Pregenerated sensors for MIS18BP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047534Ensembl transcript IDs: ENSMUST00000052201.9, ENSMUST00000124201.2, ENSMUST00000221296.2, ENSMUST00000222244.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTTGGTATTGCCTTCAAATCCCACTCTATGTTCAAAGGTCTCTTaGGACTTACTGGTAGAACTTGGAGTTCCATGTATATCTGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SLVLPSNPTLCSKVS*DLLVELGVPCISES Trigger: TGACTCAGATATACATGGAACTCCAAGTTCTACCAGTAAGTCTCAAGAGACCTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR TCA 90 bp | GCATTTGTTTACTTTTCGGGCAAGGTATCTGAATATGTCTGGCAGTaGTTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: AFVYFSGKVSEYVWQ*LCHIHCSPPWYCLQ Trigger: TTGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAGACATATTCAGATACCTTGCCCGAAAAGTAAACAAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR TCA 90 bp | GGTCTCTTGAGACTTACTGGTAGAACTTGGAGTTCCATGTATATCTaGGTCACTTTCTTCTTGATGCTTTGCTTTGAAAAAGTCCGATAT | + |
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Preference number: 1 (lower is better) Translates to: GLLRLTGRTWSSMYI*VTFFLMLCFEKVRY Trigger: ATATCGGACTTTTTCAAAGCAAAGCATCAAGAAGAAAGTGACTCAGATATACATGGAACTCCAAGTTCTACCAGTAAGTCTCAAGAGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR TCA 90 bp | ATAAAATCATTGGTGAGCATTTGTTTACTTTTCGGGCAAGGTATCTaGATATGTCTGGCAGTGATTATGTCACATTCATTGCAGTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: IKSLVSICLLFGQGI*ICLAVIMSHSLQSS Trigger: GGAGGACTGCAATGAATGTGACATAATCACTGCCAGACATATTCAGATACCTTGCCCGAAAAGTAAACAAATGCTCACCAATGATTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR TCA 90 bp | CTGGTAGAACTTGGAGTTCCATGTATATCTGAGTCACTTTCTTCTTaGTGCTTTGCTTTGAAAAAGTCCGATATTCCTTCAATAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LVELGVPCISESLSS*CFALKKSDIPSIER Trigger: TCTCTCTATTGAAGGAATATCGGACTTTTTCAAAGCAAAGCATCAAGAAGAAAGTGACTCAGATATACATGGAACTCCAAGTTCTACCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR-3UTR CCA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTAAACAGAAGGAACCCTaGCTTGTAATTTCAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLKQKEP*LVISGC Trigger: GCAGCCTGAAATTACAAGCCAGGGTTCCTTCTGTTT...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTATTGCCTTCAAATCCCACTCTATGTTCAAAGGTCTCTTGAGACTTACTCTTGATGCTTTGCTTTaGAAAAGTCCGATATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LGIAFKSHSMFKGLLRLTLDALL*KSPIFL Trigger: AAGGAATATCGGACTTTTTCAAAGCAAAGCATCAAG...AGTAAGTCTCAAGAGACCTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTATTGCCTTCAAATCCCACTCTATGTTCAAAGGTCTCTTGAGACTTACTAGTTCCATGTATATCTaGGTCACTTTCTTCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: LGIAFKSHSMFKGLLRLTSSMYI*VTFFLM Trigger: CATCAAGAAGAAAGTGACTCAGATATACATGGAACT...AGTAAGTCTCAAGAGACCTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR-3UTR CCA 90 bp | AATGCACACATAGGCAAAGTATTTGTAAGCTGTAGTTCTGAGGAATGCTCTATAACAAACATAAGACATTaGGAAACAAATCTGCATTCC | + |
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Preference number: 2 (lower is better) Translates to: NAHIGKVFVSCSSEECSITNIRH*ETNLHS Trigger: GGAATGCAGATTTGTTTCCCAATGTCTTATGTTTGT...TATAGAGCATTCCTCAGAACTACAGCTTACAAATACTTTGCCTATGTGTGCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| 3UTR TCA 72 bp | TACTTTTCGGGCAAGGTATCTGAATATGTCTGGCAGTaGTTATGTCACATTCATTGCAGTCCTCCTTGGTAT | + |
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Preference number: 3 (lower is better) Translates to: YFSGKVSEYVWQ*LCHIHCSPPWY Trigger: ATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAGACATATTCAGATACCTTGCCCGAAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR TCA 72 bp | TTGGTGAGCATTTGTTTACTTTTCGGGCAAGGTATCTaGATATGTCTGGCAGTGATTATGTCACATTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LVSICLLFGQGI*ICLAVIMSHSL Trigger: CAATGAATGTGACATAATCACTGCCAGACATATTCAGATACCTTGCCCGAAAAGTAAACAAATGCTCACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| 3UTR TCA 72 bp | AGACTTACTGGTAGAACTTGGAGTTCCATGTATATCTaGGTCACTTTCTTCTTGATGCTTTGCTTTGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: RLTGRTWSSMYI*VTFFLMLCFEK Trigger: TTTTTCAAAGCAAAGCATCAAGAAGAAAGTGACTCAGATATACATGGAACTCCAAGTTCTACCAGTAAGTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CCA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTCGGGATCCTTGGCCTTaGGGTTCTTCTGTGTATTTC | + |
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Preference number: 4 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLRDPWP*GSSVYF Trigger: GAAATACACAGAAGAACCCCAAGGCCAAGGATCCCG...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTAATCTTTCAAAGGAGTaGGTGTGCCTGAAGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLNLSKE*VCLKGC Trigger: GCATCCCTTCAGGCACACTCACTCCTTTGAAAGATT...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCACTTGTCCGCCAAACTaGGCTCTAGTTAATGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLTCPPN*ALVNAF Trigger: GAAGGCATTAACTAGAGCCCAGTTTGGCGGACAAGT...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CCA 90 bp | CATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAATCCCACTCTATGTTCAAAGACTTGTCCGCCAAACTaGGCTCTAGTTAATGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLQSSLVLPSNPTLCSKTCPPN*ALVNAF Trigger: GAAGGCATTAACTAGAGCCCAGTTTGGCGGACAAGT...CTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR TCA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTAACAGGACTCTCTTTTaGATGAAGAACTTGTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLNRTLF*MKNLSA Trigger: GGCGGACAAGTTCTTCATTCAAAAGAGAGTCCTGTT...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CCA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTCCAATGAAGGGTCATTaGATTGGACCGACGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLPMKGH*IGPTFV Trigger: AACAAACGTCGGTCCAATCCAATGACCCTTCATTGG...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCCATTGCAGTCCTCCTTaGTATTGCCTTCAAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLHCSPP*YCLQIP Trigger: TGGGATTTGAAGGCAATACCAAGGAGGACTGCAATG...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| 3UTR CAA 72 bp | CTGGCAGTGATTATGTCACATTCATTGCAGTCCTCCTaGGTATTGCCTTCAAATCCCACTCTATGTTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LAVIMSHSLQSS*VLPSNPTLCSK Trigger: CTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCGCAGTCTAACTAGATTTAAAGGGTGGATGAATACTACTATAGCAGAGTGCCATAGCCACATCTaGCCAAAAGCCAGGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLRSLTRFKGWMNTTIAECHSHI*PKARFV Trigger: CACAAACCTGGCTTTTGGTCAGATGTGGCTATGGCA...CTCTGCTATAGTAGTATTCATCCACCCTTTAAATCTAGTTAGACTGCGCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCGCAAGGGTGTTGCAGTaGAAAAATCATCATGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLARVLQ*KNHHGC Trigger: ACAACCATGATGATTTTTTCACTGCAACACCCTTGC...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR GCA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTATCCCAACATGCTACTaGTCCTTGTCAGTTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLIPTCY*SLSVVL Trigger: AAGAACAACTGACAAGGAGCAGTAGCATGTTGGGAT...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| 3UTR CAA 72 bp | GTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATaGCCTTCAAATCCCACTCTATGTTCAAAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIMSHSLQSSLV*PSNPTLCSKVS Trigger: AGAGACCTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR TCA 90 bp | ATGAGGACCGGCAATACTGTGATACACCTATTTGATTTTCAGTTTTCTGCAGTTAACAGGACTCTCTTTTaGATGAAGAACTTGTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: MRTGNTVIHLFDFQFSAVNRTLF*MKNLSA Trigger: GGCGGACAAGTTCTTCATTCAAAAGAGAGTCCTGTT...AACTGCAGAAAACTGAAAATCAAATAGGTGTATCACAGTATTGCCGGTCCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR TCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCGGAGGATATCTTTTGTaGTGTGGTTTGTGTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLGGYLL*CGLCFL Trigger: GAGAAAACACAAACCACATCACAAAAGATATCCTCC...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR GCA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTTTATGTCACATTCATTaGAGTCCTCCTTGGTATTGC | + |
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Preference number: 4 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLLCHIH*SPPWYC Trigger: GCAATACCAAGGAGGACTGCAATGAATGTGACATAA...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CCA 90 bp | ATGAGGACCGGCAATACTGTGATACACCTATTTGATTTTCAGTTTTCTGCAGTTCCAATGAAGGGTCATTaGATTGGACCGACGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: MRTGNTVIHLFDFQFSAVPMKGH*IGPTFV Trigger: AACAAACGTCGGTCCAATCCAATGACCCTTCATTGG...AACTGCAGAAAACTGAAAATCAAATAGGTGTATCACAGTATTGCCGGTCCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CCA 90 bp | TGTCTGGCAGTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTTCATGTTCCTTCCAGTTGTaGGGAAATCCAAACATAAAT | + |
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Preference number: 4 (lower is better) Translates to: CLAVIMSHSLQSSLVLPSCSFQL*GNPNIN Trigger: ATTTATGTTTGGATTTCCCCACAACTGGAAGGAACA...TGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCAGATCGAGGTCTCTTTaGTGTGATATAACAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLRSRSL*CDITSS Trigger: AGAGCTTGTTATATCACACCAAAGAGACCTCGATCT...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCAGACAAATGAATTCCTaGATGCTTCAAAGGTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLRQMNS*MLQRCY Trigger: GTAACACCTTTGAAGCATTCAGGAATTCATTTGTCT...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | ATATGTCTGGCAGTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTAGACAAATGAATTCCTaGATGCTTCAAAGGTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: ICLAVIMSHSLQSSLVLPRQMNS*MLQRCY Trigger: GTAACACCTTTGAAGCATTCAGGAATTCATTTGTCT...AGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAGACATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR TCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCGTTCCAGAAGACAAATaGATTCCTGAATGCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLVPEDK*IPECFK Trigger: TTTGAAGCATTCAGGAATTCATTTGTCTTCTGGAAC...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCTTCTTTATGGGATCTTaGAGAATAGTTCTTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLFFMGS*RIVLLD Trigger: GTCCAGAAGAACTATTCTTCAAGATCCCATAAAGAA...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | GTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAATCCCACTTTCTTTATGGGATCTTaGAGAATAGTTCTTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: VIMSHSLQSSLVLPSNPTFFMGS*RIVLLD Trigger: GTCCAGAAGAACTATTCTTCAAGATCCCATAAAGAA...AGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR GCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCTGTAATATCCTCTTTTaGAGTCCTTTCTGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLCNILF*SPFCCH Trigger: GTGACAACAGAAAGGACTGCAAAAGAGGATATTACA...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CCA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCTGTTCCTTCCAGTTGTaGGGAAATCCAAACATAAAT | + |
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Preference number: 4 (lower is better) Translates to: SFHSSIFQSTILTLAPYLCSFQL*GNPNIN Trigger: ATTTATGTTTGGATTTCCCCACAACTGGAAGGAACA...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | CTTCACTTGACAAATGTGATGAGGACCGGCAATACTGTGATACACCTATTTGATGTTCCAGAAGACAAATaGATTCCTGAATGCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LHLTNVMRTGNTVIHLFDVPEDK*IPECFK Trigger: TTTGAAGCATTCAGGAATTCATTTGTCTTCTGGAAC...ATCAAATAGGTGTATCACAGTATTGCCGGTCCTCATCACATTTGTCAAGTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR GCA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTGGCATATTTCTTCTTTaGAATGTTCCAGAAGACAAA | + |
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Preference number: 4 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLGIFLL*NVPEDK Trigger: TTTGTCTTCTGGAACATTGCAAAGAAGAAATATGCC...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR GCA 90 bp | CTGGCAGTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAATGTCACGCTGTACTTTTaGTTTCATTCTTTGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LAVIMSHSLQSSLVLPSNVTLYF*FHSLKD Trigger: ATCTTTCAAAGAATGAAAGCAAAAGTACAGCGTGAC...ATTTGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR GCA 90 bp | ATATGTCTGGCAGTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTATGCCTTCTTTGAAATaGACGAAGCTGAAACATTTT | + |
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Preference number: 4 (lower is better) Translates to: ICLAVIMSHSLQSSLVLPMPSLK*TKLKHF Trigger: AAAATGTTTCAGCTTCGTGCATTTCAAAGAAGGCAT...AGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAGACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CCA 90 bp | TATTTGCGCAGTCTAACTAGATTTAAAGGGTGGATGAATACTACTATAGCAGAGATCCTGCTTCTTTCATaGAGACCGAGTCTATCAATC | + |
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Preference number: 4 (lower is better) Translates to: YLRSLTRFKGWMNTTIAEILLLS*RPSLSI Trigger: GATTGATAGACTCGGTCTCCATGAAAGAAGCAGGAT...CTCTGCTATAGTAGTATTCATCCACCCTTTAAATCTAGTTAGACTGCGCAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | AATGCACACATAGGCAAAGTATTTGTAAGCTGTAGTTCTGAGGAATGCTCTATATGTTCAAAGGTCTCTTaGGACTTACTGGTAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: NAHIGKVFVSCSSEECSICSKVS*DLLVEL Trigger: AAGTTCTACCAGTAAGTCTCAAGAGACCTTTGAACA...TATAGAGCATTCCTCAGAACTACAGCTTACAAATACTTTGCCTATGTGTGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | TATTTGCGCAGTCTAACTAGATTTAAAGGGTGGATGAATACTACTATAGCAGAGGAATATGTCTGGCAGTaGTTATGTCACATTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: YLRSLTRFKGWMNTTIAEEYVWQ*LCHIHC Trigger: GCAATGAATGTGACATAATCACTGCCAGACATATTC...CTCTGCTATAGTAGTATTCATCCACCCTTTAAATCTAGTTAGACTGCGCAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTGGACCGGCAATACTGTaGTACACCTATTTGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: LVISGCMMLKVFILVSSSGPAIL*YTYLIF Trigger: GAAAATCAAATAGGTGTATCACAGTATTGCCGGTCC...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR TCA 90 bp | AATGCACACATAGGCAAAGTATTTGTAAGCTGTAGTTCTGAGGAATGCTCTATACTCACCTTCAGTTTCTaGAATGAGGAGGATATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NAHIGKVFVSCSSEECSILTFSF*NEEDIF Trigger: AAAGATATCCTCCTCATTTCAGAAACTGAAGGTGAG...TATAGAGCATTCCTCAGAACTACAGCTTACAAATACTTTGCCTATGTGTGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR GCA 90 bp | CTTCACTTGACAAATGTGATGAGGACCGGCAATACTGTGATACACCTATTTGATGGCATATTTCTTCTTTaGAATGTTCCAGAAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHLTNVMRTGNTVIHLFDGIFLL*NVPEDK Trigger: TTTGTCTTCTGGAACATTGCAAAGAAGAAATATGCC...ATCAAATAGGTGTATCACAGTATTGCCGGTCCTCATCACATTTGTCAAGTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGACCGGCAATACTGTGATACACCTATTTGATTTTCAGTTTTCTGCAGTTTGTAATATCCTCTTTTaGAGTCCTTTCTGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MRTGNTVIHLFDFQFSAVCNILF*SPFCCH Trigger: GTGACAACAGAAAGGACTGCAAAAGAGGATATTACA...AACTGCAGAAAACTGAAAATCAAATAGGTGTATCACAGTATTGCCGGTCCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
||
| CDS-3UTR GCA 90 bp | TATTTGCGCAGTCTAACTAGATTTAAAGGGTGGATGAATACTACTATAGCAGAGTTTTTCTTGGACTCTTaGTGTTTCCTGTCTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLRSLTRFKGWMNTTIAEFFLDS*CFLSGL Trigger: AAGACCAGACAGGAAACAGCAAGAGTCCAAGAAAAA...CTCTGCTATAGTAGTATTCATCCACCCTTTAAATCTAGTTAGACTGCGCAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR GCA 90 bp | AATGCACACATAGGCAAAGTATTTGTAAGCTGTAGTTCTGAGGAATGCTCTATAAGCTTCTGTAACTCTTaGTCACTCCATTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NAHIGKVFVSCSSEECSISFCNS*SLHSSS Trigger: TGATGAAGAATGGAGTGAGCAAGAGTTACAGAAGCT...TATAGAGCATTCCTCAGAACTACAGCTTACAAATACTTTGCCTATGTGTGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTCAAAAGCCAGGTTTGTaGTTTGGAAGAGATGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PWLVISGCMMLKVFILVSQKPGL*FGRDVK Trigger: TTTTACATCTCTTCCAAAGCACAAACCTGGCTTTTG...AGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAGCCAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR GCA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTTGGACCTTGTTGGCTTaGTTTTTCTTAGAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVISGCMMLKVFILVSSSWTLLA*FFLEPC Trigger: ACATGGCTCTAAGAAAAAGCAAGCCAACAAGGTCCA...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTTCTGTGTATTTCTTCTaGCACTCATCAGCAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LVISGCMMLKVFILVSSSSVYFF*HSSAVR Trigger: TCGAACTGCTGATGAGTGCCAGAAGAAATACACAGA...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR TCA 90 bp | AATGCACACATAGGCAAAGTATTTGTAAGCTGTAGTTCTGAGGAATGCTCTATACTTGATGCTTTGCTTTaGAAAAGTCCGATATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NAHIGKVFVSCSSEECSILDALL*KSPIFL Trigger: AAGGAATATCGGACTTTTTCAAAGCAAAGCATCAAG...TATAGAGCATTCCTCAGAACTACAGCTTACAAATACTTTGCCTATGTGTGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCTACTTCATTCTCTTCACTTGACAAATGTGATGAGGACCGGCAATACTGTCATAAGTACAATCAATaGCTCCCAAAACAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISTSFSSLDKCDEDRQYCHKYNQ*LPKQMC Trigger: ACACATTTGTTTTGGGAGGCATTGATTGTACTTATG...ACAGTATTGCCGGTCCTCATCACATTTGTCAAGTGAAGAGAATGAAGTAGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTCCTAAGTTCATTGTGTTTAATCCGCTCTATAATTACATTGCTATGCCAATTCTTTATGGGATCTTaGAGAATAGTTCTTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVLSSLCLIRSIITLLCQFFMGS*RIVLLD Trigger: GTCCAGAAGAACTATTCTTCAAGATCCCATAAAGAA...TTGGCATAGCAATGTAATTATAGAGCGGATTAAACACAATGAACTTAGGACCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124201.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTAGTTCCATGTATATCTaGGTCACTTTCTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LVISGCMMLKVFILVSSSSSMYI*VTFFLM Trigger: CATCAAGAAGAAAGTGACTCAGATATACATGGAACT...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR GCA 90 bp | AATGCACACATAGGCAAAGTATTTGTAAGCTGTAGTTCTGAGGAATGCTCTATAGTCACGCTGTACTTTTaGTTTCATTCTTTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NAHIGKVFVSCSSEECSIVTLYF*FHSLKD Trigger: ATCTTTCAAAGAATGAAAGCAAAAGTACAGCGTGAC...TATAGAGCATTCCTCAGAACTACAGCTTACAAATACTTTGCCTATGTGTGCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR GCA 90 bp | TATTTGCGCAGTCTAACTAGATTTAAAGGGTGGATGAATACTACTATAGCAGAGATGCCTTCTTTGAAATaGACGAAGCTGAAACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLRSLTRFKGWMNTTIAEMPSLK*TKLKHF Trigger: AAAATGTTTCAGCTTCGTGCATTTCAAAGAAGGCAT...CTCTGCTATAGTAGTATTCATCCACCCTTTAAATCTAGTTAGACTGCGCAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR GCA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTCATAAGTACAATCAATaGCTCCCAAAACAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVISGCMMLKVFILVSSSHKYNQ*LPKQMC Trigger: ACACATTTGTTTTGGGAGGCATTGATTGTACTTATG...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTATATCTTTTGTGATGTaGTTTGTGTTTTCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVISGCMMLKVFILVSSSISFVM*FVFSLS Trigger: GGAGAGAGAAAACACAAACCACATCACAAAAGATAT...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS CCA 90 bp | TGTTTTCGGGATCCTTGGCCTTGGGGTTCTTCTGTGTATTTCTTCTaGCACTCATCAGCAGTTCGAGAACCTACTGCCATAGCCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: CFRDPWPWGSSVYFF*HSSAVREPTAIATS Trigger: AGATGTGGCTATGGCAGTAGGTTCTCGAACTGCTGATGAGTGCCAGAAGAAATACACAGAAGAACCCCAAGGCCAAGGATCCCGAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS TCA 90 bp | CTGGCACTCATCAGCAGTTCGAGAACCTACTGCCATAGCCACATCTaGCCAAAAGCCAGGTTTGTGCTTTGGAAGAGATGTAAAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LALISSSRTYCHSHI*PKARFVLWKRCKST Trigger: TGTGCTTTTACATCTCTTCCAAAGCACAAACCTGGCTTTTGGTCAGATGTGGCTATGGCAGTAGGTTCTCGAACTGCTGATGAGTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS TCA 90 bp | CTTATCCGTGTTAGGAGGAAAGTCTTTGGTGTGTTCACCCTGTGGTaGTCCCAACATGCTACTGCTCCTTGTCAGTTGTTCTTGTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIRVRRKVFGVFTLW*SQHATAPCQLFLFV Trigger: GACAAACAAGAACAACTGACAAGGAGCAGTAGCATGTTGGGATCACCACAGGGTGAACACACCAAAGACTTTCCTCCTAACACGGATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
||
| CDS GCA 90 bp | GAAAGTCTTTGGTGTGTTCACCCTGTGGTGATCCCAACATGCTACTaGTCCTTGTCAGTTGTTCTTGTTTGTCACGCTGTACTTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ESLWCVHPVVIPTCY*SLSVVLVCHAVLLL Trigger: AAGCAAAAGTACAGCGTGACAAACAAGAACAACTGACAAGGAGCAGTAGCATGTTGGGATCACCACAGGGTGAACACACCAAAGACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
||
| CDS GCA 90 bp | CGAGAACCTACTGCCATAGCCACATCTGACCAAAAGCCAGGTTTGTaGTTTGGAAGAGATGTAAAAGCACAATGTAGCTTCTGTAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: REPTAIATSDQKPGL*FGRDVKAQCSFCNS Trigger: AGAGTTACAGAAGCTACATTGTGCTTTTACATCTCTTCCAAAGCACAAACCTGGCTTTTGGTCAGATGTGGCTATGGCAGTAGGTTCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | ATATGTCTGGCAGTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTGTTCTTGGTTCAGAATaGGAGGATCTCCCAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ICLAVIMSHSLQSSLVLPVLGSE*EDLPMK Trigger: CTTCATTGGGAGATCCTCCAATTCTGAACCAAGAAC...AGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAGACATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCGTTTTTCTTGGACTCTaGCTGTTTCCTGTCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSIFQSTILTLAPYLVFLGL*LFPVWS Trigger: AGACCAGACAGGAAACAGCAAGAGTCCAAGAAAAAC...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTCGTGATGCTGGCCTTTaGGAGGACATAAGTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLRDAGL*EDISFF Trigger: AAAGAAACTTATGTCCTCCAAAAGGCCAGCATCACG...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCGACCAAAAGCCAGGTTaGTGCTTTGGAAGAGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSIFQSTILTLAPYLDQKPG*CFGRDV Trigger: TACATCTCTTCCAAAGCACAAACCTGGCTTTTGGTC...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCGCTGAAATGCTGACATaGTGGAGTAGTGCTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSIFQSTILTLAPYLAEMLT*WSSASQ Trigger: TTGAGAAGCACTACTCCACAATGTCAGCATTTCAGC...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS TCA 90 bp | GTGTTCTTTTTGGACACAGTGATCCTAACAGGACTCTCTTTTGAATaGAGAACTTGTCCGCCAAACTGGGCTCTAGTTAATGCCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VFFLDTVILTGLSFE*RTCPPNWALVNAFF Trigger: AAAGAAGGCATTAACTAGAGCCCAGTTTGGCGGACAAGTTCTTCATTCAAAAGAGAGTCCTGTTAGGATCACTGTGTCCAAAAAGAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS-3UTR CAA 90 bp | CATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAATCCCACTCTATGTTCAAAGCCTTGTCAGTTGTTCTaGTTTGTCACGCTGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSLQSSLVLPSNPTLCSKPCQLF*FVTLYF Trigger: AAAGTACAGCGTGACAAACAAGAACAACTGACAAGG...CTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CAA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCGGATTGGACCGACGTTaGTTTTTCCTCACAGATATA | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSIFQSTILTLAPYLGLDRR*FFLTDI Trigger: TATATCTGTGAGGAAAAACAAACGTCGGTCCAATCC...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | CATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAATCCCACTCTATGTTCAAAGGGATTGGACCGACGTTaGTTTTTCCTCACAGATATA | + |
|
Preference number: 5 (lower is better) Translates to: HSLQSSLVLPSNPTLCSKGLDRR*FFLTDI Trigger: TATATCTGTGAGGAAAAACAAACGTCGGTCCAATCC...CTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
||
| CDS-3UTR CAA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTATCATTGGTGAGCATTaGTTTACTTTTCGGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLIIGEH*FTFRAR Trigger: CCTTGCCCGAAAAGTAAACAAATGCTCACCAATGAT...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTCTTCATTCTCTTCACTaGACAAATGTGATGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLLHSLH*TNVMRT Trigger: GGTCCTCATCACATTTGTCAAGTGAAGAGAATGAAG...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | AATGCACACATAGGCAAAGTATTTGTAAGCTGTAGTTCTGAGGAATGCTCTATATCGGGATCCTTGGCCTaGGGGTTCTTCTGTGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: NAHIGKVFVSCSSEECSISGSLA*GFFCVF Trigger: AAATACACAGAAGAACCCCAAGGCCAAGGATCCCGA...TATAGAGCATTCCTCAGAACTACAGCTTACAAATACTTTGCCTATGTGTGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTACAGGGCTTTCCGTGTaGGTGGTGGAGATGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVISGCMMLKVFILVSSSTGLSV*VVEMRD Trigger: ATCTCTCATCTCCACCACCAACACGGAAAGCCCTGT...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS CCA 90 bp | TTTGTTCTTGGTTCAGAATTGGAGGATCTCCCAATGAAGGGTCATTaGATTGGACCGACGTTTGTTTTTCCTCACAGATATAGGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FVLGSELEDLPMKGH*IGPTFVFPHRYRFV Trigger: AACAAACCTATATCTGTGAGGAAAAACAAACGTCGGTCCAATCCAATGACCCTTCATTGGGAGATCCTCCAATTCTGAACCAAGAACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
||
| CDS-3UTR CAA 90 bp | TATTTGCGCAGTCTAACTAGATTTAAAGGGTGGATGAATACTACTATAGCAGAGTTAGGAGGAAAGTCTTaGGTGTGTTCACCCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YLRSLTRFKGWMNTTIAELGGKS*VCSPCG Trigger: ACCACAGGGTGAACACACCAAAGACTTTCCTCCTAA...CTCTGCTATAGTAGTATTCATCCACCCTTTAAATCTAGTTAGACTGCGCAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCCTCACAGATATAGGTTaGTTGCAACTGAGCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSIFQSTILTLAPYLLTDIG*LQLSFL Trigger: AAGAAAGCTCAGTTGCAACAAACCTATATCTGTGAG...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCTTGCAGTCCTTTCTGTaGTCACATCATTATCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSIFQSTILTLAPYLLQSFL*SHHYQK Trigger: CTTCTGATAATGATGTGACAACAGAAAGGACTGCAA...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | TATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAATCCCACTCTATGTTGCAGTCCTTTCTGTaGTCACATCATTATCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YVTFIAVLLGIAFKSHSMLQSFL*SHHYQK Trigger: CTTCTGATAATGATGTGACAACAGAAAGGACTGCAA...CATAGAGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTGGCAGTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAAGGTCCTAAGTTCATaGTGTTTAATCCGCTCTATA | + |
|
Preference number: 5 (lower is better) Translates to: CLAVIMSHSLQSSLVLPSKVLSS*CLIRSI Trigger: TATAGAGCGGATTAAACACAATGAACTTAGGACCTT...TGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCACTGCCAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
||
| CDS-3UTR CAA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTGATTCAGCCTTTCTTTaGTATTTCTTGCTCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLDSAFL*YFLLWF Trigger: GAACCAGAGCAAGAAATACAAAAGAAAGGCTGAATC...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCTCACCATTTTGGACCTaGTTGGCTTGCTTTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSIFQSTILTLAPYLSPFWT*LACFFL Trigger: TAAGAAAAAGCAAGCCAACAAGGTCCAAAATGGTGA...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | CCCTGGCTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTGTCTTTCTCACCATTTaGGACCTTGTTGGCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWLVISGCMMLKVFILVSVFLTI*DLVGLL Trigger: AAGCAAGCCAACAAGGTCCAAAATGGTGAGAAAGAC...AGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAGCCAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCATTCTAGTATCTTCCAGTCCACAATCTTAACTCTGGCCCCTTACCTCCATCATGGTTGTCTTTaGCCAAATGTTCTAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSIFQSTILTLAPYLHHGCL*PNVLGN Trigger: ATTGCCTAGAACATTTGGCAAAAGACAACCATGATG...GAGGTAAGGGGCCAGAGTTAAGATTGTGGACTGGAAGATACTAGAATGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS TCA 90 bp | CTTTCCTTCAGTGAGAAAGTCCTTGCTAACAGCAGATTTGTAATGTaGCTCTTTAGCAGAAGATCGAGGTCTCTTTGGTGTGATATAACA | + |
|
Preference number: 5 (lower is better) Translates to: LSFSEKVLANSRFVM*LFSRRSRSLWCDIT Trigger: TGTTATATCACACCAAAGAGACCTCGATCTTCTGCTAAAGAGTCACATTACAAATCTGCTGTTAGCAAGGACTTTCTCACTGAAGGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
||
| CDS-3UTR CAA 90 bp | CTATCAGATAGATATAGCAGGGCTGAAGAATACAACAGAACCTGTCCACAGCTTAGGCATATTTCTTCTTaGCAATGTTCCAGAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: LSDRYSRAEEYNRTCPQLRHISS*QCSRRQ Trigger: TTGTCTTCTGGAACATTGCAAAGAAGAAATATGCCT...AAGCTGTGGACAGGTTCTGTTGTATTCTTCAGCCCTGCTATATCTATCTGATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | TATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAATCCCACTCTATGAGGCATATTTCTTCTTaGCAATGTTCCAGAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: YVTFIAVLLGIAFKSHSMRHISS*QCSRRQ Trigger: TTGTCTTCTGGAACATTGCAAAGAAGAAATATGCCT...CATAGAGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTCCTTGTCAGTTGTTCTaGTTTGTCACGCTGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PWLVISGCMMLKVFILVSPCQLF*FVTLYF Trigger: AAAGTACAGCGTGACAAACAAGAACAACTGACAAGG...AGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAGCCAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | CTTGGTATTGCCTTCAAATCCCACTCTATGTTCAAAGGTCTCTTGAGACTTACTCTCACAGATATAGGTTaGTTGCAACTGAGCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGIAFKSHSMFKGLLRLTLTDIG*LQLSFL Trigger: AAGAAAGCTCAGTTGCAACAAACCTATATCTGTGAG...AGTAAGTCTCAAGAGACCTTTGAACATAGAGTGGGATTTGAAGGCAATACCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CAA 90 bp | TATTTGCGCAGTCTAACTAGATTTAAAGGGTGGATGAATACTACTATAGCAGAGGTTCTTGGTTCAGAATaGGAGGATCTCCCAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YLRSLTRFKGWMNTTIAEVLGSE*EDLPMK Trigger: CTTCATTGGGAGATCCTCCAATTCTGAACCAAGAAC...CTCTGCTATAGTAGTATTCATCCACCCTTTAAATCTAGTTAGACTGCGCAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | GTGATTATGTCACATTCATTGCAGTCCTCCTTGGTATTGCCTTCAAATCCCACTCAACAGTTTCAAGCTTaGTACATTTTCTTTGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VIMSHSLQSSLVLPSNPTQQFQA*YIFFET Trigger: GGTCTCAAAGAAAATGTACAAAGCTTGAAACTGTTG...AGTGGGATTTGAAGGCAATACCAAGGAGGACTGCAATGAATGTGACATAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CAA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTCAGTCCTCCTTGGTATaGCCTTCAAATCCCACTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LVISGCMMLKVFILVSSSQSSLV*PSNPTL Trigger: TAGAGTGGGATTTGAAGGCAATACCAAGGAGGACTG...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTTCATTGCAGTCCTCCTaGGTATTGCCTTCAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVISGCMMLKVFILVSSSSLQSS*VLPSNP Trigger: GGGATTTGAAGGCAATACCAAGGAGGACTGCAATGA...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTATTATGTCACATTCATaGCAGTCCTCCTTGGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: PWLVISGCMMLKVFILVSIMSHS*QSSLVL Trigger: CAATACCAAGGAGGACTGCAATGAATGTGACATAAT...AGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAGCCAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTTGGCAACTGAATTCTTaGTTTCTGCAAGGGTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVISGCMMLKVFILVSSSWQLNS*FLQGCC Trigger: GCAACACCCTTGCAGAAACAAAGAATTCAGTTGCCA...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTCAACAGTTTCAAGCTTaGTACATTTTCTTTGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PWLVISGCMMLKVFILVSQQFQA*YIFFET Trigger: GGTCTCAAAGAAAATGTACAAAGCTTGAAACTGTTG...AGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAGCCAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTAAGGTCCTAAGTTCATaGTGTTTAATCCGCTCTATA | + |
|
Preference number: 5 (lower is better) Translates to: PWLVISGCMMLKVFILVSKVLSS*CLIRSI Trigger: TATAGAGCGGATTAAACACAATGAACTTAGGACCTT...AGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAGCCAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | AATGCACACATAGGCAAAGTATTTGTAAGCTGTAGTTCTGAGGAATGCTCTATAACAAATGTGTTCTTTTaGGACACAGTGATCCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: NAHIGKVFVSCSSEECSITNVFF*DTVILT Trigger: TGTTAGGATCACTGTGTCCAAAAAGAACACATTTGT...TATAGAGCATTCCTCAGAACTACAGCTTACAAATACTTTGCCTATGTGTGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTCAGTTTTCTGCAGTTTaGAGGGCAACTTGTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVISGCMMLKVFILVSSSQFSAV*RATCSF Trigger: AAAAGAACAAGTTGCCCTCAAAACTGCAGAAAACTG...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS-3UTR CAA 90 bp | AAAGTCCGATATTCCTTCAATAGAGAGACTGTAGTCTATACATCTTTGCTCTATACAAATGTGTTCTTTTaGGACACAGTGATCCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: KVRYSFNRETVVYTSLLYTNVFF*DTVILT Trigger: TGTTAGGATCACTGTGTCCAAAAAGAACACATTTGT...ATAGAGCAAAGATGTATAGACTACAGTCTCTCTATTGAAGGAATATCGGACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222244.2 |
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| CDS-3UTR CAA 90 bp | AAGGTCCTAAGTTCATTGTGTTTAATCCGCTCTATAATTACATTGCTATGCCAACAACAGTTTCAAGCTTaGTACATTTTCTTTGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KVLSSLCLIRSIITLLCQQQFQA*YIFFET Trigger: GGTCTCAAAGAAAATGTACAAAGCTTGAAACTGTTG...TTGGCATAGCAATGTAATTATAGAGCGGATTAAACACAATGAACTTAGGACCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124201.2 |
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| CDS-3UTR CAA 90 bp | CTTGTAATTTCAGGCTGCATGATGCTAAAAGTTTTCATTCTAGTATCTTCCAGTTTAAGAGTTCCCACTTaGGCAGTTATCTTAATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVISGCMMLKVFILVSSSLRVPT*AVILIV Trigger: GACTATTAAGATAACTGCCAAAGTGGGAACTCTTAA...ACTGGAAGATACTAGAATGAAAACTTTTAGCATCATGCAGCCTGAAATTACAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS GCA 72 bp | TGGTGTGTTCACCCTGTGGTGATCCCAACATGCTACTaGTCCTTGTCAGTTGTTCTTGTTTGTCACGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: WCVHPVVIPTCY*SLSVVLVCHAV Trigger: TACAGCGTGACAAACAAGAACAACTGACAAGGAGCAGTAGCATGTTGGGATCACCACAGGGTGAACACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS TCA 72 bp | CTTTCTATAGCGGCTAGCATGCTGGGGCTGAAATGCTaGCATTGTGGAGTAGTGCTTCTCAATGGTGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LSIAASMLGLKC*HCGVVLLNGEV Trigger: TACTTCACCATTGAGAAGCACTACTCCACAATGTCAGCATTTCAGCCCCAGCATGCTAGCCGCTATAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS GCA 72 bp | AGTCTTTGGTGTGTTCACCCTGTGGTGATCCCAACATaGTACTGCTCCTTGTCAGTTGTTCTTGTTTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLWCVHPVVIPT*YCSLSVVLVCH Trigger: GTGACAAACAAGAACAACTGACAAGGAGCAGTAGCATGTTGGGATCACCACAGGGTGAACACACCAAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS CAA 90 bp | CTTTGGTGTGTTCACCCTGTGGTGATCCCAACATGCTACTGCTCCTaGTCAGTTGTTCTTGTTTGTCACGCTGTACTTTTGCTTTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LWCVHPVVIPTCYCS*SVVLVCHAVLLLSF Trigger: GAATGAAAGCAAAAGTACAGCGTGACAAACAAGAACAACTGACAAGGAGCAGTAGCATGTTGGGATCACCACAGGGTGAACACACCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS TCA 72 bp | CTTTTTGGACACAGTGATCCTAACAGGACTCTCTTTTaGATGAAGAACTTGTCCGCCAAACTGGGCTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LFGHSDPNRTLF*MKNLSAKLGSS Trigger: ACTAGAGCCCAGTTTGGCGGACAAGTTCTTCATTCAAAAGAGAGTCCTGTTAGGATCACTGTGTCCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS CCA 72 bp | GGTTCAGAATTGGAGGATCTCCCAATGAAGGGTCATTaGATTGGACCGACGTTTGTTTTTCCTCACAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: GSELEDLPMKGH*IGPTFVFPHRY Trigger: ATATCTGTGAGGAAAAACAAACGTCGGTCCAATCCAATGACCCTTCATTGGGAGATCCTCCAATTCTGAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS CCA 72 bp | TTTTTCTTAGAGCCATGTTTTCGGGATCCTTGGCCTTaGGGTTCTTCTGTGTATTTCTTCTGGCACTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: FFLEPCFRDPWP*GSSVYFFWHSS Trigger: TGATGAGTGCCAGAAGAAATACACAGAAGAACCCCAAGGCCAAGGATCCCGAAAACATGGCTCTAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CAA 72 bp | TGGTTCAGAATTGGAGGATCTCCCAATGAAGGGTCATaGGATTGGACCGACGTTTGTTTTTCCTCACAGATA | + |
|
Preference number: 6 (lower is better) Translates to: WFRIGGSPNEGS*DWTDVCFSSQI Trigger: TATCTGTGAGGAAAAACAAACGTCGGTCCAATCCAATGACCCTTCATTGGGAGATCCTCCAATTCTGAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS TCA 72 bp | TTGGACACAGTGATCCTAACAGGACTCTCTTTTGAATaGAGAACTTGTCCGCCAAACTGGGCTCTAGTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: LDTVILTGLSFE*RTCPPNWALVN Trigger: ATTAACTAGAGCCCAGTTTGGCGGACAAGTTCTTCATTCAAAAGAGAGTCCTGTTAGGATCACTGTGTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS CCA 72 bp | ATAGTCTTGGCATCAGCACTGTCTTTCTCACCATTTTaGACCTTGTTGGCTTGCTTTTTCTTAGAGCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: IVLASALSFSPF*TLLACFFLEPC Trigger: ACATGGCTCTAAGAAAAAGCAAGCCAACAAGGTCCAAAATGGTGAGAAAGACAGTGCTGATGCCAAGACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CAA 72 bp | TTGGACCGACGTTTGTTTTTCCTCACAGATATAGGTTaGTTGCAACTGAGCTTTCTTATCCGTGTTAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LDRRLFFLTDIG*LQLSFLIRVRR Trigger: CCTCCTAACACGGATAAGAAAGCTCAGTTGCAACAAACCTATATCTGTGAGGAAAAACAAACGTCGGTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS CAA 72 bp | AATAGTCTTGGCATCAGCACTGTCTTTCTCACCATTTaGGACCTTGTTGGCTTGCTTTTTCTTAGAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: NSLGISTVFLTI*DLVGLLFLRAM Trigger: CATGGCTCTAAGAAAAAGCAAGCCAACAAGGTCCAAAATGGTGAGAAAGACAGTGCTGATGCCAAGACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CAA 90 bp | CGTTTCCTTTTAAGAGTTCCCACTTTGGCAGTTATCTTAATAGTCTaGGCATCAGCACTGTCTTTCTCACCATTTTGGACCTTGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RFLLRVPTLAVILIV*ASALSFSPFWTLLA Trigger: AGCCAACAAGGTCCAAAATGGTGAGAAAGACAGTGCTGATGCCAAGACTATTAAGATAACTGCCAAAGTGGGAACTCTTAAAAGGAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CAA 72 bp | GACCGACGTTTGTTTTTCCTCACAGATATAGGTTTGTaGCAACTGAGCTTTCTTATCCGTGTTAGGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: DRRLFFLTDIGL*QLSFLIRVRRK Trigger: TTTCCTCCTAACACGGATAAGAAAGCTCAGTTGCAACAAACCTATATCTGTGAGGAAAAACAAACGTCGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS CAA 72 bp | TCCCTCATTTGTCGTTTCCTTTTAAGAGTTCCCACTTaGGCAGTTATCTTAATAGTCTTGGCATCAGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SLICRFLLRVPT*AVILIVLASAL Trigger: CAGTGCTGATGCCAAGACTATTAAGATAACTGCCAAAGTGGGAACTCTTAAAAGGAAACGACAAATGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CAA 90 bp | AGTTATCTTAATAGTCTTGGCATCAGCACTGTCTTTCTCACCATTTaGGACCTTGTTGGCTTGCTTTTTCTTAGAGCCATGTTTTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SYLNSLGISTVFLTI*DLVGLLFLRAMFSG Trigger: TCCCGAAAACATGGCTCTAAGAAAAAGCAAGCCAACAAGGTCCAAAATGGTGAGAAAGACAGTGCTGATGCCAAGACTATTAAGATAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CAA 90 bp | TCTAGGCAATCCCTCATTTGTCGTTTCCTTTTAAGAGTTCCCACTTaGGCAGTTATCTTAATAGTCTTGGCATCAGCACTGTCTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRQSLICRFLLRVPT*AVILIVLASALSFS Trigger: TGAGAAAGACAGTGCTGATGCCAAGACTATTAAGATAACTGCCAAAGTGGGAACTCTTAAAAGGAAACGACAAATGAGGGATTGCCTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CCA 72 bp | TCAGTTTCTGAAATGAGGAGGATATCTTTTGTGATGTaGTTTGTGTTTTCTCTCTCCCGATTCAGCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVSEMRRISFVM*FVFSLSRFSLS Trigger: AGAAAGGCTGAATCGGGAGAGAGAAAACACAAACCACATCACAAAAGATATCCTCCTCATTTCAGAAACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CCA 72 bp | TCTCTTTGGTGTGATATAACAAGATCGAGGTCTCTTTaGTGTGATATAACAAGCTCTCTCACCTTCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLWCDITRSRSL*CDITSSLTFSF Trigger: GAAACTGAAGGTGAGAGAGCTTGTTATATCACACCAAAGAGACCTCGATCTTGTTATATCACACCAAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CAA 72 bp | GCTATTATCATTAAGGTCATACGTGATGCTGGCCTTTaGGAGGACATAAGTTTCTTTATCTTCTGCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AIIIKVIRDAGL*EDISFFIFCIF Trigger: AAAGATGCAGAAGATAAAGAAACTTATGTCCTCCAAAAGGCCAGCATCACGTATGACCTTAATGATAATAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS CAA 90 bp | TGCTACTGCTCCTTGTCAGTTGTTCTTGTTTGTCACGCTGTACTTTaGCTTTCATTCTTTGAAAGATTTTACCTGGTGATTCATAAATCA | + |
|
Preference number: 6 (lower is better) Translates to: CYCSLSVVLVCHAVL*LSFFERFYLVIHKS Trigger: TGATTTATGAATCACCAGGTAAAATCTTTCAAAGAATGAAAGCAAAAGTACAGCGTGACAAACAAGAACAACTGACAAGGAGCAGTAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS CAA 90 bp | TCATCAATGAAATACTTTGAAATATCAGTGTTTTTACCTAAATCTTaGTTAAACAGGGCTTTCCGTGTTGGTGGTGGAGATGAGAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: SSMKYFEISVFLPKS*LNRAFRVGGGDERS Trigger: TGATCTCTCATCTCCACCACCAACACGGAAAGCCCTGTTTAACAAAGATTTAGGTAAAAACACTGATATTTCAAAGTATTTCATTGATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052201.9 |
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| CDS TCA 72 bp | TCTTTTACAACAGTTTCAAGCTTTGTACATTTTCTTTaGGACCGGCCAGATAGTGTTAAATTAGGTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SFTTVSSFVHFL*DRPDSVKLGLG Trigger: TCCAAGACCTAATTTAACACTATCTGGCCGGTCTCAAAGAAAATGTACAAAGCTTGAAACTGTTGTAAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052201.9 ENSMUST00000124201.2 ENSMUST00000221296.2 ENSMUST00000222244.2 |
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| CDS GCA 72 bp | CATCATCTCTTCATTTGGTTCTGTAATATCCTCTTTTaGAGTCCTTTCTGTTGTCACATCATTATCAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HHLFIWFCNILF*SPFCCHIIIRS Trigger: ACTTCTGATAATGATGTGACAACAGAAAGGACTGCAAAAGAGGATATTACAGAACCAAATGAAGAGATGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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| CDS GCA 72 bp | AAACATAAATTTTCTTGTGAGATAACAGGGATATCCTaGTTCTTTCATGGAGACCGAGTCTATCAATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KHKFSCEITGIS*FFHGDRVYQSF Trigger: AAAGGATTGATAGACTCGGTCTCCATGAAAGAAGCAGGATATCCCTGTTATCTCACAAGAAAATTTATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052201.9 ENSMUST00000221296.2 ENSMUST00000222244.2 |
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| CDS CAA 72 bp | ACCAGCTTTCCTTCTACACATATAGCAGTATTATTATaGATGACTTTAATCATCCATTCCTGTAGGTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: TSFPSTHIAVLL*MTLIIHSCRWT Trigger: AGTCCACCTACAGGAATGGATGATTAAAGTCATCAATAATAATACTGCTATATGTGTAGAAGGAAAGCTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052201.9 ENSMUST00000221296.2 ENSMUST00000222244.2 |
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| CDS TCA 72 bp | CTGTTTGGAAGGGTAGCCTCTGATAACATGGTGGATTaGAATAGATCTTTATTGTTAGAAGTTCTTATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFGRVASDNMVD*NRSLLLEVLIS Trigger: AGAAATAAGAACTTCTAACAATAAAGATCTATTTCAATCCACCATGTTATCAGAGGCTACCCTTCCAAACAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052201.9 ENSMUST00000222244.2 |
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