Pregenerated sensors for MIOS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042447Ensembl transcript IDs: ENSMUST00000040017.8
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCTGACAGAATGCTTTATTTTTCCACGACAGCAAAGCCATGAGTaGCTTTATTTCCTGAACTATGAAGGACATCCTTTAAAAACTCCA | + |
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Preference number: 1 (lower is better) Translates to: ELTECFIFPRQQSHE*LYFLNYEGHPLKTP Trigger: TGGAGTTTTTAAAGGATGTCCTTCATAGTTCAGGAAATAAAGTCACTCATGGCTTTGCTGTCGTGGAAAAATAAAGCATTCTGTCAGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR-3UTR TCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAGTGACTTTATTTCCTaGACTATGAAGGACATCCTT | + |
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Preference number: 2 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDSDFIS*TMKDIL Trigger: AAGGATGTCCTTCATAGTTCAGGAAATAAAGTCACT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATACGACAGCAAAGCCATaGGTGACTTTATTTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNTTAKP*VTLFPE Trigger: TTCAGGAAATAAAGTCACTCATGGCTTTGCTGTCGT...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATATATCAATTTCAGATTaGAGATGCAGGCACAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNISISD*RCRHKA Trigger: GGCCTTGTGCCTGCATCTTCAATCTGAAATTGATAT...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATCAGCAAAGCCATGAGTaGCTTTATTTCCTGAACTAT | + |
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Preference number: 2 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNQQSHE*LYFLNY Trigger: ATAGTTCAGGAAATAAAGTCACTCATGGCTTTGCTG...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATCAAACATCACATTGCTaGGCTGACAGAATGCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNQTSHC*ADRMLY Trigger: ATAAAGCATTCTGTCAGCTCAGCAATGTGATGTTTG...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACGATATCAATTTCAGATaGAAGATGCAGGCACAAGGC | + |
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Preference number: 3 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDDINFR*KMQAQG Trigger: GCCTTGTGCCTGCATCTTCAATCTGAAATTGATATC...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR CCA 72 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTaGAGTTTTGAGGAAGACAAGAATGACCTATGTCAA | + |
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Preference number: 3 (lower is better) Translates to: RMLNQLTSLLLT*SFEEDKNDLCQ Trigger: TTGACATAGGTCATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR TCA 72 bp | TCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCTCTaGGGAGTACGTCAAAGTCACTCAAACATCACATTG | + |
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Preference number: 3 (lower is better) Translates to: SCSNVPISSVGL*GVRQSHSNITL Trigger: CAATGTGATGTTTGAGTGACTTTGACGTACTCCTCAGAGGCCAACGCTGCTGATAGGAACATTAGAACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR TCA 72 bp | GAGGAGTACGTCAAAGTCACTCAAACATCACATTGCTaGGCTGACAGAATGCTTTATTTTTCCACGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: EEYVKVTQTSHC*ADRMLYFSTTA Trigger: TGCTGTCGTGGAAAAATAAAGCATTCTGTCAGCTCAGCAATGTGATGTTTGAGTGACTTTGACGTACTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR TCA 72 bp | GAATGCTTTATTTTTCCACGACAGCAAAGCCATGAGTaGCTTTATTTCCTGAACTATGAAGGACATCCTTTA | + |
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Preference number: 3 (lower is better) Translates to: ECFIFPRQQSHE*LYFLNYEGHPL Trigger: TAAAGGATGTCCTTCATAGTTCAGGAAATAAAGTCACTCATGGCTTTGCTGTCGTGGAAAAATAAAGCATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACCAAGCAGGCCTGTCCTaGTTGGACACCATGCGACCT | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHQAGLS*LDTMRP Trigger: AGGTCGCATGGTGTCCAACCAGGACAGGCCTGCTTG...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| 3UTR CAA 72 bp | GCTCGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTaGAATCACTGCTTCCAACACATGGGACCGCACTTA | + |
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Preference number: 4 (lower is better) Translates to: ARPMLQQGSGDE*NHCFQHMGPHL Trigger: TAAGTGCGGTCCCATGTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACCATCCCCGATGGGAGTaGGTGTATGCTGCATATCAT | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHHPRWE*VYAAYH Trigger: ATGATATGCAGCATACACCCACTCCCATCGGGGATG...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACAGAGAAGCGTCATTCTaGCCTAACTCATACAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHREASF*PNSYSG Trigger: ACCGCTGTATGAGTTAGGGCAGAATGACGCTTCTCT...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACGCAAGAAGAAGTTTCTaGTCTCGTGGAAGCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHARRSF*SRGSQH Trigger: GTGTTGGCTTCCACGAGACCAGAAACTTCTTCTTGC...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACACAGGACACTCTGCATaGTCCCTGAACCAACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDTGHSA*SLNQLS Trigger: GCTGAGTTGGTTCAGGGACCATGCAGAGTGTCCTGT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR TCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACGCCGAATATCCAAGTTaGACAAAGCCACAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDAEYPS*TKPQQQ Trigger: CTGCTGCTGTGGCTTTGTTCAACTTGGATATTCGGC...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACCCTGTGCTAAAGGCTTaGAACTGGGATCCAGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDPVLKA*NWDPAY Trigger: GTAAGCTGGATCCCAGTTCCAAGCCTTTAGCACAGG...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR TCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACTATACCAGAGTGACTTaGGCTGTGGGTCTTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDYTRVT*AVGLHC Trigger: GCAATGAAGACCCACAGCTCAAGTCACTCTGGTATA...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACATCCAGTGGATTCCATaGAAGGGTATTGCATTGGCG | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDIQWIP*KGIALA Trigger: CGCCAATGCAATACCCTTGCATGGAATCCACTGGAT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR TCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACTCCAGCTTACTCCTATaGATATCAAATTCTGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHSSLLL*ISNSAL Trigger: AAGGGCAGAATTTGATATTCATAGGAGTAAGCTGGA...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACATGGGAGTGGGTGTATaGTGCATATCATACAGCCTA | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDMGVGV*CISYSL Trigger: TAGGCTGTATGATATGCAGCATACACCCACTCCCAT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACATCACTTTCTTCTTCTaGACACTCATACAAATGGCG | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHITFFF*TLIQMA Trigger: CGCCATTTGTATGAGTGTGCAGAAGAAGAAAGTGAT...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACGCTGTGGGTCTTCATTaGCAGCTAAAATGTGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDAVGLH*QLKCGF Trigger: GAAACCACATTTTAGCTGGCAATGAAGACCCACAGC...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACTCCAATTATGTCTGCTaGTTTCTACCATTCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHSNYVC*FLPFPK Trigger: CTTTGGGAATGGTAGAAAGCAGCAGACATAATTGGA...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACACATTTACACGTGCATaGAGATACAGGACACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDTFTRA*RYRTLC Trigger: GCAGAGTGTCCTGTATCTGCATGCACGTGTAAATGT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATTGGCTGGACAGTCTCTaGTGGCACCAGATTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNWLDSL*WHQISC Trigger: ACAGGAAATCTGGTGCCAGCAGAGACTGTCCAGCCA...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR TCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACCCATTGCCACCACATTaGGATTCAGATCTCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDPLPPH*DSDLLF Trigger: AAAAAGGAGATCTGAATCTCAATGTGGTGGCAATGG...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR TCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACAACCAGTTGTTAAACTaGGCTAACTTTTTGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHNQLLN*ANFLSL Trigger: CAAGGACAAAAAGTTAGCTCAGTTTAACAACTGGTT...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACTCTAAGATCCCATATTaGAACCTGACCTTCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHSKIPY*NLTFIE Trigger: TTCTATGAAGGTCAGGTTGCAATATGGGATCTTAGA...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACCACTCCAATTATGTCTaGTGCTTTCTACCATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDHSNYV*CFLPFP Trigger: TGGGAATGGTAGAAAGCAGCAGACATAATTGGAGTG...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACATTAATGAGGCAAAGTaGACATCGAGGAAGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDINEAK*TSRKGF Trigger: AAACCCCTTCCTCGATGTGCACTTTGCCTCATTAAT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACGCATACATTTACACGTaGATGCAGATACAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDAYIYT*MQIQDT Trigger: AGTGTCCTGTATCTGCATGCACGTGTAAATGTATGC...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACGTCTCACTTTTTCCATaGGAACAATATCAGGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: RPMLQQGSGDELNHCFQHVSLFP*EQYQEY Trigger: ATACTCCTGATATTGTTCCCATGGAAAAAGTGAGAC...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR TCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATTCCAGCTTTGAGTTCTaGATTCACAGCCGATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNSSFEF*IHSRFH Trigger: GTGGAATCGGCTGTGAATTCAGAACTCAAAGCTGGA...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR TCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACTCCTTTCAAATACAGTaGAGTCAGACATTGTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDSFQIQ*SQTLFG Trigger: ACCGAACAATGTCTGACTTCACTGTATTTGAAAGGA...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAACAGATAGGGGTTGTTaGGCTGCAGGCGCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPTDRGC*AAGAGC Trigger: GCACCCTGCGCCTGCAGCTCAACAACCCCTATCTGT...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACCTAGATTACGATGCATaGCAGCAAGAAGAAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDLDYDA*QQEEVS Trigger: AGAAACTTCTTCTTGCTGGCATGCATCGTAATCTAG...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACATTCAGGATTTGGATTaGTCGCCGAATATCCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDIQDLD*SPNIQV Trigger: AACTTGGATATTCGGCGAGCAATCCAAATCCTGAAT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATGCAAGGGTATTGCATTaGCGAGCATGCTTTGGAACA | + |
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Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNARVLH*RACFGT Trigger: TGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGC...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCTCCATGCAAGGGTATTaGATTGGCGAGCATGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLNSTNIHVLMFLSAALASMQGY*IGEHAL Trigger: CAAAGCATGCTCGCCAATGCAATACCCTTGCATGGA...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCAGATACAGGACACTCTaGATGGTCCCTGAACCAACT | + |
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Preference number: 4 (lower is better) Translates to: LLNSTNIHVLMFLSAALARYRTL*MVPEPT Trigger: AGTTGGTTCAGGGACCATGCAGAGTGTCCTGTATCT...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCGCACACTCATACAAATaGCGACCACAAGCCCACATT | + |
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Preference number: 4 (lower is better) Translates to: LLNSTNIHVLMFLSAALAAHSYK*RPQAHI Trigger: AATGTGGGCTTGTGGTCGCCATTTGTATGAGTGTGC...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR CCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATCTAAAGGCTTGGAACTaGGATCCAGCTTACTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNLKAWN*DPAYSY Trigger: ATAGGAGTAAGCTGGATCCCAGTTCCAAGCCTTTAG...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCATCAACTTGGTGTGGTaGCCACAAAATATCGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LLNSTNIHVLMFLSAALAINLVW*PQNIGL Trigger: AAGCCCGATATTTTGTGGGCACCACACCAAGTTGAT...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS-3UTR GCA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACCAGGAGTATATTTGCTaGAGATATCCCATATTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDQEYIC*RYPILE Trigger: TTCTAATATGGGATATCTGCAGCAAATATACTCCTG...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCACGGTTTCATCCCCGATaGGAGTGGGTGTATGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPRFHPR*EWVYAA Trigger: TGCAGCATACACCCACTCCCATCGGGGATGAAACCG...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CCA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCTCGATTTTGACTCGTTaGATGCCATGCAAAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNSTNIHVLMFLSAALASILTR*MPCKGS Trigger: GCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGA...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATCAGACATTGTTCGGTTaGGAGTCACAACTATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNQTLFG*ESQLSF Trigger: GAATGATAGTTGTGACTCCCAACCGAACAATGTCTG...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATTCCCATTCTCCTTCTTaGACAAGGGAGTTCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNSHSPS*TREFKN Trigger: ATTTTTGAACTCCCTTGTGCAAGAAGGAGAATGGGA...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATTTCTTTCAATTATTGTaGGTTCGGTTTCATCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNFFQLL*VRFHPR Trigger: TCGGGGATGAAACCGAACCCACAATAATTGAAAGAA...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCACAGAGTATACCAGAGTaGCTTGAGCTGTGGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPQSIPE*LELWVF Trigger: GAAGACCCACAGCTCAAGTCACTCTGGTATACTCTG...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAAGCCAGGGCAGCTTGTaGCTTTGGATTTTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPSQGSL*LWILLV Trigger: CACCAACAAAATCCAAAGTCACAAGCTGCCCTGGCT...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCACTCGTTGGATGCCATaGAAAGGAAGCAATGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLNSTNIHVLMFLSAALATRWMP*KGSNVI Trigger: AATTACATTGCTTCCTTTGCATGGCATCCAACGAGT...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATTATTGCTTCATAAAGTaGAGAGTATACCAGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNYCFIK*RVYQSD Trigger: GTCACTCTGGTATACTCTGCACTTTATGAAGCAATA...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATACAAATCTATCAACTTaGTGTGGTGCCCACAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNTNLST*CGAHKI Trigger: TATTTTGTGGGCACCACACCAAGTTGATAGATTTGT...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CCA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCTTGCCAGCTAAAATGTaGTTTCTCCAAACCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLNSTNIHVLMFLSAALALPAKM*FLQTCS Trigger: AGAACAGGTTTGGAGAAACCACATTTTAGCTGGCAA...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAGTAACGATCCAGCTTTaGGTTCTGAATTCACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPVTIQL*VLNSQP Trigger: CGGCTGTGAATTCAGAACTCAAAGCTGGATCGTTAC...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCACAGATCTCCTTTTTCTaGAGACGCCCCTTCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPQISFF*RRPFIQ Trigger: CTGAATGAAGGGGCGTCTTCAGAAAAAGGAGATCTG...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCCCAATGATCCTTTGTTaGCTGGAGATTTTTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNSTNIHVLMFLSAALAPMILC*LEIFDH Trigger: ATGATCAAAAATCTCCAGGCAACAAAGGATCATTGG...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCATTTGGATTTTGTTGGTaGGCCACTCACACCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPFGFCW*ATHTIL Trigger: CAGTATGGTGTGAGTGGCTCACCAACAAAATCCAAA...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAGAATTTACAAGCGAATaGCACTCTGTCACGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPEFTSE*HSVTYS Trigger: GCTGTACGTGACAGAGTGGCATTCGCTTGTAAATTC...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAAATTCTGCCCTTTTGTaGCAAAACCTCCAGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPNSALL*QNLQAS Trigger: AGATGCCTGGAGGTTTTGGCACAAAAGGGCAGAATT...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAACTATCATTCGATTTTaGCTCGTTGGATGCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPTIIRF*LVGCHA Trigger: TGCATGGCATCCAACGAGTCAAAATCGAATGATAGT...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAGGAGTGGGTGTATGCTaGATATCATACAGCCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPGVGVC*ISYSLI Trigger: TATTAGGCTGTATGATATGCAGCATACACCCACTCC...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAGTGAACCCTGTAACATaGAGTAACTTGCTGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPVNPVT*SNLLFE Trigger: TTCAAACAGCAAGTTACTGCATGTTACAGGGTTCAC...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAATTCAGGATCATAATTaGGATACCACGCAACACATT | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPIQDHN*DTTQHI Trigger: AATGTGTTGCGTGGTATCTCAATTATGATCCTGAAT...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR TCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAACAGCTGTAGGAGATTaGTTTGCCACAAAAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPTAVGD*FATKIT Trigger: TGTAATTTTTGTGGCAAATCAATCTCCTACAGCTGT...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCATTGCATTGGCGAGCATaGTTTGGAACAAATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPLHWRA*FGTNSF Trigger: AAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAA...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCATTGGCGAGCATGCTTTaGAACAAATTCTTTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPLASML*NKFFSY Trigger: ATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAA...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR GCA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAATGAATATCAAATTCTaGCCTTTTGTGCCAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YQFQIEDAGTRPVFILKPMNIKF*PFVPKP Trigger: AGGTTTTGGCACAAAAGGGCAGAATTTGATATTCAT...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS TCA 90 bp | GGGTTTCCGACAGCCAGGGCAGCTTGTGACTTTGGATTTTGTTGGTaGGCCACTCACACCATACTGACTAAACCCTCTGCCCTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GFPTARAACDFGFCW*ATHTILTKPSALMR Trigger: CCTCATCAGGGCAGAGGGTTTAGTCAGTATGGTGTGAGTGGCTCACCAACAAAATCCAAAGTCACAAGCTGCCCTGGCTGTCGGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACAAGTCAGCTCTGTGTTaGTCGAGACCAGCAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHKSALC*SRPAAS Trigger: GCTTGCTGCTGGTCTCGACAAACACAGAGCTGACTT...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 90 bp | ACCAGGACAGCTAGAAACAGGTGTTCCCATATTAATGAGGCAAAGTaGACATCGAGGAAGGGGTTTCCGACAGCCAGGGCAGCTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TRTARNRCSHINEAK*TSRKGFPTARAACD Trigger: GTCACAAGCTGCCCTGGCTGTCGGAAACCCCTTCCTCGATGTGCACTTTGCCTCATTAATATGGGAACACCTGTTTCTAGCTGTCCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACCGCCGAATATCCAAGTaGAACAAAGCCACAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHRRISK*NKATAA Trigger: TGCTGCTGTGGCTTTGTTCAACTTGGATATTCGGCG...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACCGTAACGATCCAGCTTaGAGTTCTGAATTCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHRNDPA*SSEFTA Trigger: GGCTGTGAATTCAGAACTCAAAGCTGGATCGTTACG...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACGTACAACTCGACCATTaGCTTGTCCAACTGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHVQLDH*LVQLLG Trigger: TCCTAGCAGTTGGACAAGCAAATGGTCGAGTTGTAC...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACGTATACCAGAGTGACTaGAGCTGTGGGTCTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHVYQSD*SCGSSL Trigger: CAATGAAGACCCACAGCTCAAGTCACTCTGGTATAC...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACCCCTTCATTCAGGATTaGGATTGCTCGCCGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHPFIQD*DCSPNI Trigger: GATATTCGGCGAGCAATCCAAATCCTGAATGAAGGG...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCGCAGGCCTGTCCTGGTaGGACACCATGCGACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLNSTNIHVLMFLSAALAAGLSW*DTMRPL Trigger: CAAAGGTCGCATGGTGTCCAACCAGGACAGGCCTGC...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACTTCGATTTTGACTCGTaGGATGCCATGCAAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHFDFDS*DAMQRK Trigger: CTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAA...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACGCCATTGCCACCACATaGAGATTCAGATCTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHAIATT*RFRSPF Trigger: AAAAGGAGATCTGAATCTCAATGTGGTGGCAATGGC...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACGGGCAGCTTGTGACTTaGGATTTTGTTGGTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDGQLVT*DFVGEP Trigger: TGGCTCACCAACAAAATCCAAAGTCACAAGCTGCCC...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACTGTCAAGGGCTTTGGTaGTTCAGTCAAAGTCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHCQGLW*FSQSQN Trigger: GTTTTGACTTTGACTGAACAACCAAAGCCCTTGACA...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACCACTTCTTTCAATTATaGTGGGTTCGGTTTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHHFFQL*WVRFHP Trigger: GGGATGAAACCGAACCCACAATAATTGAAAGAAGTG...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACTCAGACATTGTTCGGTaGGGAGTCACAACTATCATT | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHSDIVR*GVTTII Trigger: AATGATAGTTGTGACTCCCAACCGAACAATGTCTGA...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACTCAAATTCTGCCCTTTaGTGCCAAAACCTCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDSNSAL*CQNLQA Trigger: TGCCTGGAGGTTTTGGCACAAAAGGGCAGAATTTGA...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACGTGTATCTGAGTTTATaGACAGCAATGTCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDVYLSL*TAMSLQ Trigger: CTGCAGCGACATTGCTGTCAATAAACTCAGATACAC...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAGCTGTGGGTCTTCATaGCCAGCTAAAATGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDSCGSS*PAKMWF Trigger: AAACCACATTTTAGCTGGCAATGAAGACCCACAGCT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACCATTCAGGATTTGGATaGCTCGCCGAATATCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDHSGFG*LAEYPS Trigger: ACTTGGATATTCGGCGAGCAATCCAAATCCTGAATG...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACTCACGTACAGCAACTTaGTTTTCATACAACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHSRTAT*FSYNTP Trigger: TGGAGTGTTGTATGAAAACAAAGTTGCTGTACGTGA...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACACCTTTTCATCTGATTaGGATCCACCAGGACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDTFSSD*DPPGQL Trigger: TAGCTGTCCTGGTGGATCCAAATCAGATGAAAAGGT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 90 bp | CTCTGCCCTGATGAGGCACAGAGGAACAGCTGTAGGAGATTGATTTaGCACAAAAATTACAACTCACAAACACCTGTGCTAAAGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCPDEAQRNSCRRLI*HKNYNSQTPVLKAW Trigger: CCAAGCCTTTAGCACAGGTGTTTGTGAGTTGTAATTTTTGTGGCAAATCAATCTCCTACAGCTGTTCCTCTGTGCCTCATCAGGGCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | CAGGCCTGTCCTGGTTGGACACCATGCGACCTTTGTCAAGGGCTTTaGTTGTTCAGTCAAAGTCAAAACTGGCTTCTCAAATTTTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QACPGWTPCDLCQGL*LFSQSQNWLLKFSK Trigger: CTTAGAAAATTTGAGAAGCCAGTTTTGACTTTGACTGAACAACCAAAGCCCTTGACAAAGGTCGCATGGTGTCCAACCAGGACAGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACCTTAGAGTTATGATCTaGACCAAGACTTGTAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHLRVMI*TKTCKY Trigger: GTACTTACAAGTCTTGGTCAAGATCATAACTCTAAG...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATTGCAAGGGTATTGCATaGGCGAGCATGCTTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNCKGIA*ASMLWN Trigger: GTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCA...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACACTCATACAGCGGTTTaGTCACTAGTAATGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHTHTAV*SLVMLF Trigger: AAACAACATTACTAGTGACAAAACCGCTGTATGAGT...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACTCCGGAGATCAAATATaGCTAGATTACGATGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDSGDQI*LDYDAC Trigger: GCATGCATCGTAATCTAGCAATATTTGATCTCCGGA...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAACTATCATTCGATTTaGACTCGTTGGATGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDNYHSI*TRWMPC Trigger: GCATGGCATCCAACGAGTCAAAATCGAATGATAGTT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCCCCATGCTGCAGCAAGGTTCTGGAGATGAGTTGAATCACTGCTTCCAACACGAAGGCGCATTTTTGTaGCTATATCTTTTTCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPMLQQGSGDELNHCFQHEGAFL*LYLFLR Trigger: CCTTAGAAAAAGATATAGCAACAAAAATGCGCCTTC...GTGTTGGAAGCAGTGATTCAACTCATCTCCAGAACCTTGCTGCAGCATGGGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATACCTGTGCTAAAGGCTaGGAACTGGGATCCAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNTCAKG*ELGSSL Trigger: TAAGCTGGATCCCAGTTCCAAGCCTTTAGCACAGGT...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS TCA 90 bp | AACACCTGTGCTAAAGGCTTGGAACTGGGATCCAGCTTACTCCTATaGATATCAAATTCTGCCCTTTTGTGCCAAAACCTCCAGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: NTCAKGLELGSSLLL*ISNSALLCQNLQAS Trigger: AGATGCCTGGAGGTTTTGGCACAAAAGGGCAGAATTTGATATTCATAGGAGTAAGCTGGATCCCAGTTCCAAGCCTTTAGCACAGGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | AGCAGCTCTTTCCCATTCTCCTTCTTGCACAAGGGAGTTCAAAAATaGCCCTACATCTACATCCGTTCCTTTCTTTATCCACCCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSFPFSFLHKGVQK*PYIYIRSFLYPPTK Trigger: CTTTGTGGGTGGATAAAGAAAGGAACGGATGTAGATGTAGGGCCATTTTTGAACTCCCTTGTGCAAGAAGGAGAATGGGAAAGAGCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | AGATTCAGATCTCCTTTTTCTGAAGACGCCCCTTCATTCAGGATTTaGATTGCTCGCCGAATATCCAAGTTGAACAAAGCCACAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RFRSPFSEDAPSFRI*IARRISKLNKATAA Trigger: TGCTGCTGTGGCTTTGTTCAACTTGGATATTCGGCGAGCAATCCAAATCCTGAATGAAGGGGCGTCTTCAGAAAAAGGAGATCTGAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CGCATGCTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAACAAATCTATCAACTaGGTGTGGTGCCCACAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RMLNQLTSLLLTWSFEEDNKSIN*VWCPQN Trigger: ATTTTGTGGGCACCACACCAAGTTGATAGATTTGTT...GTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAGCATGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 90 bp | TTCTGGTCTCGTGGAAGCCAACACAGAGATAGAGAAGCGTCATTCTaGCCTAACTCATACAGCGGTTTTGTCACTAGTAATGTTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FWSRGSQHRDREASF*PNSYSGFVTSNVVS Trigger: TGAAACAACATTACTAGTGACAAAACCGCTGTATGAGTTAGGGCAGAATGACGCTTCTCTATCTCTGTGTTGGCTTCCACGAGACCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | TCAAATATTGCTAGATTACGATGCATGCCAGCAAGAAGAAGTTTCTaGTCTCGTGGAAGCCAACACAGAGATAGAGAAGCGTCATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SNIARLRCMPARRSF*SRGSQHRDREASFC Trigger: GCAGAATGACGCTTCTCTATCTCTGTGTTGGCTTCCACGAGACCAGAAACTTCTTCTTGCTGGCATGCATCGTAATCTAGCAATATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | AAGCAATGTAATTGTCACAAGGCTGCACACTTCTTTCAATTATTGTaGGTTCGGTTTCATCCCCGATGGGAGTGGGTGTATGCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: KQCNCHKAAHFFQLL*VRFHPRWEWVYAAY Trigger: ATATGCAGCATACACCCACTCCCATCGGGGATGAAACCGAACCCACAATAATTGAAAGAAGTGTGCAGCCTTGTGACAATTACATTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | CATTGTTCGGTTGGGAGTCACAACTATCATTCGATTTTGACTCGTTaGATGCCATGCAAAGGAAGCAATGTAATTGTCACAAGGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HCSVGSHNYHSILTR*MPCKGSNVIVTRLH Trigger: GTGCAGCCTTGTGACAATTACATTGCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAATGATAGTTGTGACTCCCAACCGAACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS TCA 90 bp | GCAATGTCGCTGCAGAGTCTTCAGATAAACGTAACGATCCAGCTTTaGGTTCTGAATTCACAGCCGATTCCACATGATAAAGGCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: AMSLQSLQINVTIQL*VLNSQPIPHDKGSI Trigger: AATTGAGCCTTTATCATGTGGAATCGGCTGTGAATTCAGAACTCAAAGCTGGATCGTTACGTTTATCTGAAGACTCTGCAGCGACATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 90 bp | CAGCAGCAAGCCAGTTACTATCCAGTGGATTCCATGCAAGGGTATTaGATTGGCGAGCATGCTTTGGAACAAATTCTTTTCCTATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QQQASYYPVDSMQGY*IGEHALEQILFLSN Trigger: ATTTGATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAACTGGCTTGCTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 90 bp | GTTGGGAGTCACAACTATCATTCGATTTTGACTCGTTGGATGCCATaGAAAGGAAGCAATGTAATTGTCACAAGGCTGCACACTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGSHNYHSILTRWMP*KGSNVIVTRLHTSF Trigger: GAAAGAAGTGTGCAGCCTTGTGACAATTACATTGCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAATGATAGTTGTGACTCCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATGTAACATGCAGTAACTaGCTGTTTGAACATCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNVTCSN*LFEHLQ Trigger: CTGGAGATGTTCAAACAGCAAGTTACTGCATGTTAC...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATGCTAACTTTTTGTCCTaGCTCAAGTCCACCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNANFLS*LKSTFS Trigger: TGAAAAGGTGGACTTGAGCAAGGACAAAAAGTTAGC...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | GCAAGCCAGTTACTATCCAGTGGATTCCATGCAAGGGTATTGCATTaGCGAGCATGCTTTGGAACAAATTCTTTTCCTATCAAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASQLLSSGFHARVLH*RACFGTNSFPIKSL Trigger: CAAAGATTTGATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAACTGGCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | TGCGACCTTTGTCAAGGGCTTTGGTTGTTCAGTCAAAGTCAAAACTaGCTTCTCAAATTTTCTAAGATCCCATATTGCAACCTGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CDLCQGLWLFSQSQN*LLKFSKIPYCNLTF Trigger: GAAGGTCAGGTTGCAATATGGGATCTTAGAAAATTTGAGAAGCCAGTTTTGACTTTGACTGAACAACCAAAGCCCTTGACAAAGGTCGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | TACCAGAGTGACTTGAGCTGTGGGTCTTCATTGCCAGCTAAAATGTaGTTTCTCCAAACCTGTTCTGTATCAAGTCCATACCTTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: YQSDLSCGSSLPAKM*FLQTCSVSSPYLDK Trigger: TTTATCAAGGTATGGACTTGATACAGAACAGGTTTGGAGAAACCACATTTTAGCTGGCAATGAAGACCCACAGCTCAAGTCACTCTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATATTGGCGAGCATGCTTaGGAACAAATTCTTTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNIGEHA*EQILFL Trigger: TAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAAT...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCTTGTCACTAGTAATGTaGTTTCAGCTTCACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLNSTNIHVLMFLSAALALSLVM*FQLHLL Trigger: CAGCAGGTGAAGCTGAAACAACATTACTAGTGACAA...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATGTCTACTGTCACTCCTaGAACAGCTTTTGTATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNVYCHS*NSFCIY Trigger: GTAAATACAAAAGCTGTTCAAGGAGTGACAGTAGAC...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATCCCGAAGGCGCATTTTaGTTGCTATATCTTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNPEGAF*LLYLFL Trigger: TAGAAAAAGATATAGCAACAAAAATGCGCCTTCGGG...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCTCACCAGCCTGCTTTTAACTTGGAGTTTTGAGGAAGACAAGAATGTTCTGAATATCAGTTaGTTTATCCAAGCCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LNQLTSLLLTWSFEEDKNVLNIS*FIQATP Trigger: TGGAGTGGCTTGGATAAACAAACTGATATTCAGAAC...ATTCTTGTCTTCCTCAAAACTCCAAGTTAAAAGCAGGCTGGTGAGCTGGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | CTACTAAACAGCACCAATATTCATGTTCTAATGTTCCTATCAGCAGCGTTGGCCTTCCCATTCTCCTTCTaGCACAAGGGAGTTCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLNSTNIHVLMFLSAALAFPFSF*HKGVQK Trigger: TTTTTGAACTCCCTTGTGCAAGAAGGAGAATGGGAA...GGCCAACGCTGCTGATAGGAACATTAGAACATGAATATTGGTGCTGTTTAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS TCA 90 bp | GACCATTTGCTTGTCCAACTGCTAGGAGACATTCAGGATCATAATTaGGATACCACGCAACACATTTCATATAGGGTGTATCTGAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: DHLLVQLLGDIQDHN*DTTQHISYRVYLSL Trigger: TAAACTCAGATACACCCTATATGAAATGTGTTGCGTGGTATCTCAATTATGATCCTGAATGTCTCCTAGCAGTTGGACAAGCAAATGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 90 bp | AGTCAAAGTCAAAACTGGCTTCTCAAATTTTCTAAGATCCCATATTaGAACCTGACCTTCATAGAAGGAAGCAACACGATCGTGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQSQNWLLKFSKIPY*NLTFIEGSNTIVEV Trigger: TACTTCCACGATCGTGTTGCTTCCTTCTATGAAGGTCAGGTTGCAATATGGGATCTTAGAAAATTTGAGAAGCCAGTTTTGACTTTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | CACAAAAATTACAACTCACAAACACCTGTGCTAAAGGCTTGGAACTaGGATCCAGCTTACTCCTATGAATATCAAATTCTGCCCTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HKNYNSQTPVLKAWN*DPAYSYEYQILPFC Trigger: ACAAAAGGGCAGAATTTGATATTCATAGGAGTAAGCTGGATCCCAGTTCCAAGCCTTTAGCACAGGTGTTTGTGAGTTGTAATTTTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCATATCAAGTCCATACCTaGATAAAGCCCGAAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: YQFQIEDAGTRPVFILKPYQVHT*IKPEGA Trigger: TGCGCCTTCGGGCTTTATCAAGGTATGGACTTGATA...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 90 bp | TTACTATCCAGTGGATTCCATGCAAGGGTATTGCATTGGCGAGCATaGTTTGGAACAAATTCTTTTCCTATCAAATCTTTGAACTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSGFHARVLHWRA*FGTNSFPIKSLNLE Trigger: CTCTAAGTTCAAAGATTTGATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 90 bp | CTGAAAGTCTCACTTTTTCCATGGGAACAATATCAGGAGTATATTTaGTGCAGATATCCCATATTAGAACTGAAAAGTCAGCTCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LKVSLFPWEQYQEYI*CRYPILELKSQLCV Trigger: AACACAGAGCTGACTTTTCAGTTCTAATATGGGATATCTGCAGCAAATATACTCCTGATATTGTTCCCATGGAAAAAGTGAGACTTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 90 bp | GTAATGTTGTTTCAGCTTCACCTGCTGAAAGTCTCACTTTTTCCATaGGAACAATATCAGGAGTATATTTGCTGCAGATATCCCATATTA | + |
|
Preference number: 5 (lower is better) Translates to: VMLFQLHLLKVSLFP*EQYQEYICCRYPIL Trigger: TAATATGGGATATCTGCAGCAAATATACTCCTGATATTGTTCCCATGGAAAAAGTGAGACTTTCAGCAGGTGAAGCTGAAACAACATTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAGCAGTAACTTGCTGTTaGAACATCTCCAGTTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: YQFQIEDAGTRPVFILKPAVTCC*NISSSI Trigger: GATAGAACTGGAGATGTTCAAACAGCAAGTTACTGC...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAGCACCAGATTTCCTGTaGTATCCAACTGCATACATT | + |
|
Preference number: 5 (lower is better) Translates to: YQFQIEDAGTRPVFILKPAPDFL*YPTAYI Trigger: AATGTATGCAGTTGGATACAACAGGAAATCTGGTGC...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS-3UTR CAA 90 bp | TATCAATTTCAGATTGAAGATGCAGGCACAAGGCCTGTTTTTATTCTAAAACCAGCCTCTTTCATTTCATaGGTCAGCTTTTCAATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: YQFQIEDAGTRPVFILKPASFIS*VSFSMY Trigger: ATACATTGAAAAGCTGACCAATGAAATGAAAGAGGC...TGGTTTTAGAATAAAAACAGGCCTTGTGCCTGCATCTTCAATCTGAAATTGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS TCA 72 bp | ACAGCCAGGGCAGCTTGTGACTTTGGATTTTGTTGGTaGGCCACTCACACCATACTGACTAAACCCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TARAACDFGFCW*ATHTILTKPSA Trigger: GGCAGAGGGTTTAGTCAGTATGGTGTGAGTGGCTCACCAACAAAATCCAAAGTCACAAGCTGCCCTGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS GCA 72 bp | GCTAGAAACAGGTGTTCCCATATTAATGAGGCAAAGTaGACATCGAGGAAGGGGTTTCCGACAGCCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARNRCSHINEAK*TSRKGFPTARA Trigger: TGCCCTGGCTGTCGGAAACCCCTTCCTCGATGTGCACTTTGCCTCATTAATATGGGAACACCTGTTTCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CAA 72 bp | CAAGCAGGCCTGTCCTGGTTGGACACCATGCGACCTTaGTCAAGGGCTTTGGTTGTTCAGTCAAAGTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: QAGLSWLDTMRP*SRALVVQSKSK Trigger: TTTTGACTTTGACTGAACAACCAAAGCCCTTGACAAAGGTCGCATGGTGTCCAACCAGGACAGGCCTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CCA 72 bp | GCTAGATTACGATGCATGCCAGCAAGAAGAAGTTTCTaGTCTCGTGGAAGCCAACACAGAGATAGAGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ARLRCMPARRSF*SRGSQHRDREA Trigger: CGCTTCTCTATCTCTGTGTTGGCTTCCACGAGACCAGAAACTTCTTCTTGCTGGCATGCATCGTAATCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
||
| CDS CAA 90 bp | AGGAAGCAATGTAATTGTCACAAGGCTGCACACTTCTTTCAATTATaGTGGGTTCGGTTTCATCCCCGATGGGAGTGGGTGTATGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RKQCNCHKAAHFFQL*WVRFHPRWEWVYAA Trigger: TGCAGCATACACCCACTCCCATCGGGGATGAAACCGAACCCACAATAATTGAAAGAAGTGTGCAGCCTTGTGACAATTACATTGCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | CCAAGGAATTTACAAGCGAATGCCACTCTGTCACGTACAGCAACTTaGTTTTCATACAACACTCCATCATATGCCCCCGCTTCACTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRNLQANATLSRTAT*FSYNTPSYAPASLV Trigger: GACGAGTGAAGCGGGGGCATATGATGGAGTGTTGTATGAAAACAAAGTTGCTGTACGTGACAGAGTGGCATTCGCTTGTAAATTCCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS TCA 72 bp | CATTCAGGATTTGGATTGCTCGCCGAATATCCAAGTTaGACAAAGCCACAGCAGCAGCTCTTTCCCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HSGFGLLAEYPS*TKPQQQLFPIL Trigger: GAGAATGGGAAAGAGCTGCTGCTGTGGCTTTGTTCAACTTGGATATTCGGCGAGCAATCCAAATCCTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | TCCTGTTGTATCCAACTGCATACATTTACACGTGCATaGAGATACAGGACACTCTGCATGGTCCCTGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: SCCIQLHTFTRA*RYRTLCMVPEP Trigger: TGGTTCAGGGACCATGCAGAGTGTCCTGTATCTGCATGCACGTGTAAATGTATGCAGTTGGATACAACAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | CCTGGTTGGACACCATGCGACCTTTGTCAAGGGCTTTaGTTGTTCAGTCAAAGTCAAAACTGGCTTCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGWTPCDLCQGL*LFSQSQNWLLK Trigger: TTTGAGAAGCCAGTTTTGACTTTGACTGAACAACCAAAGCCCTTGACAAAGGTCGCATGGTGTCCAACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | TCCTGGTTGGACACCATGCGACCTTTGTCAAGGGCTTaGGTTGTTCAGTCAAAGTCAAAACTGGCTTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SWLDTMRPLSRA*VVQSKSKLASQ Trigger: TTGAGAAGCCAGTTTTGACTTTGACTGAACAACCAAAGCCCTTGACAAAGGTCGCATGGTGTCCAACCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | TGTAATTGTCACAAGGCTGCACACTTCTTTCAATTATaGTGGGTTCGGTTTCATCCCCGATGGGAGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CNCHKAAHFFQL*WVRFHPRWEWV Trigger: CACCCACTCCCATCGGGGATGAAACCGAACCCACAATAATTGAAAGAAGTGTGCAGCCTTGTGACAATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | GCCTGTCCTGGTTGGACACCATGCGACCTTTGTCAAGGGCTTTGGTaGTTCAGTCAAAGTCAAAACTGGCTTCTCAAATTTTCTAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: ACPGWTPCDLCQGLW*FSQSQNWLLKFSKI Trigger: GATCTTAGAAAATTTGAGAAGCCAGTTTTGACTTTGACTGAACAACCAAAGCCCTTGACAAAGGTCGCATGGTGTCCAACCAGGACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | CGTGGAAGCCAACACAGAGATAGAGAAGCGTCATTCTaGCCTAACTCATACAGCGGTTTTGTCACTAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: RGSQHRDREASF*PNSYSGFVTSN Trigger: ATTACTAGTGACAAAACCGCTGTATGAGTTAGGGCAGAATGACGCTTCTCTATCTCTGTGTTGGCTTCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | TGTTCCGGAGATCAAATATTGCTAGATTACGATGCATaGCAGCAAGAAGAAGTTTCTGGTCTCGTGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSGDQILLDYDA*QQEEVSGLVEA Trigger: GGCTTCCACGAGACCAGAAACTTCTTCTTGCTGGCATGCATCGTAATCTAGCAATATTTGATCTCCGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | GTGGGTTCGGTTTCATCCCCGATGGGAGTGGGTGTATaGTGCATATCATACAGCCTAATAATATTACTATCC | + |
|
Preference number: 6 (lower is better) Translates to: VGSVSSPMGVGV*CISYSLIILLS Trigger: GGATAGTAATATTATTAGGCTGTATGATATGCAGCATACACCCACTCCCATCGGGGATGAAACCGAACCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | TACAGCAACTTTGTTTTCATACAACACTCCATCATATaGCCCCGCTTCACTCGTCAGGAACGCAAACATGAC | + |
|
Preference number: 6 (lower is better) Translates to: YSNFVFIQHSII*PRFTRQERKHD Trigger: GTCATGTTTGCGTTCCTGACGAGTGAAGCGGGGGCATATGATGGAGTGTTGTATGAAAACAAAGTTGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | AATTGTCACAAGGCTGCACACTTCTTTCAATTATTGTaGGTTCGGTTTCATCCCCGATGGGAGTGGGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: NCHKAAHFFQLL*VRFHPRWEWVY Trigger: ATACACCCACTCCCATCGGGGATGAAACCGAACCCACAATAATTGAAAGAAGTGTGCAGCCTTGTGACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | TCTCCTTTTTCTGAAGACGCCCCTTCATTCAGGATTTaGATTGCTCGCCGAATATCCAAGTTGAACAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPFSEDAPSFRI*IARRISKLNKA Trigger: GGCTTTGTTCAACTTGGATATTCGGCGAGCAATCCAAATCCTGAATGAAGGGGCGTCTTCAGAAAAAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | GAGAAGCGTCATTCTGCCCTAACTCATACAGCGGTTTaGTCACTAGTAATGTTGTTTCAGCTTCACCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EKRHSALTHTAV*SLVMLFQLHLL Trigger: CAGCAGGTGAAGCTGAAACAACATTACTAGTGACAAAACCGCTGTATGAGTTAGGGCAGAATGACGCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | CCAGCAGCAAGCCAGTTACTATCCAGTGGATTCCATGCAAGGGTATaGCATTGGCGAGCATGCTTTGGAACAAATTCTTTTCCTATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PAASQLLSSGFHARV*HWRACFGTNSFPIK Trigger: TTTGATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAACTGGCTTGCTGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS TCA 72 bp | TTGGGCTCCAGGCAAGAGATATCCTTTCAAATACAGTaGAGTCAGACATTGTTCGGTTGGGAGTCACAACTA | + |
|
Preference number: 6 (lower is better) Translates to: LGSRQEISFQIQ*SQTLFGWESQL Trigger: TAGTTGTGACTCCCAACCGAACAATGTCTGACTTCACTGTATTTGAAAGGATATCTCTTGCCTGGAGCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | GCCAGTTACTATCCAGTGGATTCCATGCAAGGGTATTaGATTGGCGAGCATGCTTTGGAACAAATTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASYYPVDSMQGY*IGEHALEQILF Trigger: GAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAACTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | CTCAATTCTGAGTCACATACAACAAATCTATCAACTTaGTGTGGTGCCCACAAAATATCGGGCTTGGTACCG | + |
|
Preference number: 6 (lower is better) Translates to: LNSESHTTNLST*CGAHKISGLVP Trigger: CGGTACCAAGCCCGATATTTTGTGGGCACCACACCAAGTTGATAGATTTGTTGTATGTGACTCAGAATTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | GACTTGAGCTGTGGGTCTTCATTGCCAGCTAAAATGTaGTTTCTCCAAACCTGTTCTGTATCAAGTCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: DLSCGSSLPAKM*FLQTCSVSSPY Trigger: GTATGGACTTGATACAGAACAGGTTTGGAGAAACCACATTTTAGCTGGCAATGAAGACCCACAGCTCAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | AGAGTATACCAGAGTGACTTGAGCTGTGGGTCTTCATaGCCAGCTAAAATGTGGTTTCTCCAAACCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RVYQSDLSCGSS*PAKMWFLQTCS Trigger: AGAACAGGTTTGGAGAAACCACATTTTAGCTGGCAATGAAGACCCACAGCTCAAGTCACTCTGGTATACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | CGTCATTCTGCCCTAACTCATACAGCGGTTTTGTCACTAGTAATGTaGTTTCAGCTTCACCTGCTGAAAGTCTCACTTTTTCCATGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RHSALTHTAVLSLVM*FQLHLLKVSLFPWE Trigger: TTCCCATGGAAAAAGTGAGACTTTCAGCAGGTGAAGCTGAAACAACATTACTAGTGACAAAACCGCTGTATGAGTTAGGGCAGAATGACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | ACAGAGATAGAGAAGCGTCATTCTGCCCTAACTCATACAGCGGTTTaGTCACTAGTAATGTTGTTTCAGCTTCACCTGCTGAAAGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TEIEKRHSALTHTAV*SLVMLFQLHLLKVS Trigger: TGAGACTTTCAGCAGGTGAAGCTGAAACAACATTACTAGTGACAAAACCGCTGTATGAGTTAGGGCAGAATGACGCTTCTCTATCTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | ACATTGTTCGGTTGGGAGTCACAACTATCATTCGATTTTGACTCGTaGGATGCCATGCAAAGGAAGCAATGTAATTGTCACAAGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TLFGWESQLSFDFDS*DAMQRKQCNCHKAA Trigger: TGCAGCCTTGTGACAATTACATTGCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAATGATAGTTGTGACTCCCAACCGAACAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | CACAACTATCATTCGATTTTGACTCGTTGGATGCCATaGAAAGGAAGCAATGTAATTGTCACAAGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HNYHSILTRWMP*KGSNVIVTRLH Trigger: GTGCAGCCTTGTGACAATTACATTGCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAATGATAGTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | AGCCAGTTACTATCCAGTGGATTCCATGCAAGGGTATaGCATTGGCGAGCATGCTTTGGAACAAATTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SQLLSSGFHARV*HWRACFGTNSF Trigger: AAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAACTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | GGTTGGGAGTCACAACTATCATTCGATTTTGACTCGTaGGATGCCATGCAAAGGAAGCAATGTAATTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GWESQLSFDFDS*DAMQRKQCNCH Trigger: GTGACAATTACATTGCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAATGATAGTTGTGACTCCCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | CATTGTTCGGTTGGGAGTCACAACTATCATTCGATTTaGACTCGTTGGATGCCATGCAAAGGAAGCAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: HCSVGSHNYHSI*TRWMPCKGSNV Trigger: TACATTGCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAATGATAGTTGTGACTCCCAACCGAACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | CACGATCGTGGAAGTAAGGGTCTACTGTCACTCCTTGAACAGCTTTaGTATTTACAAACATCTTCTGGCTTGTGTTCCGGAGATCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: HDRGSKGLLSLLEQL*YLQTSSGLCSGDQI Trigger: TATTTGATCTCCGGAACACAAGCCAGAAGATGTTTGTAAATACAAAAGCTGTTCAAGGAGTGACAGTAGACCCTTACTTCCACGATCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | GAAGTCAGACATTGTTCGGTTGGGAGTCACAACTATCATTCGATTTaGACTCGTTGGATGCCATGCAAAGGAAGCAATGTAATTGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: EVRHCSVGSHNYHSI*TRWMPCKGSNVIVT Trigger: TGTGACAATTACATTGCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAATGATAGTTGTGACTCCCAACCGAACAATGTCTGACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | ATAAAGTGCAGAGTATACCAGAGTGACTTGAGCTGTGGGTCTTCATaGCCAGCTAAAATGTGGTTTCTCCAAACCTGTTCTGTATCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: IKCRVYQSDLSCGSS*PAKMWFLQTCSVSS Trigger: ACTTGATACAGAACAGGTTTGGAGAAACCACATTTTAGCTGGCAATGAAGACCCACAGCTCAAGTCACTCTGGTATACTCTGCACTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS TCA 72 bp | CTGCAGAGTCTTCAGATAAACGTAACGATCCAGCTTTaGGTTCTGAATTCACAGCCGATTCCACATGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQSLQINVTIQL*VLNSQPIPHDK Trigger: TTTATCATGTGGAATCGGCTGTGAATTCAGAACTCAAAGCTGGATCGTTACGTTTATCTGAAGACTCTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | TTACTATCCAGTGGATTCCATGCAAGGGTATTGCATTaGCGAGCATGCTTTGGAACAAATTCTTTTCCTATC | + |
|
Preference number: 6 (lower is better) Translates to: LLSSGFHARVLH*RACFGTNSFPI Trigger: GATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | GTTGGGAGTCACAACTATCATTCGATTTTGACTCGTTaGATGCCATGCAAAGGAAGCAATGTAATTGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: VGSHNYHSILTR*MPCKGSNVIVT Trigger: TGTGACAATTACATTGCTTCCTTTGCATGGCATCCAACGAGTCAAAATCGAATGATAGTTGTGACTCCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | TACAACTCACAAACACCTGTGCTAAAGGCTTGGAACTaGGATCCAGCTTACTCCTATGAATATCAAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YNSQTPVLKAWN*DPAYSYEYQIL Trigger: CAGAATTTGATATTCATAGGAGTAAGCTGGATCCCAGTTCCAAGCCTTTAGCACAGGTGTTTGTGAGTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | GTTACTATCCAGTGGATTCCATGCAAGGGTATTGCATaGGCGAGCATGCTTTGGAACAAATTCTTTTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: VTIQWIPCKGIA*ASMLWNKFFSY Trigger: ATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | CAAACATCTTCTGGCTTGTGTTCCGGAGATCAAATATaGCTAGATTACGATGCATGCCAGCAAGAAGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: QTSSGLCSGDQI*LDYDACQQEEV Trigger: AACTTCTTCTTGCTGGCATGCATCGTAATCTAGCAATATTTGATCTCCGGAACACAAGCCAGAAGATGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | GGTTTCTCCAAACCTGTTCTGTATCAAGTCCATACCTaGATAAAGCCCGAAGGCGCATTTTTGTTGCTATAT | + |
|
Preference number: 6 (lower is better) Translates to: GFSKPVLYQVHT*IKPEGAFLLLY Trigger: ATATAGCAACAAAAATGCGCCTTCGGGCTTTATCAAGGTATGGACTTGATACAGAACAGGTTTGGAGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | GAACATCTAAAGGTGAACCCTGTAACATGCAGTAACTaGCTGTTTGAACATCTCCAGTTCTATCCACATAGC | + |
|
Preference number: 6 (lower is better) Translates to: EHLKVNPVTCSN*LFEHLQFYPHS Trigger: GCTATGTGGATAGAACTGGAGATGTTCAAACAGCAAGTTACTGCATGTTACAGGGTTCACCTTTAGATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | AGCAAGCCAGTTACTATCCAGTGGATTCCATGCAAGGGTATTGCATaGGCGAGCATGCTTTGGAACAAATTCTTTTCCTATCAAATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SKPVTIQWIPCKGIA*ASMLWNKFFSYQIF Trigger: AAAGATTTGATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACTGGATAGTAACTGGCTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | TCTTCTGTATATTGCTTCATAAAGTGCAGAGTATACCAGAGTGACTaGAGCTGTGGGTCTTCATTGCCAGCTAAAATGTGGTTTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSVYCFIKCRVYQSD*SCGSSLPAKMWFLQ Trigger: TTGGAGAAACCACATTTTAGCTGGCAATGAAGACCCACAGCTCAAGTCACTCTGGTATACTCTGCACTTTATGAAGCAATATACAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | TTGTATTTACAAACATCTTCTGGCTTGTGTTCCGGAGATCAAATATaGCTAGATTACGATGCATGCCAGCAAGAAGAAGTTTCTGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LYLQTSSGLCSGDQI*LDYDACQQEEVSGL Trigger: GAGACCAGAAACTTCTTCTTGCTGGCATGCATCGTAATCTAGCAATATTTGATCTCCGGAACACAAGCCAGAAGATGTTTGTAAATACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS TCA 72 bp | ATTCACAGCCGATTCCACATGATAAAGGCTCAATTCTaGGTCACATACAACAAATCTATCAACTTGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IHSRFHMIKAQF*VTYNKSINLVW Trigger: CCACACCAAGTTGATAGATTTGTTGTATGTGACTCAGAATTGAGCCTTTATCATGTGGAATCGGCTGTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS TCA 72 bp | CTTGTCCAACTGCTAGGAGACATTCAGGATCATAATTaGGATACCACGCAACACATTTCATATAGGGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LVQLLGDIQDHN*DTTQHISYRVY Trigger: ATACACCCTATATGAAATGTGTTGCGTGGTATCTCAATTATGATCCTGAATGTCTCCTAGCAGTTGGACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | AGTGGATTCCATGCAAGGGTATTGCATTGGCGAGCATaGTTTGGAACAAATTCTTTTCCTATCAAATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGFHARVLHWRA*FGTNSFPIKSL Trigger: CAAAGATTTGATAGGAAAAGAATTTGTTCCAAAGCATGCTCGCCAATGCAATACCCTTGCATGGAATCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | CAAAACTGGCTTCTCAAATTTTCTAAGATCCCATATTaGAACCTGACCTTCATAGAAGGAAGCAACACGATC | + |
|
Preference number: 6 (lower is better) Translates to: QNWLLKFSKIPY*NLTFIEGSNTI Trigger: GATCGTGTTGCTTCCTTCTATGAAGGTCAGGTTGCAATATGGGATCTTAGAAAATTTGAGAAGCCAGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 90 bp | GCTGAAAGTCTCACTTTTTCCATGGGAACAATATCAGGAGTATATTaGCTGCAGATATCCCATATTAGAACTGAAAAGTCAGCTCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AESLTFSMGTISGVY*LQISHIRTEKSALC Trigger: ACACAGAGCTGACTTTTCAGTTCTAATATGGGATATCTGCAGCAAATATACTCCTGATATTGTTCCCATGGAAAAAGTGAGACTTTCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CCA 72 bp | TGTCAAGGGCTTTGGTTGTTCAGTCAAAGTCAAAACTaGCTTCTCAAATTTTCTAAGATCCCATATTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: CQGLWLFSQSQN*LLKFSKIPYCN Trigger: GTTGCAATATGGGATCTTAGAAAATTTGAGAAGCCAGTTTTGACTTTGACTGAACAACCAAAGCCCTTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS GCA 72 bp | TATCAGTTTGTTTATCCAAGCCACTCCAATTATGTCTaGTGCTTTCTACCATTCCCAAAGATGATTTTACTA | + |
|
Preference number: 6 (lower is better) Translates to: YQFVYPSHSNYV*CFLPFPKMILL Trigger: TAGTAAAATCATCTTTGGGAATGGTAGAAAGCAGCAGACATAATTGGAGTGGCTTGGATAAACAAACTGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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| CDS CAA 72 bp | CTTGAACAGCTTTTGTATTTACAAACATCTTCTGGCTaGTGTTCCGGAGATCAAATATTGCTAGATTACGAT | + |
|
Preference number: 6 (lower is better) Translates to: LEQLLYLQTSSG*CSGDQILLDYD Trigger: ATCGTAATCTAGCAATATTTGATCTCCGGAACACAAGCCAGAAGATGTTTGTAAATACAAAAGCTGTTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040017.8 |
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