Pregenerated sensors for MINPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024896Ensembl transcript IDs: ENSMUST00000025827.10
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATATCATTTGTGTCCTGCAAGAAGGAGAAGAAGGGAACCCAACATaGTCACTCAAGTCCCCATCTCTGCCAATCACTGCCGCTCACCCG | + |
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Preference number: 1 (lower is better) Translates to: DIICVLQEGEEGNPT*SLKSPSLPITAAHP Trigger: CGGGTGAGCGGCAGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGGTTCCCTTCTTCTCCTTCTTGCAGGACACAAATGATATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR CCA 90 bp | CCATCTCTGCCAATCACTGCCGCTCACCCGGCAGCTACCGTGCTTTaGTATCCAACATTTTTGAAGTGTCATTTTCTAATACCGTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: PSLPITAAHPAATVL*YPTFLKCHFLIPFY Trigger: GTAGAACGGTATTAGAAAATGACACTTCAAAAATGTTGGATACCAAAGCACGGTAGCTGCCGGGTGAGCGGCAGTGATTGGCAGAGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR TCA 90 bp | TCACACACTTTCAGTTTTGCTTCAACCTGGTTCTTGATAGCATGTTaGTTTCTTGTCTGGATGGATATTATATCAGACCTCCTTCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SHTFSFASTWFLIAC*FLVWMDIISDLLLV Trigger: GACCAGAAGGAGGTCTGATATAATATCCATCCAGACAAGAAATCAACATGCTATCAAGAACCAGGTTGAAGCAAAACTGAAAGTGTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR-3UTR GCA 90 bp | GGAACACTTCACGGAAGATCCAGCTATGAAAAGGGAAGCCATGATGGAATGAAAGGAAAATCTCAGCTCTaGAAACACTGGGAGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: GTLHGRSSYEKGSHDGMKGKSQL*KHWEGQ Trigger: CTGTCCCTCCCAGTGTTTGCAGAGCTGAGATTTTCC...TTTCATTCCATCATGGCTTCCCTTTTCATAGCTGGATCTTCCGTGAAGTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR CAA 90 bp | ACTGCCGCTCACCCGGCAGCTACCGTGCTTTGGTATCCAACATTTTaGAAGTGTCATTTTCTAATACCGTTCTACGTCAGTATCTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: TAAHPAATVLWYPTF*KCHFLIPFYVSIFL Trigger: TAAGAAGATACTGACGTAGAACGGTATTAGAAAATGACACTTCAAAAATGTTGGATACCAAAGCACGGTAGCTGCCGGGTGAGCGGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR-3UTR CCA 90 bp | CAGTATCTTCTTAGGTCATTAGGAAAATCTCAGCTCTGCAAACACTGGGAGGGACTATGTAGTCTTGGCTaGCCTGGAACTCACTATGTA | + |
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Preference number: 2 (lower is better) Translates to: QYLLRSLGKSQLCKHWEGLCSLG*PGTHYV Trigger: TACATAGTGAGTTCCAGGCCAGCCAAGACTACATAG...TCCCTCCCAGTGTTTGCAGAGCTGAGATTTTCCTAATGACCTAAGAAGATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR-3UTR GCA 90 bp | TCTGGATGGATATTATATCAGACCTCCTTCTGGTCAGGATCCAGTCTACCACACACTGGGAGGGACAGCTaGTTCATTGAATTAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: SGWILYQTSFWSGSSLPHTGRDS*FIELVF Trigger: AAAAACTAATTCAATGAAGCAGCTGTCCCTCCCAGT...GTGTGGTAGACTGGATCCTGACCAGAAGGAGGTCTGATATAATATCCATCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR-3UTR TCA 90 bp | GGATATTATATCAGACCTCCTTCTGGTCAGGATCCAGTCTACCACACTTATGACGGACAGCTGCTTCATTaGATTAGTTTTTGTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: GYYIRPPSGQDPVYHTYDGQLLH*ISFCSA Trigger: TGCAGAACAAAAACTAATTCAATGAAGCAGCTGTCC...GTCATAAGTGTGGTAGACTGGATCCTGACCAGAAGGAGGTCTGATATAATATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR CAA 90 bp | ATCACACACTTTCAGTTTTGCTTCAACCTGGTTCTTGATAGCATGTaGATTTCTTGTCTGGATGGATATTATATCAGACCTCCTTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: ITHFQFCFNLVLDSM*ISCLDGYYIRPPSG Trigger: ACCAGAAGGAGGTCTGATATAATATCCATCCAGACAAGAAATCAACATGCTATCAAGAACCAGGTTGAAGCAAAACTGAAAGTGTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR-3UTR GCA 90 bp | ATAACGTCAACAAAAATATCACACACTTTCAGTTTTGCTTCAACCTGGTTCTTGATATCATTTGTGTCCTaGAAGAAGGAGAAGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ITSTKISHTFSFASTWFLISFVS*KKEKKG Trigger: TCCCTTCTTCTCCTTCTTGCAGGACACAAATGATAT...CAAGAACCAGGTTGAAGCAAAACTGAAAGTGTGTGATATTTTTGTTGACGTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR GCA 72 bp | GCTCCTTCTGCCGCGGCCTCTAGAGTGGCTACCTCCTaGAAACACAACCACCCCTCAGTATGGCACAGCCGA | + |
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Preference number: 3 (lower is better) Translates to: APSAAASRVATS*KHNHPSVWHSR Trigger: TCGGCTGTGCCATACTGAGGGGTGGTTGTGTTTGCAGGAGGTAGCCACTCTAGAGGCCGCGGCAGAAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR-3UTR CAA 90 bp | CCCATCTCTGCCAATCACTGCCGCTCACCCGGCAGCTACCGTGCTTTGGTATCCTTGCTCTATGTAGTCTaGGCTGGCCTGGAACTCACT | + |
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Preference number: 3 (lower is better) Translates to: PISANHCRSPGSYRALVSLLYVV*AGLELT Trigger: AGTGAGTTCCAGGCCAGCCAAGACTACATAGAGCAA...GGATACCAAAGCACGGTAGCTGCCGGGTGAGCGGCAGTGATTGGCAGAGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR GCA 72 bp | AACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTaGCGCTCACCCGGCAGCTACCGTGCTTTGGTATCC | + |
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Preference number: 3 (lower is better) Translates to: NMVTQVPISANH*RSPGSYRALVS Trigger: GGATACCAAAGCACGGTAGCTGCCGGGTGAGCGGCAGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR GCA 72 bp | CAAGCAGGCAAGAGCCAAGGAGCGTCAGCAAGCGTCTaGCAGGCTGGGCCTCCTATTAATTACTGTTCACCC | + |
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Preference number: 3 (lower is better) Translates to: QAGKSQGASASV*QAGPPINYCSP Trigger: GGGTGAACAGTAATTAATAGGAGGCCCAGCCTGGCAGACGCTTGCTGACGCTCCTTGGCTCTTGCCTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR-3UTR CAA 90 bp | CAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTGCCGCTCACCCGGCAGAAAGACCAGGCTTTATaGCTCTATGTAGTCTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: QHGHSSPHLCQSLPLTRQKDQAL*LYVVLA Trigger: AGCCAAGACTACATAGAGCAATAAAGCCTGGTCTTT...CTGCCGGGTGAGCGGCAGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR TCA 72 bp | CAGCTCTGCAAACACTGGGAGGGACAGCTGCTTCATTaGATTAGTTTTTGTTCTGCAGAGAGCTGCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QLCKHWEGQLLH*ISFCSAESCSR Trigger: CCTGGAGCAGCTCTCTGCAGAACAAAAACTAATTCAATGAAGCAGCTGTCCCTCCCAGTGTTTGCAGAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR TCA 72 bp | ATTAATTACTGTTCACCCCCAATAGGTCTGATGAAATaGAGACGATTCTGCAAGACCTACTTGGAGGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: INYCSPPIGLMK*RRFCKTYLEVK Trigger: TTTAACCTCCAAGTAGGTCTTGCAGAATCGTCTTCATTTCATCAGACCTATTGGGGGTGAACAGTAATTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR TCA 72 bp | TTCAGTTTTGCTTCAACCTGGTTCTTGATAGCATGTTaGTTTCTTGTCTGGATGGATATTATATCAGACCTC | + |
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Preference number: 3 (lower is better) Translates to: FSFASTWFLIAC*FLVWMDIISDL Trigger: GAGGTCTGATATAATATCCATCCAGACAAGAAATCAACATGCTATCAAGAACCAGGTTGAAGCAAAACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR TCA 90 bp | CAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTGCCGCTCACCCGGCAGGGGTGCCGTGACGGATaGGGGCGACCAGCTGCACCG | + |
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Preference number: 4 (lower is better) Translates to: QHGHSSPHLCQSLPLTRQGCRDG*GRPAAP Trigger: CGGTGCAGCTGGTCGCCCTCATCCGTCACGGCACCC...CTGCCGGGTGAGCGGCAGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR TCA 90 bp | AGTGGCTACCTCCTGCAAACACAACCACCCCTCAGTATGGCACAGCCGAAGGTCGGTGCTTGGAGCTGGTaGTCAGCCGCAGGCGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: SGYLLQTQPPLSMAQPKVGAWSW*SAAGGR Trigger: ACGACCGCCTGCGGCTGATCACCAGCTCCAAGCACC...GACCTTCGGCTGTGCCATACTGAGGGGTGGTTGTGTTTGCAGGAGGTAGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAAGGGAACCCAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTCGGGACTCGCGGGTCTaGAGCAGCCCCTGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GEEGNPTWSLKSPSLPITRDSRV*SSPCSC Trigger: GCAGCTGCAGGGGCTGCTGCAGACCCGCGAGTCCCG...AGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGGTTCCCTTCTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | CCCAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTGCCGCTCACCCGGCCTGTCCACACAGCGGTaGTTGGAGCTGGTGATCAGC | + |
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Preference number: 4 (lower is better) Translates to: PNMVTQVPISANHCRSPGLSTQR*LELVIS Trigger: GCTGATCACCAGCTCCAAGCACCGCTGTGTGGACAG...GCCGGGTGAGCGGCAGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CCA 90 bp | CCCATCTCTGCCAATCACTGCCGCTCACCCGGCAGCTACCGTGCTTTGGTATCCTCCGCGTGTCCAAACTaGAGGATGACTGGAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PISANHCRSPGSYRALVSSACPN*RMTGEE Trigger: CTCCTCTCCAGTCATCCTCCAGTTTGGACACGCGGA...GGATACCAAAGCACGGTAGCTGCCGGGTGAGCGGCAGTGATTGGCAGAGATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CCA 90 bp | AGTGGCTACCTCCTGCAAACACAACCACCCCTCAGTATGGCACAGCCGAAGGTCGGGAGGTGGCAGTCCTaGGTGGTAATGCTGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: SGYLLQTQPPLSMAQPKVGRWQS*VVMLPQ Trigger: TTGTGGCAGCATTACCACCCAGGACTGCCACCTCCC...GACCTTCGGCTGTGCCATACTGAGGGGTGGTTGTGTTTGCAGGAGGTAGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | TCTGGATGGATATTATATCAGACCTCCTTCTGGTCAGGATCCAGTCTACCACACCCAGCTGCACCGGGGTaGAGGTCCCCGCCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGWILYQTSFWSGSSLPHPAAPG*RSPPAA Trigger: AGCTGCTGGCGGGGACCTGCACCCCGGTGCAGCTGG...GTGTGGTAGACTGGATCCTGACCAGAAGGAGGTCTGATATAATATCCATCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAAGGGAACCCAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTAGCAGCCCCTGCAGCTaGTTCAGCTTGCGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: GEEGNPTWSLKSPSLPITSSPCS*FSLRIC Trigger: GCAGATCCGCAAGCTGAAGCAGCTGCAGGGGCTGCT...AGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGGTTCCCTTCTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | GCAGAGAGCTGCTCCAGGGAGAGTCATGTCTTACCCGTATGTCTAGATCCTAAACCCTTCTCCACCAGCTaGCCGTCCATCCAGTCACCG | + |
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Preference number: 4 (lower is better) Translates to: AESCSRESHVLPVCLDPKPFSTS*PSIQSP Trigger: CGGTGACTGGATGGACGGGCAGCTGGTGGAGAAGGG...TTTAGGATCTAGACATACGGGTAAGACATGACTCTCCCTGGAGCAGCTCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CCA 90 bp | CCCAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTGCCGCTCACCCGGCTCACACCAGGGAGAATaGACACCTTTAATTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PNMVTQVPISANHCRSPGSHQGE*TPLIAR Trigger: CCTGGCAATTAAAGGTGTCCATTCTCCCTGGTGTGA...GCCGGGTGAGCGGCAGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CCA 90 bp | AACCCAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTGCCGCTCACCCGAGCAGCAGCTGTATCTaGAATTGTTCTTCGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NPTWSLKSPSLPITAAHPSSSCI*NCSSGL Trigger: GAGCCCCGAAGAACAATTCCAGATACAGCTGCTGCT...CGGGTGAGCGGCAGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | GGATATTATATCAGACCTCCTTCTGGTCAGGATCCAGTCTACCACACTTATGACGGAGGAAGGCGGCGCTaGTGTCCACACAGCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GYYIRPPSGQDPVYHTYDGGRRR*CPHSGA Trigger: AGCACCGCTGTGTGGACAGCAGCGCCGCCTTCCTCC...GTCATAAGTGTGGTAGACTGGATCCTGACCAGAAGGAGGTCTGATATAATATCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CCA 90 bp | GGATATTATATCAGACCTCCTTCTGGTCAGGATCCAGTCTACCACACTTATGACTGCTGCCACAACCCCTaGAGGAAGGCGGCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GYYIRPPSGQDPVYHTYDCCHNP*RKAALL Trigger: CAGCAGCGCCGCCTTCCTCCAGGGGTTGTGGCAGCA...GTCATAAGTGTGGTAGACTGGATCCTGACCAGAAGGAGGTCTGATATAATATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR TCA 90 bp | CTTCACGGAAGATCCAGCTATGAAAAGGGAAGCCATGATGGAATGAAAAAGACATGCCGAAGTAGGGGCTaGGCACCGAAGCCACCGGGT | + |
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Preference number: 4 (lower is better) Translates to: LHGRSSYEKGSHDGMKKTCRSRG*APKPPG Trigger: ACCCGGTGGCTTCGGTGCTCAGCCCCTACTTCGGCA...TGTCTTTTTCATTCCATCATGGCTTCCCTTTTCATAGCTGGATCTTCCGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR TCA 90 bp | TCTGGATGGATATTATATCAGACCTCCTTCTGGTCAGGATCCAGTCTACCACACGGAGAGGAGACTGGCTaGGACCTTTGCTTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGWILYQTSFWSGSSLPHGEETG*DLCFCS Trigger: GGAGCAGAAGCAAAGGTCTCAGCCAGTCTCCTCTCC...GTGTGGTAGACTGGATCCTGACCAGAAGGAGGTCTGATATAATATCCATCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | CTTCACGGAAGATCCAGCTATGAAAAGGGAAGCCATGATGGAATGAAAAAGACAAGCTGTCGCATGTCCTaGCGCCCCTTCTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: LHGRSSYEKGSHDGMKKTSCRMS*RPFSTS Trigger: GCTGGTGGAGAAGGGGCGGCAGGACATGCGACAGCT...TGTCTTTTTCATTCCATCATGGCTTCCCTTTTCATAGCTGGATCTTCCGTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | CCCAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTGCCGCTCACCCGGCTTCTTTAAGACCTTCTaGATTTCTGGTCCAGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PNMVTQVPISANHCRSPGFFKTF*ISGPVL Trigger: CAAAACTGGACCAGAAATGCAGAAGGTCTTAAAGAA...GCCGGGTGAGCGGCAGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CCA 90 bp | CCCATCTCTGCCAATCACTGCCGCTCACCCGGCAGCTACCGTGCTTTGGTATCCTTTATCATTAATTCTTaGAGGGCCACACTCCATATC | + |
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Preference number: 4 (lower is better) Translates to: PISANHCRSPGSYRALVSFIINS*RATLHI Trigger: GATATGGAGTGTGGCCCTCCAAGAATTAATGATAAA...GGATACCAAAGCACGGTAGCTGCCGGGTGAGCGGCAGTGATTGGCAGAGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CCA 90 bp | GGAGAAGAAGGGAACCCAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTGGCTGCACTCCTTACTaGTTTGGCAGCTCTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GEEGNPTWSLKSPSLPITGCTPY*FGSSEE Trigger: TTCTTCAGAGCTGCCAAACCAGTAAGGAGTGCAGCC...AGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGGTTCCCTTCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR TCA 90 bp | TCTGGATGGATATTATATCAGACCTCCTTCTGGTCAGGATCCAGTCTACCACACGTCCAAACTGGAGGATaGCTGGAGAGGAGACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SGWILYQTSFWSGSSLPHVQTGG*LERRLA Trigger: AGCCAGTCTCCTCTCCAGTCATCCTCCAGTTTGGAC...GTGTGGTAGACTGGATCCTGACCAGAAGGAGGTCTGATATAATATCCATCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | ACGTCAACAAAAATATCACACACTTTCAGTTTTGCTTCAACCTGGTTCTTGATAATGAGGGCGACCAGCTaGACCGGGGTGCAGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TSTKISHTFSFASTWFLIMRATS*TGVQVP Trigger: GGGGACCTGCACCCCGGTGCAGCTGGTCGCCCTCAT...TATCAAGAACCAGGTTGAAGCAAAACTGAAAGTGTGTGATATTTTTGTTGACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR TCA 90 bp | ATAACGTCAACAAAAATATCACACACTTTCAGTTTTGCTTCAACCTGGTTCTTGCGTAGTTCTCCCGGCTaGAGAGGTCTGGGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ITSTKISHTFSFASTWFLRSSPG*RGLGRG Trigger: CCCTCTTCCCAGACCTCTTCAGCCGGGAGAACTACG...CAAGAACCAGGTTGAAGCAAAACTGAAAGTGTGTGATATTTTTGTTGACGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR TCA 90 bp | GGAGAAGAAGGGAACCCAACATGGTCACTCAAGTCCCCATCTCTGCCAATCACTGGTCAAATGAACAGGTaGAAAAAGCTACCTGAATTA | + |
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Preference number: 4 (lower is better) Translates to: GEEGNPTWSLKSPSLPITGQMNR*KKLPEL Trigger: TAATTCAGGTAGCTTTTTTCACCTGTTCATTTGACC...AGTGATTGGCAGAGATGGGGACTTGAGTGACCATGTTGGGTTCCCTTCTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | CAGTATCTTCTTAGGTCATTAGGAAAATCTCAGCTCTGCAAACACTGGGAGGGACTGTTCATTGGCACTTaGAGAGTAGCTGCAACTTTC | + |
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Preference number: 4 (lower is better) Translates to: QYLLRSLGKSQLCKHWEGLFIGT*RVAATF Trigger: GAAAGTTGCAGCTACTCTGCAAGTGCCAATGAACAG...TCCCTCCCAGTGTTTGCAGAGCTGAGATTTTCCTAATGACCTAAGAAGATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| 3UTR CAA 72 bp | ATCCAGTCTACCACACTTATGACTAAGCGATATCATTaGTGTCCTGCAAGAAGGAGAAGAAGGGAACCCAAC | + |
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Preference number: 4 (lower is better) Translates to: IQSTTLMTKRYH*CPARRRRREPN Trigger: GTTGGGTTCCCTTCTTCTCCTTCTTGCAGGACACAAATGATATCGCTTAGTCATAAGTGTGGTAGACTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR TCA 90 bp | CTTCACGGAAGATCCAGCTATGAAAAGGGAAGCCATGATGGAATGAAAAAGACATTTCTGGTCCAGTTTTaGAAGCTTCCACATGATAAA | + |
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Preference number: 4 (lower is better) Translates to: LHGRSSYEKGSHDGMKKTFLVQF*KLPHDK Trigger: TTTATCATGTGGAAGCTTTCAAAACTGGACCAGAAA...TGTCTTTTTCATTCCATCATGGCTTCCCTTTTCATAGCTGGATCTTCCGTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR GCA 90 bp | AACGTCAACAAAAATATCACACACTTTCAGTTTTGCTTCAACCTGGTTCTTGATGTATTCCAGAACCCTTaGATCATCTACGTCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: NVNKNITHFQFCFNLVLDVFQNP*IIYVKH Trigger: GTGTTTGACGTAGATGATGCAAGGGTTCTGGAATAC...ATCAAGAACCAGGTTGAAGCAAAACTGAAAGTGTGTGATATTTTTGTTGACGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS GCA 90 bp | CGCAGGGCCAGCTGTCGCATGTCCTGCCGCCCCTTCTCCACCAGCTaGCCGTCCATCCAGTCACCGTACCACAGCGGCCACTCGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RRASCRMSCRPFSTS*PSIQSPYHSGHSAS Trigger: GCTGGCCGAGTGGCCGCTGTGGTACGGTGACTGGATGGACGGGCAGCTGGTGGAGAAGGGGCGGCAGGACATGCGACAGCTGGCCCTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CAA 90 bp | AGTGGCTACCTCCTGCAAACACAACCACCCCTCAGTATGGCACAGCCGAAGGTCTGCAGCTGCTTCAGCTaGCGGATCTGCTTGGTCGTA | + |
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Preference number: 5 (lower is better) Translates to: SGYLLQTQPPLSMAQPKVCSCFS*RICLVV Trigger: TACGACCAAGCAGATCCGCAAGCTGAAGCAGCTGCA...GACCTTCGGCTGTGCCATACTGAGGGGTGGTTGTGTTTGCAGGAGGTAGCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CAA 90 bp | AGTGGCTACCTCCTGCAAACACAACCACCCCTCAGTATGGCACAGCCGAAGGTCGCACGAAGATTAGGTTaGAGGCATAAGGTACGATGT | + |
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Preference number: 5 (lower is better) Translates to: SGYLLQTQPPLSMAQPKVARRLG*RHKVRC Trigger: ACATCGTACCTTATGCCTCAAACCTAATCTTCGTGC...GACCTTCGGCTGTGCCATACTGAGGGGTGGTTGTGTTTGCAGGAGGTAGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS-3UTR CAA 90 bp | GCAGAGAGCTGCTCCAGGGAGAGTCATGTCTTACCCGTATGTCTAGATCCTAAAGCACTCCTTACTGGTTaGGCAGCTCTGAAGAATGTC | + |
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Preference number: 5 (lower is better) Translates to: AESCSRESHVLPVCLDPKALLTG*AALKNV Trigger: GACATTCTTCAGAGCTGCCAAACCAGTAAGGAGTGC...TTTAGGATCTAGACATACGGGTAAGACATGACTCTCCCTGGAGCAGCTCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS TCA 90 bp | AGAGCCGTCTCGTTTCTTTCCACATCAGTTAAGAACTTCTCACAATaGTCGAAGAACCTCATTAGTTTATCATTAATTCTTGGAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RAVSFLSTSVKNFSQ*SKNLISLSLILGGP Trigger: TGGCCCTCCAAGAATTAATGATAAACTAATGAGGTTCTTCGATCATTGTGAGAAGTTCTTAACTGATGTGGAAAGAAACGAGACGGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS TCA 72 bp | CATCTTCGTAGCGTGTCTTCGTGCCGAAGTAGGGGCTaGGCACCGAAGCCACCGGGTCGCCGCGCCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: HLRSVSSCRSRG*APKPPGRRAPG Trigger: TCCCGGGGCGCGGCGACCCGGTGGCTTCGGTGCTCAGCCCCTACTTCGGCACGAAGACACGCTACGAAGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CCA 72 bp | CCGCAGGCGGTCGTAGTTCTCCCGGCTGAAGAGGTCTaGGAAGAGGGCAGCCAGACGCAGGGCCAGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: PQAVVVLPAEEV*EEGSQTQGQLS Trigger: CGACAGCTGGCCCTGCGTCTGGCTGCCCTCTTCCCAGACCTCTTCAGCCGGGAGAACTACGACCGCCTGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS GCA 72 bp | AGCTGTCGCATGTCCTGCCGCCCCTTCTCCACCAGCTaGCCGTCCATCCAGTCACCGTACCACAGCGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SCRMSCRPFSTS*PSIQSPYHSGH Trigger: GTGGCCGCTGTGGTACGGTGACTGGATGGACGGGCAGCTGGTGGAGAAGGGGCGGCAGGACATGCGACAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS TCA 72 bp | TTGAGCTCCTCATACAACCCGACGGGTCTCTGCGAGTaGGCCAGGGGCAGCACCTTCTCATTCAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSSSYNPTGLCE*ARGSTFSFSSS Trigger: GCTGCTGCTGAATGAGAAGGTGCTGCCCCTGGCTCACTCGCAGAGACCCGTCGGGTTGTATGAGGAGCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CAA 72 bp | GATGTTCGCTTTGGGCGGGCTGCACTCCTTACTGGTTaGGCAGCTCTGAAGAATGTCCCGGTAGTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: DVRFGRAALLTG*AALKNVPVVGL Trigger: AAGACCCACTACCGGGACATTCTTCAGAGCTGCCAAACCAGTAAGGAGTGCAGCCCGCCCAAAGCGAACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CAA 90 bp | AGCCAGGGGCAGCACCTTCTCATTCAGCAGCAGCTGTATCTGGAATaGTTCTTCGGGGCTCTGCGCGTTGTCACAGTGGTAAAGCACGAA | + |
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Preference number: 6 (lower is better) Translates to: SQGQHLLIQQQLYLE*FFGALRVVTVVKHE Trigger: TTCGTGCTTTACCACTGTGACAACGCGCAGAGCCCCGAAGAACAATTCCAGATACAGCTGCTGCTGAATGAGAAGGTGCTGCCCCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CAA 72 bp | CAGCACCTTCTCATTCAGCAGCAGCTGTATCTGGAATaGTTCTTCGGGGCTCTGCGCGTTGTCACAGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: QHLLIQQQLYLE*FFGALRVVTVV Trigger: TACCACTGTGACAACGCGCAGAGCCCCGAAGAACAATTCCAGATACAGCTGCTGCTGAATGAGAAGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS TCA 72 bp | TTTATCATTAATTCTTGGAGGGCCACACTCCATATCTaGGACGTCGGGAGGTGGCAGTCCTGGGTGGTAATG | + |
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Preference number: 6 (lower is better) Translates to: FIINSWRATLHI*DVGRWQSWVVM Trigger: CATTACCACCCAGGACTGCCACCTCCCGACGTCTCAGATATGGAGTGTGGCCCTCCAAGAATTAATGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS TCA 72 bp | TGCTCCACTGCTTTGTCCAGGTGTAGAAAAATGTCCTaGAATAGGTTGCAGCTGGACCGGCTGTTAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: CSTALSRCRKMS*NRLQLDRLLMV Trigger: CACCATTAACAGCCGGTCCAGCTGCAACCTATTTCAGGACATTTTTCTACACCTGGACAAAGCAGTGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CAA 72 bp | AGGTACGATGTGACCACTTCGGAACTTGCGATTAACTaGCTCCTCGAAATTGTAAGCGGTCAGAGGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RYDVTTSELAIN*LLEIVSGQRLL Trigger: AAGGAGCCTCTGACCGCTTACAATTTCGAGGAGCAAGTTAATCGCAAGTTCCGAAGTGGTCACATCGTACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CAA 72 bp | GCGCGTTGTCACAGTGGTAAAGCACGAAGATTAGGTTaGAGGCATAAGGTACGATGTGACCACTTCGGAACT | + |
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Preference number: 6 (lower is better) Translates to: ARCHSGKARRLG*RHKVRCDHFGT Trigger: AGTTCCGAAGTGGTCACATCGTACCTTATGCCTCAAACCTAATCTTCGTGCTTTACCACTGTGACAACGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CCA 72 bp | GCATCATCTACGTCAAACACATCACACCAGGGAGAATaGACACCTTTAATTGCCAGGTCAAATGAACAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ASSTSNTSHQGE*TPLIARSNEQV Trigger: CACCTGTTCATTTGACCTGGCAATTAAAGGTGTCCATTCTCCCTGGTGTGATGTGTTTGACGTAGATGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CAA 90 bp | TTCGTTTCCAGTACTGTTTCAGGTCGTTTAAGTATTCCAGAACCCTaGCATCATCTACGTCAAACACATCACACCAGGGAGAATGGACAC | + |
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Preference number: 6 (lower is better) Translates to: FVSSTVSGRLSIPEP*HHLRQTHHTRENGH Trigger: GTGTCCATTCTCCCTGGTGTGATGTGTTTGACGTAGATGATGCAAGGGTTCTGGAATACTTAAACGACCTGAAACAGTACTGGAAACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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| CDS CAA 72 bp | AGTACTGTTTCAGGTCGTTTAAGTATTCCAGAACCCTaGCATCATCTACGTCAAACACATCACACCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: STVSGRLSIPEP*HHLRQTHHTRE Trigger: CTCCCTGGTGTGATGTGTTTGACGTAGATGATGCAAGGGTTCTGGAATACTTAAACGACCTGAAACAGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025827.10 |
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