Pregenerated sensors for MINDY3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026767Ensembl transcript IDs: ENSMUST00000028105.13, ENSMUST00000124515.2, ENSMUST00000124603.8, ENSMUST00000129489.8, ENSMUST00000129993.3, ENSMUST00000135397.8, ENSMUST00000144645.8, ENSMUST00000151529.8, ENSMUST00000154899.7, ENSMUST00000155530.8
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TTCGACAGCCAAGGCAGAAGAATGTTCCACTTGGCAACTAGACTGTaGAGGACTCCCAGAAATCCTAGCCGCTTCCTCGGGGGTCCTTCC | + |
Preference number: 1 (lower is better) Translates to: FDSQGRRMFHLATRL*RTPRNPSRFLGGPS Trigger: GGAAGGACCCCCGAGGAAGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTGGCTGTCGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129489.8 |
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3UTR GCA 90 bp | CAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCATGGGG | + |
Preference number: 1 (lower is better) Translates to: QRSVVHSNSMYGHLV*RQRLIGVSSVCSMG Trigger: CCCCATGCTACAGACAGACGACACTCCTATTAAACGCTGTCTGCAAACCAAATGGCCATACATTGAGTTACTGTGGACCACAGACCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR GCA 90 bp | ACTGCATGCCCCGTCAGTAGGAGGTTAATTAAGCTTTGGCTGCCATaGCCGTACACAGGGTCTATCAAAGGCTCATTTGCATCTTCAATT | + |
Preference number: 1 (lower is better) Translates to: TACPVSRRLIKLWLP*PYTGSIKGSFASSI Trigger: AATTGAAGATGCAAATGAGCCTTTGATAGACCCTGTGTACGGGCATGGCAGCCAAAGCTTAATTAACCTCCTACTGACGGGGCATGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR CCA 90 bp | AACCACTGCAGTCCCTTCCACATACATTACTATATACAGGCAGCGTaGCCAAGAAGACCAAGGACAGGATTGGGAATCAGGAACTCAGTT | + |
Preference number: 1 (lower is better) Translates to: NHCSPFHIHYYIQAA*PRRPRTGLGIRNSV Trigger: AACTGAGTTCCTGATTCCCAATCCTGTCCTTGGTCTTCTTGGCCACGCTGCCTGTATATAGTAATGTATGTGGAAGGGACTGCAGTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
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3UTR CCA 90 bp | ACATTAGATACTGCATGCCCCGTCAGTAGGAGGTTAATTAAGCTTTaGCTGCCATGCCCGTACACAGGGTCTATCAAAGGCTCATTTGCA | + |
Preference number: 1 (lower is better) Translates to: TLDTACPVSRRLIKL*LPCPYTGSIKGSFA Trigger: TGCAAATGAGCCTTTGATAGACCCTGTGTACGGGCATGGCAGCCAAAGCTTAATTAACCTCCTACTGACGGGGCATGCAGTATCTAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | GCAACTAGACTGTGCAGGACTCCCAGAAATCCTAGCCGCTTCCTCGGGGGTCCTAAACGCCTGGACAGGTaGAATAACAGCACAGGGGCC | + |
Preference number: 2 (lower is better) Translates to: ATRLCRTPRNPSRFLGGPKRLDR*NNSTGA Trigger: GGCCCCTGTGCTGTTATTGCACCTGTCCAGGCGTTT...AGGACCCCCGAGGAAGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151529.8 |
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3UTR-3UTR TCA 90 bp | GAATGTTCCACTTGGCAACTAGACTGTGCAGGACTCCCAGAAATCCTAGCCGCTCTTCTGCTCTTCCTCTaGGCAATCCCGCCAGGACGA | + |
Preference number: 2 (lower is better) Translates to: ECSTWQLDCAGLPEILAALLLFL*AIPPGR Trigger: TCGTCCTGGCGGGATTGCTCAGAGGAAGAGCAGAAG...AGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151529.8 |
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3UTR-3UTR GCA 90 bp | ACTTGGCAACTAGACTGTGCAGGACTCCCAGAAATCCTAGCCGCTTCCTCGGGGTTGGCAACTAGACTGTaGAGGACTCCCAGAAATCCT | + |
Preference number: 2 (lower is better) Translates to: TWQLDCAGLPEILAASSGLATRL*RTPRNP Trigger: AGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAA...CCCCGAGGAAGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129489.8 ENSMUST00000151529.8 |
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3UTR-3UTR TCA 90 bp | CAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCCATGAGAAGTTGCATTCCTaGGCACTCTCTATCACCATC | + |
Preference number: 2 (lower is better) Translates to: QLSEGQRSVVHSNSMYGHEKLHS*ALSITI Trigger: GATGGTGATAGAGAGTGCTCAGGAATGCAACTTCTC...ATGGCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | ACTCAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCAAGGACAGCGGTCTGTaGTCCACAGTAACTCAATGT | + |
Preference number: 2 (lower is better) Translates to: TQLSEGQRSVVHSNSMYGKDSGL*STVTQC Trigger: ACATTGAGTTACTGTGGACCACAGACCGCTGTCCTT...GCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR CAA 90 bp | GAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCCATTaGGTTTGCAGACAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGC | + |
Preference number: 2 (lower is better) Translates to: EGQRSVVHSNSMYGH*VCRQRLIGVSSVCS Trigger: GCTACAGACAGACGACACTCCTATTAAACGCTGTCTGCAAACCAAATGGCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | AAACTCTTCTGGCTTGTTCCGAAGGCGCTTCAGGGGCAACTAAAGCCATATCCTTTGGCAACTAGACTGTaGAGGACTCCCAGAAATCCT | + |
Preference number: 2 (lower is better) Translates to: KLFWLVPKALQGQLKPYPLATRL*RTPRNP Trigger: AGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAA...AGGATATGGCTTTAGTTGCCCCTGAAGCGCCTTCGGAACAAGCCAGAAGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129489.8 |
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3UTR-3UTR CCA 90 bp | ACTCTTCTGGCTTGTTCCGAAGGCGCTTCAGGGGCAACTAAAGCCATATCCTTGCCCCCTTTCAACACCTaGTTTGACAATCTTCCTTAC | + |
Preference number: 2 (lower is better) Translates to: TLLACSEGASGATKAISLPPFNT*FDNLPY Trigger: GTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGG...CAAGGATATGGCTTTAGTTGCCCCTGAAGCGCCTTCGGAACAAGCCAGAAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | ACTCTTCTGGCTTGTTCCGAAGGCGCTTCAGGGGCAACTAAAGCCATATCCTTGAGGTTAATTAAGCTTTaGCTGCCATGCCCGTACACA | + |
Preference number: 2 (lower is better) Translates to: TLLACSEGASGATKAISLRLIKL*LPCPYT Trigger: TGTGTACGGGCATGGCAGCCAAAGCTTAATTAACCT...CAAGGATATGGCTTTAGTTGCCCCTGAAGCGCCTTCGGAACAAGCCAGAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR CAA 90 bp | CATTACTATATACAGGCAGCGTGGCCAAGAAGACCAAGGACAGGATaGGGAATCAGGAACTCAGTTCCAATCCCTGCTCTGTCAATGACT | + |
Preference number: 2 (lower is better) Translates to: HYYIQAAWPRRPRTG*GIRNSVPIPALSMT Trigger: AGTCATTGACAGAGCAGGGATTGGAACTGAGTTCCTGATTCCCAATCCTGTCCTTGGTCTTCTTGGCCACGCTGCCTGTATATAGTAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
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3UTR-3UTR TCA 90 bp | CATTTGGTTTGCAGACAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGGGTCCAAGGCTTTCATaGCATCTTCTAGAAGGGAGT | + |
Preference number: 2 (lower is better) Translates to: HLVCRQRLIGVSSVCSMGGPRLS*HLLEGS Trigger: ACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACC...CCCCATGCTACAGACAGACGACACTCCTATTAAACGCTGTCTGCAAACCAAATG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | CATTTGGTTTGCAGACAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGAAGGACAGCGGTCTGTaGTCCACAGTAACTCAATGT | + |
Preference number: 2 (lower is better) Translates to: HLVCRQRLIGVSSVCSMGKDSGL*STVTQC Trigger: ACATTGAGTTACTGTGGACCACAGACCGCTGTCCTT...CCCCATGCTACAGACAGACGACACTCCTATTAAACGCTGTCTGCAAACCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | TTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGTCTTCAAAACCCATAACCACTGCTCTGTCAATGACTTaGTGTGTGACTCTGGGTGAG | + |
Preference number: 2 (lower is better) Translates to: LIGVSSVCSMGSSKPITTALSMT*CVTLGE Trigger: CTCACCCAGAGTCACACAGCAAGTCATTGACAGAGC...AGTGGTTATGGGTTTTGAAGACCCCATGCTACAGACAGACGACACTCCTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
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3UTR-3UTR GCA 90 bp | CAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCCATTATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGA | + |
Preference number: 2 (lower is better) Translates to: QLSEGQRSVVHSNSMYGHYGHLV*RQRLIG Trigger: TCCTATTAAACGCTGTCTGCAAACCAAATGGCCATA...ATGGCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | CATTTGGTTTGCAGACAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGCCCCCTTTCAACACCTaGTTTGACAATCTTCCTTAC | + |
Preference number: 2 (lower is better) Translates to: HLVCRQRLIGVSSVCSMGPPFNT*FDNLPY Trigger: GTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGG...CCCCATGCTACAGACAGACGACACTCCTATTAAACGCTGTCTGCAAACCAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | GGGTCCTTCCTCTCAACCATGAAACCAAGCAGTATGATCCAGAGCTGTCATAAGGAAGAATGTTCCACTTaGCAACTAGACTGTGCAGGA | + |
Preference number: 2 (lower is better) Translates to: GSFLSTMKPSSMIQSCHKEECST*QLDCAG Trigger: TCCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTC...CTTATGACAGCTCTGGATCATACTGCTTGGTTTCATGGTTGAGAGGAAGGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129489.8 ENSMUST00000151529.8 |
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3UTR CAA 90 bp | ACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTaGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTAT | + |
Preference number: 2 (lower is better) Translates to: TPGLTIFLTNTQATQ*SEGQRSVVHSNSMY Trigger: ATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | TATGGCCATTTGGTTTGCAGACAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCTTATGTAGCCAGTCATaGATCCCCCTTTCAACACCT | + |
Preference number: 2 (lower is better) Translates to: YGHLVCRQRLIGVSSVCSLCSQS*IPLSTP Trigger: AGGTGTTGAAAGGGGGATTCATGACTGGCTACATAA...GCTACAGACAGACGACACTCCTATTAAACGCTGTCTGCAAACCAAATGGCCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | CAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGTCTTCAAAACCCATATTATGTAGCCAGTCATaGATCCCCCTTTCAACACCT | + |
Preference number: 2 (lower is better) Translates to: QRLIGVSSVCSMGSSKPILCSQS*IPLSTP Trigger: AGGTGTTGAAAGGGGGATTCATGACTGGCTACATAA...TATGGGTTTTGAAGACCCCATGCTACAGACAGACGACACTCCTATTAAACGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | CAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCCATCCAGGCAGGTTTTTGTaGCTGATTCCATTTATAAAA | + |
Preference number: 2 (lower is better) Translates to: QLSEGQRSVVHSNSMYGHPGRFL*LIPFIK Trigger: TTTTATAAATGGAATCAGTCACAAAAACCTGCCTGG...ATGGCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | ACTCTTCTGGCTTGTTCCGAAGGCGCTTCAGGGGCAACTAAAGCCATATCCTTGCCAGGCAGGTTTTTGTaGCTGATTCCATTTATAAAA | + |
Preference number: 2 (lower is better) Translates to: TLLACSEGASGATKAISLPGRFL*LIPFIK Trigger: TTTTATAAATGGAATCAGTCACAAAAACCTGCCTGG...CAAGGATATGGCTTTAGTTGCCCCTGAAGCGCCTTCGGAACAAGCCAGAAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | CAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCCATAAAACCACATTCCTGTaGACCTGTGAACAAATAGAA | + |
Preference number: 2 (lower is better) Translates to: QLSEGQRSVVHSNSMYGHKTTFL*TCEQIE Trigger: TTCTATTTGTTCACAGGTGCACAGGAATGTGGTTTT...ATGGCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | ACTCAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCAAAACCACATTCCTGTaGACCTGTGAACAAATAGAA | + |
Preference number: 2 (lower is better) Translates to: TQLSEGQRSVVHSNSMYGKTTFL*TCEQIE Trigger: TTCTATTTGTTCACAGGTGCACAGGAATGTGGTTTT...GCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | ACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTTGAGCGAAGGCTCAGTTCCAATCCCTaGTCTGTCAATGACTTGCTG | + |
Preference number: 2 (lower is better) Translates to: TWFDNLPYKYSGNSVERRLSSNP*SVNDLL Trigger: CAGCAAGTCATTGACAGAGCAGGGATTGGAACTGAG...CCTTCGCTCAACTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
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3UTR-3UTR CCA 90 bp | TCGGGATCTGAAACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGGAGTCACCCCCTTTCAACACCTaGTTTGACAATCTTCCTTAC | + |
Preference number: 2 (lower is better) Translates to: SGSETRSKAFMTSSRRESPPFNT*FDNLPY Trigger: GTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGG...TGACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGTTTCAGATCCCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | CCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTTGAGCGAAGGATATATACAGGCAGCGTaGCCAAGAAGACCAAGGACA | + |
Preference number: 2 (lower is better) Translates to: PGLTIFLTNTQATQLSEGYIQAA*PRRPRT Trigger: TGTCCTTGGTCTTCTTGGCCACGCTGCCTGTATATA...TCCTTCGCTCAACTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
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3UTR-3UTR TCA 90 bp | ATGGGGTCTTCAAAACCCATAACCACTGCAGTCCCTTCCACATACATTACCTTTTTTGTTTCCCCACATTaGATACTGGTCCAAGACAGC | + |
Preference number: 2 (lower is better) Translates to: MGSSKPITTAVPSTYITFFVSPH*ILVQDS Trigger: GCTGTCTTGGACCAGTATTCAATGTGGGGAAACAAA...AAAGGTAATGTATGTGGAAGGGACTGCAGTGGTTATGGGTTTTGAAGACCCCAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000129489.8 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | ATGAATCCCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCGGTCCAAGGCTTTCATaGCATCTTCTAGAAGGGAGT | + |
Preference number: 2 (lower is better) Translates to: MNPPFNTWFDNLPYKYSGGPRLS*HLLEGS Trigger: ACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACC...GCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGGATTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | CCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGACAAGAAAGCTGGCTTaGAGGAGAGTGTACTTAGCA | + |
Preference number: 2 (lower is better) Translates to: PLSTPGLTIFLTNTQATQTRKLA*RRVYLA Trigger: TGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGT...CTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | TTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGTCTTCAAAACCCATAACCACTCCCCCTTTCAACACCTaGTTTGACAATCTTCCTTAC | + |
Preference number: 2 (lower is better) Translates to: LIGVSSVCSMGSSKPITTPPFNT*FDNLPY Trigger: GTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGG...AGTGGTTATGGGTTTTGAAGACCCCATGCTACAGACAGACGACACTCCTATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | ACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGGAGTCAGCTATGAATCCAAGGTTAATTAAGCTTTaGCTGCCATGCCCGTACACA | + |
Preference number: 2 (lower is better) Translates to: TRSKAFMTSSRRESAMNPRLIKL*LPCPYT Trigger: TGTGTACGGGCATGGCAGCCAAAGCTTAATTAACCT...TGGATTCATAGCTGACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | CCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTTTGGAAAACTCTTCTaGCTTGTTCCGAAGGCGCTT | + |
Preference number: 2 (lower is better) Translates to: PLSTPGLTIFLTNTQATQFGKLF*LVPKAL Trigger: AAGCGCCTTCGGAACAAGCCAGAAGAGTTTTCCAAA...CTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | ATGAATCCCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCTTATGTAGCCAGTCATaGATCCCCCTTTCAACACCT | + |
Preference number: 2 (lower is better) Translates to: MNPPFNTWFDNLPYKYSGLCSQS*IPLSTP Trigger: AGGTGTTGAAAGGGGGATTCATGACTGGCTACATAA...GCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGGATTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | AAAGCAAACAGATTCTTCCCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGTTATGTAGCCAGTCATaGATCCCCCTTTCAACACCT | + |
Preference number: 2 (lower is better) Translates to: KANRFFPYRCKNHIPVHLLCSQS*IPLSTP Trigger: AGGTGTTGAAAGGGGGATTCATGACTGGCTACATAA...CAGGTGCACAGGAATGTGGTTTTTACAACGATAGGGGAAGAATCTGTTTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | ATATACTCGGGATCTGAAACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGTTATGTAGCCAGTCATaGATCCCCCTTTCAACACCT | + |
Preference number: 2 (lower is better) Translates to: IYSGSETRSKAFMTSSRRLCSQS*IPLSTP Trigger: AGGTGTTGAAAGGGGGATTCATGACTGGCTACATAA...CCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGTTTCAGATCCCGAGTATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | CAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCATTCCTGTGCACCTGTaGACAAATAGAAGTTCCCAC | + |
Preference number: 2 (lower is better) Translates to: QESVLSNTVKVRIVSPQSIPVHL*TNRSSH Trigger: GTGGGAACTTCTATTTGTTCACAGGTGCACAGGAAT...GCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR TCA 90 bp | ATATACTCGGGATCTGAAACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGATTCCTGTGCACCTGTaGACAAATAGAAGTTCCCAC | + |
Preference number: 2 (lower is better) Translates to: IYSGSETRSKAFMTSSRRIPVHL*TNRSSH Trigger: GTGGGAACTTCTATTTGTTCACAGGTGCACAGGAAT...CCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGTTTCAGATCCCGAGTATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR GCA 90 bp | CCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGAAAACCCATAACCACTaGAGTCCCTTCCACATACAT | + |
Preference number: 2 (lower is better) Translates to: PLSTPGLTIFLTNTQATQKTHNH*SPFHIH Trigger: ATGTATGTGGAAGGGACTGCAGTGGTTATGGGTTTT...CTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CCA 90 bp | CTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTTGGACCAAGGACAGGATTaGGAATCAGGAACTCAGTTC | + |
Preference number: 2 (lower is better) Translates to: LSTPGLTIFLTNTQATQLDQGQD*ESGTQF Trigger: GAACTGAGTTCCTGATTCCCAATCCTGTCCTTGGTC...CAACTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
||
3UTR-3UTR TCA 90 bp | TACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAGAGAAGTTGCATTCCTaGGCACTCTCTATCACCATC | + |
Preference number: 2 (lower is better) Translates to: YHTYKYTRKLACRRVYLAEKLHS*ALSITI Trigger: GATGGTGATAGAGAGTGCTCAGGAATGCAACTTCTC...TGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR TCA 90 bp | GAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAAGAGAAGTTGCATTCCTaGGCACTCTCTATCACCATC | + |
Preference number: 2 (lower is better) Translates to: ESVLSNTVKVRIVSPQSKEKLHS*ALSITI Trigger: GATGGTGATAGAGAGTGCTCAGGAATGCAACTTCTC...TTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR GCA 90 bp | CCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGA | + |
Preference number: 2 (lower is better) Translates to: PLSTPGLTIFLTNTQATQYGHLV*RQRLIG Trigger: TCCTATTAAACGCTGTCTGCAAACCAAATGGCCATA...CTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR GCA 90 bp | ACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGGAGTCAGCTATGAATCCATATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGA | + |
Preference number: 2 (lower is better) Translates to: TRSKAFMTSSRRESAMNPYGHLV*RQRLIG Trigger: TCCTATTAAACGCTGTCTGCAAACCAAATGGCCATA...TGGATTCATAGCTGACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | TACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAACAGATTCTTCCCCTATCCCCCCTTTCAACACCTaGTTTGACAATCTTCCTTAC | + |
Preference number: 2 (lower is better) Translates to: YSESENSKPTKQTDSSPIPPFNT*FDNLPY Trigger: GTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGG...GATAGGGGAAGAATCTGTTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CCA 90 bp | AAGCAAACAGATTCTTCCCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGTACAGCTGCTTGTTCATaGATACCGAGAAGTTGCATT | + |
Preference number: 2 (lower is better) Translates to: KQTDSSPIVVKTTFLCTCTAACS*IPRSCI Trigger: AATGCAACTTCTCGGTATCCATGAACAAGCAGCTGT...ACAGGTGCACAGGAATGTGGTTTTTACAACGATAGGGGAAGAATCTGTTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CCA 90 bp | ATATACTCGGGATCTGAAACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGACAGCTGCTTGTTCATaGATACCGAGAAGTTGCATT | + |
Preference number: 2 (lower is better) Translates to: IYSGSETRSKAFMTSSRRTAACS*IPRSCI Trigger: AATGCAACTTCTCGGTATCCATGAACAAGCAGCTGT...CCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGTTTCAGATCCCGAGTATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | TACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAACAGATTCTTCCCCTATCATGGACCCAACAATATaGTTCCTAGTCCTTCTGGAT | + |
Preference number: 2 (lower is better) Translates to: YSESENSKPTKQTDSSPIMDPTI*FLVLLD Trigger: ATCCAGAAGGACTAGGAATCATATTGTTGGGTCCAT...GATAGGGGAAGAATCTGTTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | CTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTTGAAAACCCATAACCACTaGAGTCCCTTCCACATACAT | + |
Preference number: 2 (lower is better) Translates to: LSTPGLTIFLTNTQATQLKTHNH*SPFHIH Trigger: ATGTATGTGGAAGGGACTGCAGTGGTTATGGGTTTT...CAACTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | TACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAACAGATTCTTCCCCTATCAAAACCCATAACCACTaGAGTCCCTTCCACATACAT | + |
Preference number: 2 (lower is better) Translates to: YSESENSKPTKQTDSSPIKTHNH*SPFHIH Trigger: ATGTATGTGGAAGGGACTGCAGTGGTTATGGGTTTT...GATAGGGGAAGAATCTGTTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | TCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTAGGTTAATTAAGCTTTaGCTGCCATGCCCGTACACA | + |
Preference number: 2 (lower is better) Translates to: SCITTLINIQESWLAGECRLIKL*LPCPYT Trigger: TGTGTACGGGCATGGCAGCCAAAGCTTAATTAACCT...ACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | CACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATATTTGTTTCCCCACATTaGATACTGGTCCAAGACAGC | + |
Preference number: 2 (lower is better) Translates to: HTYKYTRKLACRRVYLAIFVSPH*ILVQDS Trigger: GCTGTCTTGGACCAGTATTCAATGTGGGGAAACAAA...TATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | CACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATAACAAGAAAGCTGGCTTaGAGGAGAGTGTACTTAGCA | + |
Preference number: 2 (lower is better) Translates to: HTYKYTRKLACRRVYLAITRKLA*RRVYLA Trigger: TGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGT...TATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | TTTATATACTCGGGATCTGAAACAAGGTCCAAGGCTTTCATGACATCTTCTAGAACAGCTGCTTGTTCATaGATACCGAGAAGTTGCATT | + |
Preference number: 2 (lower is better) Translates to: FIYSGSETRSKAFMTSSRTAACS*IPRSCI Trigger: AATGCAACTTCTCGGTATCCATGAACAAGCAGCTGT...TCTAGAAGATGTCATGAAAGCCTTGGACCTTGTTTCAGATCCCGAGTATATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | AGATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAAAGATTCTGGACCACTaGAGCCCTGATCAGGAAAAA | + |
Preference number: 2 (lower is better) Translates to: RFSCITTLINIQESWLAGKILDH*SPDQEK Trigger: TTTTTCCTGATCAGGGCTCCAGTGGTCCAGAATCTT...TCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129489.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | ATGAATCCCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCACAAAAATTGACTTCTaGATTTTGATATGGAGGCTG | + |
Preference number: 2 (lower is better) Translates to: MNPPFNTWFDNLPYKYSGTKIDF*ILIWRL Trigger: CAGCCTCCATATCAAAATGCAGAAGTCAATTTTTGT...GCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGGATTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CCA 90 bp | GGAATTTTGGAGATTTCAAGTAAGAACCAACCTTACAATATCGTAAAGCTTCCAGAAGAATGTTCCACTTaGCAACTAGACTGTGCAGGA | + |
Preference number: 2 (lower is better) Translates to: GILEISSKNQPYNIVKLPEECST*QLDCAG Trigger: TCCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTC...TGGAAGCTTTACGATATTGTAAGGTTGGTTCTTACTTGAAATCTCCAAAATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129489.8 |
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3UTR-3UTR CCA 90 bp | GTAGAGATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCACAGCTGCTTGTTCATaGATACCGAGAAGTTGCATT | + |
Preference number: 2 (lower is better) Translates to: VEILMHYHTYKYTRKLACTAACS*IPRSCI Trigger: AATGCAACTTCTCGGTATCCATGAACAAGCAGCTGT...GCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAATCTCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | TCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTCCAGGCAGGTTTTTGTaGCTGATTCCATTTATAAAA | + |
Preference number: 2 (lower is better) Translates to: SCITTLINIQESWLAGECPGRFL*LIPFIK Trigger: TTTTATAAATGGAATCAGTCACAAAAACCTGCCTGG...ACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | CACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATATATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGA | + |
Preference number: 2 (lower is better) Translates to: HTYKYTRKLACRRVYLAIYGHLV*RQRLIG Trigger: TCCTATTAAACGCTGTCTGCAAACCAAATGGCCATA...TATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR TCA 90 bp | CACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACCAGGCAGGTTTTTGTaGCTGATTCCATTTATAAAA | + |
Preference number: 2 (lower is better) Translates to: HTYKYTRKLACRRVYLAIPGRFL*LIPFIK Trigger: TTTTATAAATGGAATCAGTCACAAAAACCTGCCTGG...TATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | GTAGAGATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAAAACCACATTCCTGTaGACCTGTGAACAAATAGAA | + |
Preference number: 2 (lower is better) Translates to: VEILMHYHTYKYTRKLACKTTFL*TCEQIE Trigger: TTCTATTTGTTCACAGGTGCACAGGAATGTGGTTTT...GCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAATCTCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR GCA 90 bp | GTAGAGATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCACAAAAATTGACTTCTaGATTTTGATATGGAGGCTG | + |
Preference number: 2 (lower is better) Translates to: VEILMHYHTYKYTRKLACTKIDF*ILIWRL Trigger: CAGCCTCCATATCAAAATGCAGAAGTCAATTTTTGT...GCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAATCTCTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CAA 90 bp | GACTGTGCAGGACTCCCAGAAATCCTAGCCGCTTCCTCGGGGGTCCTTCCTCTCAGAAGAATGTTCCACTaGGCAACTAGACTGTGCAGG | + |
Preference number: 3 (lower is better) Translates to: DCAGLPEILAASSGVLPLRRMFH*ATRLCR Trigger: CCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTCT...GAGAGGAAGGACCCCCGAGGAAGCGGCTAGGATTTCTGGGAGTCCTGCACAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129489.8 ENSMUST00000151529.8 |
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3UTR GCA 72 bp | CAAGGCAGAAGAATGTTCCACTTGGCAACTAGACTGTaGAGGACTCCCAGAAATCCTAGCCGCTTCCTCGGG | + |
Preference number: 3 (lower is better) Translates to: QGRRMFHLATRL*RTPRNPSRFLG Trigger: CCCGAGGAAGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129489.8 |
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3UTR CCA 72 bp | ACTGCATGCCCCGTCAGTAGGAGGTTAATTAAGCTTTaGCTGCCATGCCCGTACACAGGGTCTATCAAAGGC | + |
Preference number: 3 (lower is better) Translates to: TACPVSRRLIKL*LPCPYTGSIKG Trigger: GCCTTTGATAGACCCTGTGTACGGGCATGGCAGCCAAAGCTTAATTAACCTCCTACTGACGGGGCATGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CAA 90 bp | ACTCAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCGAAAACTCTTCTGGCTaGTTCCGAAGGCGCTTCAGG | + |
Preference number: 3 (lower is better) Translates to: TQLSEGQRSVVHSNSMYGENSSG*FRRRFR Trigger: CCTGAAGCGCCTTCGGAACAAGCCAGAAGAGTTTTC...GCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CAA 90 bp | ACTCAGGCAACTCAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAGTATGGCCATTTGGTTaGCAGACAGCGTTTAATAGG | + |
Preference number: 3 (lower is better) Translates to: TQATQLSEGQRSVVHSNSVWPFG*QTAFNR Trigger: CCTATTAAACGCTGTCTGCAAACCAAATGGCCATAC...TGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGTTGCCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR CCA 72 bp | AGCTCTTCGACAGCCAAGGCAGAAGAATGTTCCACTTaGCAACTAGACTGTGCAGGACTCCCAGAAATCCTA | + |
Preference number: 3 (lower is better) Translates to: SSSTAKAEECST*QLDCAGLPEIL Trigger: TAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTGGCTGTCGAAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129489.8 |
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3UTR-3UTR CAA 90 bp | ACTCAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCGTATGGCCATTTGGTTaGCAGACAGCGTTTAATAGG | + |
Preference number: 3 (lower is better) Translates to: TQLSEGQRSVVHSNSMYGVWPFG*QTAFNR Trigger: CCTATTAAACGCTGTCTGCAAACCAAATGGCCATAC...GCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CAA 90 bp | AAACTCTTCTGGCTTGTTCCGAAGGCGCTTCAGGGGCAACTAAAGCCATATCCTAGAAGAATGTTCCACTaGGCAACTAGACTGTGCAGG | + |
Preference number: 3 (lower is better) Translates to: KLFWLVPKALQGQLKPYPRRMFH*ATRLCR Trigger: CCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTCT...AGGATATGGCTTTAGTTGCCCCTGAAGCGCCTTCGGAACAAGCCAGAAGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129489.8 |
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3UTR CCA 72 bp | AGTCCCTTCCACATACATTACTATATACAGGCAGCGTaGCCAAGAAGACCAAGGACAGGATTGGGAATCAGG | + |
Preference number: 3 (lower is better) Translates to: SPFHIHYYIQAA*PRRPRTGLGIR Trigger: CCTGATTCCCAATCCTGTCCTTGGTCTTCTTGGCCACGCTGCCTGTATATAGTAATGTATGTGGAAGGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
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3UTR-3UTR CAA 90 bp | ACTCAGGCAACTCAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCACTTTCAACACCTGGTTaGACAATCTTCCTTACAAAT | + |
Preference number: 3 (lower is better) Translates to: TQATQLSEGQRSVVHSNSLSTPG*TIFLTN Trigger: ATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAG...TGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGTTGCCTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CAA 90 bp | ATGAATCCCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCGAAAACTCTTCTGGCTaGTTCCGAAGGCGCTTCAGG | + |
Preference number: 3 (lower is better) Translates to: MNPPFNTWFDNLPYKYSGENSSG*FRRRFR Trigger: CCTGAAGCGCCTTCGGAACAAGCCAGAAGAGTTTTC...GCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGGATTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CAA 90 bp | CATTTGGTTTGCAGACAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGTTCCGGATCATAGGTTaGGAAAACTCTTCTGGCTTG | + |
Preference number: 3 (lower is better) Translates to: HLVCRQRLIGVSSVCSMGFRIIG*ENSSGL Trigger: CAAGCCAGAAGAGTTTTCCAAACCTATGATCCGGAA...CCCCATGCTACAGACAGACGACACTCCTATTAAACGCTGTCTGCAAACCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR GCA 72 bp | GTGGTCCACAGTAACTCAATGTATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGAGTGTCGTCTGTCTGT | + |
Preference number: 3 (lower is better) Translates to: VVHSNSMYGHLV*RQRLIGVSSVC Trigger: ACAGACAGACGACACTCCTATTAAACGCTGTCTGCAAACCAAATGGCCATACATTGAGTTACTGTGGACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR GCA 72 bp | CACTCTCTATCACCATCCCATACATTAGATACTGCATaGCCCGTCAGTAGGAGGTTAATTAAGCTTTGGCTG | + |
Preference number: 3 (lower is better) Translates to: HSLSPSHTLDTA*PVSRRLIKLWL Trigger: CAGCCAAAGCTTAATTAACCTCCTACTGACGGGGCATGCAGTATCTAATGTATGGGATGGTGATAGAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CAA 90 bp | TACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAGAAAACTCTTCTGGCTaGTTCCGAAGGCGCTTCAGG | + |
Preference number: 3 (lower is better) Translates to: YHTYKYTRKLACRRVYLAENSSG*FRRRFR Trigger: CCTGAAGCGCCTTCGGAACAAGCCAGAAGAGTTTTC...TGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CAA 90 bp | ATGAATCCCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCGTATGGCCATTTGGTTaGCAGACAGCGTTTAATAGG | + |
Preference number: 3 (lower is better) Translates to: MNPPFNTWFDNLPYKYSGVWPFG*QTAFNR Trigger: CCTATTAAACGCTGTCTGCAAACCAAATGGCCATAC...GCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGGATTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CAA 90 bp | ATACATTACTATATACAGGCAGCGTGGCCAAGAAGACCAAGGACAGGATTGGGACTTTCAACACCTGGTTaGACAATCTTCCTTACAAAT | + |
Preference number: 3 (lower is better) Translates to: IHYYIQAAWPRRPRTGLGLSTPG*TIFLTN Trigger: ATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAG...TCCCAATCCTGTCCTTGGTCTTCTTGGCCACGCTGCCTGTATATAGTAATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
||
3UTR-3UTR CAA 90 bp | TGTTCATGGATACCGAGAAGTTGCATTCCTGAGCACTCTCTATCACCATCCCATCTTTCAACACCTGGTTaGACAATCTTCCTTACAAAT | + |
Preference number: 3 (lower is better) Translates to: CSWIPRSCIPEHSLSPSHLSTPG*TIFLTN Trigger: ATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAG...ATGGGATGGTGATAGAGAGTGCTCAGGAATGCAACTTCTCGGTATCCATGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CAA 90 bp | TACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAGTATGGCCATTTGGTTaGCAGACAGCGTTTAATAGG | + |
Preference number: 3 (lower is better) Translates to: YHTYKYTRKLACRRVYLAVWPFG*QTAFNR Trigger: CCTATTAAACGCTGTCTGCAAACCAAATGGCCATAC...TGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CAA 90 bp | ATATACTCGGGATCTGAAACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGAGCAAGACTCCAAATTaGTTTCCCCACATTGAATAC | + |
Preference number: 3 (lower is better) Translates to: IYSGSETRSKAFMTSSRRSKTPN*FPHIEY Trigger: GTATTCAATGTGGGGAAACAAATTTGGAGTCTTGCT...CCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGTTTCAGATCCCGAGTATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000155530.8 |
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3UTR-3UTR CAA 90 bp | AAGCAAACAGATTCTTCCCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGTCTTTCAACACCTGGTTaGACAATCTTCCTTACAAAT | + |
Preference number: 3 (lower is better) Translates to: KQTDSSPIVVKTTFLCTCLSTPG*TIFLTN Trigger: ATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAG...ACAGGTGCACAGGAATGTGGTTTTTACAACGATAGGGGAAGAATCTGTTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CAA 90 bp | TACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATTTGTTTCCCCACATaGAATACTGGTCCAAGACAG | + |
Preference number: 3 (lower is better) Translates to: YHTYKYTRKLACRRVYLAICFPT*NTGPRQ Trigger: CTGTCTTGGACCAGTATTCAATGTGGGGAAACAAAT...TGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000155530.8 |
||
3UTR TCA 72 bp | CCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGTaGACAAATAGAAGTTCCCACATAGTAGCCTTTTTA | + |
Preference number: 3 (lower is better) Translates to: PYRCKNHIPVHL*TNRSSHIVAFL Trigger: TAAAAAGGCTACTATGTGGGAACTTCTATTTGTTCACAGGTGCACAGGAATGTGGTTTTTACAACGATAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR CCA 72 bp | GTGAGTTTCGCTGCCAACAATCCAAATAGGGAATTTTaGAGATTTCAAGTAAGAACCAACCTTACAATATCG | + |
Preference number: 3 (lower is better) Translates to: VSFAANNPNREF*RFQVRTNLTIS Trigger: CGATATTGTAAGGTTGGTTCTTACTTGAAATCTCCAAAATTCCCTATTTGGATTGTTGGCAGCGAAACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CAA 90 bp | TCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTATTGACTTCTGCATTTaGATATGGAGGCTGCTAAAA | + |
Preference number: 3 (lower is better) Translates to: SCITTLINIQESWLAGECIDFCI*IWRLLK Trigger: TTTTAGCAGCCTCCATATCAAAATGCAGAAGTCAAT...ACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
3UTR-3UTR CAA 90 bp | CACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACTTTCAACACCTGGTTaGACAATCTTCCTTACAAAT | + |
Preference number: 3 (lower is better) Translates to: HTYKYTRKLACRRVYLAILSTPG*TIFLTN Trigger: ATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAG...TATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR-3UTR CAA 90 bp | AGATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAATTGACTTCTGCATTTaGATATGGAGGCTGCTAAAA | + |
Preference number: 3 (lower is better) Translates to: RFSCITTLINIQESWLAGIDFCI*IWRLLK Trigger: TTTTAGCAGCCTCCATATCAAAATGCAGAAGTCAAT...TCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | TGTTCCACTTGGCAACTAGACTGTGCAGGACTCCCAGAAATCCTAGCCGCTTCCCCGACAGTCCGGGACTaGTCTTGGTGCCCCACACCA | + |
Preference number: 4 (lower is better) Translates to: CSTWQLDCAGLPEILAASPTVRD*SWCPTP Trigger: TGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGG...GGAAGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129489.8 ENSMUST00000151529.8 |
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CDS-3UTR GCA 90 bp | CACTCTCTATCACCATCCCATACATTAGATACTGCATGCCCCGTCAGTAGGAGGCCGACAGTCCGGGACTaGTCTTGGTGCCCCACACCA | + |
Preference number: 4 (lower is better) Translates to: HSLSPSHTLDTACPVSRRPTVRD*SWCPTP Trigger: TGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGG...CCTCCTACTGACGGGGCATGCAGTATCTAATGTATGGGATGGTGATAGAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | GAATGTTCCACTTGGCAACTAGACTGTGCAGGACTCCCAGAAATCCTAGCCGCTTCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGAC | + |
Preference number: 4 (lower is better) Translates to: ECSTWQLDCAGLPEILAASSGRR*CPTVRD Trigger: GTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGA...AGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129489.8 ENSMUST00000151529.8 |
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CDS-3UTR TCA 90 bp | CACTCTCTATCACCATCCCATACATTAGATACTGCATGCCCCGTCAGTAGGAGGCTTCTGCTCTTCCTCTaGGCAATCCCGCCAGGACGA | + |
Preference number: 4 (lower is better) Translates to: HSLSPSHTLDTACPVSRRLLLFL*AIPPGR Trigger: TCGTCCTGGCGGGATTGCTCAGAGGAAGAGCAGAAG...CCTCCTACTGACGGGGCATGCAGTATCTAATGTATGGGATGGTGATAGAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | CAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGTCTTCAAAACCCATATCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGAC | + |
Preference number: 4 (lower is better) Translates to: QRLIGVSSVCSMGSSKPISSGRR*CPTVRD Trigger: GTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGA...TATGGGTTTTGAAGACCCCATGCTACAGACAGACGACACTCCTATTAAACGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | CAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCCCGACAGTCCGGGACTaGTCTTGGTGCCCCACACCA | + |
Preference number: 4 (lower is better) Translates to: QESVLSNTVKVRIVSPQSPTVRD*SWCPTP Trigger: TGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGG...GCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | TCGGGATCTGAAACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGGAGTCAAAACGCCTGGACAGGTaGAATAACAGCACAGGGGCC | + |
Preference number: 4 (lower is better) Translates to: SGSETRSKAFMTSSRRESKRLDR*NNSTGA Trigger: GGCCCCTGTGCTGTTATTGCACCTGTCCAGGCGTTT...TGACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGTTTCAGATCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | CAGCGTTTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGTCTTCAAAACCCATAAAACGCCTGGACAGGTaGAATAACAGCACAGGGGCC | + |
Preference number: 4 (lower is better) Translates to: QRLIGVSSVCSMGSSKPIKRLDR*NNSTGA Trigger: GGCCCCTGTGCTGTTATTGCACCTGTCCAGGCGTTT...TATGGGTTTTGAAGACCCCATGCTACAGACAGACGACACTCCTATTAAACGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR CAA 72 bp | AAGCTCTTCGACAGCCAAGGCAGAAGAATGTTCCACTaGGCAACTAGACTGTGCAGGACTCCCAGAAATCCT | + |
Preference number: 4 (lower is better) Translates to: KLFDSQGRRMFH*ATRLCRTPRNP Trigger: AGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTGGCTGTCGAAGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129489.8 |
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CDS-3UTR GCA 90 bp | CCAACCTTACAATATCGTAAAGCTTCCATTAGTGTTAAGAATCCTACAGCTGCTCCGACAGTCCGGGACTaGTCTTGGTGCCCCACACCA | + |
Preference number: 4 (lower is better) Translates to: PTLQYRKASISVKNPTAAPTVRD*SWCPTP Trigger: TGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGG...AGCAGCTGTAGGATTCTTAACACTAATGGAAGCTTTACGATATTGTAAGGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | ACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGGAGTCAGCTATGAATCCAAAACGCCTGGACAGGTaGAATAACAGCACAGGGGCC | + |
Preference number: 4 (lower is better) Translates to: TRSKAFMTSSRRESAMNPKRLDR*NNSTGA Trigger: GGCCCCTGTGCTGTTATTGCACCTGTCCAGGCGTTT...TGGATTCATAGCTGACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | AAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATATCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGAC | + |
Preference number: 4 (lower is better) Translates to: KKAGLQESVLSNTVKVRISSGRR*CPTVRD Trigger: GTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGA...TATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | ATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGACCGACAGTCCGGGACTaGTCTTGGTGCCCCACACCA | + |
Preference number: 4 (lower is better) Translates to: ILMHYHTYKYTRKLACRRPTVRD*SWCPTP Trigger: TGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGG...TCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | TACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCATCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGAC | + |
Preference number: 4 (lower is better) Translates to: YHTYKYTRKLACRRVYLASSGRR*CPTVRD Trigger: GTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGA...TGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | GAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAATCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGAC | + |
Preference number: 4 (lower is better) Translates to: ESVLSNTVKVRIVSPQSKSSGRR*CPTVRD Trigger: GTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGA...TTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | AGAAGACCAAGGACAGGATTGGGAATCAGGAACTCAGTTCCAATCCCTGCTCTGAAGATTCTGGACCACTaGAGCCCTGATCAGGAAAAA | + |
Preference number: 4 (lower is better) Translates to: RRPRTGLGIRNSVPIPALKILDH*SPDQEK Trigger: TTTTTCCTGATCAGGGCTCCAGTGGTCCAGAATCTT...CAGAGCAGGGATTGGAACTGAGTTCCTGATTCCCAATCCTGTCCTTGGTCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
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CDS-3UTR GCA 90 bp | CCATGCCCGTACACAGGGTCTATCAAAGGCTCATTTGCATCTTCAATTGAATTCCTAAACACAAACCCTTaGGTCCAGCGGCAGAAGATG | + |
Preference number: 4 (lower is better) Translates to: PCPYTGSIKGSFASSIEFLNTNP*VQRQKM Trigger: CATCTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAG...GAATTCAATTGAAGATGCAAATGAGCCTTTGATAGACCCTGTGTACGGGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | ACAAGGTCCAAGGCTTTCATGACATCTTCTAGAAGGGAGTCAGCTATGAATCCACTAAACACAAACCCTTaGGTCCAGCGGCAGAAGATG | + |
Preference number: 4 (lower is better) Translates to: TRSKAFMTSSRRESAMNPLNTNP*VQRQKM Trigger: CATCTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAG...TGGATTCATAGCTGACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | AAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAAAACGCCTGGACAGGTaGAATAACAGCACAGGGGCC | + |
Preference number: 4 (lower is better) Translates to: KKAGLQESVLSNTVKVRIKRLDR*NNSTGA Trigger: GGCCCCTGTGCTGTTATTGCACCTGTCCAGGCGTTT...TATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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3UTR CAA 72 bp | TTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTaGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAAC | + |
Preference number: 4 (lower is better) Translates to: LTIFLTNTQATQ*SEGQRSVVHSN Trigger: GTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129489.8 ENSMUST00000135397.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR TCA 90 bp | AGATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGACTTCTGCTCTTCCTCTaGGCAATCCCGCCAGGACGA | + |
Preference number: 4 (lower is better) Translates to: RFSCITTLINIQESWLAGLLLFL*AIPPGR Trigger: TCGTCCTGGCGGGATTGCTCAGAGGAAGAGCAGAAG...TCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028105.13 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | AAAGCAAACAGATTCTTCCCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGCTAAACACAAACCCTTaGGTCCAGCGGCAGAAGATG | + |
Preference number: 4 (lower is better) Translates to: KANRFFPYRCKNHIPVHLLNTNP*VQRQKM Trigger: CATCTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAG...CAGGTGCACAGGAATGTGGTTTTTACAACGATAGGGGAAGAATCTGTTTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR TCA 90 bp | ATGAATCCCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCGAGAAGTTGCATTCCTaGGCACTCTCTATCACCATC | + |
Preference number: 4 (lower is better) Translates to: MNPPFNTWFDNLPYKYSGEKLHS*ALSITI Trigger: GATGGTGATAGAGAGTGCTCAGGAATGCAACTTCTC...GCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGGATTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR GCA 90 bp | AAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATACTAAACACAAACCCTTaGGTCCAGCGGCAGAAGATG | + |
Preference number: 4 (lower is better) Translates to: KKAGLQESVLSNTVKVRILNTNP*VQRQKM Trigger: CATCTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAG...TATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
||
CDS-3UTR GCA 90 bp | AAAAGCAAGACTCCAAATTTGTTTCCCCACATTGAATACTGGTCCAAGACAGCACTAAACACAAACCCTTaGGTCCAGCGGCAGAAGATG | + |
Preference number: 4 (lower is better) Translates to: KSKTPNLFPHIEYWSKTALNTNP*VQRQKM Trigger: CATCTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAG...TGCTGTCTTGGACCAGTATTCAATGTGGGGAAACAAATTTGGAGTCTTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | GTAGAGATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAAACGCCTGGACAGGTaGAATAACAGCACAGGGGCC | + |
Preference number: 4 (lower is better) Translates to: VEILMHYHTYKYTRKLACKRLDR*NNSTGA Trigger: GGCCCCTGTGCTGTTATTGCACCTGTCCAGGCGTTT...GCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAATCTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | ATGAATCCCCCTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAAGGACAGCGGTCTGTaGTCCACAGTAACTCAATGT | + |
Preference number: 4 (lower is better) Translates to: MNPPFNTWFDNLPYKYSGKDSGL*STVTQC Trigger: ACATTGAGTTACTGTGGACCACAGACCGCTGTCCTT...GCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAGGGGGATTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR TCA 90 bp | AAAGCAAACAGATTCTTCCCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGAAAAATACGGTGAGGTaGGTTTCGCTGCCAACAATC | + |
Preference number: 4 (lower is better) Translates to: KANRFFPYRCKNHIPVHLKNTVR*VSLPTI Trigger: GATTGTTGGCAGCGAAACTCACCTCACCGTATTTTT...CAGGTGCACAGGAATGTGGTTTTTACAACGATAGGGGAAGAATCTGTTTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR TCA 90 bp | TTAATAGGAGTGTCGTCTGTCTGTAGCATGGGGTCTTCAAAACCCATAACCACTATGGACCCAACAATATaGTTCCTAGTCCTTCTGGAT | + |
Preference number: 4 (lower is better) Translates to: LIGVSSVCSMGSSKPITTMDPTI*FLVLLD Trigger: ATCCAGAAGGACTAGGAATCATATTGTTGGGTCCAT...AGTGGTTATGGGTTTTGAAGACCCCATGCTACAGACAGACGACACTCCTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135397.8 |
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CDS-3UTR GCA 90 bp | CTTTCAACACCTGGTTTGACAATCTTCCTTACAAATACTCAGGCAACTCAGTTGTTGGCAACTAGACTGTaGAGGACTCCCAGAAATCCT | + |
Preference number: 4 (lower is better) Translates to: LSTPGLTIFLTNTQATQLLATRL*RTPRNP Trigger: AGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAA...CAACTGAGTTGCCTGAGTATTTGTAAGGAAGATTGTCAAACCAGGTGTTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | AAGCAAACAGATTCTTCCCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGTAAGATTCTGGACCACTaGAGCCCTGATCAGGAAAAA | + |
Preference number: 4 (lower is better) Translates to: KQTDSSPIVVKTTFLCTCKILDH*SPDQEK Trigger: TTTTTCCTGATCAGGGCTCCAGTGGTCCAGAATCTT...ACAGGTGCACAGGAATGTGGTTTTTACAACGATAGGGGAAGAATCTGTTTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR TCA 90 bp | AAGCAAACAGATTCTTCCCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGTATGGACCCAACAATATaGTTCCTAGTCCTTCTGGAT | + |
Preference number: 4 (lower is better) Translates to: KQTDSSPIVVKTTFLCTCMDPTI*FLVLLD Trigger: ATCCAGAAGGACTAGGAATCATATTGTTGGGTCCAT...ACAGGTGCACAGGAATGTGGTTTTTACAACGATAGGGGAAGAATCTGTTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR GCA 90 bp | TACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCATTGGCAACTAGACTGTaGAGGACTCCCAGAAATCCT | + |
Preference number: 4 (lower is better) Translates to: YHTYKYTRKLACRRVYLALATRL*RTPRNP Trigger: AGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAA...TGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028105.13 ENSMUST00000155530.8 |
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CDS-3UTR CCA 90 bp | AAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATATTTGGAAAACTCTTCTaGCTTGTTCCGAAGGCGCTT | + |
Preference number: 4 (lower is better) Translates to: KKAGLQESVLSNTVKVRIFGKLF*LVPKAL Trigger: AAGCGCCTTCGGAACAAGCCAGAAGAGTTTTCCAAA...TATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR TCA 90 bp | GAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAATTTGTTTCCCCACATTaGATACTGGTCCAAGACAGC | + |
Preference number: 4 (lower is better) Translates to: ESVLSNTVKVRIVSPQSKFVSPH*ILVQDS Trigger: GCTGTCTTGGACCAGTATTCAATGTGGGGAAACAAA...TTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR TCA 90 bp | ATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGGTCCAAGGCTTTCATaGCATCTTCTAGAAGGGAGT | + |
Preference number: 4 (lower is better) Translates to: ILMHYHTYKYTRKLACRRGPRLS*HLLEGS Trigger: ACTCCCTTCTAGAAGATGTCATGAAAGCCTTGGACC...TCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR CCA 90 bp | GAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAAGAAGAATGTTCCACTTaGCAACTAGACTGTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: ESVLSNTVKVRIVSPQSKEECST*QLDCAG Trigger: TCCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTC...TTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR CCA 90 bp | GAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAAAGGTTAATTAAGCTTTaGCTGCCATGCCCGTACACA | + |
Preference number: 4 (lower is better) Translates to: ESVLSNTVKVRIVSPQSKRLIKL*LPCPYT Trigger: TGTGTACGGGCATGGCAGCCAAAGCTTAATTAACCT...TTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR CCA 90 bp | AAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAACAGCTGCTTGTTCATaGATACCGAGAAGTTGCATT | + |
Preference number: 4 (lower is better) Translates to: KKAGLQESVLSNTVKVRITAACS*IPRSCI Trigger: AATGCAACTTCTCGGTATCCATGAACAAGCAGCTGT...TATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR GCA 90 bp | AAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATATATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGA | + |
Preference number: 4 (lower is better) Translates to: KKAGLQESVLSNTVKVRIYGHLV*RQRLIG Trigger: TCCTATTAAACGCTGTCTGCAAACCAAATGGCCATA...TATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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3UTR CAA 72 bp | TGCCATGCCCGTACACAGGGTCTATCAAAGGCTCATTaGCATCTTCAATTGAATTCTTTATGTTTTCAATGC | + |
Preference number: 4 (lower is better) Translates to: CHARTQGLSKAH*HLQLNSLCFQC Trigger: GCATTGAAAACATAAAGAATTCAATTGAAGATGCAAATGAGCCTTTGATAGACCCTGTGTACGGGCATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000155530.8 |
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CDS-3UTR GCA 90 bp | CACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATAAAAACCCATAACCACTaGAGTCCCTTCCACATACAT | + |
Preference number: 4 (lower is better) Translates to: HTYKYTRKLACRRVYLAIKTHNH*SPFHIH Trigger: ATGTATGTGGAAGGGACTGCAGTGGTTATGGGTTTT...TATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS CCA 90 bp | GCGTCCAGCGGCAGAAGATGGTGTCCGACAGTCCGGGACTGCTCTTaGTGCCCCACACCAGCTCCAGCAGCTCTTTGGTCACTTCGGACA | + |
Preference number: 5 (lower is better) Translates to: ASSGRRWCPTVRDCS*CPTPAPAALWSLRT Trigger: TGTCCGAAGTGACCAAAGAGCTGCTGGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000028105.13 ENSMUST00000124515.2 ENSMUST00000124603.8 ENSMUST00000129489.8 ENSMUST00000129993.3 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS CCA 90 bp | GGAGGAATATGGCAGGGCATTTGGCTTGCGTCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGACTGCTCTTGGTGCCCCACACCAGCT | + |
Preference number: 5 (lower is better) Translates to: GGIWQGIWLASSGRR*CPTVRDCSWCPTPA Trigger: AGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGACGCAAGCCAAATGCCCTGCCATATTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151529.8 |
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CDS-3UTR CAA 90 bp | ACTCAGGCAACTCAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAAGTCCGGGACTGCTCTaGGTGCCCCACACCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: TQATQLSEGQRSVVHSNSSPGLL*VPHTSS Trigger: GGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACT...TGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGTTGCCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS CCA 90 bp | CTTGTTCATGGATACCGAGAAGTTCTTGCGTCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGACTGCTCTTGGTGCCCCACACCAGCT | + |
Preference number: 5 (lower is better) Translates to: LVHGYREVLASSGRR*CPTVRDCSWCPTPA Trigger: AGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGACGCAAGAACTTCTCGGTATCCATGAACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129993.3 |
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CDS-3UTR CAA 90 bp | GAATGTTCCACTTGGCAACTAGACTGTGCAGGACTCCCAGAAATCCTAGCCGCTAGTCCGGGACTGCTCTaGGTGCCCCACACCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: ECSTWQLDCAGLPEILAASPGLL*VPHTSS Trigger: GGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACT...AGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129489.8 ENSMUST00000151529.8 |
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CDS-3UTR CAA 90 bp | ACTCAGTTGAGCGAAGGACAGCGGTCTGTGGTCCACAGTAACTCAATGTATGGCAGTCCGGGACTGCTCTaGGTGCCCCACACCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: TQLSEGQRSVVHSNSMYGSPGLL*VPHTSS Trigger: GGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACT...GCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCAACTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CAA 90 bp | CAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAGTCCGGGACTGCTCTaGGTGCCCCACACCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: QESVLSNTVKVRIVSPQSSPGLL*VPHTSS Trigger: GGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACT...GCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CAA 90 bp | CACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATAAGTCCGGGACTGCTCTaGGTGCCCCACACCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: HTYKYTRKLACRRVYLAISPGLL*VPHTSS Trigger: GGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACT...TATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028105.13 ENSMUST00000129489.8 ENSMUST00000144645.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS-3UTR CAA 90 bp | CACTCTCTATCACCATCCCATACATTAGATACTGCATGCCCCGTCAGTAGGAGGTTAAGAATGTTCCACTaGGCAACTAGACTGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: HSLSPSHTLDTACPVSRRLRMFH*ATRLCR Trigger: CCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTAA...CCTCCTACTGACGGGGCATGCAGTATCTAATGTATGGGATGGTGATAGAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155530.8 |
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CDS-3UTR CAA 90 bp | AAAGCAAACAGATTCTTCCCCTATCGTTGTAAAAACCACATTCCTGTGCACCTGAGAAGAATGTTCCACTaGGCAACTAGACTGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: KANRFFPYRCKNHIPVHLRRMFH*ATRLCR Trigger: CCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTCT...CAGGTGCACAGGAATGTGGTTTTTACAACGATAGGGGAAGAATCTGTTTGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR CAA 90 bp | GAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAGTAAGCCCACAAAGCAAAGTATGGCCATTTGGTTaGCAGACAGCGTTTAATAGG | + |
Preference number: 5 (lower is better) Translates to: ESVLSNTVKVRIVSPQSKVWPFG*QTAFNR Trigger: CCTATTAAACGCTGTCTGCAAACCAAATGGCCATAC...TTTGCTTTGTGGGCTTACTATTCTCACTTTCACTGTATTGCTAAGTACACTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR CAA 90 bp | AAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATACAGTGAAAGTGAGAATAAGCAAGACTCCAAATTaGTTTCCCCACATTGAATAC | + |
Preference number: 5 (lower is better) Translates to: KKAGLQESVLSNTVKVRISKTPN*FPHIEY Trigger: GTATTCAATGTGGGGAAACAAATTTGGAGTCTTGCT...TATTCTCACTTTCACTGTATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR CAA 90 bp | ATTCTCATGCATTACCACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGATTCCGGATCATAGGTTaGGAAAACTCTTCTGGCTTG | + |
Preference number: 5 (lower is better) Translates to: ILMHYHTYKYTRKLACRRFRIIG*ENSSGL Trigger: CAAGCCAGAAGAGTTTTCCAAACCTATGATCCGGAA...TCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTGGTAATGCATGAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS-3UTR CAA 90 bp | CACACTTATAAATATACAAGAAAGCTGGCTTGCAGGAGAGTGTACTTAGCAATAATTTGTTTCCCCACATaGAATACTGGTCCAAGACAG | + |
Preference number: 5 (lower is better) Translates to: HTYKYTRKLACRRVYLAIICFPT*NTGPRQ Trigger: CTGTCTTGGACCAGTATTCAATGTGGGGAAACAAAT...TATTGCTAAGTACACTCTCCTGCAAGCCAGCTTTCTTGTATATTTATAAGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028105.13 |
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CDS CCA 72 bp | TGGCAGGGCATTTGGCTTGCGTCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGACTGCTCTTGGTGCCCC | + |
Preference number: 6 (lower is better) Translates to: WQGIWLASSGRR*CPTVRDCSWCP Trigger: GGGGCACCAAGAGCAGTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGACGCAAGCCAAATGCCCTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151529.8 |
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CDS GCA 72 bp | TCCAGCGGCAGAAGATGGTGTCCGACAGTCCGGGACTaGTCTTGGTGCCCCACACCAGCTCCAGCAGCTCTT | + |
Preference number: 6 (lower is better) Translates to: SSGRRWCPTVRD*SWCPTPAPAAL Trigger: AAGAGCTGCTGGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000028105.13 ENSMUST00000124515.2 ENSMUST00000124603.8 ENSMUST00000129489.8 ENSMUST00000129993.3 ENSMUST00000144645.8 ENSMUST00000151529.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS CAA 72 bp | CGGCAGAAGATGGTGTCCGACAGTCCGGGACTGCTCTaGGTGCCCCACACCAGCTCCAGCAGCTCTTTGGTC | + |
Preference number: 6 (lower is better) Translates to: RQKMVSDSPGLL*VPHTSSSSSLV Trigger: GACCAAAGAGCTGCTGGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGGACACCATCTTCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000028105.13 ENSMUST00000124515.2 ENSMUST00000124603.8 ENSMUST00000129489.8 ENSMUST00000129993.3 ENSMUST00000144645.8 ENSMUST00000151529.8 ENSMUST00000154899.7 ENSMUST00000155530.8 |
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CDS CCA 72 bp | GGATACCGAGAAGTTCTTGCGTCCAGCGGCAGAAGATaGTGTCCGACAGTCCGGGACTGCTCTTGGTGCCCC | + |
Preference number: 6 (lower is better) Translates to: GYREVLASSGRR*CPTVRDCSWCP Trigger: GGGGCACCAAGAGCAGTCCCGGACTGTCGGACACCATCTTCTGCCGCTGGACGCAAGAACTTCTCGGTATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129993.3 |
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CDS GCA 72 bp | ATGACCTGGAGGAGGAATATGGCAGGGCATTTGGCTTaGGTCCAGCGGCAGAAGATGGTGTCCGACAGTCCG | + |
Preference number: 6 (lower is better) Translates to: MTWRRNMAGHLA*VQRQKMVSDSP Trigger: CGGACTGTCGGACACCATCTTCTGCCGCTGGACGCAAGCCAAATGCCCTGCCATATTCCTCCTCCAGGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151529.8 |
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CDS TCA 72 bp | TCCTACAGCTGCTTGTTCATGGATACCGAGAAGTTCTaGGCAATCCCGCCAGGACGACTTCTCGGAGGAGAA | + |
Preference number: 6 (lower is better) Translates to: SYSCLFMDTEKF*AIPPGRLLGGE Trigger: TTCTCCTCCGAGAAGTCGTCCTGGCGGGATTGCTCAGAACTTCTCGGTATCCATGAACAAGCAGCTGTAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124603.8 |