGTCTaGCTCACGGCCACTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGFMAGV*LTATLC Trigger: ACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAA...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTTTTATGGCTGGTGTCTaGCTCACGGCCACTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPFMAGV*LTATLC Trigger: ACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAA...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTGGGCACTCACTCTCTaGCCTGCTCTGCTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTWALTL*PALLLK Trigger: TTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACACGTACATGTCAGGTCTaGCTGGTGCTGTACAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTRTCQV*LVLYKF Trigger: GAACTTGTACAGCACCAGGCAGACCTGACATGTACG...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GTTACAGTTCAGTCAGTGCTGGTCCAAAAGAGACTGCTGAGATTTTTAAGGCACTACTGCTCCTCCGGCTaGTTGTTTTTGAAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTVQSVLVQKRLLRFLRHYCSSG*LFLKLL Trigger: CAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTA...GTGCCTTAAAAATCTCAGCAGTCTCTTTTGGACCAGCACTGACTGAACTGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR GCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCTTCTGCGCTCATACTaGTCCTCCGGCTGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILLLRSY*SSGCLF Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAG...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGACTTCTGCGCTCATACTaGTCCTCCGGCTGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGLLRSY*SSGCLF Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAG...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTCTTCTGCGCTCATACTaGTCCTCCGGCTGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSLLRSY*SSGCLF Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAG...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCATGCTCCGTTTCTTCTaGGCTCATACTGCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPMLRFF*AHTAPP Trigger: CGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCAT...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTATGCTCCGTTTCTTCTaGGCTCATACTGCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLMLRFF*AHTAPP Trigger: CGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCAT...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTATGCTCCGTTTCTTCTaGGCTCATACTGCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCMLRFF*AHTAPP Trigger: CGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCAT...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGCTCTGCAGAACTGCTaGTCTTCAGAGGTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKALQNC*SSEVDF Trigger: AAAGTCAACCTCTGAAGAGCAGCAGTTCTGCAGAGC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTTGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSCSRMS*WRSKMR Trigger: ACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCA...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTATTGCATGAACTGGGCTaGCTGCAGCTTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLLHELG*LQLLLL Trigger: CAGCAGCAGAAGCTGCAGGCAGCCCAGTTCATGCAA...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTGCTGTATGTGGTACTTaGTGGGGTTTTCCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILAVCGT*WGFPGG Trigger: CCCACCTGGAAAACCCCACCAAGTACCACATACAGC...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCGCTGTATGTGGTACTTaGTGGGGTTTTCCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPAVCGT*WGFPGG Trigger: CCCACCTGGAAAACCCCACCAAGTACCACATACAGC...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGGTGAGCTCAGGACTTaGCTGGCATGTTTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKGELRT*LACLFA Trigger: AGCAAATAAACATGCCAGCCAAGTCCTGAGCTCACC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTGCGTGTTCATACCTaGGCACTCACTCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTVRVHT*ALTLCP Trigger: AGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCAC...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSVGKVG*TGVADG Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKVGKVG*TGVADG Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCVGKVG*TGVADG Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLAPFLC*EGWLDR Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTGCAGAGACCGGTGGATaGGATAAGGGAAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILAETGG*DKGKSM Trigger: CATGGACTTTCCCTTATCCCATCCACCGGTCTCTGC...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTGCAGAGACCGGTGGATaGGATAAGGGAAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSAETGG*DKGKSM Trigger: CATGGACTTTCCCTTATCCCATCCACCGGTCTCTGC...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS-3UTR CCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTGGATGTCTTCCAAGTTaGAGCCCATCTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPGCLPS*SPSSWG Trigger: TCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCC...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS-3UTR CCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCGGATGTCTTCCAAGTTaGAGCCCATCTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPGCLPS*SPSSWG Trigger: TCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCC...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGATGTCTTCCAAGTTaGAGCCCATCTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGGCLPS*SPSSWG Trigger: TCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCC...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAGGATGTCTTCCAAGTTaGAGCCCATCTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKGCLPS*SPSSWG Trigger: TCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCC...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTGTGGGGTTTTCCAGGTaGGTCTGCACCTTAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILVGFSR*VCTLRT Trigger: AGTCCTTAAGGTGCAGACCCACCTGGAAAACCCCAC...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGTGGGGTTTTCCAGGTaGGTCTGCACCTTAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILVGFSR*VCTLRT Trigger: AGTCCTTAAGGTGCAGACCCACCTGGAAAACCCCAC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| 3UTR CAA 72 bp | ATAAAACCATTCCCTATGTTGTCACCTCTAAATTGCTaGCCTGCCTCTCCCAGCAGCTGTGTCTTAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKPFPMLSPLNC*PASPSSCVLGG Trigger: TCCTCCTAAGACACAGCTGCTGGGAGAGGCAGGCAAGCAATTTAGAGGTGACAACATAGGGAATGGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| CDS-3UTR TCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAATTTACCTGGTGCCTCTaGGCTTGCTGTATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKFTWCL*ACCMWY Trigger: GTACCACATACAGCAAGCTCAGAGGCACCAGGTAAA...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR TCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTTTACCTGGTGCCTCTaGGCTTGCTGTATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILFTWCL*ACCMWY Trigger: GTACCACATACAGCAAGCTCAGAGGCACCAGGTAAA...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR TCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTTTTACCTGGTGCCTCTaGGCTTGCTGTATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCFTWCL*ACCMWY Trigger: GTACCACATACAGCAAGCTCAGAGGCACCAGGTAAA...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR TCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTTTTGGGTTCTTCGTaGAACTCCTCCCCGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTVLGSS*NSSPTS Trigger: CGAAGTCGGGGAGGAGTTTCACGAAGAACCCAAAAC...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTACTCACTCTCTGCCCTaGTCTGCTCCTCAAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLTHSLP*SAPQTY Trigger: ATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGT...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR GCA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACTTTAGCCAATGCTCTTaGTTCAGACTCTGTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPLLRKLTLGEISSQILHFSQCS*FRLCGE Trigger: TTCCCCACAGAGTCTGAAGCAAGAGCATTGGCTAAA...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGCAAAAACACTGCGTCTTGGCTTAACCAGTCCCTGAAAGAATCCACACCTCTCTTTAGCCAATaGTCTTGCTTCAGACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVSKNTASWLNQSLKESTPLFSQ*SCFRLC Trigger: ACAGAGTCTGAAGCAAGAGCATTGGCTAAAGAGAGG...TGTGGATTCTTTCAGGGACTGGTTAAGCCAAGACGCAGTGTTTTTGCTCACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR GCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTATAAGGGAAAGTCCATaGGCTCTAGCCTGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILIRESP*ALACIS Trigger: GGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTAT...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGATAAGGGAAAGTCCATaGGCTCTAGCCTGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILIRESP*ALACIS Trigger: GGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTAT...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTATAAGGGAAAGTCCATaGGCTCTAGCCTGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSIRESP*ALACIS Trigger: GGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTAT...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTATAAGGGAAAGTCCATaGGCTCTAGCCTGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPIRESP*ALACIS Trigger: GGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTAT...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTCGTACATGTCAGGTCTaGCTGGTGCTGTACAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSRTCQV*LVLYKF Trigger: GAACTTGTACAGCACCAGGCAGACCTGACATGTACG...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTTACTGCTCCTCCGGCTaGTTGTTTTTGAAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLYCSSG*LFLKLL Trigger: CAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTA...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGATACTGCTCCTCCGGCTaGTTGTTTTTGAAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGYCSSG*LFLKLL Trigger: CAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTA...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAATACTGCTCCTCCGGCTaGTTGTTTTTGAAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKYCSSG*LFLKLL Trigger: CAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTA...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGCTCTGCAGAACTGCTaGTCTTCAGAGGTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLALQNC*SSEVDF Trigger: AAAGTCAACCTCTGAAGAGCAGCAGTTCTGCAGAGC...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGAATGCTCTGCAGAACTaGTGCTCTTCAGAGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLNALQN*CSSEVD Trigger: GTCAACCTCTGAAGAGCAGCAGTTCTGCAGAGCATT...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTATGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLCSRMS*WRSKMR Trigger: ACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCA...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTAATGCTCTGCAGAACTaGTGTGGGGAAACCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPNALQN*CGETRR Trigger: CCTTCTGGTTTCCCCACAGCAGTTCTGCAGAGCATT...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113339.8 |
||
| CDS-3UTR CCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTACTGGTGGCATGGCATaGTCGCCAGGCTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFTGGMA*SPGWFG Trigger: TCCAAACCAGCCTGGCGACCATGCCATGCCACCAGT...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLAPFLC*EGWLDR Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILAPFLC*EGWLDR Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGAPFLC*EGWLDR Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLISKEVTDRQSSHQVFPAPFLC*EGWLDR Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILSRMSC*RSKMRD Trigger: ATCACGCATCTTGCTACGCCAGCAACTCATGCGTGA...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTGGGGTTTTCCAGGTaGGTCTGCACCTTAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTVGFSR*VCTLRT Trigger: AGTCCTTAAGGTGCAGACCCACCTGGAAAACCCCAC...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR CAA 72 bp | TACCTTACCCAGAGGCAGGTGGATAATTTTGGTATTTaGAGCACTCTAAACGGAGGTCCAACCCTGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: YLTQRQVDNFGI*STLNGGPTLRY Trigger: GTATCTCAGGGTTGGACCTCCGTTTAGAGTGCTCAAAATACCAAAATTATCCACCTGCCTCTGGGTAAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTACTCACTCTCTGCCCTaGTCTGCTCCTCAAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSTHSLP*SAPQTY Trigger: ATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGT...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTACTCACTCTCTGCCCTaGTCTGCTCCTCAAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILTHSLP*SAPQTY Trigger: ATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGT...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTACTCACTCTCTGCCCTaGTCTGCTCCTCAAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLTHSLP*SAPQTY Trigger: ATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGT...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTAACGTATTTGCCATTTaGAAGGCCGGATCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLNVFAI*KAGSIK Trigger: CTTGATGGATCCGGCCTTGCAAATGGCAAATACGTT...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGAACGTATTTGCCATTTaGAAGGCCGGATCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLNVFAI*KAGSIK Trigger: CTTGATGGATCCGGCCTTGCAAATGGCAAATACGTT...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCATGCGCTCTAGCCTaGATCTCCAGCTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFPCALA*ISSSCT Trigger: AGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGG...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTATAAGGGAAAGTCCATaGGCTCTAGCCTGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTIRESP*ALACIS Trigger: GGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTAT...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTACGTACATGTCAGGTCTaGCTGGTGCTGTACAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLRTCQV*LVLYKF Trigger: GAACTTGTACAGCACCAGGCAGACCTGACATGTACG...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTCGTACATGTCAGGTCTaGCTGGTGCTGTACAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTRTCQV*LVLYKF Trigger: GAACTTGTACAGCACCAGGCAGACCTGACATGTACG...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAATGCTCTGCAGAACTaGTGCTCTTCAGAGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILNALQN*CSSEVD Trigger: GTCAACCTCTGAAGAGCAGCAGTTCTGCAGAGCATT...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTTTGGAGGCCCCAGAATaGTCTGCAGAACTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSLEAPE*SAELLL Trigger: GAGCAGCAGTTCTGCAGAGCATTCTGGGGCCTCCAA...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR GCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTTTGGAGGCCCCAGAATaGTCTGCAGAACTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFLEAPE*SAELLL Trigger: GAGCAGCAGTTCTGCAGAGCATTCTGGGGCCTCCAA...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTTCCTGCTCCTGCATCTaGTCACGCATGAGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSSCSCI*SRMSCW Trigger: CCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGA...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR GCA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTTTGCATGAACTGGGCTaGCTGCAGCTTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSLHELG*LQLLLL Trigger: CAGCAGCAGAAGCTGCAGGCAGCCCAGTTCATGCAA...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTATGTGGTACTTGGTaGGGTTTTCCAGGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTVCGTW*GFPGGS Trigger: AGACCCACCTGGAAAACCCCACCAAGTACCACATAC...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTGGTGAGCTCAGGACTTaGCTGGCATGTTTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSGELRT*LACLFA Trigger: AGCAAATAAACATGCCAGCCAAGTCCTGAGCTCACC...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTGGTGAGCTCAGGACTTaGCTGGCATGTTTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILGELRT*LACLFA Trigger: AGCAAATAAACATGCCAGCCAAGTCCTGAGCTCACC...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TATTCTAGGAAAAGAGTCACACACTTAAGGGAGTTGAAAGAATGGGAACTTATTACTGGTGGCATGGCATaGTCGCCAGGCTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSRKRVTHLRELKEWELITGGMA*SPGWFG Trigger: TCCAAACCAGCCTGGCGACCATGCCATGCCACCAGT...AATAAGTTCCCATTCTTTCAACTCCCTTAAGTGTGTGACTCTTTTCCTAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACACTGGATCATTTGACTTaGGGATCAGAGTACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTLDHLT*GSEYLA Trigger: AGCTAGGTACTCTGATCCCCAAGTCAAATGATCCAG...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGCTGGATCATTTGACTTaGGGATCAGAGTACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EISSQILHAEGTILRRPLLDHLT*GSEYLA Trigger: AGCTAGGTACTCTGATCCCCAAGTCAAATGATCCAG...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTGCAGTTCTCAAGAACTaGTTCTTGCTTGATGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLAVLKN*FLLDDP Trigger: CGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGC...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACATGCTGTACAAGTTCCTaGCTGCAGTTCTCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTCCTSS*LQFSRT Trigger: AGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCA...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTAGCTTAACGGAGGCTTaGAGGCCCCAGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFSLTEA*RPQNAL Trigger: CAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCT...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTSRMSC*RSKMRD Trigger: ATCACGCATCTTGCTACGCCAGCAACTCATGCGTGA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTGCTGACGTTTATGGCTaGTGTCTGACTCACGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFADVYG*CLTHGH Trigger: GTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGC...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| 3UTR CAA 72 bp | ACCAGGAAATTGCCGCATTTAGAAAGCGAGAAAGTCTaGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRKLPHLESEKV*DVFPTIFLPPL Trigger: AAGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATGCGGCAATTTCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 72 bp | ATAAATAAAACCATTCCCTATGTTGTCACCTCTAAATaGCTTGCCTGCCTCTCCCAGCAGCTGTGTCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: INKTIPYVVTSK*LACLSQQLCLR Trigger: CCTAAGACACAGCTGCTGGGAGAGGCAGGCAAGCAATTTAGAGGTGACAACATAGGGAATGGTTTTATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 72 bp | CAAACTGAACTGCATCATGCTCTGGGTATGACCAGATaGCTTGCACAGTTTTTGGCAAAGTCAGAAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTELHHALGMTR*LAQFLAKSEGL Trigger: CAAACCTTCTGACTTTGCCAAAAACTGTGCAAGCAATCTGGTCATACCCAGAGCATGATGCAGTTCAGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR TCA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTTTCTTCATTATAACTTaGTTCCAGGCTGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLRKLTLGEISSQILHAFFIIT*FQADDV Trigger: GACATCATCAGCCTGGAATCAAGTTATAATGAAGAA...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGGAAAATACACGCTGTaGGCTCCCTTTTTATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILGKYTL*APFLCW Trigger: CCAACATAAAAAGGGAGCTCACAGCGTGTATTTTCC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTTTGCTTCAGACTCTGTaGGCTCCCTTTTTATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCLLQTL*APFLCW Trigger: CCAACATAAAAAGGGAGCTCACAGAGTCTGAAGCAA...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAACTCACTCTCTGCCCTaGTCTGCTCCTCAAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLTHSLP*SAPQTY Trigger: ATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGT...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTAACGTATTTGCCATTTaGAAGGCCGGATCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPNVFAI*KAGSIK Trigger: CTTGATGGATCCGGCCTTGCAAATGGCAAATACGTT...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAAACGTATTTGCCATTTaGAAGGCCGGATCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKNVFAI*KAGSIK Trigger: CTTGATGGATCCGGCCTTGCAAATGGCAAATACGTT...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTTTTAGCCAATGCTCTTaGTTCAGACTCTGTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSFSQCS*FRLCGE Trigger: TTCCCCACAGAGTCTGAAGCAAGAGCATTGGCTAAA...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAATTTAGCCAATGCTCTTaGTTCAGACTCTGTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKFSQCS*FRLCGE Trigger: TTCCCCACAGAGTCTGAAGCAAGAGCATTGGCTAAA...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTCCTCTCTTTAGCCAATaGTCTTGCTTCAGACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLPLFSQ*SCFRLC Trigger: ACAGAGTCTGAAGCAAGAGCATTGGCTAAAGAGAGG...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTCCTCTCTTTAGCCAATaGTCTTGCTTCAGACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSPLFSQ*SCFRLC Trigger: ACAGAGTCTGAAGCAAGAGCATTGGCTAAAGAGAGG...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGTCAAGAACTGGTTCTTaGTTGATGATCCGATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLSRTGS*LMIRFT Trigger: GGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGA...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACATCAAGAACTGGTTCTTaGTTGATGATCCGATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKLTLGEISSQILHAEGTSRTGS*LMIRFT Trigger: GGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGA...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTCAAGAACTGGTTCTTaGTTGATGATCCGATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLSRTGS*LMIRFT Trigger: GGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGA...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTCTTCTGCGCTCATACTaGTCCTCCGGCTGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSLLRSY*SSGCLF Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAG...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR CCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTGCTGTATGTGGTACTTaGTGGGGTTTTCCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFAVCGT*WGFPGG Trigger: CCCACCTGGAAAACCCCACCAAGTACCACATACAGC...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTGGATCATTTGACTTaGGGATCAGAGTACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLESEKVLDVFPTIFLPPLDHLT*GSEYLA Trigger: AGCTAGGTACTCTGATCCCCAAGTCAAATGATCCAG...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGACTGGATCATTTGACTTaGGGATCAGAGTACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGLDHLT*GSEYLA Trigger: AGCTAGGTACTCTGATCCCCAAGTCAAATGATCCAG...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGCAGTTCTCAAGAACTaGTTCTTGCTTGATGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: KIPLLRKLTLGEISSQILAVLKN*FLLDDP Trigger: CGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTGCAGTTCTCAAGAACTaGTTCTTGCTTGATGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILAVLKN*FLLDDP Trigger: CGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGC...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGATGCTGTACAAGTTCCTaGCTGCAGTTCTCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGCCTSS*LQFSRT Trigger: AGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCA...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTTCTGCAGAACTGCTGTaGGGAAACCAGAAGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFSAELL*GNQKAH Trigger: GTGTGCCTTCTGGTTTCCCCACAGCAGTTCTGCAGA...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113339.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGTTCTTCATTATAACTTaGTTCCAGGCTGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSESSHLEKSVHRYCTLKFFIIT*FQADDV Trigger: GACATCATCAGCCTGGAATCAAGTTATAATGAAGAA...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAAAATACACGCTGTaGGCTCCCTTTTTATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLGKYTL*APFLCW Trigger: CCAACATAAAAAGGGAGCTCACAGCGTGTATTTTCC...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR GCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAAACGTATTTGCCATTTaGAAGGCCGGATCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLNVFAI*KAGSIK Trigger: CTTGATGGATCCGGCCTTGCAAATGGCAAATACGTT...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTTCAAGAACTGGTTCTTaGTTGATGATCCGATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCSRTGS*LMIRFT Trigger: GGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGA...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTTTAGCCAATGCTCTTaGTTCAGACTCTGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTFSQCS*FRLCEL Trigger: GAGCTCACAGAGTCTGAAGCAAGAGCATTGGCTAAA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSSRMSC*RSKMRD Trigger: ATCACGCATCTTGCTACGCCAGCAACTCATGCGTGA...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 72 bp | ATGCCATACTTTCTTTCAACAAAGCTTCCTAGAAAGTaGCTCTGCCTTGGCCATAGTCAACTTTGTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: MPYFLSTKLPRK*LCLGHSQLCET Trigger: GGTTTCACAAAGTTGACTATGGCCAAGGCAGAGCAACTTTCTAGGAAGCTTTGTTGAAAGAAAGTATGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR TCA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGTTCTTCATTATAACTTaGTTCCAGGCTGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLFFIIT*FQADDV Trigger: GACATCATCAGCCTGGAATCAAGTTATAATGAAGAA...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CCA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAGTTCGTAATAGGTTTTaGGTTCTTCGTGAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKVRNRF*VLRETP Trigger: AGGAGTTTCACGAAGAACCCAAAACCTATTACGAAC...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTTTCTTCATTATAACTTaGTTCCAGGCTGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGEISSQILHAEGTILFFIIT*FQADDV Trigger: GACATCATCAGCCTGGAATCAAGTTATAATGAAGAA...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR TCA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTTTCTTCATTATAACTTaGTTCCAGGCTGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRKRESLGCLSHHLSSSSFFIIT*FQADDV Trigger: GACATCATCAGCCTGGAATCAAGTTATAATGAAGAA...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR TCA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTGGAAAATACACGCTGTaGGCTCCCTTTTTATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFGKYTL*APFLCW Trigger: CCAACATAAAAAGGGAGCTCACAGCGTGTATTTTCC...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CCA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGTTCGTAATAGGTTTTaGGTTCTTCGTGAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLVRNRF*VLRETP Trigger: AGGAGTTTCACGAAGAACCCAAAACCTATTACGAAC...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR GCA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTTCAAGAACTGGTTCTTaGTTGATGATCCGATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSSRTGS*LMIRFT Trigger: GGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGA...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| 3UTR CAA 72 bp | AAACATCTAGACTTGATACATGTAACTCTACAGATATaGCATAGGGTTATGCAAGTAAGCAATGCACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KHLDLIHVTLQI*HRVMQVSNAQT Trigger: TGTCTGTGCATTGCTTACTTGCATAACCCTATGCAATATCTGTAGAGTTACATGTATCAAGTCTAGATGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS TCA 90 bp | GCAGAGGGAAGGGTGGTGGGCACGCTGACGTTTATGGCTGGTGTCTaGCTCACGGCCACTCTCTGTTGCATGAACTGGGCTGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AEGRVVGTLTFMAGV*LTATLCCMNWAACS Trigger: GCTGCAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGCGTGCCCACCACCCTTCCCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS TCA 90 bp | CTTCCATCGGCACCTGGGTGGCAGAGGGAAGGGTGGTGGGCACGCTaGCGTTTATGGCTGGTGTCTGACTCACGGCCACTCTCTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSAPGWQREGWWAR*RLWLVSDSRPLSVA Trigger: TGCAACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGCGTGCCCACCACCCTTCCCTCTGCCACCCAGGTGCCGATGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS CCA 90 bp | CTGGGTGGCAGAGGGAAGGGTGGTGGGCACGCTGACGTTTATGGCTaGTGTCTGACTCACGGCCACTCTCTGTTGCATGAACTGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGGRGKGGGHADVYG*CLTHGHSLLHELGC Trigger: GCAGCCCAGTTCATGCAACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGCGTGCCCACCACCCTTCCCTCTGCCACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS GCA 90 bp | TTCACAGTTGGAGTTAAGAGTGAGCATAGCCATAGGGCTGTTGGGTaGGCTGCTCCCCGGCACTGGTGGCATGGCATGGTCGCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FTVGVKSEHSHRAVG*AAPRHWWHGMVARL Trigger: CAGCCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTATGCTCACTCTTAACTCCAACTGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS CCA 90 bp | GGTGCGCTGCTCCCCGGCACTGGTGGCATGGCATGGTCGCCAGGCTaGTTTGGACATGGTGAGCTCAGGACTTGGCTGGCATGTTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: GALLPGTGGMAWSPG*FGHGELRTWLACLF Trigger: AAATAAACATGCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGCGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | TCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATGGTGGCAACACGGCCACTCTCTGTaGCATGAACTGGGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSCVLGGRCLESPWWQHGHSL*HELGCL Trigger: CAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGTG...TTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| CDS-3UTR CAA 90 bp | TCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATGGTGGCAATTGGCTGGACAGGAGTaGCTGATGGTAAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSCVLGGRCLESPWWQLAGQE*LMVRPG Trigger: GCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAA...TTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS CCA 90 bp | TGCTCCCTGCGCTCCTGCTCCTGCATCTGCTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGATGTCATAGTGGAGGAGCTTAACGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSLRSCSCICSRMSC*RSKMRDVIVEELNG Trigger: TCCGTTAAGCTCCTCCACTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCATAGCCATAGGGCTGTaGGGTGCGCTGCTCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLAQKAHTWRNQFTDTARIAIGL*GALLPG Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTAT...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS GCA 90 bp | GCACGACGCTCGAGAGTGCGTGTTCATACCTGGGCACTCACTCTCTaGCCTGCTCTGCTCCTCAAACTTATAAAATGCCTGGTGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ARRSRVRVHTWALTL*PALLLKLIKCLVPL Trigger: CAGAGGCACCAGGCATTTTATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCACTCTCGAGCGTCGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203938.2 |
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| CDS-3UTR CAA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTATAGCCATAGGGCTGTaGGGTGCGCTGCTCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLRKLTLGEISSQILHAIAIGL*GALLPG Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTAT...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TCTCCCAGCAGCTGTGTCTTAGGAGGAAGGTGCCTGGAAAGCCCATGGTGGCAATCGTTGCTGTTCCCGTaGCAACTTCCGGATGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSCVLGGRCLESPWWQSLLFP*QLPDVV Trigger: GACTACATCCGGAAGTTGCAACGGGAACAGCAACGA...TTGCCACCATGGGCTTTCCAGGCACCTTCCTCCTAAGACACAGCTGCTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| CDS-3UTR CAA 90 bp | TCCTCCGGCTGCTTGTTTTTGAAGCTCCTGGCGACACTGATGACAGCAGTGGGTTGCTGTATGTGGTACTaGGTGGGGTTTTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGCLFLKLLATLMTAVGCCMWY*VGFSRW Trigger: CCACCTGGAAAACCCCACCAAGTACCACATACAGCA...ACCCACTGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| CDS-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACATAGCCATAGGGCTGTaGGGTGCGCTGCTCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPLLRKLTLGEISSQILHIAIGL*GALLPG Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTAT...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS GCA 90 bp | ACGCTCGAGAGTGCGTGTTCATACCTGGGCACTCACTCTCTGCCCTaGTCTGCTCCTCAAACTTATAAAATGCCTGGTGCCTCTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLESACSYLGTHSLP*SAPQTYKMPGASEL Trigger: AAGCTCAGAGGCACCAGGCATTTTATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCACTCTCGAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203938.2 |
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| CDS-3UTR CAA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGGTCGCCAGGCTGGTTaGGACATGGTGAGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLLRKLTLGEISSQILHAGRQAG*DMVSSG Trigger: TCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACC...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | CAGTTCTCAAGAACTGGTTCTTGCTTGATGATCCGATTCACCAGATCAGGCGAGGGTCGCCAGGCTGGTTaGGACATGGTGAGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QFSRTGSCLMIRFTRSGEGRQAG*DMVSSG Trigger: TCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACC...CTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATAGCCATAGGGCTGTaGGGTGCGCTGCTCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKLTLGEISSQILHAEGTIAIGL*GALLPG Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTAT...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTATAGCCATAGGGCTGTaGGGTGCGCTGCTCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FRKRESLGCLSHHLSSSSIAIGL*GALLPG Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTAT...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS CCA 90 bp | ATCATCCATCTGCATGCACGACGCTCGAGAGTGCGTGTTCATACCTaGGCACTCACTCTCTGCCCTGCTCTGCTCCTCAAACTTATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IIHLHARRSRVRVHT*ALTLCPALLLKLIK Trigger: TTTTATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCACTCTCGAGCGTCGTGCATGCAGATGGATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 ENSMUST00000203938.2 |
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| CDS-3UTR CAA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGGGTCGCCAGGCTGGTTaGGACATGGTGAGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLGRQAG*DMVSSG Trigger: TCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACC...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTATAGCCATAGGGCTGTaGGGTGCGCTGCTCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTIAIGL*GALLPG Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTAT...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACTTGGCTGGACAGGAGTaGCTGATGGTAAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPLLRKLTLGEISSQILHLAGQE*LMVRPG Trigger: GCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAA...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGTGCTCCTCCGGCTGCTaGTTTTTGAAGCTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSESSHLEKSVHRYCTLKCSSGC*FLKLLA Trigger: CGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCA...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCGGTCGCCAGGCTGGTTaGGACATGGTGAGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MLISKEVTDRQSSHQVFPGRQAG*DMVSSG Trigger: TCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACC...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | GGTGAGAGGGCATCGTCCATCAGGATGTCTTCCAAGTTGGAGCCCATCTTCCTGGCCTCTTTTTCACAGTaGGAGTTAAGAGTGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GERASSIRMSSKLEPIFLASFSQ*ELRVSI Trigger: TATGCTCACTCTTAACTCCAACTGTGAAAAAGAGGC...CAGGAAGATGGGCTCCAACTTGGAAGACATCCTGATGGACGATGCCCTCTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139462.2 |
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| CDS-3UTR CAA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTTGGCTGGACAGGAGTaGCTGATGGTAAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLLAGQE*LMVRPG Trigger: GCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAA...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGTCCGGCTGCTTGTTTTaGAAGCTCCTGGCGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: CSESSHLEKSVHRYCTLKSGCLF*KLLATL Trigger: CAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGA...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGGAGCTTAACGGAGGCTaGGAGGCCCCAGAATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EISSQILHAEGTILRRPLELNGG*EAPECS Trigger: AGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTC...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGGAGCTTAACGGAGGCTaGGAGGCCCCAGAATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLELNGG*EAPECS Trigger: AGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTC...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCACGGCCACTCTCTGTaGCATGAACTGGGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLESEKVLDVFPTIFLPPHGHSL*HELGCL Trigger: CAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGTG...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS-3UTR CAA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGGCCACTCTCTGTaGCATGAACTGGGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KIPLLRKLTLGEISSQILHGHSL*HELGCL Trigger: CAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGTG...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGTCGCCAGGCTGGTTaGGACATGGTGAGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLGRQAG*DMVSSG Trigger: TCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACC...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTTTGGCTGGACAGGAGTaGCTGATGGTAAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCLAGQE*LMVRPG Trigger: GCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAA...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTTTGGCTGGACAGGAGTaGCTGATGGTAAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLESEKVLDVFPTIFLPPLAGQE*LMVRPG Trigger: GCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAA...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS-3UTR CAA 90 bp | CCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: PLLRKLTLGEISSQILHASSLFM*GRLAGQ Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...AGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACTCGTTGCTGTTCCCGTaGCAACTTCCGGATGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IPLLRKLTLGEISSQILHSLLFP*QLPDVV Trigger: GACTACATCCGGAAGTTGCAACGGGAACAGCAACGA...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGGCATGGTGCCGAGGTaGTTGGTAAAGGTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CSESSHLEKSVHRYCTLKGMVPR*LVKVMV Trigger: TACCATCACCTTTACCAACAACCTCGGCACCATGCC...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTAGGATGTCTTCCAAGTaGGAGCCCATCTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLRMSSK*EPIFLG Trigger: CCCCAGGAAGATGGGCTCCAACTTGGAAGACATCCT...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTCCGGCTGCTTGTTTTaGAAGCTCCTGGCGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLSGCLF*KLLATL Trigger: CAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGA...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGATGCTCCTCCGGCTGCTaGTTTTTGAAGCTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGCSSGC*FLKLLA Trigger: CGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCA...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTGCTCCTCCGGCTGCTaGTTTTTGAAGCTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KIPLLRKLTLGEISSQILCSSGC*FLKLLA Trigger: CGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCA...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTTGCTCCTCCGGCTGCTaGTTTTTGAAGCTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LTLGEISSQILHAEGTILCSSGC*FLKLLA Trigger: CGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCA...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTGAGCTTAACGGAGGCTaGGAGGCCCCAGAATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLELNGG*EAPECS Trigger: AGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTC...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS TCA 90 bp | TTATTTGCTAAAGTGGTAGAAAGGTACTGCTTTACCTGGTGCCTCTaGGCTTGCTGTATGTGGTACTTGGTGGGGTTTTCCAGGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFAKVVERYCFTWCL*ACCMWYLVGFSRWV Trigger: GACCCACCTGGAAAACCCCACCAAGTACCACATACAGCAAGCTCAGAGGCACCAGGTAAAGCAGTACCTTTCTACCACTTTAGCAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTGCTGTATGTGGTACTaGGTGGGGTTTTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EISSQILHAEGTILRRPLCCMWY*VGFSRW Trigger: CCACCTGGAAAACCCCACCAAGTACCACATACAGCA...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTGCTGGTGCCTCTGAGCTaGCTGTATGTGGTACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VNFKGGHRQTKLTPSFPLLVPLS*LYVVLG Trigger: ACCAAGTACCACATACAGCAAGCTCAGAGGCACCAG...CAGGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: IPLLRKLTLGEISSQILHSSLFM*GRLAGQ Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CSESSHLEKSVHRYCTLKSSLFM*GRLAGQ Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACATCGTTGCTGTTCCCGTaGCAACTTCCGGATGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RKLTLGEISSQILHAEGTSLLFP*QLPDVV Trigger: GACTACATCCGGAAGTTGCAACGGGAACAGCAACGA...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACAAGGTCCTTAGCTCGTaGCTGTTCCCGTTGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: IPLLRKLTLGEISSQILHKVLSS*LFPLQL Trigger: AAGTTGCAACGGGAACAGCAACGAGCTAAGGACCTT...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCAGAACTGGTTCTTGCTaGATGATCCGATTCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLAQKAHTWRNQFTDTARRTGSC*MIRFTR Trigger: TCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCT...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTGGCATGGTGCCGAGGTaGTTGGTAAAGGTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLGMVPR*LVKVMV Trigger: TACCATCACCTTTACCAACAACCTCGGCACCATGCC...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAGGCATGGTGCCGAGGTaGTTGGTAAAGGTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RKLTLGEISSQILHAEGTGMVPR*LVKVMV Trigger: TACCATCACCTTTACCAACAACCTCGGCACCATGCC...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAAGGATGTCTTCCAAGTaGGAGCCCATCTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKRMSSK*EPIFLG Trigger: CCCCAGGAAGATGGGCTCCAACTTGGAAGACATCCT...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTAGGATGTCTTCCAAGTaGGAGCCCATCTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLESEKVLDVFPTIFLPPRMSSK*EPIFLG Trigger: CCCCAGGAAGATGGGCTCCAACTTGGAAGACATCCT...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTAGGATGTCTTCCAAGTaGGAGCCCATCTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLRMSSK*EPIFLG Trigger: CCCCAGGAAGATGGGCTCCAACTTGGAAGACATCCT...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGGATGTCTTCCAAGTaGGAGCCCATCTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCRMSSK*EPIFLG Trigger: CCCCAGGAAGATGGGCTCCAACTTGGAAGACATCCT...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTTCCGGCTGCTTGTTTTaGAAGCTCCTGGCGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLSGCLF*KLLATL Trigger: CAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGA...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CAA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAATCCGGCTGCTTGTTTTaGAAGCTCCTGGCGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKSGCLF*KLLATL Trigger: CAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGA...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTTCCGGCTGCTTGTTTTaGAAGCTCCTGGCGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLGEISSQILHAEGTILSGCLF*KLLATL Trigger: CAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGA...AAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGATGCTGTATGTGGTACTaGGTGGGGTTTTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGCCMWY*VGFSRW Trigger: CCACCTGGAAAACCCCACCAAGTACCACATACAGCA...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAAGACGGGTAACGTATTaGCCATTTGCAAGGCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RKLTLGEISSQILHAEGTRRVTY*PFARPD Trigger: ATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCT...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLSSLFM*GRLAGQ Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACTCTGGATCATTTGACTaGGGGATCAGAGTACCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPLLRKLTLGEISSQILHSGSFD*GIRVPS Trigger: GCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGA...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTTGAGAATGGTTCCCTaGTTCCACCGCATGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLLRMVP*FHRMSG Trigger: TCCAGACATGCGGTGGAACAAGGGAACCATTCTCAA...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAAAGGTCCTTAGCTCGTaGCTGTTCCCGTTGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: RKLTLGEISSQILHAEGTKVLSS*LFPLQL Trigger: AAGTTGCAACGGGAACAGCAACGAGCTAAGGACCTT...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTAAGGTCCTTAGCTCGTaGCTGTTCCCGTTGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLKVLSS*LFPLQL Trigger: AAGTTGCAACGGGAACAGCAACGAGCTAAGGACCTT...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTATGGTGCCGAGGTTGTaGGTAAAGGTGATGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCMVPRL*VKVMVP Trigger: CGGTACCATCACCTTTACCAACAACCTCGGCACCAT...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCATGGTGCCGAGGTTGTaGGTAAAGGTGATGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: MLISKEVTDRQSSHQVFPMVPRL*VKVMVP Trigger: CGGTACCATCACCTTTACCAACAACCTCGGCACCAT...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAATGGTGCCGAGGTTGTaGGTAAAGGTGATGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGMVPRL*VKVMVP Trigger: CGGTACCATCACCTTTACCAACAACCTCGGCACCAT...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTATGGTGCCGAGGTTGTaGGTAAAGGTGATGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: HLESEKVLDVFPTIFLPPMVPRL*VKVMVP Trigger: CGGTACCATCACCTTTACCAACAACCTCGGCACCAT...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CAA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTGGCATGGTGCCGAGGTaGTTGGTAAAGGTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FRKRESLGCLSHHLSSSSGMVPR*LVKVMV Trigger: TACCATCACCTTTACCAACAACCTCGGCACCATGCC...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCGCTGCTCTTCAGAGGTaGACTTTTGAGTTCGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: PLAQKAHTWRNQFTDTARAALQR*TFEFVI Trigger: TATTACGAACTCAAAAGTCAACCTCTGAAGAGCAGC...GCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCACGGCCACTCTCTGTaGCATGAACTGGGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFHGHSL*HELGCL Trigger: CAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGTG...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTGCTGTATGTGGTACTaGGTGGGGTTTTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTCCMWY*VGFSRW Trigger: CCACCTGGAAAACCCCACCAAGTACCACATACAGCA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAAGACGGGTAACGTATTaGCCATTTGCAAGGCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGRRVTY*PFARPD Trigger: ATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCT...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTAGTTGTAAAAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: HRYCTLKVQYLGGLCSCKSSLFM*GRLAGQ Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...TTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GTTACAGTTCAGTCAGTGCTGGTCCAAAAGAGACTGCTGAGATTTTTAAGGCACTCTGGATCATTTGACTaGGGGATCAGAGTACCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTVQSVLVQKRLLRFLRHSGSFD*GIRVPS Trigger: GCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGA...GTGCCTTAAAAATCTCAGCAGTCTCTTTTGGACCAGCACTGACTGAACTGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR CAA 90 bp | GAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTCTGGATCATTTGACTaGGGGATCAGAGTACCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: EISSQILHAEGTILRRPLSGSFD*GIRVPS Trigger: GCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGA...CAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGATTGAGAATGGTTCCCTaGTTCCACCGCATGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGLRMVP*FHRMSG Trigger: TCCAGACATGCGGTGGAACAAGGGAACCATTCTCAA...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | ATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTCCCCTTGAGAATGGTTCCCTaGTTCCACCGCATGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MLISKEVTDRQSSHQVFPLRMVP*FHRMSG Trigger: TCCAGACATGCGGTGGAACAAGGGAACCATTCTCAA...GGGGAAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTTGAGAATGGTTCCCTaGTTCCACCGCATGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KIPLLRKLTLGEISSQILLRMVP*FHRMSG Trigger: TCCAGACATGCGGTGGAACAAGGGAACCATTCTCAA...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTAAGGTCCTTAGCTCGTaGCTGTTCCCGTTGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: HLESEKVLDVFPTIFLPPKVLSS*LFPLQL Trigger: AAGTTGCAACGGGAACAGCAACGAGCTAAGGACCTT...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGCTCAAGAACTGGTTCTaGCTTGATGATCCGATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSESSHLEKSVHRYCTLKLKNWF*LDDPIH Trigger: GTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAG...CTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTATGGTGCCGAGGTTGTaGGTAAAGGTGATGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTMVPRL*VKVMVP Trigger: CGGTACCATCACCTTTACCAACAACCTCGGCACCAT...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGCATGGTGCCGAGGTaGTTGGTAAAGGTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTGMVPR*LVKVMV Trigger: TACCATCACCTTTACCAACAACCTCGGCACCATGCC...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | TGCCACTTGGTCAAAATGTTGTTATCAAGTAATCTGCCAATACAGTGTTTCTCTGAGCTTAACGGAGGCTaGGAGGCCCCAGAATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CHLVKMLLSSNLPIQCFSELNGG*EAPECS Trigger: AGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTC...AGAGAAACACTGTATTGGCAGATTACTTGATAACAACATTTTGACCAAGTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCCTCTTTTTCACAGTaGGAGTTAAGAGTGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: IPLLRKLTLGEISSQILHASFSQ*ELRVSI Trigger: TATGCTCACTCTTAACTCCAACTGTGAAAAAGAGGC...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | TCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAAGACGGGTAACGTATTaGCCATTTGCAAGGCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SHLEKSVHRYCTLKVQYLRRVTY*PFARPD Trigger: ATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCT...TAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGTCTGGATCATTTGACTaGGGGATCAGAGTACCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: KIPLLRKLTLGEISSQILSGSFD*GIRVPS Trigger: GCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGA...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | CACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGATCTGGATCATTTGACTaGGGGATCAGAGTACCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLEKSVHRYCTLKVQYLGSGSFD*GIRVPS Trigger: GCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGA...TCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTTTGAGAATGGTTCCCTaGTTCCACCGCATGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KNPLAQKAHTWRNQFTDTLRMVP*FHRMSG Trigger: TCCAGACATGCGGTGGAACAAGGGAACCATTCTCAA...AGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS-3UTR CAA 90 bp | GTTACAGTTCAGTCAGTGCTGGTCCAAAAGAGACTGCTGAGATTTTTAAGGCACAGAACTGGTTCTTGCTaGATGATCCGATTCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTVQSVLVQKRLLRFLRHRTGSC*MIRFTR Trigger: TCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCT...GTGCCTTAAAAATCTCAGCAGTCTCTTTTGGACCAGCACTGACTGAACTGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043637.14 |
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| CDS-3UTR CAA 90 bp | AGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAAGAACTGGTTCTTGCTaGATGATCCGATTCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKLTLGEISSQILHAEGTRTGSC*MIRFTR Trigger: TCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCT...TGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | ATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGCACGCTGCTCTTCAGAGGTaGACTTTTGAGTTCGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: IPLLRKLTLGEISSQILHAALQR*TFEFVI Trigger: TATTACGAACTCAAAAGTCAACCTCTGAAGAGCAGC...GTGCAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | GAGAAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTGCCTCTTTTTCACAGTaGGAGTTAAGAGTGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: EKSVHRYCTLKVQYLGGLASFSQ*ELRVSI Trigger: TATGCTCACTCTTAACTCCAACTGTGAAAAAGAGGC...AAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTTCGTTGCTGTTCCCGTaGCAACTTCCGGATGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFSLLFP*QLPDVV Trigger: GACTACATCCGGAAGTTGCAACGGGAACAGCAACGA...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | CTCCTCCTCTTCCTCTTCCTCCTCTTCTCCTTCTTCTATCATAATCATCATCTTAGAACTGGTTCTTGCTaGATGATCCGATTCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLFLLFSFFYHNHHLRTGSC*MIRFTR Trigger: TCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCT...AAGATGATGATTATGATAGAAGAAGGAGAAGAGGAGGAAGAGGAAGAGGAGGAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS-3UTR CAA 90 bp | CATTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTCAAGAACTGGTTCTaGCTTGATGATCCGATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HLESEKVLDVFPTIFLPPLKNWF*LDDPIH Trigger: GTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAG...AGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS-3UTR CAA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTCTCAAGAACTGGTTCTaGCTTGATGATCCGATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCLKNWF*LDDPIH Trigger: GTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAG...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TTTAGAAAGCGAGAAAGTCTTGGATGTCTTTCCCACCATCTTTCTTCCTCCTCTCTCAAGAACTGGTTCTaGCTTGATGATCCGATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FRKRESLGCLSHHLSSSSLKNWF*LDDPIH Trigger: GTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAG...AGAGGAGGAAGAAAGATGGTGGGAAAGACATCCAAGACTTTCTCGCTTTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 |
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| CDS-3UTR CAA 90 bp | AAATCAGTTCACAGATACTGCACGCTGAAGGTACAATACTTAGGAGGCCTTTGTGCCTCTTTTTCACAGTaGGAGTTAAGAGTGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: KSVHRYCTLKVQYLGGLCASFSQ*ELRVSI Trigger: TATGCTCACTCTTAACTCCAACTGTGAAAAAGAGGC...ACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGCAGTATCTGTGAACTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | AAAATCCCCTTGCTCAGAAAGCTCACACTTGGAGAAATCAGTTCACAGATACTGGCCTCTTTTTCACAGTaGGAGTTAAGAGTGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: KIPLLRKLTLGEISSQILASFSQ*ELRVSI Trigger: TATGCTCACTCTTAACTCCAACTGTGAAAAAGAGGC...CAGTATCTGTGAACTGATTTCTCCAAGTGTGAGCTTTCTGAGCAAGGGGATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTAGACGGGTAACGTATTaGCCATTTGCAAGGCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFRRVTY*PFARPD Trigger: ATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCT...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS-3UTR CAA 90 bp | TTACATGTTAATTTCAAAGGAGGTCACAGACAGACAAAGCTCACACCAAGTTTTAGAACTGGTTCTTGCTaGATGATCCGATTCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHVNFKGGHRQTKLTPSFRTGSC*MIRFTR Trigger: TCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCT...AAAACTTGGTGTGAGCTTTGTCTGTCTGTGACCTCCTTTGAAATTAACATGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS CCA 72 bp | GGCTGTTGGGTGCGCTGCTCCCCGGCACTGGTGGCATaGCATGGTCGCCAGGCTGGTTTGGACATGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCWVRCSPALVA*HGRQAGLDMVS Trigger: GCTCACCATGTCCAAACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS CCA 72 bp | CATAGGGCTGTTGGGTGCGCTGCTCCCCGGCACTGGTaGCATGGCATGGTCGCCAGGCTGGTTTGGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: HRAVGCAAPRHW*HGMVARLVWTW Trigger: CCATGTCCAAACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS CCA 72 bp | AGCCATAGGGCTGTTGGGTGCGCTGCTCCCCGGCACTaGTGGCATGGCATGGTCGCCAGGCTGGTTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SHRAVGCAAPRH*WHGMVARLVWT Trigger: TGTCCAAACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS CCA 72 bp | CTCCCCGGCACTGGTGGCATGGCATGGTCGCCAGGCTaGTTTGGACATGGTGAGCTCAGGACTTGGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGTGGMAWSPG*FGHGELRTWLA Trigger: TGCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS GCA 72 bp | GGAGTTAAGAGTGAGCATAGCCATAGGGCTGTTGGGTaGGCTGCTCCCCGGCACTGGTGGCATGGCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVKSEHSHRAVG*AAPRHWWHGMV Trigger: GACCATGCCATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTATGCTCACTCTTAACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS CAA 72 bp | CAGTTGGAGTTAAGAGTGAGCATAGCCATAGGGCTGTaGGGTGCGCTGCTCCCCGGCACTGGTGGCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLELRVSIAIGL*GALLPGTGGMA Trigger: TGCCATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTATGCTCACTCTTAACTCCAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS CAA 90 bp | CGCTGCTCCCCGGCACTGGTGGCATGGCATGGTCGCCAGGCTGGTTaGGACATGGTGAGCTCAGGACTTGGCTGGCATGTTTATTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RCSPALVAWHGRQAG*DMVSSGLGWHVYLL Trigger: TAGCAAATAAACATGCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS TCA 72 bp | AGGGTGGTGGGCACGCTGACGTTTATGGCTGGTGTCTaGCTCACGGCCACTCTCTGTTGCATGAACTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVVGTLTFMAGV*LTATLCCMNWA Trigger: AGCCCAGTTCATGCAACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGCGTGCCCACCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS CCA 72 bp | CTGCATGCACGACGCTCGAGAGTGCGTGTTCATACCTaGGCACTCACTCTCTGCCCTGCTCTGCTCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LHARRSRVRVHT*ALTLCPALLLK Trigger: TTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCACTCTCGAGCGTCGTGCATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 ENSMUST00000203938.2 |
||
| CDS CAA 90 bp | TCTTTTTCACAGTTGGAGTTAAGAGTGAGCATAGCCATAGGGCTGTaGGGTGCGCTGCTCCCCGGCACTGGTGGCATGGCATGGTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SFSQLELRVSIAIGL*GALLPGTGGMAWSP Trigger: TGGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTATGCTCACTCTTAACTCCAACTGTGAAAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
||
| CDS GCA 72 bp | CTGCGCTCCTGCTCCTGCATCTGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGTGATGTCATAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRSCSCICSRMS*WRSKMRDVIVE Trigger: CTCCACTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS CCA 72 bp | CGCTCCTGCTCCTGCATCTGCTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGATGTCATAGTGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSCSCICSRMSC*RSKMRDVIVEE Trigger: CTCCTCCACTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
||
| CDS CCA 72 bp | AGAGGGAAGGGTGGTGGGCACGCTGACGTTTATGGCTaGTGTCTGACTCACGGCCACTCTCTGTTGCATGAA | + |
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Preference number: 6 (lower is better) Translates to: RGKGGGHADVYG*CLTHGHSLLHE Trigger: TTCATGCAACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGCGTGCCCACCACCCTTCCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 |
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| CDS CAA 90 bp | CGTAGCAAGATGCGTGATGTCATAGTGGAGGAGCTTAACGGAGGCTaGGAGGCCCCAGAATGCTCTGCAGAACTGCTGTGGGGAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: RSKMRDVIVEELNGG*EAPECSAELLWGNQ Trigger: CTGGTTTCCCCACAGCAGTTCTGCAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTCCTCCACTATGACATCACGCATCTTGCTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113339.8 |
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| CDS CAA 72 bp | ATGCGTGATGTCATAGTGGAGGAGCTTAACGGAGGCTaGGAGGCCCCAGAATGCTCTGCAGAACTGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: MRDVIVEELNGG*EAPECSAELLW Trigger: CCACAGCAGTTCTGCAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTCCTCCACTATGACATCACGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113339.8 |
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| CDS CAA 90 bp | CGTAGCAAGATGCGTGATGTCATAGTGGAGGAGCTTAACGGAGGCTaGGAGGCCCCAGAATGCTCTGCAGAACTGCTGCTCTTCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RSKMRDVIVEELNGG*EAPECSAELLLFRG Trigger: ACCTCTGAAGAGCAGCAGTTCTGCAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTCCTCCACTATGACATCACGCATCTTGCTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
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| CDS GCA 72 bp | ATTACATCATCCATCTGCATGCACGACGCTCGAGAGTaGGTGTTCATACCTGGGCACTCACTCTCTGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ITSSICMHDARE*VFIPGHSLSAL Trigger: CAGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCACTCTCGAGCGTCGTGCATGCAGATGGATGATGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000203884.3 ENSMUST00000203938.2 |
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| CDS CAA 72 bp | ATGCGTGATGTCATAGTGGAGGAGCTTAACGGAGGCTaGGAGGCCCCAGAATGCTCTGCAGAACTGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: MRDVIVEELNGG*EAPECSAELRH Trigger: GTGTCTCAGTTCTGCAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTCCTCCACTATGACATCACGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101123.10 |
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| CDS GCA 72 bp | AGTGCGTGTTCATACCTGGGCACTCACTCTCTGCCCTaGTCTGCTCCTCAAACTTATAAAATGCCTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SACSYLGTHSLP*SAPQTYKMPGA Trigger: GGCACCAGGCATTTTATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203938.2 |
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| CDS TCA 72 bp | AAAGTGGTAGAAAGGTACTGCTTTACCTGGTGCCTCTaGGCTTGCTGTATGTGGTACTTGGTGGGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: KVVERYCFTWCL*ACCMWYLVGFS Trigger: GGAAAACCCCACCAAGTACCACATACAGCAAGCTCAGAGGCACCAGGTAAAGCAGTACCTTTCTACCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043628.13 ENSMUST00000043637.14 ENSMUST00000101123.10 ENSMUST00000113339.8 ENSMUST00000139462.2 ENSMUST00000203884.3 |
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| CDS CAA 72 bp | CCCAGAATGCTCTGCAGAACTGCTGCTCTTCAGAGGTaGACTTTTGAGTTCGTAATAGGTTTTGGGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PRMLCRTAALQR*TFEFVIGFGFF Trigger: GAAGAACCCAAAACCTATTACGAACTCAAAAGTCAACCTCTGAAGAGCAGCAGTTCTGCAGAGCATTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043637.14 ENSMUST00000203884.3 |
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