Pregenerated sensors for MISP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035852Ensembl transcript IDs: ENSMUST00000046833.5, ENSMUST00000169041.9, ENSMUST00000218687.2, ENSMUST00000219305.2, ENSMUST00000219734.2
Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTaGAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGA | + |
Preference number: 1 (lower is better) Translates to: VGKSGMAGPQTEPSF*SDRSKLWAVRRAEG Trigger: TCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR GCA 90 bp | AAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTaGGGAGGGCTGAGGGATGTGAGGGGGATCGGTGGATTATCATTT | + |
Preference number: 1 (lower is better) Translates to: KQSLLSAVTDPSSGL*GGLRDVRGIGGLSF Trigger: AAATGATAATCCACCGATCCCCCTCACATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR GCA 90 bp | CTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATCGGCCTCCACAGGACTaGAGTGAGGCAGGAGAATGG | + |
Preference number: 2 (lower is better) Translates to: LLSAVTDPSSGLCGGLRDRPPQD*SEAGEW Trigger: CCATTCTCCTGCCTCACTGCAGTCCTGTGGAGGCCG...ATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR TCA 90 bp | TTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCTCCACAGGACTGCAGTaGGGCAGGAGAATGGCCCCC | + |
Preference number: 2 (lower is better) Translates to: FGVGKSGMAGPQTEPSFCSTGLQ*GRRMAP Trigger: GGGGGCCATTCTCCTGCCTCACTGCAGTCCTGTGGA...GCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR GCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTCGGCCTCCACAGGACTaGAGTGAGGCAGGAGAATGG | + |
Preference number: 2 (lower is better) Translates to: RLGLARVEWQVPKQSLLSRPPQD*SEAGEW Trigger: CCATTCTCCTGCCTCACTGCAGTCCTGTGGAGGCCG...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR CCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTGCATACGTTTGGGGTTaGCAAGAGTGGAATGGCAGG | + |
Preference number: 2 (lower is better) Translates to: GCLRHILCSRQAVQDRFIAYVWG*QEWNGR Trigger: CCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR GCA 90 bp | CCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTCGGCCTCCACAGGACTaGAGTGAGGCAGGAGAATGG | + |
Preference number: 2 (lower is better) Translates to: PGKTKSTAGHKHQPGLYVRPPQD*SEAGEW Trigger: CCATTCTCCTGCCTCACTGCAGTCCTGTGGAGGCCG...AACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR TCA 90 bp | AGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTTGGCAAGATCCACAGGACTGCAGTaGGGCAGGAGAATGGCCCCC | + |
Preference number: 2 (lower is better) Translates to: SSGQVYFIATGIRLGLARSTGLQ*GRRMAP Trigger: GGGGGCCATTCTCCTGCCTCACTGCAGTCCTGTGGA...TCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR GCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCGAAAACCAAATCAACTaGAGGCCACAAACATCAGCC | + |
Preference number: 2 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFENQIN*RPQTSA Trigger: GGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTC...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR GCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGAAAACCAAATCAACTaGAGGCCACAAACATCAGCC | + |
Preference number: 2 (lower is better) Translates to: RLGLARVEWQVPKQSLLSENQIN*RPQTSA Trigger: GGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTC...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR CCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTTGTGAGGGGGATCGGTaGATTATCATTTCAGCCTTA | + |
Preference number: 2 (lower is better) Translates to: RLGLARVEWQVPKQSLLSCEGDR*IIISAL Trigger: TAAGGCTGAAATGATAATCCACCGATCCCCCTCACA...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR-3UTR GCA 90 bp | GCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTACAGAGCCTTCTTTCTaGAGTGACAGATCCAAGCTC | + |
Preference number: 2 (lower is better) Translates to: APGRQFRTGLFHSNRHTFTEPSF*SDRSKL Trigger: GAGCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGT...AAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR GCA 72 bp | AGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTaGAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGG | + |
Preference number: 3 (lower is better) Translates to: SGMAGPQTEPSF*SDRSKLWAVRR Trigger: CCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR GCA 72 bp | GAATCACTCGCCCACCCCAGGGAAAACCAAATCAACTaGAGGCCACAAACATCAGCCTGGGCTGTATGTTTA | + |
Preference number: 3 (lower is better) Translates to: ESLAHPRENQIN*RPQTSAWAVCL Trigger: TAAACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTGGGCGAGTGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGCCTTGGGGGCTTGGTTaGTGCCTGGTGGGGTTCGTG | + |
Preference number: 4 (lower is better) Translates to: AETGGRSSGLHRTAVRQEPWGLG*CLVGFV Trigger: CACGAACCCCACCAGGCATCAACCAAGCCCCCAAGG...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGTCCAGCTCCCTCCGCTaGCTGCAGAGGGTGTCACTG | + |
Preference number: 4 (lower is better) Translates to: AETGGRSSGLHRTAVRQESSSLR*LQRVSL Trigger: CAGTGACACCCTCTGCAGGCAGCGGAGGGAGCTGGA...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGCTCGGGCATCTGGGCTaGGGATGCAATCGGAGCTCA | + |
Preference number: 4 (lower is better) Translates to: AETGGRSSGLHRTAVRQELGHLG*GCNRSS Trigger: TGAGCTCCGATTGCATCCTCAGCCCAGATGCCCGAG...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGGACTTTCCTTGCCTCTaGAGCCGGGTCTGTGGCTCG | + |
Preference number: 4 (lower is better) Translates to: AETGGRSSGLHRTAVRQEDFPCL*SRVCGS Trigger: CGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTC...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGCCCCTGGGGGACATCTaGGACCTTGAATCGCAGTGG | + |
Preference number: 4 (lower is better) Translates to: AETGGRSSGLHRTAVRQEPLGDI*DLESQW Trigger: CCACTGCGATTCAAGGTCCCAGATGTCCCCCAGGGG...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATAGGTCTCCCTGGCTGTaGGGCCGCAGGGGACCGGGT | + |
Preference number: 4 (lower is better) Translates to: LLSAVTDPSSGLCGGLRDRSPWL*GRRGPG Trigger: ACCCGGTCCCCTGCGGCCTCACAGCCAGGGAGACCT...ATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGATGCAGCCTGGAGTGTaGCCACTGTGCCACCTTTCC | + |
Preference number: 4 (lower is better) Translates to: AETGGRSSGLHRTAVRQEMQPGV*PLCHLS Trigger: GGAAAGGTGGCACAGTGGCCACACTCCAGGCTGCAT...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGGAAGCCTTGGGGGCTTaGTTGATGCCTGGTGGGGTT | + |
Preference number: 4 (lower is better) Translates to: AETGGRSSGLHRTAVRQEEALGA*LMPGGV Trigger: AACCCCACCAGGCATCAACCAAGCCCCCAAGGCTTC...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | AGCCTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGCAGGTGTGGATGCCCTaGCCACCTGCAGCCCCTCTC | + |
Preference number: 4 (lower is better) Translates to: SLLSAVTDPSSGLCGGLRQVWMP*PPAAPL Trigger: GAGAGGGGCTGCAGGTGGGCAGGGCATCCACACCTG...CCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGATCCTGAGGTCCCCATaGTCTGATGCAGCCTGGAGT | + |
Preference number: 4 (lower is better) Translates to: AETGGRSSGLHRTAVRQEILRSP*SDAAWS Trigger: ACTCCAGGCTGCATCAGACCATGGGGACCTCAGGAT...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | TCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATGTGCTCCTGGGCCAGCCTaGTCTCTCTCTCGATGGGCG | + |
Preference number: 4 (lower is better) Translates to: SFCSDRSKLWAVRRAEGCAPGPA*SLSRWA Trigger: CGCCCATCGAGAGAGAGATCAGGCTGGCCCAGGAGC...ACATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | AGCCTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGCTCCCTCCGCTGCCTaGAGAGGGTGTCACTGCTGT | + |
Preference number: 4 (lower is better) Translates to: SLLSAVTDPSSGLCGGLRAPSAA*RGCHCC Trigger: ACAGCAGTGACACCCTCTGCAGGCAGCGGAGGGAGC...CCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | TCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATGTCCAGTCAGGTGTGGATaGCCTGCCCACCTGCAGCCC | + |
Preference number: 4 (lower is better) Translates to: SFCSDRSKLWAVRRAEGCPVRCG*PAHLQP Trigger: GGGCTGCAGGTGGGCAGGGCATCCACACCTGACTGG...ACATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTGAGGTCCCCATGGTCTaGTGCAGCCTGGAGTGTGGC | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFIEVPMV*CSLECG Trigger: GCCACACTCCAGGCTGCATCAGACCATGGGGACCTC...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTAGGTCTCCCTGGCTGTaGGGCCGCAGGGGACCGGGT | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCRSPWL*GRRGPG Trigger: ACCCGGTCCCCTGCGGCCTCACAGCCAGGGAGACCT...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | TCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATGTCCTTGGGGGCTTGGTTaGTGCCTGGTGGGGTTCGTG | + |
Preference number: 4 (lower is better) Translates to: SFCSDRSKLWAVRRAEGCPWGLG*CLVGFV Trigger: CACGAACCCCACCAGGCATCAACCAAGCCCCCAAGG...ACATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTGCTCCCTCCGCTGCCTaGAGAGGGTGTCACTGCTGT | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFIAPSAA*RGCHCC Trigger: ACAGCAGTGACACCCTCTGCAGGCAGCGGAGGGAGC...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCCAGCTCCCTCCGCTaGCTGCAGAGGGTGTCACTG | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFISSSLR*LQRVSL Trigger: CAGTGACACCCTCTGCAGGCAGCGGAGGGAGCTGGA...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATCGCCCAAGCCCTCTCTaGTCCCTCAGCTCTGCCTCT | + |
Preference number: 4 (lower is better) Translates to: LLSAVTDPSSGLCGGLRDRPSPL*SLSSAS Trigger: AGAGGCAGAGCTGAGGGAGCAGAGAGGGCTTGGGCG...ATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTGCCTGCAGATCACCCTaGCTCCAACCAGCCTCAGGC | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFIACRSP*LQPASG Trigger: GCCTGAGGCTGGTTGGAGCCAGGGTGATCTGCAGGC...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTCTAGGTGGGGCCCAGTaGAAGCCTTGGGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFILGGAQ*KPWGLG Trigger: ACCAAGCCCCCAAGGCTTCCACTGGGCCCCACCTAG...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGCCTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGACTTTCCTTGCCTCTaGAGCCGGGTCTGTGGCTCG | + |
Preference number: 4 (lower is better) Translates to: SLLSAVTDPSSGLCGGLRDFPCL*SRVCGS Trigger: CGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTC...CCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATAGTGACCTCGGGGACTaGTGGCCAAGGAAGACGCGT | + |
Preference number: 4 (lower is better) Translates to: LLSAVTDPSSGLCGGLRDSDLGD*WPRKTR Trigger: ACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGTCACT...ATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTCCAGCTCCCTCCGCTaGCTGCAGAGGGTGTCACTG | + |
Preference number: 4 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFSSSLR*LQRVSL Trigger: CAGTGACACCCTCTGCAGGCAGCGGAGGGAGCTGGA...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTCAGGTGTGGATGCCCTaGCCACCTGCAGCCCCTCTC | + |
Preference number: 4 (lower is better) Translates to: RLGLARVEWQVPKQSLLSQVWMP*PPAAPL Trigger: GAGAGGGGCTGCAGGTGGGCAGGGCATCCACACCTG...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTCAGGTGTGGATGCCCTaGCCACCTGCAGCCCCTCTC | + |
Preference number: 4 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSQVWMP*PPAAPL Trigger: GAGAGGGGCTGCAGGTGGGCAGGGCATCCACACCTG...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTCCAGTCAGGTGTGGATaGCCTGCCCACCTGCAGCCC | + |
Preference number: 4 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSPVRCG*PAHLQP Trigger: GGGCTGCAGGTGGGCAGGGCATCCACACCTGACTGG...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTACCAGTCAGGTGTGGATaGCCTGCCCACCTGCAGCCC | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVPVRCG*PAHLQP Trigger: GGGCTGCAGGTGGGCAGGGCATCCACACCTGACTGG...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGCCTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGATGCAGCCTGGAGTGTaGCCACTGTGCCACCTTTCC | + |
Preference number: 4 (lower is better) Translates to: SLLSAVTDPSSGLCGGLRMQPGV*PLCHLS Trigger: GGAAAGGTGGCACAGTGGCCACACTCCAGGCTGCAT...CCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
||
CDS-3UTR CCA 90 bp | CTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATTCTGCCTCTCGCTCCTaGGCCAGCCTGATCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: LLSAVTDPSSGLCGGLRDSASRS*ASLISL Trigger: GAGAGAGATCAGGCTGGCCCAGGAGCGAGAGGCAGA...ATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | TCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATGTGACTTTCCTTGCCTCTaGAGCCGGGTCTGTGGCTCG | + |
Preference number: 4 (lower is better) Translates to: SFCSDRSKLWAVRRAEGCDFPCL*SRVCGS Trigger: CGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTC...ACATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACCCAGTACCAAGCTGGTaGCACGTGCTGAGCGGGGGT | + |
Preference number: 4 (lower is better) Translates to: VGKSGMAGPQTEPSFCSDPVPSW*HVLSGG Trigger: ACCCCCGCTCAGCACGTGTCACCAGCTTGGTACTGG...GTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAAGGTCTCCCTGGCTGTaGGGCCGCAGGGGACCGGGT | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATRSPWL*GRRGPG Trigger: ACCCGGTCCCCTGCGGCCTCACAGCCAGGGAGACCT...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCCCTTGGGGGCTTGGTTaGTGCCTGGTGGGGTTCGTG | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSPWGLG*CLVGFV Trigger: CACGAACCCCACCAGGCATCAACCAAGCCCCCAAGG...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCATCTGTACCAGCTCTTaGTGCCCGGCAGCTCGCCCA | + |
Preference number: 4 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFICTSS*CPAARP Trigger: TGGGCGAGCTGCCGGGCATCAAGAGCTGGTACAGAT...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
||
CDS-3UTR GCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCTCCCTCCGCTGCCTaGAGAGGGTGTCACTGCTGT | + |
Preference number: 4 (lower is better) Translates to: RLGLARVEWQVPKQSLLSAPSAA*RGCHCC Trigger: ACAGCAGTGACACCCTCTGCAGGCAGCGGAGGGAGC...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCGCCCAAGCCCTCTCTaGTCCCTCAGCTCTGCCTCT | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTERPSPL*SLSSAS Trigger: AGAGGCAGAGCTGAGGGAGCAGAGAGGGCTTGGGCG...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCGCCAGTGATGCCAGATaGCCGGGAGGAACTCCGGGA | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSASDAR*PGGTPG Trigger: TCCCGGAGTTCCTCCCGGGCATCTGGCATCACTGGC...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGGCCTGGTGGGGTTCGTaGGAAGGTCTCCCTGGCTGT | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTEAWWGS*EGLPGC Trigger: ACAGCCAGGGAGACCTTCCCACGAACCCCACCAGGC...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTGCCTGGTGGGGTTCGTaGGAAGGTCTCCCTGGCTGT | + |
Preference number: 4 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSAWWGS*EGLPGC Trigger: ACAGCCAGGGAGACCTTCCCACGAACCCCACCAGGC...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCCTAGGTGGGGCCCAGTaGAAGCCTTGGGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSLGGAQ*KPWGLG Trigger: ACCAAGCCCCCAAGGCTTCCACTGGGCCCCACCTAG...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATCGATGGGCGTCTCTTTaGGGGTCTCAGGGGATTCTG | + |
Preference number: 4 (lower is better) Translates to: LLSAVTDPSSGLCGGLRDRWASL*GSQGIL Trigger: CAGAATCCCCTGAGACCCCCAAAGAGACGCCCATCG...ATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | TCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATGTGCCTTGGAGACTCCGTaGCCTTCTGGAAGACTGTGG | + |
Preference number: 4 (lower is better) Translates to: SFCSDRSKLWAVRRAEGCALETP*PSGRLW Trigger: CCACAGTCTTCCAGAAGGCCACGGAGTCTCCAAGGC...ACATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTGAGGTCCCCATGGTCTaGTGCAGCCTGGAGTGTGGC | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCEVPMV*CSLECG Trigger: GCCACACTCCAGGCTGCATCAGACCATGGGGACCTC...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTGCTCCTGGGCCAGCCTaGTCTCTCTCTCGATGGGCG | + |
Preference number: 4 (lower is better) Translates to: PGKTKSTAGHKHQPGLYVAPGPA*SLSRWA Trigger: CGCCCATCGAGAGAGAGATCAGGCTGGCCCAGGAGC...AACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCCCAGTGGGATCCGGTTaGCTTTCCTTGCCTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFPVGSG*LSLPLE Trigger: CTCCAGAGGCAAGGAAAGTCAACCGGATCCCACTGG...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | TTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACCTCGGGGACTaGTGGCCAAGGAAGACGCGT | + |
Preference number: 4 (lower is better) Translates to: FGVGKSGMAGPQTEPSFCSDLGD*WPRKTR Trigger: ACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGTCACT...GCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTAAGTGACCTCGGGGACTaGTGGCCAAGGAAGACGCGT | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVSDLGD*WPRKTR Trigger: ACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGTCACT...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACGGTCTCAGGGGATTCTaGCTGGGTCTGACTGCCAGG | + |
Preference number: 4 (lower is better) Translates to: VGKSGMAGPQTEPSFCSDGLRGF*LGLTAR Trigger: CCTGGCAGTCAGACCCAGGCAGAATCCCCTGAGACC...GTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | TTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCGGTCTCAGGGGATTCTaGCTGGGTCTGACTGCCAGG | + |
Preference number: 4 (lower is better) Translates to: FGVGKSGMAGPQTEPSFCGLRGF*LGLTAR Trigger: CCTGGCAGTCAGACCCAGGCAGAATCCCCTGAGACC...GCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTGAGGATTCTGAGACATaGCTTGGAGACTCCGTGGCC | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFIEDSET*LGDSVA Trigger: GGCCACGGAGTCTCCAAGGCATGTCTCAGAATCCTC...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTGCCAGTGATGCCAGATaGCCGGGAGGAACTCCGGGA | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCASDAR*PGGTPG Trigger: TCCCGGAGTTCCTCCCGGGCATCTGGCATCACTGGC...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCCGATGGGCGTCTCTTTaGGGGTCTCAGGGGATTCTG | + |
Preference number: 4 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFRWASL*GSQGIL Trigger: CAGAATCCCCTGAGACCCCCAAAGAGACGCCCATCG...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGTCTGCCTCTCGCTCCTaGGCCAGCCTGATCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTESASRS*ASLISL Trigger: GAGAGAGATCAGGCTGGCCCAGGAGCGAGAGGCAGA...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CAACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGACCCCTGGGGGACATCTaGGACCTTGAATCGCAGTGG | + |
Preference number: 4 (lower is better) Translates to: QQAYVWGWQEWNGRSPNRPLGDI*DLESQW Trigger: CCACTGCGATTCAAGGTCCCAGATGTCCCCCAGGGG...TCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTAGCTCTCATCCTCGGCTaGCACTGGGGAGAACACCTC | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVALILG*HWGEHL Trigger: GAGGTGTTCTCCCCAGTGCCAGCCGAGGATGAGAGC...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACCAGTACCAAGCTGGTaGCACGTGCTGAGCGGGGGT | + |
Preference number: 4 (lower is better) Translates to: PLLQAGSSGQVYFIATGIPVPSW*HVLSGG Trigger: ACCCCCGCTCAGCACGTGTCACCAGCTTGGTACTGG...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | AGGCCACAAACATCAGCCTGGGCTGTATGTTTAAATAGGGACAGCAGAGACTGGGAGGTCCCCATGGTCTaGTGCAGCCTGGAGTGTGGC | + |
Preference number: 4 (lower is better) Translates to: RPQTSAWAVCLNRDSRDWEVPMV*CSLECG Trigger: GCCACACTCCAGGCTGCATCAGACCATGGGGACCTC...CCAGTCTCTGCTGTCCCTATTTAAACATACAGCCCAGGCTGATGTTTGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTATCTGTACCAGCTCTTaGTGCCCGGCAGCTCGCCCA | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCICTSS*CPAARP Trigger: TGGGCGAGCTGCCGGGCATCAAGAGCTGGTACAGAT...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCTCAAGCTCATCTTGCTaGGCAGTGGCCTGCTGGGGA | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSSSSSC*AVACWG Trigger: TCCCCAGCAGGCCACTGCTCAGCAAGATGAGCTTGA...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGTCAAGCTCATCTTGCTaGGCAGTGGCCTGCTGGGGA | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTESSSSC*AVACWG Trigger: TCCCCAGCAGGCCACTGCTCAGCAAGATGAGCTTGA...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATCAAGCTCATCTTGCTaGGCAGTGGCCTGCTGGGGA | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVSSSSC*AVACWG Trigger: TCCCCAGCAGGCCACTGCTCAGCAAGATGAGCTTGA...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTCTCGGGCATCTGGGCTaGGGATGCAATCGGAGCTCA | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCLGHLG*GCNRSS Trigger: TGAGCTCCGATTGCATCCTCAGCCCAGATGCCCGAG...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTCCAGTGGGATCCGGTTaGCTTTCCTTGCCTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: RLGLARVEWQVPKQSLLSPVGSG*LSLPLE Trigger: CTCCAGAGGCAAGGAAAGTCAACCGGATCCCACTGG...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCCCAGTGGGATCCGGTTaGCTTTCCTTGCCTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSPVGSG*LSLPLE Trigger: CTCCAGAGGCAAGGAAAGTCAACCGGATCCCACTGG...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTCTGCCGGAGGATTCTaGGACATGCCTTGGAGACTC | + |
Preference number: 4 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFSAGGF*DMPWRL Trigger: GAGTCTCCAAGGCATGTCTCAGAATCCTCCGGCAGA...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | TCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATGTGGCTTGGACCACTCTTaGTTTGAGCTCAGCGATCTG | + |
Preference number: 4 (lower is better) Translates to: SFCSDRSKLWAVRRAEGCGLDHS*FELSDL Trigger: CAGATCGCTGAGCTCAAAGCAAGAGTGGTCCAAGCC...ACATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGTCCTTCCTAGTCTTCTaGCCTGGGGGAGCACTGTCC | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTESFLVF*PGGALS Trigger: GGACAGTGCTCCCCCAGGGCAGAAGACTAGGAAGGA...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACTCCTTCCTAGTCTTCTaGCCTGGGGGAGCACTGTCC | + |
Preference number: 4 (lower is better) Translates to: VGKSGMAGPQTEPSFCSDSFLVF*PGGALS Trigger: GGACAGTGCTCCCCCAGGGCAGAAGACTAGGAAGGA...GTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
||
CDS-3UTR GCA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTCCTTCCTAGTCTTCTaGCCTGGGGGAGCACTGTCC | + |
Preference number: 4 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSSFLVF*PGGALS Trigger: GGACAGTGCTCCCCCAGGGCAGAAGACTAGGAAGGA...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTGCCTGCAGATCACCCTaGCTCCAACCAGCCTCAGGC | + |
Preference number: 4 (lower is better) Translates to: PGKTKSTAGHKHQPGLYVACRSP*LQPASG Trigger: GCCTGAGGCTGGTTGGAGCCAGGGTGATCTGCAGGC...AACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATAGCCTGCAGATCACCCTaGCTCCAACCAGCCTCAGGC | + |
Preference number: 4 (lower is better) Translates to: PLLQAGSSGQVYFIATGIACRSP*LQPASG Trigger: GCCTGAGGCTGGTTGGAGCCAGGGTGATCTGCAGGC...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTCCTTTCCTGACTGCCTaGCTCTGGATGACTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: RLGLARVEWQVPKQSLLSPFLTA*LWMTAQ Trigger: CTGGGCAGTCATCCAGAGCCAGGCAGTCAGGAAAGG...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCCCTTTCCTGACTGCCTaGCTCTGGATGACTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSPFLTA*LWMTAQ Trigger: CTGGGCAGTCATCCAGAGCCAGGCAGTCAGGAAAGG...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGGCCACAAACATCAGCCTGGGCTGTATGTTTAAATAGGGACAGCAGAGACTGGGCCTGGTGGGGTTCGTaGGAAGGTCTCCCTGGCTGT | + |
Preference number: 4 (lower is better) Translates to: RPQTSAWAVCLNRDSRDWAWWGS*EGLPGC Trigger: ACAGCCAGGGAGACCTTCCCACGAACCCCACCAGGC...CCAGTCTCTGCTGTCCCTATTTAAACATACAGCCCAGGCTGATGTTTGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTGGCTTGGTTGATGCCTaGTGGGGTTCGTGGGAAGGT | + |
Preference number: 4 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSGLVDA*WGSWEG Trigger: ACCTTCCCACGAACCCCACCAGGCATCAACCAAGCC...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGAAGCCTTGGGGGCTTaGTTGATGCCTGGTGGGGTT | + |
Preference number: 4 (lower is better) Translates to: RLGLARVEWQVPKQSLLSEALGA*LMPGGV Trigger: AACCCCACCAGGCATCAACCAAGCCCCCAAGGCTTC...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCCGATGGGCGTCTCTTTaGGGGTCTCAGGGGATTCTG | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSRWASL*GSQGIL Trigger: CAGAATCCCCTGAGACCCCCAAAGAGACGCCCATCG...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTCTGCCTCTCGCTCCTaGGCCAGCCTGATCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCSASRS*ASLISL Trigger: GAGAGAGATCAGGCTGGCCCAGGAGCGAGAGGCAGA...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTCTGGTAGGCATCCAGTaGGATCCGGTTGACTTTCCT | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFILVGIQ*DPVDFP Trigger: AGGAAAGTCAACCGGATCCCACTGGATGCCTACCAG...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CAACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTGGAGACTCCGTaGCCTTCTGGAAGACTGTGG | + |
Preference number: 4 (lower is better) Translates to: QQAYVWGWQEWNGRSPNRALETP*PSGRLW Trigger: CCACAGTCTTCCAGAAGGCCACGGAGTCTCCAAGGC...TCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CAACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAATCCTCGGCTGGCACTaGGGAGAACACCTCTGGGAA | + |
Preference number: 4 (lower is better) Translates to: QQAYVWGWQEWNGRSPNRILGWH*GEHLWE Trigger: TTCCCAGAGGTGTTCTCCCCAGTGCCAGCCGAGGAT...TCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTAATCCTCGGCTGGCACTaGGGAGAACACCTCTGGGAA | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVILGWH*GEHLWE Trigger: TTCCCAGAGGTGTTCTCCCCAGTGCCAGCCGAGGAT...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACGTTGTCTGGCAATCCTaGGGTCCCCATGGTCTGATG | + |
Preference number: 4 (lower is better) Translates to: VGKSGMAGPQTEPSFCSDVVWQS*GPHGLM Trigger: CATCAGACCATGGGGACCTCAGGATTGCCAGACAAC...GTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTAGTTGTCTGGCAATCCTaGGGTCCCCATGGTCTGATG | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVVVWQS*GPHGLM Trigger: CATCAGACCATGGGGACCTCAGGATTGCCAGACAAC...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCGTTGTCTGGCAATCCTaGGGTCCCCATGGTCTGATG | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSVVWQS*GPHGLM Trigger: CATCAGACCATGGGGACCTCAGGATTGCCAGACAAC...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACACGCCCAAGCCCTCTCTaGTCCCTCAGCTCTGCCTCT | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATRPSPL*SLSSAS Trigger: AGAGGCAGAGCTGAGGGAGCAGAGAGGGCTTGGGCG...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTAGAGGATTCTGAGACATaGCTTGGAGACTCCGTGGCC | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVEDSET*LGDSVA Trigger: GGCCACGGAGTCTCCAAGGCATGTCTCAGAATCCTC...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGCCAGTGATGCCAGATaGCCGGGAGGAACTCCGGGA | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATASDAR*PGGTPG Trigger: TCCCGGAGTTCCTCCCGGGCATCTGGCATCACTGGC...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCATCCTGAGGTCCCCATaGTCTGATGCAGCCTGGAGT | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSILRSP*SDAAWS Trigger: ACTCCAGGCTGCATCAGACCATGGGGACCTCAGGAT...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | TTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCATCCTGAGGTCCCCATaGTCTGATGCAGCCTGGAGT | + |
Preference number: 4 (lower is better) Translates to: FGVGKSGMAGPQTEPSFCILRSP*SDAAWS Trigger: ACTCCAGGCTGCATCAGACCATGGGGACCTCAGGAT...GCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTGGTTGATGCCTGGTaGGGTTCGTGGGAAGGTCTC | + |
Preference number: 4 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSLVDAW*GSWEGL Trigger: GAGACCTTCCCACGAACCCCACCAGGCATCAACCAA...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGTTGGTTGATGCCTGGTaGGGTTCGTGGGAAGGTCTC | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTELVDAW*GSWEGL Trigger: GAGACCTTCCCACGAACCCCACCAGGCATCAACCAA...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTGGCTTGGTTGATGCCTaGTGGGGTTCGTGGGAAGGT | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCGLVDA*WGSWEG Trigger: ACCTTCCCACGAACCCCACCAGGCATCAACCAAGCC...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTACATCTTGCTGAGCAGTaGCCTGCTGGGGATCTGTAC | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVHLAEQ*PAGDLY Trigger: GTACAGATCCCCAGCAGGCCACTGCTCAGCAAGATG...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCATCTTGCTGAGCAGTaGCCTGCTGGGGATCTGTAC | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTEHLAEQ*PAGDLY Trigger: GTACAGATCCCCAGCAGGCCACTGCTCAGCAAGATG...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCCTTTGGTGTCTTCGGTaGAGACACCACTTGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFLWCLR*RHHLAC Trigger: GCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAG...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTGGGGAGAACACCTCTaGGAAGAAAGCATTCCTCCG | + |
Preference number: 4 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFWGEHL*EESIPP Trigger: CGGAGGAATGCTTTCTTCCCAGAGGTGTTCTCCCCA...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGGCCACAAACATCAGCCTGGGCTGTATGTTTAAATAGGGACAGCAGAGACTGGGCTCTCATCCTCGGCTaGCACTGGGGAGAACACCTC | + |
Preference number: 4 (lower is better) Translates to: RPQTSAWAVCLNRDSRDWALILG*HWGEHL Trigger: GAGGTGTTCTCCCCAGTGCCAGCCGAGGATGAGAGC...CCAGTCTCTGCTGTCCCTATTTAAACATACAGCCCAGGCTGATGTTTGTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATAGCTCTCATCCTCGGCTaGCACTGGGGAGAACACCTC | + |
Preference number: 4 (lower is better) Translates to: PLLQAGSSGQVYFIATGIALILG*HWGEHL Trigger: GAGGTGTTCTCCCCAGTGCCAGCCGAGGATGAGAGC...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTCTGCCGGAGGATTCTaGGACATGCCTTGGAGACTC | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCSAGGF*DMPWRL Trigger: GAGTCTCCAAGGCATGTCTCAGAATCCTCCGGCAGA...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | GTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACTGCAGAGGGTGTCACTaGTGTCGTCCAGGTGATAAG | + |
Preference number: 4 (lower is better) Translates to: VGKSGMAGPQTEPSFCSDCRGCH*CRPGDK Trigger: CTTATCACCTGGACGACAGCAGTGACACCCTCTGCA...GTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | TCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATGTTCTAAGCTCAGGAATTaGTGTCGAGCAGCCAGGAAA | + |
Preference number: 4 (lower is better) Translates to: SFCSDRSKLWAVRRAEGCSKLRN*CRAARK Trigger: TTTCCTGGCTGCTCGACAGCAATTCCTGAGCTTAGA...ACATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGGCTTGGACCACTCTTaGTTTGAGCTCAGCGATCTG | + |
Preference number: 4 (lower is better) Translates to: RLGLARVEWQVPKQSLLSGLDHS*FELSDL Trigger: CAGATCGCTGAGCTCAAAGCAAGAGTGGTCCAAGCC...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGGCCACAAACATCAGCCTGGGCTGTATGTTTAAATAGGGACAGCAGAGACTGGCCTTTCCTGACTGCCTaGCTCTGGATGACTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: RPQTSAWAVCLNRDSRDWPFLTA*LWMTAQ Trigger: CTGGGCAGTCATCCAGAGCCAGGCAGTCAGGAAAGG...CCAGTCTCTGCTGTCCCTATTTAAACATACAGCCCAGGCTGATGTTTGTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATAATGCAGCCTGGAGTGTaGCCACTGTGCCACCTTTCC | + |
Preference number: 4 (lower is better) Translates to: PLLQAGSSGQVYFIATGIMQPGV*PLCHLS Trigger: GGAAAGGTGGCACAGTGGCCACACTCCAGGCTGCAT...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCCTGGTAGGCATCCAGTaGGATCCGGTTGACTTTCCT | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSLVGIQ*DPVDFP Trigger: AGGAAAGTCAACCGGATCCCACTGGATGCCTACCAG...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | TTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCCTTTGGTGTCTTCGGTaGAGACACCACTTGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: FGVGKSGMAGPQTEPSFCLWCLR*RHHLAC Trigger: GCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAG...GCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCGGAAGACTGTGGCTTTaGTGTCTTCGGTGGAGACAC | + |
Preference number: 4 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSGRLWL*CLRWRH Trigger: GTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCC...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTAGGAAGACTGTGGCTTTaGTGTCTTCGGTGGAGACAC | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVGRLWL*CLRWRH Trigger: GTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCC...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACACCCCTGGGGGACATCTaGGACCTTGAATCGCAGTGG | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATPLGDI*DLESQW Trigger: CCACTGCGATTCAAGGTCCCAGATGTCCCCCAGGGG...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGTTTGTAGCCTCAATATaGGGCCTCCAGCCACTTCCC | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTEFVASI*GLQPLP Trigger: GGGAAGTGGCTGGAGGCCCCATATTGAGGCTACAAA...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGGCCACAAACATCAGCCTGGGCTGTATGTTTAAATAGGGACAGCAGAGACTGGATCCTCGGCTGGCACTaGGGAGAACACCTCTGGGAA | + |
Preference number: 4 (lower is better) Translates to: RPQTSAWAVCLNRDSRDWILGWH*GEHLWE Trigger: TTCCCAGAGGTGTTCTCCCCAGTGCCAGCCGAGGAT...CCAGTCTCTGCTGTCCCTATTTAAACATACAGCCCAGGCTGATGTTTGTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATATCTGCCGGAGGATTCTaGGACATGCCTTGGAGACTC | + |
Preference number: 4 (lower is better) Translates to: PLLQAGSSGQVYFIATGISAGGF*DMPWRL Trigger: GAGTCTCCAAGGCATGTCTCAGAATCCTCCGGCAGA...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGCCTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGTGTTCTCTTTACATCTaGTCTGGTCTGGTACTCAGT | + |
Preference number: 4 (lower is better) Translates to: SLLSAVTDPSSGLCGGLRCSLYI*SGLVLS Trigger: ACTGAGTACCAGACCAGACCAGATGTAAAGAGAACA...CCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTTTGGTTGATGCCTGGTaGGGTTCGTGGGAAGGTCTC | + |
Preference number: 4 (lower is better) Translates to: PGKTKSTAGHKHQPGLYVLVDAW*GSWEGL Trigger: GAGACCTTCCCACGAACCCCACCAGGCATCAACCAA...AACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCTTGGTTGATGCCTaGTGGGGTTCGTGGGAAGGT | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATGLVDA*WGSWEG Trigger: ACCTTCCCACGAACCCCACCAGGCATCAACCAAGCC...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGAAGCCTTGGGGGCTTaGTTGATGCCTGGTGGGGTT | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATEALGA*LMPGGV Trigger: AACCCCACCAGGCATCAACCAAGCCCCCAAGGCTTC...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTTGGCAAGACTAGGTGGGGCCCAGTaGAAGCCTTGGGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: SSGQVYFIATGIRLGLARLGGAQ*KPWGLG Trigger: ACCAAGCCCCCAAGGCTTCCACTGGGCCCCACCTAG...TCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACCTAGCTGGGGAAACATaGAAAGACTTCTCCAGGGTC | + |
Preference number: 4 (lower is better) Translates to: VGKSGMAGPQTEPSFCSDLAGET*KDFSRV Trigger: GACCCTGGAGAAGTCTTTCCATGTTTCCCCAGCTAG...GTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTGGAAGACTGTGGCTTTaGTGTCTTCGGTGGAGACAC | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCGRLWL*CLRWRH Trigger: GTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCC...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTCCTTCTGGAAGACTGTaGCTTTGGTGTCTTCGGTGG | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCPSGRL*LWCLRW Trigger: CCACCGAAGACACCAAAGCCACAGTCTTCCAGAAGG...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGCCTTGGAGACTCCGTaGCCTTCTGGAAGACTGTGG | + |
Preference number: 4 (lower is better) Translates to: APGRQFRTGLFHSNRHTFALETP*PSGRLW Trigger: CCACAGTCTTCCAGAAGGCCACGGAGTCTCCAAGGC...AAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTTTGTAGCCTCAATATaGGGCCTCCAGCCACTTCCC | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCFVASI*GLQPLP Trigger: GGGAAGTGGCTGGAGGCCCCATATTGAGGCTACAAA...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCAGTTTTCATCCTCGCTaGCATAGATGTGTGCTTCCC | + |
Preference number: 4 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFSFHPR*HRCVLP Trigger: GGGAAGCACACATCTATGCCAGCGAGGATGAAAACT...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | AGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTTGGCAAGAATCTGTACCAGCTCTTaGTGCCCGGCAGCTCGCCCA | + |
Preference number: 4 (lower is better) Translates to: SSGQVYFIATGIRLGLARICTSS*CPAARP Trigger: TGGGCGAGCTGCCGGGCATCAAGAGCTGGTACAGAT...TCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR TCA 90 bp | AGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTTGGCAAGACTCGGGCATCTGGGCTaGGGATGCAATCGGAGCTCA | + |
Preference number: 4 (lower is better) Translates to: SSGQVYFIATGIRLGLARLGHLG*GCNRSS Trigger: TGAGCTCCGATTGCATCCTCAGCCCAGATGCCCGAG...TCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTCTAAGCTCAGGAATTaGTGTCGAGCAGCCAGGAAA | + |
Preference number: 4 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSSKLRN*CRAARK Trigger: TTTCCTGGCTGCTCGACAGCAATTCCTGAGCTTAGA...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGAGGATTCTGAGACATaGCTTGGAGACTCCGTGGCC | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATEDSET*LGDSVA Trigger: GGCCACGGAGTCTCCAAGGCATGTCTCAGAATCCTC...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | AGGCCACAAACATCAGCCTGGGCTGTATGTTTAAATAGGGACAGCAGAGACTGGGGCTTGGACCACTCTTaGTTTGAGCTCAGCGATCTG | + |
Preference number: 4 (lower is better) Translates to: RPQTSAWAVCLNRDSRDWGLDHS*FELSDL Trigger: CAGATCGCTGAGCTCAAAGCAAGAGTGGTCCAAGCC...CCAGTCTCTGCTGTCCCTATTTAAACATACAGCCCAGGCTGATGTTTGTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTATGGATGGATCTAGCTaGGGAAACATGGAAAGACTT | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFIMDGSS*GNMERL Trigger: AAGTCTTTCCATGTTTCCCCAGCTAGATCCATCCAT...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTGGATCATTGACTATATaGATGGATCTAGCTGGGGAA | + |
Preference number: 4 (lower is better) Translates to: GCLRHILCSRQAVQDRFIGSLTI*MDLAGE Trigger: TTCCCCAGCTAGATCCATCCATATAGTCAATGATCC...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACACATCTTGCTGAGCAGTaGCCTGCTGGGGATCTGTAC | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATHLAEQ*PAGDLY Trigger: GTACAGATCCCCAGCAGGCCACTGCTCAGCAAGATG...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTCTGGTAGGCATCCAGTaGGATCCGGTTGACTTTCCT | + |
Preference number: 4 (lower is better) Translates to: PGKTKSTAGHKHQPGLYVLVGIQ*DPVDFP Trigger: AGGAAAGTCAACCGGATCCCACTGGATGCCTACCAG...AACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGGGTGGAGACACCACTTaGCTTGCTGTATACTCCAAA | + |
Preference number: 4 (lower is better) Translates to: NRHTFGVGKSGMAGPQTEGGDTT*LAVYSK Trigger: TTTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACC...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATATTTGTAGCCTCAATATaGGGCCTCCAGCCACTTCCC | + |
Preference number: 4 (lower is better) Translates to: PLLQAGSSGQVYFIATGIFVASI*GLQPLP Trigger: GGGAAGTGGCTGGAGGCCCCATATTGAGGCTACAAA...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATATGGGGAGAACACCTCTaGGAAGAAAGCATTCCTCCG | + |
Preference number: 4 (lower is better) Translates to: PLLQAGSSGQVYFIATGIWGEHL*EESIPP Trigger: CGGAGGAATGCTTTCTTCCCAGAGGTGTTCTCCCCA...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTAAGTTTTCATCCTCGCTaGCATAGATGTGTGCTTCCC | + |
Preference number: 4 (lower is better) Translates to: HPRENQINCRPQTSAWAVSFHPR*HRCVLP Trigger: GGGAAGCACACATCTATGCCAGCGAGGATGAAAACT...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTAGTTTTCATCCTCGCTaGCATAGATGTGTGCTTCCC | + |
Preference number: 4 (lower is better) Translates to: RLGLARVEWQVPKQSLLSSFHPR*HRCVLP Trigger: GGGAAGCACACATCTATGCCAGCGAGGATGAAAACT...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACTAGCTGGGGAAACATaGAAAGACTTCTCCAGGGTC | + |
Preference number: 4 (lower is better) Translates to: PLLQAGSSGQVYFIATGILAGET*KDFSRV Trigger: GACCCTGGAGAAGTCTTTCCATGTTTCCCCAGCTAG...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTCCTTCTGGAAGACTGTaGCTTTGGTGTCTTCGGTGG | + |
Preference number: 4 (lower is better) Translates to: APGRQFRTGLFHSNRHTFPSGRL*LWCLRW Trigger: CCACCGAAGACACCAAAGCCACAGTCTTCCAGAAGG...AAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | GCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTTGGGGAGAACACCTCTaGGAAGAAAGCATTCCTCCG | + |
Preference number: 4 (lower is better) Translates to: APGRQFRTGLFHSNRHTFWGEHL*EESIPP Trigger: CGGAGGAATGCTTTCTTCCCAGAGGTGTTCTCCCCA...AAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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3UTR CAA 72 bp | CAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTaGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGC | + |
Preference number: 4 (lower is better) Translates to: QVYFIATGIRLG*ARVEWQVPKQS Trigger: GCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CAACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAATGGATGGATCTAGCTaGGGAAACATGGAAAGACTT | + |
Preference number: 4 (lower is better) Translates to: QQAYVWGWQEWNGRSPNRMDGSS*GNMERL Trigger: AAGTCTTTCCATGTTTCCCCAGCTAGATCCATCCAT...TCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | AGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTTGGCAAGATGCAGAGGGTGTCACTaGTGTCGTCCAGGTGATAAG | + |
Preference number: 4 (lower is better) Translates to: SSGQVYFIATGIRLGLARCRGCH*CRPGDK Trigger: CTTATCACCTGGACGACAGCAGTGACACCCTCTGCA...TCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR GCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACATCTAAGCTCAGGAATTaGTGTCGAGCAGCCAGGAAA | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATSKLRN*CRAARK Trigger: TTTCCTGGCTGCTCGACAGCAATTCCTGAGCTTAGA...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTGTTCTCTTTACATCTaGTCTGGTCTGGTACTCAGT | + |
Preference number: 4 (lower is better) Translates to: PRENQINCRPQTSAWAVCCSLYI*SGLVLS Trigger: ACTGAGTACCAGACCAGACCAGATGTAAAGAGAACA...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | ACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGTGGAGACACCACTTaGCTTGCTGTATACTCCAAA | + |
Preference number: 4 (lower is better) Translates to: THPLLQAGSSGQVYFIATGGDTT*LAVYSK Trigger: TTTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACC...TGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | CCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTGGATCATTGACTATATaGATGGATCTAGCTGGGGAA | + |
Preference number: 4 (lower is better) Translates to: PGKTKSTAGHKHQPGLYVGSLTI*MDLAGE Trigger: TTCCCCAGCTAGATCCATCCATATAGTCAATGATCC...AACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTTGGCAAGAGGTGGAGACACCACTTaGCTTGCTGTATACTCCAAA | + |
Preference number: 4 (lower is better) Translates to: SSGQVYFIATGIRLGLARGGDTT*LAVYSK Trigger: TTTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACC...TCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTTGGCAAGAATGGATGGATCTAGCTaGGGAAACATGGAAAGACTT | + |
Preference number: 4 (lower is better) Translates to: SSGQVYFIATGIRLGLARMDGSS*GNMERL Trigger: AAGTCTTTCCATGTTTCCCCAGCTAGATCCATCCAT...TCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CCA 90 bp | AGTTCAGGACAGGTTTATTTCATAGCAACAGGCATACGTTTGGGGTTGGCAAGAGGATCATTGACTATATaGATGGATCTAGCTGGGGAA | + |
Preference number: 4 (lower is better) Translates to: SSGQVYFIATGIRLGLARGSLTI*MDLAGE Trigger: TTCCCCAGCTAGATCCATCCATATAGTCAATGATCC...TCTTGCCAACCCCAAACGTATGCCTGTTGCTATGAAATAAACCTGTCCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | GCCTGGAGTGTGGCCACTGTGCCACCTTTCCTGACTGCCTGGCTCTaGATGACTGCCCAGCGCTCAGCCTCCAGCTCCCTCCGCTGCCTG | + |
Preference number: 5 (lower is better) Translates to: AWSVATVPPFLTAWL*MTAQRSASSSLRCL Trigger: CAGGCAGCGGAGGGAGCTGGAGGCTGAGCGCTGGGCAGTCATCCAGAGCCAGGCAGTCAGGAAAGGTGGCACAGTGGCCACACTCCAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS TCA 90 bp | GGGCTGAGGATGCAATCGGAGCTCAGGCTTCTCTGGAGCCCAGGCTaGGGGTCCTGGGAAGGCCAGTCAGGTGTGGATGCCCTGCCCACC | + |
Preference number: 5 (lower is better) Translates to: GLRMQSELRLLWSPG*GSWEGQSGVDALPT Trigger: GGTGGGCAGGGCATCCACACCTGACTGGCCTTCCCAGGACCCTCAGCCTGGGCTCCAGAGAAGCCTGAGCTCCGATTGCATCCTCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 90 bp | CTGGAGCCCAGGCTGAGGGTCCTGGGAAGGCCAGTCAGGTGTGGATaGCCTGCCCACCTGCAGCCCCTCTCGTCGATGATCTTCTTCCCG | + |
Preference number: 5 (lower is better) Translates to: LEPRLRVLGRPVRCG*PAHLQPLSSMIFFP Trigger: CGGGAAGAAGATCATCGACGAGAGGGGCTGCAGGTGGGCAGGGCATCCACACCTGACTGGCCTTCCCAGGACCCTCAGCCTGGGCTCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | GCTCGCCCAAGCCCTCTCTGCTCCCTCAGCTCTGCCTCTCGCTCCTaGGCCAGCCTGATCTCTCTCTCGATGGGCGTCTCTTTGGGGGTC | + |
Preference number: 5 (lower is better) Translates to: ARPSPLCSLSSASRS*ASLISLSMGVSLGV Trigger: GACCCCCAAAGAGACGCCCATCGAGAGAGAGATCAGGCTGGCCCAGGAGCGAGAGGCAGAGCTGAGGGAGCAGAGAGGGCTTGGGCGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 90 bp | GCCCTCTCTGCTCCCTCAGCTCTGCCTCTCGCTCCTGGGCCAGCCTaGTCTCTCTCTCGATGGGCGTCTCTTTGGGGGTCTCAGGGGATT | + |
Preference number: 5 (lower is better) Translates to: ALSAPSALPLAPGPA*SLSRWASLWGSQGI Trigger: AATCCCCTGAGACCCCCAAAGAGACGCCCATCGAGAGAGAGATCAGGCTGGCCCAGGAGCGAGAGGCAGAGCTGAGGGAGCAGAGAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 90 bp | CTTTCCTTGCCTCTGGAGCCGGGTCTGTGGCTCGGGCATCTGGGCTaGGGATGCAATCGGAGCTCAGGCTTCTCTGGAGCCCAGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: LSLPLEPGLWLGHLG*GCNRSSGFSGAQAE Trigger: CTCAGCCTGGGCTCCAGAGAAGCCTGAGCTCCGATTGCATCCTCAGCCCAGATGCCCGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGTCGATGGGCGTCTCTTaGGGGGTCTCAGGGGATTCT | + |
Preference number: 5 (lower is better) Translates to: AETGGRSSGLHRTAVRQESMGVS*GVSGDS Trigger: AGAATCCCCTGAGACCCCCAAAGAGACGCCCATCGA...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 90 bp | CTCATCTTGCTGAGCAGTGGCCTGCTGGGGATCTGTACCAGCTCTTaGTGCCCGGCAGCTCGCCCAAGCCCTCTCTGCTCCCTCAGCTCT | + |
Preference number: 5 (lower is better) Translates to: LILLSSGLLGICTSS*CPAARPSPLCSLSS Trigger: AGAGCTGAGGGAGCAGAGAGGGCTTGGGCGAGCTGCCGGGCATCAAGAGCTGGTACAGATCCCCAGCAGGCCACTGCTCAGCAAGATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | GTTGACTTTCCTTGCCTCTGGAGCCGGGTCTGTGGCTCGGGCATCTaGGCTGAGGATGCAATCGGAGCTCAGGCTTCTCTGGAGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: VDFPCLWSRVCGSGI*AEDAIGAQASLEPR Trigger: CCTGGGCTCCAGAGAAGCCTGAGCTCCGATTGCATCCTCAGCCCAGATGCCCGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | CCAGTGATGCCAGATGCCCGGGAGGAACTCCGGGAGTCTTGCTCATaGCTCTCATCCTCGGCTGGCACTGGGGAGAACACCTCTGGGAAG | + |
Preference number: 5 (lower is better) Translates to: PVMPDAREELRESCS*LSSSAGTGENTSGK Trigger: CTTCCCAGAGGTGTTCTCCCCAGTGCCAGCCGAGGATGAGAGCCATGAGCAAGACTCCCGGAGTTCCTCCCGGGCATCTGGCATCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 90 bp | TCCCAGGGCCTAGATATGGCTGGTAGGCATCCAGTGGGATCCGGTTaGCTTTCCTTGCCTCTGGAGCCGGGTCTGTGGCTCGGGCATCTG | + |
Preference number: 5 (lower is better) Translates to: SQGLDMAGRHPVGSG*LSLPLEPGLWLGHL Trigger: CAGATGCCCGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTCAACCGGATCCCACTGGATGCCTACCAGCCATATCTAGGCCCTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | TGGCTGGTAGGCATCCAGTGGGATCCGGTTGACTTTCCTTGCCTCTaGAGCCGGGTCTGTGGCTCGGGCATCTGGGCTGAGGATGCAATC | + |
Preference number: 5 (lower is better) Translates to: WLVGIQWDPVDFPCL*SRVCGSGIWAEDAI Trigger: GATTGCATCCTCAGCCCAGATGCCCGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTCAACCGGATCCCACTGGATGCCTACCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | AGCCTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGGAAGCCTTGGGGGCTaGGTTGATGCCTGGTGGGGT | + |
Preference number: 5 (lower is better) Translates to: SLLSAVTDPSSGLCGGLRGSLGG*VDAWWG Trigger: ACCCCACCAGGCATCAACCAAGCCCCCAAGGCTTCC...CCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | GCAGAGACTGGGGGCAGGTCTAGCGGCCTCCACAGGACTGCAGTGAGGCAGGAGTCCGCCAAGAGATTCTaGTGCCGCTTTACCCTTGTG | + |
Preference number: 5 (lower is better) Translates to: AETGGRSSGLHRTAVRQESAKRF*CRFTLV Trigger: CACAAGGGTAAAGCGGCACAAGAATCTCTTGGCGGA...CTCCTGCCTCACTGCAGTCCTGTGGAGGCCGCTAGACCTGCCCCCAGTCTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTGGAAGCCTTGGGGGCTaGGTTGATGCCTGGTGGGGT | + |
Preference number: 5 (lower is better) Translates to: GCLRHILCSRQAVQDRFIGSLGG*VDAWWG Trigger: ACCCCACCAGGCATCAACCAAGCCCCCAAGGCTTCC...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | GGCTGCCTGCGACACATCCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTGGCCCAGTGGAAGCCTaGGGGGCTTGGTTGATGCCT | + |
Preference number: 5 (lower is better) Translates to: GCLRHILCSRQAVQDRFIGPVEA*GAWLMP Trigger: AGGCATCAACCAAGCCCCCAAGGCTTCCACTGGGCC...AATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGGATGTGTCGCAGGCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 90 bp | CAGTCAGGTGTGGATGCCCTGCCCACCTGCAGCCCCTCTCGTCGATaGTCTTCTTCCCGCTGTGTCTCTTGCACCATGTCCCTTTGCACA | + |
Preference number: 5 (lower is better) Translates to: QSGVDALPTCSPSRR*SSSRCVSCTMSLCT Trigger: TGTGCAAAGGGACATGGTGCAAGAGACACAGCGGGAAGAAGATCATCGACGAGAGGGGCTGCAGGTGGGCAGGGCATCCACACCTGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | GTCTCTTCGTGGAGGTGTCTCTGTCAAGCTCATCTTGCTGAGCAGTaGCCTGCTGGGGATCTGTACCAGCTCTTGATGCCCGGCAGCTCG | + |
Preference number: 5 (lower is better) Translates to: VSSWRCLCQAHLAEQ*PAGDLYQLLMPGSS Trigger: CGAGCTGCCGGGCATCAAGAGCTGGTACAGATCCCCAGCAGGCCACTGCTCAGCAAGATGAGCTTGACAGAGACACCTCCACGAAGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | GGAACTCCGGGAGTCTTGCTCATGGCTCTCATCCTCGGCTGGCACTaGGGAGAACACCTCTGGGAAGAAAGCATTCCTCCGCTCTTCAGC | + |
Preference number: 5 (lower is better) Translates to: GTPGVLLMALILGWH*GEHLWEESIPPLFS Trigger: GCTGAAGAGCGGAGGAATGCTTTCTTCCCAGAGGTGTTCTCCCCAGTGCCAGCCGAGGATGAGAGCCATGAGCAAGACTCCCGGAGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTAGCCTTGGGGGCTTGGTaGATGCCTGGTGGGGTTCGT | + |
Preference number: 5 (lower is better) Translates to: HPRENQINCRPQTSAWAVALGAW*MPGGVR Trigger: ACGAACCCCACCAGGCATCAACCAAGCCCCCAAGGC...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CAACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTGGGGGCTTGGTaGATGCCTGGTGGGGTTCGT | + |
Preference number: 5 (lower is better) Translates to: QQAYVWGWQEWNGRSPNRALGAW*MPGGVR Trigger: ACGAACCCCACCAGGCATCAACCAAGCCCCCAAGGC...TCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTGCCTTGGGGGCTTGGTaGATGCCTGGTGGGGTTCGT | + |
Preference number: 5 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSALGAW*MPGGVR Trigger: ACGAACCCCACCAGGCATCAACCAAGCCCCCAAGGC...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTGGAAGCCTTGGGGGCTaGGTTGATGCCTGGTGGGGT | + |
Preference number: 5 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSGSLGG*VDAWWG Trigger: ACCCCACCAGGCATCAACCAAGCCCCCAAGGCTTCC...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | TTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCGGCCCAGTGGAAGCCTaGGGGGCTTGGTTGATGCCT | + |
Preference number: 5 (lower is better) Translates to: FGVGKSGMAGPQTEPSFCGPVEA*GAWLMP Trigger: AGGCATCAACCAAGCCCCCAAGGCTTCCACTGGGCC...GCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | TTCCCGCTGTGTCTCTTGCACCATGTCCCTTTGCACATAGAGGGATaGGCGGCCCCTGTCTCTTCGTGGAGGTGTCTCTGTCAAGCTCAT | + |
Preference number: 5 (lower is better) Translates to: FPLCLLHHVPLHIEG*AAPVSSWRCLCQAH Trigger: ATGAGCTTGACAGAGACACCTCCACGAAGAGACAGGGGCCGCCCATCCCTCTATGTGCAAAGGGACATGGTGCAAGAGACACAGCGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | TCAGCGATCTGCCGGAGGATTCTGAGACATGCCTTGGAGACTCCGTaGCCTTCTGGAAGACTGTGGCTTTGGTGTCTTCGGTGGAGACAC | + |
Preference number: 5 (lower is better) Translates to: SAICRRILRHALETP*PSGRLWLWCLRWRH Trigger: GTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCAGAAGGCCACGGAGTCTCCAAGGCATGTCTCAGAATCCTCCGGCAGATCGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGGATGACTGTGGACTGAGGTaGTCTGGCAATCCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: LLSAVTDPSSGLCGGLRDDCGLR*SGNPEV Trigger: GACCTCAGGATTGCCAGACAACCTCAGTCCACAGTC...ATCCCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTGGCCCAGTGGAAGCCTaGGGGGCTTGGTTGATGCCT | + |
Preference number: 5 (lower is better) Translates to: PRENQINCRPQTSAWAVCGPVEA*GAWLMP Trigger: AGGCATCAACCAAGCCCCCAAGGCTTCCACTGGGCC...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | AGCCTTCTTTCTGCAGTGACAGATCCAAGCTCTGGGCTGTGCGGAGGGCTGAGGTGGAAGACTGTGGCTTaGGTGTCTTCGGTGGAGACA | + |
Preference number: 5 (lower is better) Translates to: SLLSAVTDPSSGLCGGLRWKTVA*VSSVET Trigger: TGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCA...CCTCAGCCCTCCGCACAGCCCAGAGCTTGGATCTGTCACTGCAGAAAGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTGTGCCGCTTTACCCTaGTGGCTCCCAGGACCTCTG | + |
Preference number: 5 (lower is better) Translates to: HTFGVGKSGMAGPQTEPSCAALP*WLPGPL Trigger: CAGAGGTCCTGGGAGCCACAAGGGTAAAGCGGCACA...AGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | GTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACTGTGCCGCTTTACCCTaGTGGCTCCCAGGACCTCTG | + |
Preference number: 5 (lower is better) Translates to: VGKSGMAGPQTEPSFCSDCAALP*WLPGPL Trigger: CAGAGGTCCTGGGAGCCACAAGGGTAAAGCGGCACA...GTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 90 bp | CACTCTTGCTTTGAGCTCAGCGATCTGCCGGAGGATTCTGAGACATaGCTTGGAGACTCCGTGGCCTTCTGGAAGACTGTGGCTTTGGTG | + |
Preference number: 5 (lower is better) Translates to: HSCFELSDLPEDSET*LGDSVAFWKTVALV Trigger: CACCAAAGCCACAGTCTTCCAGAAGGCCACGGAGTCTCCAAGGCATGTCTCAGAATCCTCCGGCAGATCGCTGAGCTCAAAGCAAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 90 bp | CTTTTCCAGGAGGCTTGGACCACTCTTGCTTTGAGCTCAGCGATCTaGCGGAGGATTCTGAGACATGCCTTGGAGACTCCGTGGCCTTCT | + |
Preference number: 5 (lower is better) Translates to: LFQEAWTTLALSSAI*RRILRHALETPWPS Trigger: AGAAGGCCACGGAGTCTCCAAGGCATGTCTCAGAATCCTCCGGCAGATCGCTGAGCTCAAAGCAAGAGTGGTCCAAGCCTCCTGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | TTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCTCGATGGGCGTCTCTTaGGGGGTCTCAGGGGATTCT | + |
Preference number: 5 (lower is better) Translates to: FGVGKSGMAGPQTEPSFCSMGVS*GVSGDS Trigger: AGAATCCCCTGAGACCCCCAAAGAGACGCCCATCGA...GCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTGTGCCGCTTTACCCTaGTGGCTCCCAGGACCTCTG | + |
Preference number: 5 (lower is better) Translates to: PRENQINCRPQTSAWAVCCAALP*WLPGPL Trigger: CAGAGGTCCTGGGAGCCACAAGGGTAAAGCGGCACA...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 90 bp | GGTGTAGCTGGTATCTTCATCCAGTACCAAGCTGGTGACACGTGCTaGGCGGGGGTTGCTGAAGATGGGGTATCTGGTCACTCGATCCAT | + |
Preference number: 5 (lower is better) Translates to: GVAGIFIQYQAGDTC*AGVAEDGVSGHSIH Trigger: ATGGATCGAGTGACCAGATACCCCATCTTCAGCAACCCCCGCTCAGCACGTGTCACCAGCTTGGTACTGGATGAAGATACCAGCTACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS TCA 90 bp | TCAATTTGCTCCGTGTCCACCAAGATCTCCTCTGTGACTGTGGACTaGGGTTGTCTGGCAATCCTGAGGTCCCCATGGTCTGATGCAGCC | + |
Preference number: 5 (lower is better) Translates to: SICSVSTKISSVTVD*GCLAILRSPWSDAA Trigger: GGCTGCATCAGACCATGGGGACCTCAGGATTGCCAGACAACCTCAGTCCACAGTCACAGAGGAGATCTTGGTGGACACGGAGCAAATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS GCA 90 bp | ACCACACCCACGTTGGTAGCTTTTCCAGGAGGCTTGGACCACTCTTaGTTTGAGCTCAGCGATCTGCCGGAGGATTCTGAGACATGCCTT | + |
Preference number: 5 (lower is better) Translates to: TTPTLVAFPGGLDHS*FELSDLPEDSETCL Trigger: AAGGCATGTCTCAGAATCCTCCGGCAGATCGCTGAGCTCAAAGCAAGAGTGGTCCAAGCCTCCTGGAAAAGCTACCAACGTGGGTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CAACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGACTGTGGACTGAGGTaGTCTGGCAATCCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: QQAYVWGWQEWNGRSPNRDCGLR*SGNPEV Trigger: GACCTCAGGATTGCCAGACAACCTCAGTCCACAGTC...TCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTCGATGGGCGTCTCTTaGGGGGTCTCAGGGGATTCT | + |
Preference number: 5 (lower is better) Translates to: PRENQINCRPQTSAWAVCSMGVS*GVSGDS Trigger: AGAATCCCCTGAGACCCCCAAAGAGACGCCCATCGA...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | GCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTGGAAGACTGTGGCTTaGGTGTCTTCGGTGGAGACA | + |
Preference number: 5 (lower is better) Translates to: AYVWGWQEWNGRSPNRAFWKTVA*VSSVET Trigger: TGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCA...GAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 90 bp | AAACATGGAAAGACTTCTCCAGGGTCACTTCCTTCATTGGTGACGTaGCGGCAGTGGTATAGCCATTGGCTAGGTGGGGCCCAGTGGAAG | + |
Preference number: 5 (lower is better) Translates to: KHGKTSPGSLPSLVT*RQWYSHWLGGAQWK Trigger: CTTCCACTGGGCCCCACCTAGCCAATGGCTATACCACTGCCGTCACGTCACCAATGAAGGAAGTGACCCTGGAGAAGTCTTTCCATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS GCA 90 bp | GATCTCTCTCTCGATGGGCGTCTCTTTGGGGGTCTCAGGGGATTCTaGCTGGGTCTGACTGCCAGGATCATTGACTATATGGATGGATCT | + |
Preference number: 5 (lower is better) Translates to: DLSLDGRLFGGLRGF*LGLTARIIDYMDGS Trigger: AGATCCATCCATATAGTCAATGATCCTGGCAGTCAGACCCAGGCAGAATCCCCTGAGACCCCCAAAGAGACGCCCATCGAGAGAGAGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | AGACATGCCTTGGAGACTCCGTGGCCTTCTGGAAGACTGTGGCTTTaGTGTCTTCGGTGGAGACACCACTTGGCTTGCTGTATACTCCAA | + |
Preference number: 5 (lower is better) Translates to: RHALETPWPSGRLWL*CLRWRHHLACCILQ Trigger: TTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCAGAAGGCCACGGAGTCTCCAAGGCATGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | AACAGGCATACGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGTGGAAGACTGTGGCTTaGGTGTCTTCGGTGGAGACA | + |
Preference number: 5 (lower is better) Translates to: NRHTFGVGKSGMAGPQTEWKTVA*VSSVET Trigger: TGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCA...CTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACGTATGCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | GTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCAGTGACAGATCCAAGCGCTTTTCCAGGAGGCTaGGACCACTCTTGCTTTGAG | + |
Preference number: 5 (lower is better) Translates to: VEWQVPKQSLLSAVTDPSAFPGG*DHSCFE Trigger: CTCAAAGCAAGAGTGGTCCAAGCCTCCTGGAAAAGC...GCTTGGATCTGTCACTGCAGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CGTTTGGGGTTGGCAAGAGTGGAATGGCAGGTCCCCAAACAGAGCCTTCTTTCTGCTTTTCCAGGAGGCTaGGACCACTCTTGCTTTGAG | + |
Preference number: 5 (lower is better) Translates to: RLGLARVEWQVPKQSLLSAFPGG*DHSCFE Trigger: CTCAAAGCAAGAGTGGTCCAAGCCTCCTGGAAAAGC...AGAAAGAAGGCTCTGTTTGGGGACCTGCCATTCCACTCTTGCCAACCCCAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CACCCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATCCGCCAAGAGATTCTaGTGCCGCTTTACCCTTGTG | + |
Preference number: 5 (lower is better) Translates to: HPRENQINCRPQTSAWAVSAKRF*CRFTLV Trigger: CACAAGGGTAAAGCGGCACAAGAATCTCTTGGCGGA...TACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | AAGGAAGACGCGTCTGTTGGAAGACACGTTTGTTCTCTTTACATCTaGTCTGGTCTGGTACTCAGTGGACCAGGCCTGCAGATCACCCTG | + |
Preference number: 5 (lower is better) Translates to: KEDASVGRHVCSLYI*SGLVLSGPGLQITL Trigger: CAGGGTGATCTGCAGGCCTGGTCCACTGAGTACCAGACCAGACCAGATGTAAAGAGAACAAACGTGTCTTCCAACAGACGCGTCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CCA 90 bp | AGTACAGTGACCTCGGGGACTGCTGGCCAAGGAAGACGCGTCTGTTaGAAGACACGTTTGTTCTCTTTACATCTGGTCTGGTCTGGTACT | + |
Preference number: 5 (lower is better) Translates to: STVTSGTAGQGRRVC*KTRLFSLHLVWSGT Trigger: AGTACCAGACCAGACCAGATGTAAAGAGAACAAACGTGTCTTCCAACAGACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGTCACTGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CCA 90 bp | GAGACTCCGTGGCCTTCTGGAAGACTGTGGCTTTGGTGTCTTCGGTaGAGACACCACTTGGCTTGCTGTATACTCCAAAGGCTGAGAATT | + |
Preference number: 5 (lower is better) Translates to: ETPWPSGRLWLWCLR*RHHLACCILQRLRI Trigger: AATTCTCAGCCTTTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCAGAAGGCCACGGAGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CCTCTGCTCCAGGCAGGCAGTTCAGGACAGGTTTATTTCATAGCAACAGGCATAGACTGTGGACTGAGGTaGTCTGGCAATCCTGAGGTC | + |
Preference number: 5 (lower is better) Translates to: PLLQAGSSGQVYFIATGIDCGLR*SGNPEV Trigger: GACCTCAGGATTGCCAGACAACCTCAGTCCACAGTC...TATGCCTGTTGCTATGAAATAAACCTGTCCTGAACTGCCTGCCTGGAGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | AGGCCACAAACATCAGCCTGGGCTGTATGTTTAAATAGGGACAGCAGAGACTGGCGCAGGGGACCGGGTTaGTGTTTGCCTTTTCTAAGC | + |
Preference number: 5 (lower is better) Translates to: RPQTSAWAVCLNRDSRDWRRGPG*CLPFLS Trigger: GCTTAGAAAAGGCAAACACAAACCCGGTCCCCTGCG...CCAGTCTCTGCTGTCCCTATTTAAACATACAGCCCAGGCTGATGTTTGTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTCGCAGGGGACCGGGTTaGTGTTTGCCTTTTCTAAGC | + |
Preference number: 5 (lower is better) Translates to: PGKTKSTAGHKHQPGLYVRRGPG*CLPFLS Trigger: GCTTAGAAAAGGCAAACACAAACCCGGTCCCCTGCG...AACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS-3UTR CAA 90 bp | CCCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTCCGCCAAGAGATTCTaGTGCCGCTTTACCCTTGTG | + |
Preference number: 5 (lower is better) Translates to: PRENQINCRPQTSAWAVCSAKRF*CRFTLV Trigger: CACAAGGGTAAAGCGGCACAAGAATCTCTTGGCGGA...ACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 90 bp | TTTATCTCCTCATCCTCATCTTCCAAGTACAGTGACCTCGGGGACTaGTGGCCAAGGAAGACGCGTCTGTTGGAAGACACGTTTGTTCTC | + |
Preference number: 5 (lower is better) Translates to: FISSSSSSKYSDLGD*WPRKTRLLEDTFVL Trigger: GAGAACAAACGTGTCTTCCAACAGACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGTCACTGTACTTGGAAGATGAGGATGAGGAGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS-3UTR CAA 90 bp | CCAGGGAAAACCAAATCAACTGCAGGCCACAAACATCAGCCTGGGCTGTATGTTGCTTTTCCAGGAGGCTaGGACCACTCTTGCTTTGAG | + |
Preference number: 5 (lower is better) Translates to: PGKTKSTAGHKHQPGLYVAFPGG*DHSCFE Trigger: CTCAAAGCAAGAGTGGTCCAAGCCTCCTGGAAAAGC...AACATACAGCCCAGGCTGATGTTTGTGGCCTGCAGTTGATTTGGTTTTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 90 bp | CTGCCAGGATCATTGACTATATGGATGGATCTAGCTGGGGAAACATaGAAAGACTTCTCCAGGGTCACTTCCTTCATTGGTGACGTGACG | + |
Preference number: 5 (lower is better) Translates to: LPGSLTIWMDLAGET*KDFSRVTSFIGDVT Trigger: CGTCACGTCACCAATGAAGGAAGTGACCCTGGAGAAGTCTTTCCATGTTTCCCCAGCTAGATCCATCCATATAGTCAATGATCCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS CCA 90 bp | CTGGGTCTGACTGCCAGGATCATTGACTATATGGATGGATCTAGCTaGGGAAACATGGAAAGACTTCTCCAGGGTCACTTCCTTCATTGG | + |
Preference number: 5 (lower is better) Translates to: LGLTARIIDYMDGSS*GNMERLLQGHFLHW Trigger: CCAATGAAGGAAGTGACCCTGGAGAAGTCTTTCCATGTTTCCCCAGCTAGATCCATCCATATAGTCAATGATCCTGGCAGTCAGACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS GCA 72 bp | CTGCCCAGCGCTCAGCCTCCAGCTCCCTCCGCTGCCTaGAGAGGGTGTCACTGCTGTCGTCCAGGTGATAAG | + |
Preference number: 6 (lower is better) Translates to: LPSAQPPAPSAA*RGCHCCRPGDK Trigger: CTTATCACCTGGACGACAGCAGTGACACCCTCTGCAGGCAGCGGAGGGAGCTGGAGGCTGAGCGCTGGGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS GCA 72 bp | AGGCTGAGGGTCCTGGGAAGGCCAGTCAGGTGTGGATaGCCTGCCCACCTGCAGCCCCTCTCGTCGATGATC | + |
Preference number: 6 (lower is better) Translates to: RLRVLGRPVRCG*PAHLQPLSSMI Trigger: GATCATCGACGAGAGGGGCTGCAGGTGGGCAGGGCATCCACACCTGACTGGCCTTCCCAGGACCCTCAGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | GTCTGGTACTCAGTGGACCAGGCCTGCAGATCACCCTaGCTCCAACCAGCCTCAGGCCCCACGCCCACTAGC | + |
Preference number: 6 (lower is better) Translates to: VWYSVDQACRSP*LQPASGPTPTS Trigger: GCTAGTGGGCGTGGGGCCTGAGGCTGGTTGGAGCCAGGGTGATCTGCAGGCCTGGTCCACTGAGTACCAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CCA 72 bp | GTGGCCACTGTGCCACCTTTCCTGACTGCCTGGCTCTaGATGACTGCCCAGCGCTCAGCCTCCAGCTCCCTC | + |
Preference number: 6 (lower is better) Translates to: VATVPPFLTAWL*MTAQRSASSSL Trigger: GAGGGAGCTGGAGGCTGAGCGCTGGGCAGTCATCCAGAGCCAGGCAGTCAGGAAAGGTGGCACAGTGGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS CCA 72 bp | CCCAGTGGAAGCCTTGGGGGCTTGGTTGATGCCTGGTaGGGTTCGTGGGAAGGTCTCCCTGGCTGTGAGGCC | + |
Preference number: 6 (lower is better) Translates to: PSGSLGGLVDAW*GSWEGLPGCEA Trigger: GGCCTCACAGCCAGGGAGACCTTCCCACGAACCCCACCAGGCATCAACCAAGCCCCCAAGGCTTCCACTGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS CCA 72 bp | GGGCCCAGTGGAAGCCTTGGGGGCTTGGTTGATGCCTaGTGGGGTTCGTGGGAAGGTCTCCCTGGCTGTGAG | + |
Preference number: 6 (lower is better) Translates to: GPSGSLGGLVDA*WGSWEGLPGCE Trigger: CTCACAGCCAGGGAGACCTTCCCACGAACCCCACCAGGCATCAACCAAGCCCCCAAGGCTTCCACTGGGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS GCA 72 bp | AGCCTGGAGTGTGGCCACTGTGCCACCTTTCCTGACTaGCTGGCTCTGGATGACTGCCCAGCGCTCAGCCTC | + |
Preference number: 6 (lower is better) Translates to: SLECGHCATFPD*LALDDCPALSL Trigger: GAGGCTGAGCGCTGGGCAGTCATCCAGAGCCAGGCAGTCAGGAAAGGTGGCACAGTGGCCACACTCCAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS CCA 72 bp | AGCCCTCTCTGCTCCCTCAGCTCTGCCTCTCGCTCCTaGGCCAGCCTGATCTCTCTCTCGATGGGCGTCTCT | + |
Preference number: 6 (lower is better) Translates to: SPLCSLSSASRS*ASLISLSMGVS Trigger: AGAGACGCCCATCGAGAGAGAGATCAGGCTGGCCCAGGAGCGAGAGGCAGAGCTGAGGGAGCAGAGAGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | CCTTGCCTCTGGAGCCGGGTCTGTGGCTCGGGCATCTaGGCTGAGGATGCAATCGGAGCTCAGGCTTCTCTG | + |
Preference number: 6 (lower is better) Translates to: PCLWSRVCGSGI*AEDAIGAQASL Trigger: CAGAGAAGCCTGAGCTCCGATTGCATCCTCAGCCCAGATGCCCGAGCCACAGACCCGGCTCCAGAGGCAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | GGCATCCAGTGGGATCCGGTTGACTTTCCTTGCCTCTaGAGCCGGGTCTGTGGCTCGGGCATCTGGGCTGAG | + |
Preference number: 6 (lower is better) Translates to: GIQWDPVDFPCL*SRVCGSGIWAE Trigger: CTCAGCCCAGATGCCCGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTCAACCGGATCCCACTGGATGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 90 bp | GCTCATCTTGCTGAGCAGTGGCCTGCTGGGGATCTGTACCAGCTCTaGATGCCCGGCAGCTCGCCCAAGCCCTCTCTGCTCCCTCAGCTC | + |
Preference number: 6 (lower is better) Translates to: AHLAEQWPAGDLYQL*MPGSSPKPSLLPQL Trigger: GAGCTGAGGGAGCAGAGAGGGCTTGGGCGAGCTGCCGGGCATCAAGAGCTGGTACAGATCCCCAGCAGGCCACTGCTCAGCAAGATGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 72 bp | TGCCTGGTGGGGTTCGTGGGAAGGTCTCCCTGGCTGTaGGGCCGCAGGGGACCGGGTTTGTGTTTGCCTTTT | + |
Preference number: 6 (lower is better) Translates to: CLVGFVGRSPWL*GRRGPGLCLPF Trigger: AAAAGGCAAACACAAACCCGGTCCCCTGCGGCCTCACAGCCAGGGAGACCTTCCCACGAACCCCACCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS TCA 72 bp | ATGCAATCGGAGCTCAGGCTTCTCTGGAGCCCAGGCTaGGGGTCCTGGGAAGGCCAGTCAGGTGTGGATGCC | + |
Preference number: 6 (lower is better) Translates to: MQSELRLLWSPG*GSWEGQSGVDA Trigger: GGCATCCACACCTGACTGGCCTTCCCAGGACCCTCAGCCTGGGCTCCAGAGAAGCCTGAGCTCCGATTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 72 bp | GAGGGTCCTGGGAAGGCCAGTCAGGTGTGGATGCCCTaGCCACCTGCAGCCCCTCTCGTCGATGATCTTCTT | + |
Preference number: 6 (lower is better) Translates to: EGPGKASQVWMP*PPAAPLVDDLL Trigger: AAGAAGATCATCGACGAGAGGGGCTGCAGGTGGGCAGGGCATCCACACCTGACTGGCCTTCCCAGGACCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 72 bp | CTGGTAGGCATCCAGTGGGATCCGGTTGACTTTCCTTaGCTCTGGAGCCGGGTCTGTGGCTCGGGCATCTGG | + |
Preference number: 6 (lower is better) Translates to: LVGIQWDPVDFP*LWSRVCGSGIW Trigger: CCAGATGCCCGAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTCAACCGGATCCCACTGGATGCCTACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 72 bp | AGTGATGCCAGATGCCCGGGAGGAACTCCGGGAGTCTaGCTCATGGCTCTCATCCTCGGCTGGCACTGGGGA | + |
Preference number: 6 (lower is better) Translates to: SDARCPGGTPGV*LMALILGWHWG Trigger: TCCCCAGTGCCAGCCGAGGATGAGAGCCATGAGCAAGACTCCCGGAGTTCCTCCCGGGCATCTGGCATCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 90 bp | CACCTGCAGCCCCTCTCGTCGATGATCTTCTTCCCGCTGTGTCTCTaGCACCATGTCCCTTTGCACATAGAGGGATGGGCGGCCCCTGTC | + |
Preference number: 6 (lower is better) Translates to: HLQPLSSMIFFPLCL*HHVPLHIEGWAAPV Trigger: GACAGGGGCCGCCCATCCCTCTATGTGCAAAGGGACATGGTGCAAGAGACACAGCGGGAAGAAGATCATCGACGAGAGGGGCTGCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | GCTCTCATCCTCGGCTGGCACTGGGGAGAACACCTCTaGGAAGAAAGCATTCCTCCGCTCTTCAGCCACCTC | + |
Preference number: 6 (lower is better) Translates to: ALILGWHWGEHL*EESIPPLFSHL Trigger: GAGGTGGCTGAAGAGCGGAGGAATGCTTTCTTCCCAGAGGTGTTCTCCCCAGTGCCAGCCGAGGATGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | ACCTGCATACCACATCTCCTTCCTAGTCTTCTGCCCTaGGGGAGCACTGTCCTCAGGGGCCTCCACCTTCCA | + |
Preference number: 6 (lower is better) Translates to: TCIPHLLPSLLP*GSTVLRGLHLP Trigger: TGGAAGGTGGAGGCCCCTGAGGACAGTGCTCCCCCAGGGCAGAAGACTAGGAAGGAGATGTGGTATGCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 72 bp | CTAGATATGGCTGGTAGGCATCCAGTGGGATCCGGTTaGCTTTCCTTGCCTCTGGAGCCGGGTCTGTGGCTC | + |
Preference number: 6 (lower is better) Translates to: LDMAGRHPVGSG*LSLPLEPGLWL Trigger: GAGCCACAGACCCGGCTCCAGAGGCAAGGAAAGTCAACCGGATCCCACTGGATGCCTACCAGCCATATCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 72 bp | TTGATACCTGCATACCACATCTCCTTCCTAGTCTTCTaGCCTGGGGGAGCACTGTCCTCAGGGGCCTCCACC | + |
Preference number: 6 (lower is better) Translates to: LIPAYHISFLVF*PGGALSSGAST Trigger: GGTGGAGGCCCCTGAGGACAGTGCTCCCCCAGGGCAGAAGACTAGGAAGGAGATGTGGTATGCAGGTATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | GGAGTCTTGCTCATGGCTCTCATCCTCGGCTGGCACTaGGGAGAACACCTCTGGGAAGAAAGCATTCCTCCG | + |
Preference number: 6 (lower is better) Translates to: GVLLMALILGWH*GEHLWEESIPP Trigger: CGGAGGAATGCTTTCTTCCCAGAGGTGTTCTCCCCAGTGCCAGCCGAGGATGAGAGCCATGAGCAAGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 90 bp | TCGTCGATGATCTTCTTCCCGCTGTGTCTCTTGCACCATGTCCCTTaGCACATAGAGGGATGGGCGGCCCCTGTCTCTTCGTGGAGGTGT | + |
Preference number: 6 (lower is better) Translates to: SSMIFFPLCLLHHVP*HIEGWAAPVSSWRC Trigger: ACACCTCCACGAAGAGACAGGGGCCGCCCATCCCTCTATGTGCAAAGGGACATGGTGCAAGAGACACAGCGGGAAGAAGATCATCGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 72 bp | CCTTCCACACCAGCCCCGAATTCAGGTGGACGGGGGTaGAGAGTGGTGATTCTGACACTGAATAGCTGCCAG | + |
Preference number: 6 (lower is better) Translates to: PSTPAPNSGGRG*RVVILTLNSCQ Trigger: CTGGCAGCTATTCAGTGTCAGAATCACCACTCTTCACCCCCGTCCACCTGAATTCGGGGCTGGTGTGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | TGGAGGTGTCTCTGTCAAGCTCATCTTGCTGAGCAGTaGCCTGCTGGGGATCTGTACCAGCTCTTGATGCCC | + |
Preference number: 6 (lower is better) Translates to: WRCLCQAHLAEQ*PAGDLYQLLMP Trigger: GGGCATCAAGAGCTGGTACAGATCCCCAGCAGGCCACTGCTCAGCAAGATGAGCTTGACAGAGACACCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | TGTCTCTTGCACCATGTCCCTTTGCACATAGAGGGATaGGCGGCCCCTGTCTCTTCGTGGAGGTGTCTCTGT | + |
Preference number: 6 (lower is better) Translates to: CLLHHVPLHIEG*AAPVSSWRCLC Trigger: ACAGAGACACCTCCACGAAGAGACAGGGGCCGCCCATCCCTCTATGTGCAAAGGGACATGGTGCAAGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | GCAGGTCAGATGACTGTGACTTTTGTAGCCTCAATATaGGGCCTCCAGCCACTTCCCAGCCCCAGGTATGGG | + |
Preference number: 6 (lower is better) Translates to: AGQMTVTFVASI*GLQPLPSPRYG Trigger: CCCATACCTGGGGCTGGGAAGTGGCTGGAGGCCCCATATTGAGGCTACAAAAGTCACAGTCATCTGACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 72 bp | ATCTTCTTCCCGCTGTGTCTCTTGCACCATGTCCCTTaGCACATAGAGGGATGGGCGGCCCCTGTCTCTTCG | + |
Preference number: 6 (lower is better) Translates to: IFFPLCLLHHVP*HIEGWAAPVSS Trigger: CGAAGAGACAGGGGCCGCCCATCCCTCTATGTGCAAAGGGACATGGTGCAAGAGACACAGCGGGAAGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 72 bp | CCCCTCTCGTCGATGATCTTCTTCCCGCTGTGTCTCTaGCACCATGTCCCTTTGCACATAGAGGGATGGGCG | + |
Preference number: 6 (lower is better) Translates to: PLSSMIFFPLCL*HHVPLHIEGWA Trigger: CGCCCATCCCTCTATGTGCAAAGGGACATGGTGCAAGAGACACAGCGGGAAGAAGATCATCGACGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 72 bp | AGCTCAGCGATCTGCCGGAGGATTCTGAGACATGCCTaGGAGACTCCGTGGCCTTCTGGAAGACTGTGGCTT | + |
Preference number: 6 (lower is better) Translates to: SSAICRRILRHA*ETPWPSGRLWL Trigger: AAGCCACAGTCTTCCAGAAGGCCACGGAGTCTCCAAGGCATGTCTCAGAATCCTCCGGCAGATCGCTGAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 72 bp | CTCACCACACCCACGTTGGTAGCTTTTCCAGGAGGCTaGGACCACTCTTGCTTTGAGCTCAGCGATCTGCCG | + |
Preference number: 6 (lower is better) Translates to: LTTPTLVAFPGG*DHSCFELSDLP Trigger: CGGCAGATCGCTGAGCTCAAAGCAAGAGTGGTCCAAGCCTCCTGGAAAAGCTACCAACGTGGGTGTGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 90 bp | ACCCTTGTGGCTCCCAGGACCTCTGAGTTGACACTGTCTGAGGGGTaGATACCTGCATACCACATCTCCTTCCTAGTCTTCTGCCCTGGG | + |
Preference number: 6 (lower is better) Translates to: TLVAPRTSELTLSEG*IPAYHISFLVFCPG Trigger: CCCAGGGCAGAAGACTAGGAAGGAGATGTGGTATGCAGGTATCAACCCCTCAGACAGTGTCAACTCAGAGGTCCTGGGAGCCACAAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 72 bp | GGTATCTTCATCCAGTACCAAGCTGGTGACACGTGCTaGGCGGGGGTTGCTGAAGATGGGGTATCTGGTCAC | + |
Preference number: 6 (lower is better) Translates to: GIFIQYQAGDTC*AGVAEDGVSGH Trigger: GTGACCAGATACCCCATCTTCAGCAACCCCCGCTCAGCACGTGTCACCAGCTTGGTACTGGATGAAGATACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS TCA 72 bp | TCCGTGTCCACCAAGATCTCCTCTGTGACTGTGGACTaGGGTTGTCTGGCAATCCTGAGGTCCCCATGGTCT | + |
Preference number: 6 (lower is better) Translates to: SVSTKISSVTVD*GCLAILRSPWS Trigger: AGACCATGGGGACCTCAGGATTGCCAGACAACCTCAGTCCACAGTCACAGAGGAGATCTTGGTGGACACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS TCA 72 bp | AAGACTTCTCCAGGGTCACTTCCTTCATTGGTGACGTaGCGGCAGTGGTATAGCCATTGGCTAGGTGGGGCC | + |
Preference number: 6 (lower is better) Translates to: KTSPGSLPSLVT*RQWYSHWLGGA Trigger: GGCCCCACCTAGCCAATGGCTATACCACTGCCGTCACGTCACCAATGAAGGAAGTGACCCTGGAGAAGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS TCA 72 bp | CTCTTCGTGGAGGTGTCTCTGTCAAGCTCATCTTGCTaGGCAGTGGCCTGCTGGGGATCTGTACCAGCTCTT | + |
Preference number: 6 (lower is better) Translates to: LFVEVSLSSSSC*AVACWGSVPAL Trigger: AAGAGCTGGTACAGATCCCCAGCAGGCCACTGCTCAGCAAGATGAGCTTGACAGAGACACCTCCACGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 72 bp | TCATCCTCATCTTCCAAGTACAGTGACCTCGGGGACTaGTGGCCAAGGAAGACGCGTCTGTTGGAAGACACG | + |
Preference number: 6 (lower is better) Translates to: SSSSSKYSDLGD*WPRKTRLLEDT Trigger: CGTGTCTTCCAACAGACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGTCACTGTACTTGGAAGATGAGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS GCA 72 bp | CTCGATGGGCGTCTCTTTGGGGGTCTCAGGGGATTCTaGCTGGGTCTGACTGCCAGGATCATTGACTATATG | + |
Preference number: 6 (lower is better) Translates to: LDGRLFGGLRGF*LGLTARIIDYM Trigger: CATATAGTCAATGATCCTGGCAGTCAGACCCAGGCAGAATCCCCTGAGACCCCCAAAGAGACGCCCATCGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | TTGGAGACTCCGTGGCCTTCTGGAAGACTGTGGCTTTaGTGTCTTCGGTGGAGACACCACTTGGCTTGCTGT | + |
Preference number: 6 (lower is better) Translates to: LETPWPSGRLWL*CLRWRHHLACC Trigger: ACAGCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCAGAAGGCCACGGAGTCTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 72 bp | TGCCGCTTTACCCTTGTGGCTCCCAGGACCTCTGAGTaGACACTGTCTGAGGGGTTGATACCTGCATACCAC | + |
Preference number: 6 (lower is better) Translates to: CRFTLVAPRTSE*TLSEGLIPAYH Trigger: GTGGTATGCAGGTATCAACCCCTCAGACAGTGTCAACTCAGAGGTCCTGGGAGCCACAAGGGTAAAGCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 90 bp | CTTGCTTTGAGCTCAGCGATCTGCCGGAGGATTCTGAGACATGCCTaGGAGACTCCGTGGCCTTCTGGAAGACTGTGGCTTTGGTGTCTT | + |
Preference number: 6 (lower is better) Translates to: LALSSAICRRILRHA*ETPWPSGRLWLWCL Trigger: AAGACACCAAAGCCACAGTCTTCCAGAAGGCCACGGAGTCTCCAAGGCATGTCTCAGAATCCTCCGGCAGATCGCTGAGCTCAAAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 90 bp | CGCAGTGGACGCAGGTGGAAATTCCCTAATCTCACCACACCCACGTaGGTAGCTTTTCCAGGAGGCTTGGACCACTCTTGCTTTGAGCTC | + |
Preference number: 6 (lower is better) Translates to: RSGRRWKFPNLTTPT*VAFPGGLDHSCFEL Trigger: GAGCTCAAAGCAAGAGTGGTCCAAGCCTCCTGGAAAAGCTACCAACGTGGGTGTGGTGAGATTAGGGAATTTCCACCTGCGTCCACTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS GCA 72 bp | ACGTTGGTAGCTTTTCCAGGAGGCTTGGACCACTCTTaGTTTGAGCTCAGCGATCTGCCGGAGGATTCTGAG | + |
Preference number: 6 (lower is better) Translates to: TLVAFPGGLDHS*FELSDLPEDSE Trigger: CTCAGAATCCTCCGGCAGATCGCTGAGCTCAAAGCAAGAGTGGTCCAAGCCTCCTGGAAAAGCTACCAACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | TTGTTCTCTTTACATCTGGTCTGGTCTGGTACTCAGTaGACCAGGCCTGCAGATCACCCTGGCTCCAACCAG | + |
Preference number: 6 (lower is better) Translates to: LFSLHLVWSGTQ*TRPADHPGSNQ Trigger: CTGGTTGGAGCCAGGGTGATCTGCAGGCCTGGTCCACTGAGTACCAGACCAGACCAGATGTAAAGAGAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CCA 72 bp | ACCTCGGGGACTGCTGGCCAAGGAAGACGCGTCTGTTaGAAGACACGTTTGTTCTCTTTACATCTGGTCTGG | + |
Preference number: 6 (lower is better) Translates to: TSGTAGQGRRVC*KTRLFSLHLVW Trigger: CCAGACCAGATGTAAAGAGAACAAACGTGTCTTCCAACAGACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CAA 72 bp | GACCTCGGGGACTGCTGGCCAAGGAAGACGCGTCTGTaGGAAGACACGTTTGTTCTCTTTACATCTGGTCTG | + |
Preference number: 6 (lower is better) Translates to: DLGDCWPRKTRL*EDTFVLFTSGL Trigger: CAGACCAGATGTAAAGAGAACAAACGTGTCTTCCAACAGACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CAA 72 bp | CGCAGGTGGAAATTCCCTAATCTCACCACACCCACGTaGGTAGCTTTTCCAGGAGGCTTGGACCACTCTTGC | + |
Preference number: 6 (lower is better) Translates to: RRWKFPNLTTPT*VAFPGGLDHSC Trigger: GCAAGAGTGGTCCAAGCCTCCTGGAAAAGCTACCAACGTGGGTGTGGTGAGATTAGGGAATTTCCACCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | GAAGACACGTTTGTTCTCTTTACATCTGGTCTGGTCTaGTACTCAGTGGACCAGGCCTGCAGATCACCCTGG | + |
Preference number: 6 (lower is better) Translates to: EDTFVLFTSGLV*YSVDQACRSPW Trigger: CCAGGGTGATCTGCAGGCCTGGTCCACTGAGTACCAGACCAGACCAGATGTAAAGAGAACAAACGTGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CCA 72 bp | GCGTCTGTTGGAAGACACGTTTGTTCTCTTTACATCTaGTCTGGTCTGGTACTCAGTGGACCAGGCCTGCAG | + |
Preference number: 6 (lower is better) Translates to: ASVGRHVCSLYI*SGLVLSGPGLQ Trigger: CTGCAGGCCTGGTCCACTGAGTACCAGACCAGACCAGATGTAAAGAGAACAAACGTGTCTTCCAACAGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CCA 72 bp | TGGCCTTCTGGAAGACTGTGGCTTTGGTGTCTTCGGTaGAGACACCACTTGGCTTGCTGTATACTCCAAAGG | + |
Preference number: 6 (lower is better) Translates to: WPSGRLWLWCLR*RHHLACCILQR Trigger: CCTTTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCAGAAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CAA 90 bp | AAGTACAGTGACCTCGGGGACTGCTGGCCAAGGAAGACGCGTCTGTaGGAAGACACGTTTGTTCTCTTTACATCTGGTCTGGTCTGGTAC | + |
Preference number: 6 (lower is better) Translates to: KYSDLGDCWPRKTRL*EDTFVLFTSGLVWY Trigger: GTACCAGACCAGACCAGATGTAAAGAGAACAAACGTGTCTTCCAACAGACGCGTCTTCCTTGGCCAGCAGTCCCCGAGGTCACTGTACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CAA 90 bp | AGATTCTTGTGCCGCTTTACCCTTGTGGCTCCCAGGACCTCTGAGTaGACACTGTCTGAGGGGTTGATACCTGCATACCACATCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: RFLCRFTLVAPRTSE*TLSEGLIPAYHISF Trigger: GAAGGAGATGTGGTATGCAGGTATCAACCCCTCAGACAGTGTCAACTCAGAGGTCCTGGGAGCCACAAGGGTAAAGCGGCACAAGAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS TCA 72 bp | GTCTCTTTGGGGGTCTCAGGGGATTCTGCCTGGGTCTaGCTGCCAGGATCATTGACTATATGGATGGATCTA | + |
Preference number: 6 (lower is better) Translates to: VSLGVSGDSAWV*LPGSLTIWMDL Trigger: TAGATCCATCCATATAGTCAATGATCCTGGCAGTCAGACCCAGGCAGAATCCCCTGAGACCCCCAAAGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS GCA 72 bp | CTCAGGAATTGCTGTCGAGCAGCCAGGAAATCAATTTaGTCCGTGTCCACCAAGATCTCCTCTGTGACTGTG | + |
Preference number: 6 (lower is better) Translates to: LRNCCRAARKSI*SVSTKISSVTV Trigger: CACAGTCACAGAGGAGATCTTGGTGGACACGGAGCAAATTGATTTCCTGGCTGCTCGACAGCAATTCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS CAA 90 bp | TGGAAGACTGTGGCTTTGGTGTCTTCGGTGGAGACACCACTTGGCTaGCTGTATACTCCAAAGGCTGAGAATTCTAGTTTAGGGGTCCCA | + |
Preference number: 6 (lower is better) Translates to: WKTVALVSSVETPLG*LYTPKAENSSLGVP Trigger: TGGGACCCCTAAACTAGAATTCTCAGCCTTTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAGCCACAGTCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | TGTTGGAAGACACGTTTGTTCTCTTTACATCTGGTCTaGTCTGGTACTCAGTGGACCAGGCCTGCAGATCAC | + |
Preference number: 6 (lower is better) Translates to: CWKTRLFSLHLV*SGTQWTRPADH Trigger: GTGATCTGCAGGCCTGGTCCACTGAGTACCAGACCAGACCAGATGTAAAGAGAACAAACGTGTCTTCCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 ENSMUST00000219734.2 |
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CDS CAA 72 bp | AGACTGTGGCTTTGGTGTCTTCGGTGGAGACACCACTaGGCTTGCTGTATACTCCAAAGGCTGAGAATTCTA | + |
Preference number: 6 (lower is better) Translates to: RLWLWCLRWRHH*ACCILQRLRIL Trigger: TAGAATTCTCAGCCTTTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAGCCACAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | ACTGCCAGGATCATTGACTATATGGATGGATCTAGCTaGGGAAACATGGAAAGACTTCTCCAGGGTCACTTC | + |
Preference number: 6 (lower is better) Translates to: TARIIDYMDGSS*GNMERLLQGHF Trigger: GAAGTGACCCTGGAGAAGTCTTTCCATGTTTCCCCAGCTAGATCCATCCATATAGTCAATGATCCTGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |
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CDS CAA 72 bp | GTGGCTTTGGTGTCTTCGGTGGAGACACCACTTGGCTaGCTGTATACTCCAAAGGCTGAGAATTCTAGTTTA | + |
Preference number: 6 (lower is better) Translates to: VALVSSVETPLG*LYTPKAENSSL Trigger: TAAACTAGAATTCTCAGCCTTTGGAGTATACAGCAAGCCAAGTGGTGTCTCCACCGAAGACACCAAAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000219305.2 |
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CDS CCA 72 bp | TCATTGACTATATGGATGGATCTAGCTGGGGAAACATaGAAAGACTTCTCCAGGGTCACTTCCTTCATTGGT | + |
Preference number: 6 (lower is better) Translates to: SLTIWMDLAGET*KDFSRVTSFIG Trigger: ACCAATGAAGGAAGTGACCCTGGAGAAGTCTTTCCATGTTTCCCCAGCTAGATCCATCCATATAGTCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046833.5 ENSMUST00000169041.9 ENSMUST00000218687.2 ENSMUST00000219305.2 |