Pregenerated sensors for MIOX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022613Ensembl transcript IDs: ENSMUST00000023282.9, ENSMUST00000162033.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGTGTACTGGCTCAGTaGTGGGAGGGTATTGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDGVLAQ*WEGIGN Trigger: GTTTCCAATACCCTCCCACCACTGAGCCAGTACACC...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR GCA 90 bp | CTAGGTGTACTGGCTCAGTGGTGGGAGGGTATTGGAAACCATTCACCAGCTCAGATCAAATTGAACTCTTaGACCCAGGGCAGCATATCC | + |
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Preference number: 4 (lower is better) Translates to: LGVLAQWWEGIGNHSPAQIKLNS*TQGSIS Trigger: GGATATGCTGCCCTGGGTGCAAGAGTTCAATTTGAT...CTGAGCTGGTGAATGGTTTCCAATACCCTCCCACCACTGAGCCAGTACACCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162033.2 |
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| CDS-3UTR CCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATCAGTCCTTGTCCGGGTaGGCTTTCCGGATGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDQSLSG*AFRMPS Trigger: GGAGGGCATCCGGAAAGCCCACCCGGACAAGGACTG...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGACCAGGGAAGGGTCTaGGCCCACATCGACCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDDQGRV*AHIDLH Trigger: ATGAAGGTCGATGTGGGCCCAGACCCTTCCCTGGTC...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGCGGTCTGGAACGCGTaGAAGGAGTTGGGGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDAVWNA*KELGKS Trigger: AGATTTCCCCAACTCCTTCCACGCGTTCCAGACCGC...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR TCA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGCATGTAGAAGGCCTCTaGAGGCAGGGAGAACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGHVEGL*RQGELV Trigger: AACAAGTTCTCCCTGCCTTCAGAGGCCTTCTACATG...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR GCA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGAGTGAGGCTGGTACATaGCGAGTTCTGTGCTGTATC | + |
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Preference number: 4 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGSEAGT*RVLCCI Trigger: GATACAGCACAGAACTCGGCATGTACCAGCCTCACT...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CCA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGAGCTGTCCTTGCTTTTaGCCATCTCTGGGTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGSCPCF*PSLGPH Trigger: ATGTGGACCCAGAGATGGCCAAAAGCAAGGACAGCT...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATACGCGTGGAAGGAGTTaGGGAAATCTACGTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDTRGRS*GNLRLG Trigger: ACCCAGACGTAGATTTCCCCAACTCCTTCCACGCGT...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR TCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATTGCCCACAGCCTCCATaGTGGTCATCTTCTTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDCPQPP*WSSSCK Trigger: CTTACAAGAAGATGACCATCATGGAGGCTGTGGGCA...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR GCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATACATGCCGAGTTCTGTaGTGTATCGAGGATCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDTCRVL*CIEDPG Trigger: TCCAGGATCCTCGATACAGCACAGAACTCGGCATGT...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR GCA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGAACTTGTTGAACTCTTaGACCCAGGGCAGCATATCC | + |
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Preference number: 4 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGNLLNS*TQGSIS Trigger: GGATATGCTGCCCTGGGTGCAAGAGTTCAACAAGTT...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CCA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGTATAGGTACTCATCATaGCCCCAGGACATAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGYRYSS*PQDIRT Trigger: CGTCCTTATGTCCTGGGGCCATGATGAGTACCTATA...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR TCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATAAGTCCACAGTCTGGTaGGTGTGCATGAGCTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDKSTVW*VCMSLY Trigger: ATACAAGCTCATGCACACTCACCAGACTGTGGACTT...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATAGGTCAGGATTGTCCTaGAAAGTAGAGTCACAGAAC | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDRSGLS*KVESQN Trigger: GTTCTGTGACTCTACTTTCCAGGACAATCCTGACCT...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CCA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATTTGAACTTCATCATCTaGTATAGGTACTCATCATGG | + |
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Preference number: 4 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDLNFII*YRYSSW Trigger: CCATGATGAGTACCTATACCAGATGATGAAGTTCAA...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS GCA 90 bp | CACGATCCAGCAGCGGGCCTGAAGTATAGTTTCGGAAGCTGTCCTTaGTTTTGGCCATCTCTGGGTCCACATCGGGTCGATAGACCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HDPAAGLKYSFGSCP*FWPSLGPHRVDRPG Trigger: CCCTGGTCTATCGACCCGATGTGGACCCAGAGATGGCCAAAAGCAAGGACAGCTTCCGAAACTATACTTCAGGCCCGCTGCTGGATCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CAA 90 bp | AGGTGTACTGGCTCAGTGGTGGGAGGGTATTGGAAACCATTCACCAGCTCAGGGCGTGTAGAGATCAAATaGAACTCTTGCACCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: RCTGSVVGGYWKPFTSSGRVEIK*NSCTQG Trigger: GCCCTGGGTGCAAGAGTTCAATTTGATCTCTACACG...CCCTGAGCTGGTGAATGGTTTCCAATACCCTCCCACCACTGAGCCAGTACACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162033.2 |
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| CDS-3UTR CAA 90 bp | AGGTGTACTGGCTCAGTGGTGGGAGGGTATTGGAAACCATTCACCAGCTCAGGGGATCAAATTGAACTCTaGCACCCAGGGCAGCATATC | + |
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Preference number: 5 (lower is better) Translates to: RCTGSVVGGYWKPFTSSGDQIEL*HPGQHI Trigger: GATATGCTGCCCTGGGTGCAAGAGTTCAATTTGATC...CCCTGAGCTGGTGAATGGTTTCCAATACCCTCCCACCACTGAGCCAGTACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162033.2 |
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| CDS-3UTR CAA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGAGGTGGAACCAGTCCTaGTCCGGGTGGGCTTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGRWNQS*SGWAFR Trigger: CCGGAAAGCCCACCCGGACAAGGACTGGTTCCACCT...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CAA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGAACGCGTGGAAGGAGTaGGGGAAATCTACGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGNAWKE*GKSTSG Trigger: CCCAGACGTAGATTTCCCCAACTCCTTCCACGCGTT...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CAA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGTTTCGGAAGCTGTCCTaGCTTTTGGCCATCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGFRKLS*LLAISG Trigger: CCCAGAGATGGCCAAAAGCAAGGACAGCTTCCGAAA...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CAA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATAAGCTGTCCTTGCTTTaGGCCATCTCTGGGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDKLSLL*AISGST Trigger: TGTGGACCCAGAGATGGCCAAAAGCAAGGACAGCTT...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CAA 90 bp | CATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGGAAACTTGTTGAACTCTaGCACCCAGGGCAGCATATC | + |
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Preference number: 5 (lower is better) Translates to: HLFHSLLIPSKRDLNCDGKLVEL*HPGQHI Trigger: GATATGCTGCCCTGGGTGCAAGAGTTCAACAAGTTT...CCCATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS-3UTR CAA 90 bp | CGTCATCTCTTTCATTCTTTATTGATACCCAGCAAACGTGACCTCAATTGTGATGGCAGGGAGAACTTGTaGAACTTCATCATCTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: RHLFHSLLIPSKRDLNCDGRENL*NFIIWY Trigger: ATACCAGATGATGAAGTTCAACAAGTTCTCCCTGCC...ATCACAATTGAGGTCACGTTTGCTGGGTATCAATAAAGAATGAAAGAGATGACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS CCA 72 bp | TCCTGGAAAGTAGAGTCACAGAACACCACAGAGGCCTaGGGACGGCAGCCCACGGGGAACGTGTCTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: SWKVESQNTTEA*GRQPTGNVSPT Trigger: TGTTGGAGACACGTTCCCCGTGGGCTGCCGTCCCCAGGCCTCTGTGGTGTTCTGTGACTCTACTTTCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS GCA 72 bp | GCAGCGGGCCTGAAGTATAGTTTCGGAAGCTGTCCTTaGTTTTGGCCATCTCTGGGTCCACATCGGGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: AAGLKYSFGSCP*FWPSLGPHRVD Trigger: ATCGACCCGATGTGGACCCAGAGATGGCCAAAAGCAAGGACAGCTTCCGAAACTATACTTCAGGCCCGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS CCA 72 bp | GGCCTGAAGTATAGTTTCGGAAGCTGTCCTTGCTTTTaGCCATCTCTGGGTCCACATCGGGTCGATAGACCA | + |
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Preference number: 6 (lower is better) Translates to: GLKYSFGSCPCF*PSLGPHRVDRP Trigger: TGGTCTATCGACCCGATGTGGACCCAGAGATGGCCAAAAGCAAGGACAGCTTCCGAAACTATACTTCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS TCA 72 bp | GTAGGTCAGGGCACTTCGTGTAGAGATCAAACTTGTTaGACTCTTGCACCCAGGGCAGCATATCCAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VGQGTSCRDQTC*TLAPRAAYPGP Trigger: AGGACCTGGATATGCTGCCCTGGGTGCAAGAGTTCAACAAGTTTGATCTCTACACGAAGTGCCCTGACCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS TCA 72 bp | CGTCCACCAGATCATCCAGCATGCCCACAGCCTCCATaGTGGTCATCTTCTTGTAAGAGAAGCTTCCATACT | + |
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Preference number: 6 (lower is better) Translates to: RPPDHPACPQPP*WSSSCKRSFHT Trigger: AGTATGGAAGCTTCTCTTACAAGAAGATGACCATCATGGAGGCTGTGGGCATGCTGGATGATCTGGTGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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| CDS CCA 72 bp | TTGTTGAACTTCATCATCTGGTATAGGTACTCATCATaGCCCCAGGACATAAGGACGTTCTCTAGTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: LLNFIIWYRYSS*PQDIRTFSSPQ Trigger: CTGTGGACTAGAGAACGTCCTTATGTCCTGGGGCCATGATGAGTACCTATACCAGATGATGAAGTTCAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023282.9 |
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