RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MINAR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039313

Ensembl transcript IDs: ENSMUST00000044491.13, ENSMUST00000191465.2

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCAGGGACCACCAAGAGTTAGAAAATCAAGGAACGGAGCCACATaGCAGAGCTATAACCAGAGATCCTTTAGGGTGGCTGTGAGCTTC +
Preference number: 1 (lower is better)
Translates to: HQGPPRVRKSRNGAT*QSYNQRSFRVAVSF
Trigger: GAAGCTCACAGCCACCCTAAAGGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCTTGGTGGTCCCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 90 bp CTTCATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATaGAGCAGCAGTGATAAGAGCAGCGATCTTGCAAACCTTGGCTCG +
Preference number: 1 (lower is better)
Translates to: LHRADWHNNDKNDRA*SSSDKSSDLANLGS
Trigger: CGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
3UTR GCA 90 bp AGGATACTGTATCATCATGCTTGGCCTGGAAGTACAGCTCCCTCTTaGCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAA +
Preference number: 1 (lower is better)
Translates to: RILYHHAWPGSTAPS*LGQRNSESCFQELQ
Trigger: TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTTCCAGGCCAAGCATGATGATACAGTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 90 bp TACTGTATCATCATGCTTGGCCTGGAAGTACAGCTCCCTCTTGCCTaGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAACAAT +
Preference number: 1 (lower is better)
Translates to: YCIIMLGLEVQLPLA*AKEIQKAAFRSCNN
Trigger: ATTGTTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTTCCAGGCCAAGCATGATGATACAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 90 bp GGAAGTACAGCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTaGTTTCAGGAGCTGCAACAATTCAGATGTTCTACAGACAATGAC +
Preference number: 1 (lower is better)
Translates to: GSTAPSCLGQRNSES*FQELQQFRCSTDND
Trigger: GTCATTGTCTGTAGAACATCTGAATTGTTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR TCA 90 bp TTTGTCTCTATTCCAGCAGACTGTAGCCACAGTGGGGCCAGCTTTTaGAATTACAGAGAAAGACTTTGGGAGTCAGGAGCTGCATGTAAT +
Preference number: 1 (lower is better)
Translates to: FVSIPADCSHSGASF*NYRERLWESGAACN
Trigger: ATTACATGCAGCTCCTGACTCCCAAAGTCTTTCTCTGTAATTTCAAAAGCTGGCCCCACTGTGGCTACAGTCTGCTGGAATAGAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 90 bp CCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTaGAACAATTCAGATGTTCTACAGACAATGACAGAAGGGCAAGAT +
Preference number: 1 (lower is better)
Translates to: PLAWAKEIQKAAFRS*NNSDVLQTMTEGQD
Trigger: ATCTTGCCCTTCTGTCATTGTCTGTAGAACATCTGAATTGTTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 90 bp CACTTTCCAGAGAAAACCTCCAGTCTTACTTTGACCTTTATGGTCTaGATCGTGCTTTCAGTATGGGACAACACTGAGTTGGACTTAGAG +
Preference number: 1 (lower is better)
Translates to: HFPEKTSSLTLTFMV*IVLSVWDNTELDLE
Trigger: CTCTAAGTCCAACTCAGTGTTGTCCCATACTGAAAGCACGATCCAGACCATAAAGGTCAAAGTAAGACTGGAGGTTTTCTCTGGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR TCA 90 bp GATGTTGAGCAAGCCACAGAGCAAGAAGTTGAAAACTGCTCTTTCTaGTACTTTGATAGTTTAATCTGTGGTGTGGGCAGAATGGTTACG +
Preference number: 1 (lower is better)
Translates to: DVEQATEQEVENCSF*YFDSLICGVGRMVT
Trigger: CGTAACCATTCTGCCCACACCACAGATTAAACTATCAAAGTATCAGAAAGAGCAGTTTTCAACTTCTTGCTCTGTGGCTTGCTCAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 90 bp TCCAGTCTTACTTTGACCTTTATGGTCTGGATCGTGCTTTCAGTATaGGACAACACTGAGTTGGACTTAGAGCAAGATTGGATTTCTTTG +
Preference number: 1 (lower is better)
Translates to: SSLTLTFMVWIVLSV*DNTELDLEQDWISL
Trigger: CAAAGAAATCCAATCTTGCTCTAAGTCCAACTCAGTGTTGTCCCATACTGAAAGCACGATCCAGACCATAAAGGTCAAAGTAAGACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 90 bp GTGCTTTCAGTATGGGACAACACTGAGTTGGACTTAGAGCAAGATTaGATTTCTTTGACTACTTCCCCAGAAATGAAAAGGATATTAGAA +
Preference number: 1 (lower is better)
Translates to: VLSVWDNTELDLEQD*ISLTTSPEMKRILE
Trigger: TTCTAATATCCTTTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTCAGTGTTGTCCCATACTGAAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 90 bp GAAGGAAGGCAGGCAAGCCAACAAAAATGGAGTGAATTTGTAACATaGAGTGACTTTAAATTTGGGTGTGAAACATGTACATTTTATAAA +
Preference number: 1 (lower is better)
Translates to: EGRQASQQKWSEFVT*SDFKFGCETCTFYK
Trigger: TTTATAAAATGTACATGTTTCACACCCAAATTTAAAGTCACTGCATGTTACAAATTCACTCCATTTTTGTTGGCTTGCCTGCCTTCCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 90 bp TGTGGTGTGGGCAGAATGGTTACGCCACAGTGTGGTATAGAGTCATaGCTTACAAGAGGGTTGGGGTCGATCAGGGACTCCAAAGGATGT +
Preference number: 2 (lower is better)
Translates to: CGVGRMVTPQCGIES*LTRGLGSIRDSKGC
Trigger: ACATCCTTTGGAGTCCCTGATCGACCCCAACCCTCTTGTAAGCAATGACTCTATACCACACTGTGGCGTAACCATTCTGCCCACACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 90 bp AAGGATACTGTATCATCATGCTTGGCCTGGAAGTACAGCTCCCTCTaGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: KDTVSSCLAWKYSSL*PGPKKFRKLLSGAA
Trigger: TGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTTCCAGGCCAAGCATGATGATACAGTATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR TCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGCCCCCTACAGGTaGGAGAACTCATCCCTCATC +
Preference number: 2 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRKAPYR*ENSSLI
Trigger: GATGAGGGATGAGTTCTCTCACCTGTAGGGGGCCTT...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 90 bp GAGTGTCTTGACCCACTCTACAAAAAGGATACTGTATCATCATGCTaGGCCTGGAAGTACAGCTCCCTCTTGCCTGGGCCAAAGAAATTC +
Preference number: 2 (lower is better)
Translates to: ECLDPLYKKDTVSSC*AWKYSSLLPGPKKF
Trigger: GAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTTCCAGGCCAAGCATGATGATACAGTATCCTTTTTGTAGAGTGGGTCAAGACACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 90 bp ACAGCAAAGGTGTGGTTCATCAGCACTAGACTTGGTGCTACCTGCTaGAAGACGCCACTTTCCAGAGAAAACCTCCAGTCTTACTTTGAC +
Preference number: 2 (lower is better)
Translates to: TAKVWFISTRLGATC*KTPLSRENLQSYFD
Trigger: GTCAAAGTAAGACTGGAGGTTTTCTCTGGAAAGTGGCGTCTTCAAGCAGGTAGCACCAAGTCTAGTGCTGATGAACCACACCTTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 90 bp ACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTaGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: TRMTVHAAAVIRAAI*QTLARLNSASFRFS
Trigger: ACTAAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
3UTR CAA 90 bp ACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTGCAAACCTaGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTAGTAATGAATCA +
Preference number: 2 (lower is better)
Translates to: TVHAAAVIRAAILQT*ARLNSASFRFSNES
Trigger: TGATTCATTACTAAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
3UTR-3UTR GCA 90 bp TTGAGAAGGAGTCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTGGGAACAGTACAGCTCCCTCTTaGCTGGGCCAAAGAAATTCA +
Preference number: 2 (lower is better)
Translates to: LRRSLSTQLLSKHQSGGNSTAPS*LGQRNS
Trigger: TGAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACT...GTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGACTCCTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CCA 90 bp TTGAGAAGGAGTCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTGGGAACCAGCTCCCTCTTGCCTaGGCCAAAGAAATTCAGAAA +
Preference number: 2 (lower is better)
Translates to: LRRSLSTQLLSKHQSGGNQLPLA*AKEIQK
Trigger: TTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGCTG...GTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGACTCCTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 90 bp CATAGCCTGGAGTATAAATATCTTCCATCCAGTACTCTAAGTTGTTaGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAAC +
Preference number: 2 (lower is better)
Translates to: HSLEYKYLPSSTLSC*GLKILGSGVAPYGN
Trigger: GTTTCCATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACTGGATGGAAGATATTTATACTCCAGGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
3UTR-3UTR GCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCAGAAATTCAGAAAGCTaGTTTCAGGAGCTGCAACAA +
Preference number: 2 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSRNSES*FQELQQ
Trigger: TTGTTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCT...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR GCA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGAGGAACGGAGCCACATaGCAGAGCTATAACCAGAGA +
Preference number: 2 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLRNGAT*QSYNQR
Trigger: TCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCT...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATAGACAGAAGGGCAAGATaGAAGTCAGTAGCCCTTAAT +
Preference number: 2 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIDRRAR*KSVALN
Trigger: ATTAAGGGCTACTGACTTCCATCTTGCCCTTCTGTC...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CCA 90 bp GGGGCTGCTGCATTGCAACAGGAGCTGAGGGAAACTTATTATATTGAGGGTTGTATGGCATTCCTTATGTaGAAAAGGATAGTGTACTTT +
Preference number: 2 (lower is better)
Translates to: GAAALQQELRETYYIEGCMAFLM*KRIVYF
Trigger: AAAGTACACTATCCTTTTCCACATAAGGAATGCCAT...ACAACCCTCAATATAATAAGTTTCCCTCAGCTCCTGTTGCAATGCAGCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CCA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGGAAGCCACGTTCTTGTaGACACACATCCAGTCACAT +
Preference number: 2 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLEATFL*THIQSH
Trigger: ATGTGACTGGATGTGTGTCCACAAGAACGTGGCTTC...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CCA 90 bp GGGGCTGCTGCATTGCAACAGGAGCTGAGGGAAACTTATTATATTGAGGGTTGTAAGCTCGGCATTATTTaGAAATATTTAGGATGGATG +
Preference number: 2 (lower is better)
Translates to: GAAALQQELRETYYIEGCKLGII*KYLGWM
Trigger: CATCCATCCTAAATATTTCCAAATAATGCCGAGCTT...ACAACCCTCAATATAATAAGTTTCCCTCAGCTCCTGTTGCAATGCAGCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAATACAGAGAAAGACTTTaGGAGTCAGGAGCTGCATGT +
Preference number: 2 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKYRERL*ESGAAC
Trigger: ACATGCAGCTCCTGACTCCCAAAGTCTTTCTCTGTA...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 90 bp GTATGGGACAACACTGAGTTGGACTTAGAGCAAGATTGGATTTCTTaGACTACTTCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACA +
Preference number: 2 (lower is better)
Translates to: VWDNTELDLEQDWIS*TTSPEMKRILESST
Trigger: TGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTCAGTGTTGTCCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CCA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATAGGAAGGAGTCAGGTTaGGATTTGACAAGACTTATT +
Preference number: 2 (lower is better)
Translates to: SPEMKRILESSTESVHFYRKESG*DLTRLI
Trigger: AATAAGTCTTGTCAAATCCCAACCTGACTCCTTCCT...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR TCA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATTGCATTCATTTTCAATaGCAAGTCCTCCATTCTAAG +
Preference number: 2 (lower is better)
Translates to: SPEMKRILESSTESVHFYCIHFQ*QVLHSK
Trigger: CTTAGAATGGAGGACTTGTCATTGAAAATGAATGCA...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR TCA 72 bp CAGAGATCCTTTAGGGTGGCTGTGAGCTTCAGATGTTaGGCATACCCCAACCGGCAAGGCAAGCTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: QRSFRVAVSFRC*AYPNRQGKLPH
Trigger: GTGGGGAAGCTTGCCTTGCCGGTTGGGGTATGCTCAACATCTGAAGCTCACAGCCACCCTAAAGGATCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 72 bp ATCATGCTTGGCCTGGAAGTACAGCTCCCTCTTGCCTaGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGC +
Preference number: 3 (lower is better)
Translates to: IMLGLEVQLPLA*AKEIQKAAFRS
Trigger: GCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTTCCAGGCCAAGCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 72 bp AAGGTGTGGTTCATCAGCACTAGACTTGGTGCTACCTaGTTGAAGACGCCACTTTCCAGAGAAAACCTCCAG +
Preference number: 3 (lower is better)
Translates to: KVWFISTRLGAT*LKTPLSRENLQ
Trigger: CTGGAGGTTTTCTCTGGAAAGTGGCGTCTTCAAGCAGGTAGCACCAAGTCTAGTGCTGATGAACCACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 72 bp AGACAGAAGGCCAGTCAGTCACCTTTACCTTGGGGCTaGTGCATTGCAACAGGAGCTGAGGGAAACTTATTA +
Preference number: 3 (lower is better)
Translates to: RQKASQSPLPWG*CIATGAEGNLL
Trigger: TAATAAGTTTCCCTCAGCTCCTGTTGCAATGCAGCAGCCCCAAGGTAAAGGTGACTGACTGGCCTTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 72 bp CCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTaGACACACATCCAGTCACATCGCCAGCAACAAACG +
Preference number: 3 (lower is better)
Translates to: PLIKVRGEATFL*THIQSHRQQQT
Trigger: CGTTTGTTGCTGGCGATGTGACTGGATGTGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAAAACGCATCCAGGATTTaGTCTCTATTCCAGCAGACT +
Preference number: 3 (lower is better)
Translates to: APSCLGQRNSESCFQELQNASRI*SLFQQT
Trigger: AGTCTGCTGGAATAGAGACAAAATCCTGGATGCGTT...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR TCA 72 bp TGTGGTTCATCAGCACTAGACTTGGTGCTACCTGCTTaGAGACGCCACTTTCCAGAGAAAACCTCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: CGSSALDLVLPA*RRHFPEKTSSL
Trigger: AAGACTGGAGGTTTTCTCTGGAAAGTGGCGTCTTCAAGCAGGTAGCACCAAGTCTAGTGCTGATGAACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 72 bp TATCATCATGCTTGGCCTGGAAGTACAGCTCCCTCTTaGCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAG +
Preference number: 3 (lower is better)
Translates to: YHHAWPGSTAPS*LGQRNSESCFQ
Trigger: CTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTTCCAGGCCAAGCATGATGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 72 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTaGTTTCAGGAGCTGCAACAATTCAGATGTTCTACA +
Preference number: 3 (lower is better)
Translates to: APSCLGQRNSES*FQELQQFRCST
Trigger: TGTAGAACATCTGAATTGTTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCAGAGATCGCACCCCTTaGCTTTTGCTCTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSRDRTP*LLLFLF
Trigger: AAAGAGAAAGAGCAAAAGCAAAGGGGTGCGATCTCT...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp TTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGAGTTGTGGTATAGAGTCATaGCTTACAAGAGGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: FYQQFHLASIIPPVKGRSCGIES*LTRGLG
Trigger: CCCCAACCCTCTTGTAAGCAATGACTCTATACCACA...ACTCCTTCCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp GGGGCTGCTGCATTGCAACAGGAGCTGAGGGAAACTTATTATATTGAGGGTTGTCCACAGAGCAAGAAGTaGAAAACTGCTCTTTCTGAT +
Preference number: 3 (lower is better)
Translates to: GAAALQQELRETYYIEGCPQSKK*KTALSD
Trigger: ATCAGAAAGAGCAGTTTTCAACTTCTTGCTCTGTGG...ACAACCCTCAATATAATAAGTTTCCCTCAGCTCCTGTTGCAATGCAGCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGGCTAAATTGTCACCATaGTCTCTGCTCTTCAAGGCA +
Preference number: 3 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRAKLSP*SLLFKA
Trigger: TGCCTTGAAGAGCAGAGACAATGGTGACAATTTAGC...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR TCA 72 bp ACATCATCTTTTATGGATCCTGAGACCAGGTTTCCATaGCCTCATAAGCACAGCAAAGGTGTGGTTCATCAG +
Preference number: 3 (lower is better)
Translates to: TSSFMDPETRFP*PHKHSKGVVHQ
Trigger: CTGATGAACCACACCTTTGCTGTGCTTATGAGGTCATGGAAACCTGGTCTCAGGATCCATAAAAGATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 72 bp GAGAAAACCTCCAGTCTTACTTTGACCTTTATGGTCTaGATCGTGCTTTCAGTATGGGACAACACTGAGTTG +
Preference number: 3 (lower is better)
Translates to: EKTSSLTLTFMV*IVLSVWDNTEL
Trigger: CAACTCAGTGTTGTCCCATACTGAAAGCACGATCCAGACCATAAAGGTCAAAGTAAGACTGGAGGTTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATACAGTGGGGCCAGCTTTaGAAATTACAGAGAAAGACT +
Preference number: 3 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIQWGQL*KLQRKT
Trigger: AGTCTTTCTCTGTAATTTCAAAAGCTGGCCCCACTG...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAAAAGTACAGCTCCCTCTaGCCTGGGCCAAAGAAATTC +
Preference number: 3 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKKYSSL*PGPKKF
Trigger: GAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTT...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR TCA 72 bp CAAGCCACAGAGCAAGAAGTTGAAAACTGCTCTTTCTaGTACTTTGATAGTTTAATCTGTGGTGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: QATEQEVENCSF*YFDSLICGVGR
Trigger: TCTGCCCACACCACAGATTAAACTATCAAAGTATCAGAAAGAGCAGTTTTCAACTTCTTGCTCTGTGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 72 bp GTATGGGACAACACTGAGTTGGACTTAGAGCAAGATTaGATTTCTTTGACTACTTCCCCAGAAATGAAAAGG +
Preference number: 3 (lower is better)
Translates to: VWDNTELDLEQD*ISLTTSPEMKR
Trigger: CCTTTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTCAGTGTTGTCCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATTTACAGAGAAAGACTTaGGGAGTCAGGAGCTGCATG +
Preference number: 3 (lower is better)
Translates to: SPEMKRILESSTESVHFYLQRKT*GVRSCM
Trigger: CATGCAGCTCCTGACTCCCAAAGTCTTTCTCTGTAA...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATAAGGAAGGAGTCAGGTaGGGATTTGACAAGACTTAT +
Preference number: 3 (lower is better)
Translates to: SPEMKRILESSTESVHFYKEGVR*GFDKTY
Trigger: ATAAGTCTTGTCAAATCCCAACCTGACTCCTTCCTT...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR GCA 72 bp CAGGCAAGCCAACAAAAATGGAGTGAATTTGTAACATaGAGTGACTTTAAATTTGGGTGTGAAACATGTACA +
Preference number: 3 (lower is better)
Translates to: QASQQKWSEFVT*SDFKFGCETCT
Trigger: TGTACATGTTTCACACCCAAATTTAAAGTCACTGCATGTTACAAATTCACTCCATTTTTGTTGGCTTGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 72 bp TACAGCAAGCTCGGCATTATTTGGAAATATTTAGGATaGATGCTGGACTCCTATTGCTTTAGAAATCAAAAG +
Preference number: 3 (lower is better)
Translates to: YSKLGIIWKYLG*MLDSYCFRNQK
Trigger: CTTTTGATTTCTAAAGCAATAGGAGTCCAGCATCCATCCTAAATATTTCCAAATAATGCCGAGCTTGCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 72 bp CAATTTATGATTAGCTGGCAGCAGATGATGTGTGATTaGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: QFMISWQQMMCD*LLCVNSLNKGV
Trigger: TACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTGCTGCCAGCTAATCATAAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR-3UTR CAA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATCAAGCTCGGCATTATTaGGAAATATTTAGGATGGAT +
Preference number: 3 (lower is better)
Translates to: SPEMKRILESSTESVHFYQARHY*EIFRMD
Trigger: ATCCATCCTAAATATTTCCAAATAATGCCGAGCTTG...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR TCA 72 bp GATTCCACTTGCATAAATTATGCATACTTCCCAAAGTaGTTATTCTTACTAGCAAAATGTGTGTACACTCCA +
Preference number: 3 (lower is better)
Translates to: DSTCINYAYFPK*LFLLAKCVYTP
Trigger: TGGAGTGTACACACATTTTGCTAGTAAGAATAATCACTTTGGGAAGTATGCATAATTTATGCAAGTGGAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 72 bp ATGGCATTCCTTATGTGGAAAAGGATAGTGTACTTTTaGAAATATATTCAGAGTGTAGCTATGTCAAAGCTT +
Preference number: 3 (lower is better)
Translates to: MAFLMWKRIVYF*KYIQSVAMSKL
Trigger: AAGCTTTGACATAGCTACACTCTGAATATATTTCCAAAAGTACACTATCCTTTTCCACATAAGGAATGCCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CCA 72 bp TCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTaGGAACAGAGATCAAGCTATAATAAAATTACAACA +
Preference number: 3 (lower is better)
Translates to: SFYPIIVKAPIR*EQRSSYNKITT
Trigger: TGTTGTAATTTTATTATAGCTTGATCTCTGTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp CTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAGTGTCTGAGCTGTGCTaGCCACTGGTGCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: LGSGVAPYGNIIHSLAPIVSELC*PLVQLM
Trigger: CATCAGCTGCACCAGTGGGCAGCACAGCTCAGACAC...TATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp CATGCAGCAGCAGTGATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATCACAGGGCTGAGGGCTaGCCACAGAATAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: HAAAVIRAAILQTLARLNHRAEG*PQNRGT
Trigger: TGTCCCCCTATTCTGTGGCCAGCCCTCAGCCCTGTG...ATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAAGGGTACCCACACTACTaGTGTCTGAGCTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: APSCLGQRNSESCFQELQGYPHY*CLSCAA
Trigger: GGCAGCACAGCTCAGACACCAGTAGTGTGGGTACCC...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGGGTTGCTCTTCATGTaGCCCTTGAGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HRADWHNNDKNDRACSSSGLLFM*PLREVG
Trigger: CCCCACCTCCCTCAAGGGCCACATGAAGAGCAACCC...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp CACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATTGGGGTAGCCTCGGCTaGAGGGTCTCTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: HNNDKNDRACSSSDKSSDWGSLG*RVSHSA
Trigger: AGCTGAGTGAGAGACCCTTCAGCCGAGGCTACCCCA...ATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCTTCCGGCATTTGGATaGCTGCCTGGTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KILGSGVAPYGNIIHSLALPAFG*LPGGVA
Trigger: GGCTACCCCACCAGGCAGTCATCCAAATGCCGGAAG...AGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp CTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATATGGTTCGCCAGTCTCTaGGAGAGTTCGAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSGVAPYGNIIHSLAPIWFASL*ESSRCW
Trigger: CCAGCATCTCGAACTCTCCCAGAGACTGGCGAACCA...TATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
3UTR CAA 72 bp GGCAGAATGGTTACGCCACAGTGTGGTATAGAGTCATaGCTTACAAGAGGGTTGGGGTCGATCAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GRMVTPQCGIES*LTRGLGSIRDS
Trigger: GGAGTCCCTGATCGACCCCAACCCTCTTGTAAGCAATGACTCTATACCACACTGTGGCGTAACCATTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTAACTCTTCCTCGGAGTaGTGGACGTTTTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HRADWHNNDKNDRACSSSNSSSE*WTFSGR
Trigger: CCGGCCTGAAAACGTCCATCACTCCGAGGAAGAGTT...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp AGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTGTGGGAGCCACTGTGTaGACGGAAGACCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RAAILQTLARLNSASFRFVGATV*TEDPRR
Trigger: TCTCCGAGGGTCTTCCGTGCACACAGTGGCTCCCAC...AAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCCACAGGGCTGAGGGCTaGCCACAGAATAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSHRAEG*PQNRGT
Trigger: TGTCCCCCTATTCTGTGGCCAGCCCTCAGCCCTGTG...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAAGTGGTTGAAGAAGGGTaGCTTGTGGAGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: APSCLGQRNSESCFQELQVVEEG*LVELLL
Trigger: CAGAAGGAGCTCCACAAGCCACCCTTCTTCAACCAC...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp ACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATGGATCCAGCTTAGGTCCGTaGGAGCCACTGTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: TLSCLGLKILGSGVAPYGSSLGP*EPLCAR
Trigger: CCGTGCACACAGTGGCTCCCACGGACCTAAGCTGGA...TCCATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGCTTCCGGCATTTGGATaGCTGCCTGGTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRLPAFG*LPGGVA
Trigger: GGCTACCCCACCAGGCAGTCATCCAAATGCCGGAAG...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp AAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCTCTGGGGCTCCCCATaGCCCTCTTCTGCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: KILGSGVAPYGNIIHSLALWGSP*PSSALL
Trigger: TAACAAAGCAGAAGAGGGTCATGGGGAGCCCCAGAG...AGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp ATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCACACACTACTGGTGTCTaGGCTGTGCTGCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: IGTTMTRMTVHAAAVIRAHTTGV*AVLPTG
Trigger: ACCAGTGGGCAGCACAGCTCAGACACCAGTAGTGTG...TGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp CACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTCCTGTGGAGCCGCTaGTGCTCATGTCATCGAGAA +
Preference number: 4 (lower is better)
Translates to: HNNDKNDRACSSSDKSSDLLWSR*CSCHRE
Trigger: TTCTCGATGACATGAGCATCAGCGGCTCCACAGGAG...ATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTTCCGGTTGGTGTATGTaGTGGTTCGCCAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KILGSGVAPYGNIIHSLASGWCM*WFASLW
Trigger: CCAGAGACTGGCGAACCATCACATACACCAACCGGA...AGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp CTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAGGATGCTTCCTTCTTaGGCACCTTGTGGCAACTCA +
Preference number: 4 (lower is better)
Translates to: LGSGVAPYGNIIHSLAPIRMLPS*APCGNS
Trigger: TGAGTTGCCACAAGGTGCGCAAGAAGGAAGCATCCT...TATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp AGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATCTGGTGTCTGAGCTGTaGTGCCCACTGGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: STLSCLGLKILGSGVAPYLVSEL*CPLVQL
Trigger: CAGCTGCACCAGTGGGCAGCACAGCTCAGACACCAG...ATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp AAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTGACTGCTTCATGGCATaGCTGTCACCGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: KILGSGVAPYGNIIHSLADCFMA*LSPYLA
Trigger: GGCCAAGTACGGTGACAGGCATGCCATGAAGCAGTC...AGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAGAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAAAAGCCATCTTTGGGCTaGTTGGGCAATCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: APSCLGQRNSESCFQELQKPSLG*LGNLCC
Trigger: ACAGCACAGATTGCCCAAGCAGCCCAAAGATGGCTT...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp CTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAGGCAGGGACAAACTGTaGGCATTCCTTACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LGSGVAPYGNIIHSLAPIGRDKL*AFLTVH
Trigger: ATGGACTGTAAGGAATGCCCACAGTTTGTCCCTGCC...TATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp ATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGGTGGTTGAAGAAGGGTaGCTTGTGGAGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: IVQIGTTMTRMTVHAAAVVVEEG*LVELLL
Trigger: CAGAAGGAGCTCCACAAGCCACCCTTCTTCAACCAC...CACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGCTTTTGGCGGGCCATaGAGTCTGTTTACTGGACCT +
Preference number: 4 (lower is better)
Translates to: HRADWHNNDKNDRACSSSAFGGP*SLFTGP
Trigger: AGGTCCAGTAAACAGACTCCATGGCCCGCCAAAAGC...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp TTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGAGTTCCAGCTTAGGTCCGTaGGAGCCACTGTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: FYQQFHLASIIPPVKGRSSSLGP*EPLCAR
Trigger: CCGTGCACACAGTGGCTCCCACGGACCTAAGCTGGA...ACTCCTTCCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp TTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGAGTGGGTTGCTCTTCATGTaGCCCTTGAGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FYQQFHLASIIPPVKGRSGLLFM*PLREVG
Trigger: CCCCACCTCCCTCAAGGGCCACATGAAGAGCAACCC...ACTCCTTCCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp ACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAATGGTCCAAGAAGGCTaGCCCCGCTTCACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLSCLGLKILGSGVAPYGMVQEG*PRFTSA
Trigger: AGCTGAGGTGAAGCGGGGCCAGCCTTCTTGGACCAT...TCCATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGAGCATATTCCTCTATaGTCCAAGAAGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HRADWHNNDKNDRACSSSEHIPL*SKKAGP
Trigger: GGGGCCAGCCTTCTTGGACCATAGAGGAATATGCTC...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
3UTR CAA 72 bp GATGACCTTCGGCACTGTAGAAACGCATCCAGGATTTaGTCTCTATTCCAGCAGACTGTAGCCACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DDLRHCRNASRI*SLFQQTVATVG
Trigger: CCCCACTGTGGCTACAGTCTGCTGGAATAGAGACAAAATCCTGGATGCGTTTCTACAGTGCCGAAGGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 72 bp GACCCACTCTACAAAAAGGATACTGTATCATCATGCTaGGCCTGGAAGTACAGCTCCCTCTTGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: DPLYKKDTVSSC*AWKYSSLLPGP
Trigger: TGGCCCAGGCAAGAGGGAGCTGTACTTCCAGGCCAAGCATGATGATACAGTATCCTTTTTGTAGAGTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTCTCAGTTTGGCAAGCTaGGACAGATCAAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: HRADWHNNDKNDRACSSSLSLAS*DRSNWA
Trigger: TGCCCAGTTTGATCTGTCTCAGCTTGCCAAACTGAG...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCTTTAGGCTCTGGGGCTCCCCATaGCCCTCTTCTGCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: RKSRNGATCQSYNQRSFRLWGSP*PSSALL
Trigger: TAACAAAGCAGAAGAGGGTCATGGGGAGCCCCAGAG...CCTAAAGGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp CATGCAGCAGCAGTGATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATGCTGTTGTAGCAGGATaGCTGTATCACTCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HAAAVIRAAILQTLARLNAVVAG*LYHSCG
Trigger: TCCACAGGAGTGATACAGTCATCCTGCTACAACAGC...ATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp ATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGCTATCTCACCAATCCTaGGAACCAGTTTGCACACGC +
Preference number: 4 (lower is better)
Translates to: IVQIGTTMTRMTVHAAAVLSHQS*EPVCTR
Trigger: GCGTGTGCAAACTGGTTCTCAGGATTGGTGAGATAG...CACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTACTTCCACTGGCATCTaGGCAGCACCAGTCAGGACT +
Preference number: 4 (lower is better)
Translates to: IRAAILQTLARLNSASFRTSTGI*AAPVRT
Trigger: AGTCCTGACTGGTGCTGCTCAGATGCCAGTGGAAGT...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp CACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATTTATCTCCTCCTCGTTaGGGCTCATCCGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: HNNDKNDRACSSSDKSSDLSPPR*GSSGWC
Trigger: ACACCAACCGGATGAGCCTCAACGAGGAGGAGATAA...ATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGGGTAAGGATGAGGGCTaGACACCTGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRGKDEG*TPAPPG
Trigger: TCCTGGTGGAGCAGGTGTTCAGCCCTCATCCTTACC...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAATTCTTGACTGCTTCGTaGTTCTCTAGGTCAACAGGG +
Preference number: 4 (lower is better)
Translates to: APSCLGQRNSESCFQELQFLTAS*FSRSTG
Trigger: CCCTGTTGACCTAGAGAAGCACGAAGCAGTCAAGAA...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGGTGTCTGAGCTGTGCTaGCCACTGGTGCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRVSELC*PLVQLM
Trigger: CATCAGCTGCACCAGTGGGCAGCACAGCTCAGACAC...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp TTGAGAAGGAGTCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTGGGAACCTGGTGTCTGAGCTGTaGTGCCCACTGGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRRSLSTQLLSKHQSGGNLVSEL*CPLVQL
Trigger: CAGCTGCACCAGTGGGCAGCACAGCTCAGACACCAG...GTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGACTCCTTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCGACTGCTTCATGGCATaGCTGTCACCGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSDCFMA*LSPYLA
Trigger: GGCCAAGTACGGTGACAGGCATGCCATGAAGCAGTC...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCCCTTGTGGCAACTCATaGGCAGCTTCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSPCGNS*AASPWQ
Trigger: CTGCCAAGGAGAAGCTGCCCATGAGTTGCCACAAGG...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATGGGTACCCACACTACTaGTGTCTGAGCTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: STLSCLGLKILGSGVAPYGYPHY*CLSCAA
Trigger: GGCAGCACAGCTCAGACACCAGTAGTGTGGGTACCC...ATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp ATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGCAGGGACCTGGAAGATaGCCTGGTAAAGAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: IVQIGTTMTRMTVHAAAVQGPGR*PGKEAF
Trigger: AAAAGCCTCTTTACCAGGCCATCTTCCAGGTCCCTG...CACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCTGGTTCGCCAGTCTCTaGGAGAGTTCGAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSWFASL*ESSRCW
Trigger: CCAGCATCTCGAACTCTCCCAGAGACTGGCGAACCA...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp TTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGAGTATGGTCCAAGAAGGCTaGCCCCGCTTCACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FYQQFHLASIIPPVKGRSMVQEG*PRFTSA
Trigger: AGCTGAGGTGAAGCGGGGCCAGCCTTCTTGGACCAT...ACTCCTTCCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 72 bp GTGTGGTTCATCAGCACTAGACTTGGTGCTACCTGCTaGAAGACGCCACTTTCCAGAGAAAACCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VWFISTRLGATC*KTPLSRENLQS
Trigger: AGACTGGAGGTTTTCTCTGGAAAGTGGCGTCTTCAAGCAGGTAGCACCAAGTCTAGTGCTGATGAACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 72 bp ACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTaGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TVHAAAVIRAAI*QTLARLNSASF
Trigger: GAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATATGGGCAGAGAGTCCTaGTCTGACATGGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: STLSCLGLKILGSGVAPYMGRES*SDMGSF
Trigger: GAACGAGCCCATGTCAGATCAGGACTCTCTGCCCAT...ATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATACACACTACTGGTGTCTaGGCTGTGCTGCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIHTTGV*AVLPTG
Trigger: ACCAGTGGGCAGCACAGCTCAGACACCAGTAGTGTG...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGCTCCTGTGGAGCCGCTaGTGCTCATGTCATCGAGAA +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRLLWSR*CSCHRE
Trigger: TTCTCGATGACATGAGCATCAGCGGCTCCACAGGAG...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGTCCGGTTGGTGTATGTaGTGGTTCGCCAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRSGWCM*WFASLW
Trigger: CCAGAGACTGGCGAACCATCACATACACCAACCGGA...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp AGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATTCTTCATGTGGCCCTTaGGGGAGGTGGGGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: STLSCLGLKILGSGVAPYSSCGP*GRWGKD
Trigger: ATCCTTACCCCACCTCCCTCAAGGGCCACATGAAGA...ATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTGAGTCATCGTCCGACTaGTTCATGGCATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: IRAAILQTLARLNSASFRESSSD*FMACLS
Trigger: TGACAGGCATGCCATGAAGCAGTCGGACGATGACTC...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp AGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTGAGACAAGGAGCCGGTaGTGTTGTAGCAGGATGACT +
Preference number: 4 (lower is better)
Translates to: RAAILQTLARLNSASFRFETRSR*CCSRMT
Trigger: AGTCATCCTGCTACAACAGCACCGGCTCCTTGTCTC...AAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp CACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATGCTGTCATCAGAAGGTaGCTCACTCGTCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: HNNDKNDRACSSSDKSSDAVIRR*LTRQGV
Trigger: AACTCCTTGACGAGTGAGGCACCTTCTGATGACAGC...ATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGTTATTGGCTGGGCCTaGATCTTTTATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HRADWHNNDKNDRACSSSVIGWA*IFYLLL
Trigger: GAGGAGGAGATAAAAGATGCAGGCCCAGCCAATAAC...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp ATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCATTCTTGCGCACCTTGTaGCAACTCATGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IGTTMTRMTVHAAAVIRAFLRTL*QLMGSF
Trigger: GAAGCTGCCCATGAGTTGCCACAAGGTGCGCAAGAA...TGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp AAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTGCCTTTTGTCAGGGATaGGGGAATACACCGGATTCA +
Preference number: 4 (lower is better)
Translates to: KILGSGVAPYGNIIHSLAAFCQG*GNTPDS
Trigger: TGAATCCGGTGTATTCCCCCATCCCTGACAAAAGGC...AGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp AGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCTTTAGGTTAGGCTCCAGCTTTTaGCGGGCCATGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RKSRNGATCQSYNQRSFRLGSSF*RAMESV
Trigger: AACAGACTCCATGGCCCGCCAAAAGCTGGAGCCTAA...CCTAAAGGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTTTAGGCTCCAGCTTTTaGCGGGCCATGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NNDKNDRACSSSDKSSDLLGSSF*RAMESV
Trigger: AACAGACTCCATGGCCCGCCAAAAGCTGGAGCCTAA...AAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCCCAGGAAGCCATCTTTaGGCTGCTTGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSPGSHL*AAWAIC
Trigger: ACAGATTGCCCAAGCAGCCCAAAGATGGCTTCCTGG...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTCCAGGAAGCCATCTTTaGGCTGCTTGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: IRAAILQTLARLNSASFRPGSHL*AAWAIC
Trigger: ACAGATTGCCCAAGCAGCCCAAAGATGGCTTCCTGG...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
3UTR CAA 72 bp GTATCATCATGCTTGGCCTGGAAGTACAGCTCCCTCTaGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VSSCLAWKYSSL*PGPKKFRKLLS
Trigger: TGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGCTGTACTTCCAGGCCAAGCATGATGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 72 bp CCACAGTGTGGTATAGAGTCATTGCTTACAAGAGGGTaGGGGTCGATCAGGGACTCCAAAGGATGTAACCTA +
Preference number: 4 (lower is better)
Translates to: PQCGIESLLTRG*GSIRDSKGCNL
Trigger: TAGGTTACATCCTTTGGAGTCCCTGATCGACCCCAACCCTCTTGTAAGCAATGACTCTATACCACACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAATGGGGTAGCCTCGGCTaGAGGGTCTCTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKWGSLG*RVSHSA
Trigger: AGCTGAGTGAGAGACCCTTCAGCCGAGGCTACCCCA...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATAATGGGCAGAGAGTCCTaGTCTGACATGGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIMGRES*SDMGSF
Trigger: GAACGAGCCCATGTCAGATCAGGACTCTCTGCCCAT...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp TATCTTCCATCCAGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGGTAAGGATGAGGGCTaGACACCTGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: YLPSSTLSCLGLKILGSGGKDEG*TPAPPG
Trigger: TCCTGGTGGAGCAGGTGTTCAGCCCTCATCCTTACC...CCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACTGGATGGAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp TTGAGAAGGAGTCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTGGGAACTCTTCATGTGGCCCTTaGGGGAGGTGGGGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: LRRSLSTQLLSKHQSGGNSSCGP*GRWGKD
Trigger: ATCCTTACCCCACCTCCCTCAAGGGCCACATGAAGA...GTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGACTCCTTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCAGGATGCTTCCTTCTTaGGCACCTTGTGGCAACTCA +
Preference number: 4 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSRMLPS*APCGNS
Trigger: TGAGTTGCCACAAGGTGCGCAAGAAGGAAGCATCCT...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp ATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGTCATCTAAGCTTTCATaGTTCGCCCGCCTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: IVQIGTTMTRMTVHAAAVSSKLS*FARLLS
Trigger: TGACAAAAGGCGGGCGAAGCATGAAAGCTTAGATGA...CACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp TCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAACATGTTCTTGACTGCTTCGTaGTTCTCTAGGTCAACAGGG +
Preference number: 4 (lower is better)
Translates to: SGVAPYGNIIHSLAPINMFLTAS*FSRSTG
Trigger: CCCTGTTGACCTAGAGAAGCACGAAGCAGTCAAGAA...CATGTTTATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp TTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGAGTGAGACAAGGAGCCGGTaGTGTTGTAGCAGGATGACT +
Preference number: 4 (lower is better)
Translates to: FYQQFHLASIIPPVKGRSETRSR*CCSRMT
Trigger: AGTCATCCTGCTACAACAGCACCGGCTCCTTGTCTC...ACTCCTTCCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAAGTGGGAGCCACTGTGTaGACGGAAGACCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKVGATV*TEDPRR
Trigger: TCTCCGAGGGTCTTCCGTGCACACAGTGGCTCCCAC...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTGGCATCTCAAAGCTGTaGTTGAAGAAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: NNDKNDRACSSSDKSSDLGISKL*LKKGGL
Trigger: CAAGCCACCCTTCTTCAACCACAGCTTTGAGATGCC...AAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp TTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGAGTGCTTTTGGCGGGCCATaGAGTCTGTTTACTGGACCT +
Preference number: 4 (lower is better)
Translates to: FYQQFHLASIIPPVKGRSAFGGP*SLFTGP
Trigger: AGGTCCAGTAAACAGACTCCATGGCCCGCCAAAAGC...ACTCCTTCCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAACTTCTGTTGATCCTTTaGCACCAAGTAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: APSCLGQRNSESCFQELQLLLIL*HQVNWM
Trigger: CATCCAGTTTACTTGGTGCCAAAGGATCAACAGAAG...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTCACTGTTACTTCCACTaGCATCTGAGCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: RAAILQTLARLNSASFRFHCYFH*HLSSTS
Trigger: ACTGGTGCTGCTCAGATGCCAGTGGAAGTAACAGTG...AAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGGAGCATATTCCTCTATaGTCCAAGAAGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQREHIPL*SKKAGP
Trigger: GGGGCCAGCCTTCTTGGACCATAGAGGAATATGCTC...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp AGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTAAACTGGGCACAGAGTaGCTTGCACAGGTCTTGATA +
Preference number: 4 (lower is better)
Translates to: RAAILQTLARLNSASFRFKLGTE*LAQVLI
Trigger: TATCAAGACCTGTGCAAGTCACTCTGTGCCCAGTTT...AAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp TTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGAGTCTCAGTTTGGCAAGCTaGGACAGATCAAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: FYQQFHLASIIPPVKGRSLSLAS*DRSNWA
Trigger: TGCCCAGTTTGATCTGTCTCAGCTTGCCAAACTGAG...ACTCCTTCCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp TCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAACATGTGGGGGATACAGTCATaGGATTGTGGAAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SGVAPYGNIIHSLAPINMWGIQS*DCGSLL
Trigger: AAGAAGACTTCCACAATCTCATGACTGTATCCCCCA...CATGTTTATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGGCTGTTGTAGCAGGATaGCTGTATCACTCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRAVVAG*LYHSCG
Trigger: TCCACAGGAGTGATACAGTCATCCTGCTACAACAGC...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAAGGCTGCTGTATTTTCTaGTCCAGTTTATTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: APSCLGQRNSESCFQELQGCCIF*SSLLSF
Trigger: GAAACTCAATAAACTGGATCAGAAAATACAGCAGCC...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp TTGAGAAGGAGTCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTGGGAACTTATCTCCTCCTCGTTaGGGCTCATCCGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LRRSLSTQLLSKHQSGGNLSPPR*GSSGWC
Trigger: ACACCAACCGGATGAGCCTCAACGAGGAGGAGATAA...GTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGACTCCTTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTGCAAGACTCAAAGGATaGTTCCTTCTTGCGCACCTT +
Preference number: 4 (lower is better)
Translates to: IRAAILQTLARLNSASFRARLKG*FLLAHL
Trigger: AAGGTGCGCAAGAAGGAAGCATCCTTTGAGTCTTGC...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATAGAGTCATCGTCCGACTaGTTCATGGCATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIESSSD*FMACLS
Trigger: TGACAGGCATGCCATGAAGCAGTCGGACGATGACTC...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTGTCATACTGCCTGTCTaGCTCCTTAGATTTCCGATG +
Preference number: 4 (lower is better)
Translates to: IRAAILQTLARLNSASFRVILPV*LLRFPM
Trigger: CATCGGAAATCTAAGGAGGCAGACAGGCAGTATGAC...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp AGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATAAGCCATCTTTGGGCTaGTTGGGCAATCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: STLSCLGLKILGSGVAPYKPSLG*LGNLCC
Trigger: ACAGCACAGATTGCCCAAGCAGCCCAAAGATGGCTT...ATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp TCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAACATGGCACACTTCTCAGTTTaGCAAGCTGAGACAGATCAA +
Preference number: 4 (lower is better)
Translates to: SGVAPYGNIIHSLAPINMAHFSV*QAETDQ
Trigger: TTGATCTGTCTCAGCTTGCCAAACTGAGAAGTGTGC...CATGTTTATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp TATCTTCCATCCAGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGCCATCTTCCGGCATTTaGATGACTGCCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: YLPSSTLSCLGLKILGSGPSSGI*MTAWWG
Trigger: ACCCCACCAGGCAGTCATCCAAATGCCGGAAGATGG...CCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACTGGATGGAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGGGCATCTCAAAGCTGTaGTTGAAGAAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRGISKL*LKKGGL
Trigger: CAAGCCACCCTTCTTCAACCACAGCTTTGAGATGCC...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATATTTACTGGACCTCCCTaGACAGCGCCTGGTATCTTG +
Preference number: 4 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIFTGPP*TAPGIL
Trigger: CAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAA...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCGGGTTTAAAGATTCTTaGGTCTGCAGGTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSGFKDS*VCRSRA
Trigger: AGCTCTGGACCTGCAGACCCAAGAATCTTTAAACCC...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 72 bp GCAGCAGCAGTGATAAGAGCAGCGATCTTGCAAACCTaGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: AAAVIRAAILQT*ARLNSASFRFS
Trigger: ACTAAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACATGGGGGATACAGTCATaGGATTGTGGAAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTWGIQS*DCGSLL
Trigger: AAGAAGACTTCCACAATCTCATGACTGTATCCCCCA...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGAACTCTTCCTCGGAGTaGTGGACGTTTTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLNSSSE*WTFSGR
Trigger: CCGGCCTGAAAACGTCCATCACTCCGAGGAAGAGTT...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATACTATCTCACCAATCCTaGGAACCAGTTTGCACACGC +
Preference number: 4 (lower is better)
Translates to: TTSRFPILSVLTHSTKRILSHQS*EPVCTR
Trigger: GCGTGTGCAAACTGGTTCTCAGGATTGGTGAGATAG...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp ACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAGTTGGGATCGAGGCATaGTGTATAGAAAAGCACACT +
Preference number: 4 (lower is better)
Translates to: TLSCLGLKILGSGVAPYGVGIEA*CIEKHT
Trigger: AGTGTGCTTTTCTATACAGCATGCCTCGATCCCAAC...TCCATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp CTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAGATTGTTACGATATCTaGTGCCACCATGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LGSGVAPYGNIIHSLAPIDCYDI*CHHDFL
Trigger: AAGAAAATCATGGTGGCAGCAGATATCGTAACAATC...TATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATAGCTGTCATCAGAAGGTaGCTCACTCGTCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIAVIRR*LTRQGV
Trigger: AACTCCTTGACGAGTGAGGCACCTTCTGATGACAGC...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACAGTGCCCCCATTCATCTaGATCAGGTTGAAGATTGTT +
Preference number: 4 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTVPPFI*IRLKIV
Trigger: AACAATCTTCAACCTGATCCAGATGAATGGGGGCAC...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTGTGCCCCCATTCATCTaGATCAGGTTGAAGATTGTT +
Preference number: 4 (lower is better)
Translates to: IRAAILQTLARLNSASFRVPPFI*IRLKIV
Trigger: AACAATCTTCAACCTGATCCAGATGAATGGGGGCAC...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAACCATCTTCCGGCATTTaGATGACTGCCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKPSSGI*MTAWWG
Trigger: ACCCCACCAGGCAGTCATCCAAATGCCGGAAGATGG...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp TATCTTCCATCCAGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGTTTACTGGACCTCCCTaGACAGCGCCTGGTATCTTG +
Preference number: 4 (lower is better)
Translates to: YLPSSTLSCLGLKILGSGFTGPP*TAPGIL
Trigger: CAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAA...CCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACTGGATGGAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp CACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTCTGTTGATCCTTTaGCACCAAGTAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: HNNDKNDRACSSSDKSSDLLLIL*HQVNWM
Trigger: CATCCAGTTTACTTGGTGCCAAAGGATCAACAGAAG...ATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp ATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCACGATTTGAGTCCATTTaGTTTCACTGCATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGTTMTRMTVHAAAVIRARFESI*FHCIAS
Trigger: GCTGGCTATGCAGTGAAACCAAATGGACTCAAATCG...TGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATACAGGGACCTGGAAGATaGCCTGGTAAAGAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIQGPGR*PGKEAF
Trigger: AAAAGCCTCTTTACCAGGCCATCTTCCAGGTCCCTG...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 72 bp AGACGCCACTTTCCAGAGAAAACCTCCAGTCTTACTTaGACCTTTATGGTCTGGATCGTGCTTTCAGTATGG +
Preference number: 4 (lower is better)
Translates to: RRHFPEKTSSLT*TFMVWIVLSVW
Trigger: CCATACTGAAAGCACGATCCAGACCATAAAGGTCAAAGTAAGACTGGAGGTTTTCTCTGGAAAGTGGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTCGAACTATCACAGTCTaGCTTATGAAGCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: IRAAILQTLARLNSASFRRTITV*LMKLRQ
Trigger: TTGTCTCAGCTTCATAAGTCAGACTGTGATAGTTCG...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp TCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAACATGGGCTGCTGTATTTTCTaGTCCAGTTTATTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SGVAPYGNIIHSLAPINMGCCIF*SSLLSF
Trigger: GAAACTCAATAAACTGGATCAGAAAATACAGCAGCC...CATGTTTATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp TTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGAAGGAGTGTTGGGATCGAGGCATaGTGTATAGAAAAGCACACT +
Preference number: 4 (lower is better)
Translates to: FYQQFHLASIIPPVKGRSVGIEA*CIEKHT
Trigger: AGTGTGCTTTTCTATACAGCATGCCTCGATCCCAAC...ACTCCTTCCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATAGTTATTGGCTGGGCCTaGATCTTTTATCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIVIGWA*IFYLLL
Trigger: GAGGAGGAGATAAAAGATGCAGGCCCAGCCAATAAC...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAATTCTTGCGCACCTTGTaGCAACTCATGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKFLRTL*QLMGSF
Trigger: GAAGCTGCCCATGAGTTGCCACAAGGTGCGCAAGAA...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTGCCAATCTTTGTTATTaGCTGGGCCTGCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: NNDKNDRACSSSDKSSDLANLCY*LGLHLL
Trigger: TAAAAGATGCAGGCCCAGCCAATAACAAAGATTGGC...AAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGTATCTGCTGCCACCATaGTTTTCTTTGACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRYLLPP*FSLTAD
Trigger: ATCAGCAGTCAAAGAAAATCATGGTGGCAGCAGATA...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp AACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTCAGAGGGATTTCTATTaGAAAAGGAGCGTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: NNDKNDRACSSSDKSSDLQRDFY*KRSVRN
Trigger: ATTTCGAACGCTCCTTTTTCAATAGAAATCCCTCTG...AAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACAAGATCTCTTTCGATTTaGGTCCATTTGGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTRSLSI*VHLVSL
Trigger: CAGTGAAACCAAATGGACTCAAATCGAAAGAGATCT...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp ACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAGATCTCTTTCGATTTaGGTCCATTTGGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: TLSCLGLKILGSGVAPYGRSLSI*VHLVSL
Trigger: CAGTGAAACCAAATGGACTCAAATCGAAAGAGATCT...TCCATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGCGAACTATCACAGTCTaGCTTATGAAGCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRRTITV*LMKLRQ
Trigger: TTGTCTCAGCTTCATAAGTCAGACTGTGATAGTTCG...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATACTTCCACTGGCATCTaGGCAGCACCAGTCAGGACT +
Preference number: 4 (lower is better)
Translates to: SPEMKRILESSTESVHFYTSTGI*AAPVRT
Trigger: AGTCCTGACTGGTGCTGCTCAGATGCCAGTGGAAGT...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp TTGAGAAGGAGTCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTGGGAACAAACCTTGGCTCGTCTaGATTCAGCTTCTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: LRRSLSTQLLSKHQSGGNKPWLV*IQLLSV
Trigger: AACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTT...GTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGACTCCTTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGGGCAGGGACAAACTGTaGGCATTCCTTACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLGRDKL*AFLTVH
Trigger: ATGGACTGTAAGGAATGCCCACAGTTTGTCCCTGCC...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAAGCCTTTTGTCAGGGATaGGGGAATACACCGGATTCA +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKAFCQG*GNTPDS
Trigger: TGAATCCGGTGTATTCCCCCATCCCTGACAAAAGGC...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGCACTGTTACTTCCACTaGCATCTGAGCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLHCYFH*HLSSTS
Trigger: ACTGGTGCTGCTCAGATGCCAGTGGAAGTAACAGTG...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACAATCTTTGTTATTGGCTaGGCCTGCATCTTTTATCTC +
Preference number: 4 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTIFVIG*ACIFYL
Trigger: GAGATAAAAGATGCAGGCCCAGCCAATAACAAAGAT...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTATCTTTGTTATTGGCTaGGCCTGCATCTTTTATCTC +
Preference number: 4 (lower is better)
Translates to: RAAILQTLARLNSASFRFIFVIG*ACIFYL
Trigger: GAGATAAAAGATGCAGGCCCAGCCAATAACAAAGAT...AAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR TCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAAAAACTGGGCACAGAGTaGCTTGCACAGGTCTTGATA +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKKLGTE*LAQVLI
Trigger: TATCAAGACCTGTGCAAGTCACTCTGTGCCCAGTTT...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATGCTTCTCCTTGGCAGTaGCCCCATTCATCTGGATCA +
Preference number: 4 (lower is better)
Translates to: SPEMKRILESSTESVHFYASPWQ*PHSSGS
Trigger: TGATCCAGATGAATGGGGGCACTGCCAAGGAGAAGC...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAAGTCATACTGCCTGTCTaGCTCCTTAGATTTCCGATG +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKVILPV*LLRFPM
Trigger: CATCGGAAATCTAAGGAGGCAGACAGGCAGTATGAC...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp AGAGTTAGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCACAGTCATGAGATTGTaGAAGTCTTCTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: RVRKSRNGATCQSYNQRSTVMRL*KSSLKM
Trigger: CATCTTCAAAGAAGACTTCCACAATCTCATGACTGT...GGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCTAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTACAGTCATGAGATTGTaGAAGTCTTCTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: IRAAILQTLARLNSASFRTVMRL*KSSLKM
Trigger: CATCTTCAAAGAAGACTTCCACAATCTCATGACTGT...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR GCA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGTCATCTAAGCTTTCATaGTTCGCCCGCCTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLSSKLS*FARLLS
Trigger: TGACAAAAGGCGGGCGAAGCATGAAAGCTTAGATGA...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAAGCACACTTCTCAGTTTaGCAAGCTGAGACAGATCAA +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKAHFSV*QAETDQ
Trigger: TTGATCTGTCTCAGCTTGCCAAACTGAGAAGTGTGC...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAACGATTTGAGTCCATTTaGTTTCACTGCATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKRFESI*FHCIAS
Trigger: GCTGGCTATGCAGTGAAACCAAATGGACTCAAATCG...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp TTGAGAAGGAGTCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTGGGAACGATTGTTACGATATCTaGTGCCACCATGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LRRSLSTQLLSKHQSGGNDCYDI*CHHDFL
Trigger: AAGAAAATCATGGTGGCAGCAGATATCGTAACAATC...GTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGACTCCTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR GCA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATGCAAGACTCAAAGGATaGTTCCTTCTTGCGCACCTT +
Preference number: 4 (lower is better)
Translates to: SPEMKRILESSTESVHFYARLKG*FLLAHL
Trigger: AAGGTGCGCAAGAAGGAAGCATCCTTTGAGTCTTGC...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CCA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGGCCAATCTTTGTTATTaGCTGGGCCTGCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLANLCY*LGLHLL
Trigger: TAAAAGATGCAGGCCCAGCCAATAACAAAGATTGGC...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 72 bp CAAGACTTATTATCCAAGAAGAGTACATCTCAGATGTaGAGCAAGCCACAGAGCAAGAAGTTGAAAACTGCT +
Preference number: 4 (lower is better)
Translates to: QDLLSKKSTSQM*SKPQSKKLKTA
Trigger: AGCAGTTTTCAACTTCTTGCTCTGTGGCTTGCTCAACATCTGAGATGTACTCTTCTTGGATAATAAGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR TCA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATCAGAGGGATTTCTATTaGAAAAGGAGCGTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: SPEMKRILESSTESVHFYQRDFY*KRSVRN
Trigger: ATTTCGAACGCTCCTTTTTCAATAGAAATCCCTCTG...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
3UTR CAA 72 bp AACACTGAGTTGGACTTAGAGCAAGATTGGATTTCTTaGACTACTTCCCCAGAAATGAAAAGGATATTAGAA +
Preference number: 4 (lower is better)
Translates to: NTELDLEQDWIS*TTSPEMKRILE
Trigger: TTCTAATATCCTTTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTCAGTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS GCA 90 bp CCAGTCAGGACTGTTCTCCAGCTTAGGTCCGTGGGAGCCACTGTGTaGACGGAAGACCCTCGGAGAGGCGCTGTCATCAGAAGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PVRTVLQLRSVGATV*TEDPRRGAVIRRCL
Trigger: GAGGCACCTTCTGATGACAGCGCCTCTCCGAGGGTCTTCCGTGCACACAGTGGCTCCCACGGACCTAAGCTGGAGAACAGTCCTGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp GCATCTGAGCAGCACCAGTCAGGACTGTTCTCCAGCTTAGGTCCGTaGGAGCCACTGTGTGCACGGAAGACCCTCGGAGAGGCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: ASEQHQSGLFSSLGP*EPLCARKTLGEALS
Trigger: TGACAGCGCCTCTCCGAGGGTCTTCCGTGCACACAGTGGCTCCCACGGACCTAAGCTGGAGAACAGTCCTGACTGGTGCTGCTCAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp TGTCGGGCTGCACACCTCGGTGTCGGACCGGCAAGACTCAAAGGATaGTTCCTTCTTGCGCACCTTGTGGCAACTCATGGGCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: CRAAHLGVGPARLKG*FLLAHLVATHGQLL
Trigger: GAGAAGCTGCCCATGAGTTGCCACAAGGTGCGCAAGAAGGAAGCATCCTTTGAGTCTTGCCGGTCCGACACCGAGGTGTGCAGCCCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp GCTCCAGCTTTTGGCGGGCCATGGAGTCTGTTTACTGGACCTCCCTaGACAGCGCCTGGTATCTTGTGTTCCCATCACTGGAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: APAFGGPWSLFTGPP*TAPGILCSHHWSGS
Trigger: GGACCCACTCCAGTGATGGGAACACAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAACAGACTCCATGGCCCGCCAAAAGCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp AGCGTTCGAAATCAGGCACTTCCTCCGTGTTTAGGCTCCAGCTTTTaGCGGGCCATGGAGTCTGTTTACTGGACCTCCCTGGACAGCGCC +
Preference number: 5 (lower is better)
Translates to: SVRNQALPPCLGSSF*RAMESVYWTSLDSA
Trigger: GGCGCTGTCCAGGGAGGTCCAGTAAACAGACTCCATGGCCCGCCAAAAGCTGGAGCCTAAACACGGAGGAAGTGCCTGATTTCGAACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp CCGTGTTTAGGCTCCAGCTTTTGGCGGGCCATGGAGTCTGTTTACTaGACCTCCCTGGACAGCGCCTGGTATCTTGTGTTCCCATCACTG +
Preference number: 5 (lower is better)
Translates to: PCLGSSFWRAMESVY*TSLDSAWYLVFPSL
Trigger: CAGTGATGGGAACACAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAACAGACTCCATGGCCCGCCAAAAGCTGGAGCCTAAACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 90 bp GACAAACTGTGGGCATTCCTTACAGTCCATCTTCCGGCATTTGGATaGCTGCCTGGTGGGGTAGCCTCGGCTGAAGGGTCTCTCACTCAG +
Preference number: 5 (lower is better)
Translates to: DKLWAFLTVHLPAFG*LPGGVASAEGSLTQ
Trigger: CTGAGTGAGAGACCCTTCAGCCGAGGCTACCCCACCAGGCAGTCATCCAAATGCCGGAAGATGGACTGTAAGGAATGCCCACAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp GGCCACAGAATAGGGGGACAGGGCTTGCAGCCTATCCAGAGAGGCTaGCCGATTTTTCACCTCTTTGCTAACACCCAACAGGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: GHRIGGQGLQPIQRG*PIFHLFANTQQEVG
Trigger: CCCAACTTCCTGTTGGGTGTTAGCAAAGAGGTGAAAAATCGGGCAGCCTCTCTGGATAGGCTGCAAGCCCTGTCCCCCTATTCTGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp CTCCACCAGGAAGCCATCTTTGGGCTGCTTGGGCAATCTGTGCTGTaGGGGGATGTCATACTGCCTGTCTGCCTCCTTAGATTTCCGATG +
Preference number: 5 (lower is better)
Translates to: LHQEAIFGLLGQSVL*GDVILPVCLLRFPM
Trigger: CATCGGAAATCTAAGGAGGCAGACAGGCAGTATGACATCCCCCCACAGCACAGATTGCCCAAGCAGCCCAAAGATGGCTTCCTGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp ATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGTCAGGCCGGTTACACTaGTCCCCCTTGCCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: IVQIGTTMTRMTVHAAAVSGRLH*SPLPLE
Trigger: CTCCAGCGGCAAGGGGGACAAGTGTAACCGGCCTGA...CACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS TCA 90 bp CTGAGAACCAGTTTGCACACGCTACTCTTCAACTCTTCCTCGGAGTaGTGGACGTTTTCAGGCCGGTTACACTTGTCCCCCTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LRTSLHTLLFNSSSE*WTFSGRLHLSPLPL
Trigger: CAGCGGCAAGGGGGACAAGTGTAACCGGCCTGAAAACGTCCATCACTCCGAGGAAGAGTTGAAGAGTAGCGTGTGCAAACTGGTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp TGGGCAGAGAGTCCTGATCTGACATGGGCTCGTTCTCAATATTCATaGGGAAATAGGTCCTCTGCATCTCACAGGGCTGAGGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: WAESPDLTWARSQYS*GNRSSASHRAEGWP
Trigger: TGGCCAGCCCTCAGCCCTGTGAGATGCAGAGGACCTATTTCCCCATGAATATTGAGAACGAGCCCATGTCAGATCAGGACTCTCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp GTATTGGTTGTGGTAAGGCATCTCAAAGCTGTGGTTGAAGAAGGGTaGCTTGTGGAGCTCCTTCTGACTCTGGGGCTCCCCATGACCCTC +
Preference number: 5 (lower is better)
Translates to: VLVVVRHLKAVVEEG*LVELLLTLGLPMTL
Trigger: GAGGGTCATGGGGAGCCCCAGAGTCAGAAGGAGCTCCACAAGCCACCCTTCTTCAACCACAGCTTTGAGATGCCTTACCACAACCAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp TTGTCACCGGAGTTCCGAGCATATTCCTCTATGGTCCAAGAAGGCTaGCCCCGCTTCACCTCAGCTAGTTCAGTCAGCCGCATGTCTGTA +
Preference number: 5 (lower is better)
Translates to: LSPEFRAYSSMVQEG*PRFTSASSVSRMSV
Trigger: TACAGACATGCGGCTGACTGAACTAGCTGAGGTGAAGCGGGGCCAGCCTTCTTGGACCATAGAGGAATATGCTCGGAACTCCGGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp CTGTCAGCTTGCCTTTGTCACCGGAGTTCCGAGCATATTCCTCTATaGTCCAAGAAGGCTGGCCCCGCTTCACCTCAGCTAGTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: LSACLCHRSSEHIPL*SKKAGPASPQLVQS
Trigger: TGACTGAACTAGCTGAGGTGAAGCGGGGCCAGCCTTCTTGGACCATAGAGGAATATGCTCGGAACTCCGGTGACAAAGGCAAGCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 90 bp GGACCCCAGACAGCGATTCCAGCTTCCGCTCTATCTCACCAATCCTaGGAACCAGTTTGCACACGCTACTCTTCAACTCTTCCTCGGAGT +
Preference number: 5 (lower is better)
Translates to: GPQTAIPASALSHQS*EPVCTRYSSTLPRS
Trigger: ACTCCGAGGAAGAGTTGAAGAGTAGCGTGTGCAAACTGGTTCTCAGGATTGGTGAGATAGAGCGGAAGCTGGAATCGCTGTCTGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp ACTGTGTGCACGGAAGACCCTCGGAGAGGCGCTGTCATCAGAAGGTaGCTCACTCGTCAAGGAGTTCAGGTCAATCTGCACATTCACTTT +
Preference number: 5 (lower is better)
Translates to: TVCTEDPRRGAVIRR*LTRQGVQVNLHIHF
Trigger: AAAGTGAATGTGCAGATTGACCTGAACTCCTTGACGAGTGAGGCACCTTCTGATGACAGCGCCTCTCCGAGGGTCTTCCGTGCACACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp AAGACTCAAAGGATGCTTCCTTCTTGCGCACCTTGTGGCAACTCATaGGCAGCTTCTCCTTGGCAGTGCCCCCATTCATCTGGATCAGGT +
Preference number: 5 (lower is better)
Translates to: KTQRMLPSCAPCGNS*AASPWQCPHSSGSG
Trigger: ACCTGATCCAGATGAATGGGGGCACTGCCAAGGAGAAGCTGCCCATGAGTTGCCACAAGGTGCGCAAGAAGGAAGCATCCTTTGAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTTCCATCTTCCGGCATTaGGATGACTGCCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: HRADWHNNDKNDRACSSSSIFRH*DDCLVG
Trigger: CCCCACCAGGCAGTCATCCAAATGCCGGAAGATGGA...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp ATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGTGCTTCGCCCGCCTTTaGTCAGGGATGGGGGAATAC +
Preference number: 5 (lower is better)
Translates to: IVQIGTTMTRMTVHAAAVCFARL*SGMGEY
Trigger: GTATTCCCCCATCCCTGACAAAAGGCGGGCGAAGCA...CACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAAGAGATGAAGGTCTCTTaGATGCCTTGGCTGATGGGC +
Preference number: 5 (lower is better)
Translates to: APSCLGQRNSESCFQELQEMKVS*MPWLMG
Trigger: GCCCATCAGCCAAGGCATCAAAGAGACCTTCATCTC...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTCCGCTGGAGACCCCATaGGTGATTTTGGCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: IRAAILQTLARLNSASFRPLETP*VILARW
Trigger: CCACCTCGCCAAAATCACCAATGGGGTCTCCAGCGG...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCATCTTTGGGCTGCTaGGGCAATCTGTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: KILGSGVAPYGNIIHSLAPSLGC*GNLCCG
Trigger: CCCACAGCACAGATTGCCCAAGCAGCCCAAAGATGG...AGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAGAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp CATGCAGCAGCAGTGATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCCAGAGCTGTCAGCTaGCCTTTGTCACCGGAGTTC +
Preference number: 5 (lower is better)
Translates to: HAAAVIRAAILQTLARLNSRAVS*PLSPEF
Trigger: GAACTCCGGTGACAAAGGCAAGCTGACAGCTCTGGA...ATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS TCA 90 bp ATTGGTGATTTTGGCGAGGTGGTGCTCTGGCGAACTATCACAGTCTaGCTTATGAAGCTGAGACAAGGAGCCGGTGCTGTTGTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: IGDFGEVVLWRTITV*LMKLRQGAGAVVAG
Trigger: TCCTGCTACAACAGCACCGGCTCCTTGTCTCAGCTTCATAAGTCAGACTGTGATAGTTCGCCAGAGCACCACCTCGCCAAAATCACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp TGCTGCTCTGTCTGGGTACCCACACTACTGGTGTCTGAGCTGTGCTaGCCACTGGTGCAGCTGATGCTTTTGTCTTTAAACTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: CCSVWVPTLLVSELC*PLVQLMLLSLNFLT
Trigger: AGTCAAGAAGTTTAAAGACAAAAGCATCAGCTGCACCAGTGGGCAGCACAGCTCAGACACCAGTAGTGTGGGTACCCAGACAGAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp ACATGCTGCTCTGTCTGGGTACCCACACTACTGGTGTCTGAGCTGTaGTGCCCACTGGTGCAGCTGATGCTTTTGTCTTTAAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: TCCSVWVPTLLVSEL*CPLVQLMLLSLNFL
Trigger: CAAGAAGTTTAAAGACAAAAGCATCAGCTGCACCAGTGGGCAGCACAGCTCAGACACCAGTAGTGTGGGTACCCAGACAGAGCAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp CCTTTGGCACCAAGTAAACTGGATGCCTGTCTGGGCCTGAGAAATTaGGAGTCTGGCTGCCAGAATTTGGATAGCGTAGCTTCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: PLAPSKLDACLGLRN*ESGCQNLDSVASLQ
Trigger: CTGAAGAGAAGCTACGCTATCCAAATTCTGGCAGCCAGACTCCCAATTTCTCAGGCCCAGACAGGCATCCAGTTTACTTGGTGCCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACATGCTTCGCCCGCCTTTaGTCAGGGATGGGGGAATAC +
Preference number: 5 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTCFARL*SGMGEY
Trigger: GTATTCCCCCATCCCTGACAAAAGGCGGGCGAAGCA...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTACAGCGCCTGGTATCTaGTGTTCCCATCACTGGAGT +
Preference number: 5 (lower is better)
Translates to: HRADWHNNDKNDRACSSSTAPGI*CSHHWS
Trigger: ACTCCAGTGATGGGAACACAAGATACCAGGCGCTGT...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp TTGAGAAGGAGTCTTTCTACCCAATTATTGTCAAAGCACCAATCAGGTGGGAACTCAGGCCGGTTACACTaGTCCCCCTTGCCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LRRSLSTQLLSKHQSGGNSGRLH*SPLPLE
Trigger: CTCCAGCGGCAAGGGGGACAAGTGTAACCGGCCTGA...GTTCCCACCTGATTGGTGCTTTGACAATAATTGGGTAGAAAGACTCCTTCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp CATGCAGCAGCAGTGATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTTGAGGCTCATCCGGTaGGTGTATGTGATGGTTCGC +
Preference number: 5 (lower is better)
Translates to: HAAAVIRAAILQTLARLNLRLIR*VYVMVR
Trigger: GCGAACCATCACATACACCAACCGGATGAGCCTCAA...ATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp CATGCAGCAGCAGTGATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCTGTATACAGGGGGTaGCTCTTCATGTGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: HAAAVIRAAILQTLARLNSVYRG*LFMWPL
Trigger: CAAGGGCCACATGAAGAGCAACCCCCTGTATACAGA...ATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTATCACTGCTGCTGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS TCA 90 bp GAAGGTCTCTTTGATGCCTTGGCTGATGGGCAGAGAGTCCTGATCTaGCATGGGCTCGTTCTCAATATTCATGGGGAAATAGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: EGLFDALADGQRVLI*HGLVLNIHGEIGPL
Trigger: CAGAGGACCTATTTCCCCATGAATATTGAGAACGAGCCCATGTCAGATCAGGACTCTCTGCCCATCAGCCAAGGCATCAAAGAGACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 90 bp ATCGAGAAACCGGAAAATGTCACTGATGTCGTCGCTGACGATTTCTaGGTCATCGTCCGACTGCTTCATGGCATGCCTGTCACCGTACTT +
Preference number: 5 (lower is better)
Translates to: IEKPENVTDVVADDF*VIVRLLHGMPVTVL
Trigger: AAGTACGGTGACAGGCATGCCATGAAGCAGTCGGACGATGACTCAGAAATCGTCAGCGACGACATCAGTGACATTTTCCGGTTTCTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp TTGGGTTTAAAGATTCTTGGGTCTGCAGGTCCAGAGCTGTCAGCTTaGCTTTGTCACCGGAGTTCCGAGCATATTCCTCTATGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LGLKILGSAGPELSA*LCHRSSEHIPLWSK
Trigger: CTTGGACCATAGAGGAATATGCTCGGAACTCCGGTGACAAAGGCAAGCTGACAGCTCTGGACCTGCAGACCCAAGAATCTTTAAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS CCA 90 bp TGGCAACTCATGGGCAGCTTCTCCTTGGCAGTGCCCCCATTCATCTaGATCAGGTTGAAGATTGTTACGATATCTGCTGCCACCATGATT +
Preference number: 5 (lower is better)
Translates to: WQLMGSFSLAVPPFI*IRLKIVTISAATMI
Trigger: AATCATGGTGGCAGCAGATATCGTAACAATCTTCAACCTGATCCAGATGAATGGGGGCACTGCCAAGGAGAAGCTGCCCATGAGTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp GAAGGTCATCTAAGCTTTCATGCTTCGCCCGCCTTTTGTCAGGGATaGGGGAATACACCGGATTCAGGTATTGGTTGTGGTAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: EGHLSFHASPAFCQG*GNTPDSGIGCGKAS
Trigger: AGATGCCTTACCACAACCAATACCTGAATCCGGTGTATTCCCCCATCCCTGACAAAAGGCGGGCGAAGCATGAAAGCTTAGATGACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 90 bp CCTGTCTGCCTCCTTAGATTTCCGATGCCAATCTTTGTTATTGGCTaGGCCTGCATCTTTTATCTCCTCCTCGTTGAGGCTCATCCGGTT +
Preference number: 5 (lower is better)
Translates to: PVCLLRFPMPIFVIG*ACIFYLLLVEAHPV
Trigger: AACCGGATGAGCCTCAACGAGGAGGAGATAAAAGATGCAGGCCCAGCCAATAACAAAGATTGGCATCGGAAATCTAAGGAGGCAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATACCGCTGGAGACCCCATaGGTGATTTTGGCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIPLETP*VILARW
Trigger: CCACCTCGCCAAAATCACCAATGGGGTCTCCAGCGG...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTTTTATCTCCTCCTCGTaGAGGCTCATCCGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: KILGSGVAPYGNIIHSLAFISSS*RLIRLV
Trigger: CACCAACCGGATGAGCCTCAACGAGGAGGAGATAAA...AGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCTTTAGGACCAGGAAGCCATCTTaGGGCTGCTTGGGCAATCTG +
Preference number: 5 (lower is better)
Translates to: RKSRNGATCQSYNQRSFRTRKPS*GCLGNL
Trigger: CAGATTGCCCAAGCAGCCCAAAGATGGCTTCCTGGT...CCTAAAGGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp ACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATGGAACCAGGAAGCCATCTTaGGGCTGCTTGGGCAATCTG +
Preference number: 5 (lower is better)
Translates to: TLSCLGLKILGSGVAPYGTRKPS*GCLGNL
Trigger: CAGATTGCCCAAGCAGCCCAAAGATGGCTTCCTGGT...TCCATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp GGGGCTGCTGCATTGCAACAGGAGCTGAGGGAAACTTATTATATTGAGGGTTGTTCTGTATACAGGGGGTaGCTCTTCATGTGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GAAALQQELRETYYIEGCSVYRG*LFMWPL
Trigger: CAAGGGCCACATGAAGAGCAACCCCCTGTATACAGA...ACAACCCTCAATATAATAAGTTTCCCTCAGCTCCTGTTGCAATGCAGCAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS TCA 90 bp CTTCGTGCTTCTCTAGGTCAACAGGGGACGAGATCTCTTTCGATTTaGGTCCATTTGGTTTCACTGCATAGCCAGCAGGGAGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: LRASLGQQGTRSLSI*VHLVSLHSQQGEPS
Trigger: AGAAGGTTCTCCCTGCTGGCTATGCAGTGAAACCAAATGGACTCAAATCGAAAGAGATCTCGTCCCCTGTTGACCTAGAGAAGCACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 90 bp GCACATTCACTTTCTCCGGCTGCTGTATTTTCTGATCCAGTTTATTaGGTTTCCCAAGGACCTGGGAGATTTCCTCTCGGACCCCAGACA +
Preference number: 5 (lower is better)
Translates to: AHSLSPAAVFSDPVY*VSQGPGRFPLGPQT
Trigger: TGTCTGGGGTCCGAGAGGAAATCTCCCAGGTCCTTGGGAAACTCAATAAACTGGATCAGAAAATACAGCAGCCGGAGAAAGTGAATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp TGCCTCCTTAGATTTCCGATGCCAATCTTTGTTATTGGCTGGGCCTaGATCTTTTATCTCCTCCTCGTTGAGGCTCATCCGGTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: CLLRFPMPIFVIGWA*IFYLLLVEAHPVGV
Trigger: TACACCAACCGGATGAGCCTCAACGAGGAGGAGATAAAAGATGCAGGCCCAGCCAATAACAAAGATTGGCATCGGAAATCTAAGGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATATCCATCTTCCGGCATTaGGATGACTGCCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: TTSRFPILSVLTHSTKRISIFRH*DDCLVG
Trigger: CCCCACCAGGCAGTCATCCAAATGCCGGAAGATGGA...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATGGTCTCTTTGATGCCTaGGCTGATGGGCAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: STLSCLGLKILGSGVAPYGLFDA*ADGQRV
Trigger: GACTCTCTGCCCATCAGCCAAGGCATCAAAGAGACC...ATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTGAGATGAAGGTCTCTTaGATGCCTTGGCTGATGGGC +
Preference number: 5 (lower is better)
Translates to: NNDKNDRACSSSDKSSDLEMKVS*MPWLMG
Trigger: GCCCATCAGCCAAGGCATCAAAGAGACCTTCATCTC...AAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp TCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAACATGATCTCAAAGCTGTGGTaGAAGAAGGGTGGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SGVAPYGNIIHSLAPINMISKLW*KKGGLW
Trigger: CCACAAGCCACCCTTCTTCAACCACAGCTTTGAGAT...CATGTTTATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AGTACTCTAAGTTGTTTGGGTTTAAAGATTCTTGGGTCTGGGGTGGCTCCGTATTCTGGGCCTGAGAAATaGGGAGTCTGGCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: STLSCLGLKILGSGVAPYSGPEK*GVWLPE
Trigger: TTCTGGCAGCCAGACTCCCAATTTCTCAGGCCCAGA...ATACGGAGCCACCCCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACATTGAGGCTCATCCGGTaGGTGTATGTGATGGTTCGC +
Preference number: 5 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTLRLIR*VYVMVR
Trigger: GCGAACCATCACATACACCAACCGGATGAGCCTCAA...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp GCTCCCTCTTGCCTGGGCCAAAGAAATTCAGAAAGCTGCTTTCAGGAGCTGCAATGCCAATCTTTGTTATaGGCTGGGCCTGCATCTTTT +
Preference number: 5 (lower is better)
Translates to: APSCLGQRNSESCFQELQCQSLL*AGPASF
Trigger: AAAAGATGCAGGCCCAGCCAATAACAAAGATTGGCA...TTGCAGCTCCTGAAAGCAGCTTTCTGAATTTCTTTGGCCCAGGCAAGAGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp GGGGCTGCTGCATTGCAACAGGAGCTGAGGGAAACTTATTATATTGAGGGTTGTTTCCGATGCCAATCTTaGTTATTGGCTGGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: GAAALQQELRETYYIEGCFRCQS*LLAGPA
Trigger: TGCAGGCCCAGCCAATAACAAAGATTGGCATCGGAA...ACAACCCTCAATATAATAAGTTTCCCTCAGCTCCTGTTGCAATGCAGCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS GCA 90 bp AGTAAACTGGATGCCTGTCTGGGCCTGAGAAATTGGGAGTCTGGCTaGCAGAATTTGGATAGCGTAGCTTCTCTTCAGAGGGATTTCTAT +
Preference number: 5 (lower is better)
Translates to: SKLDACLGLRNWESG*QNLDSVASLQRDFY
Trigger: ATAGAAATCCCTCTGAAGAGAAGCTACGCTATCCAAATTCTGGCAGCCAGACTCCCAATTTCTCAGGCCCAGACAGGCATCCAGTTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp AACAGGGGACGAGATCTCTTTCGATTTGAGTCCATTTGGTTTCACTaGATAGCCAGCAGGGAGAACCTTCTGTTGATCCTTTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: NRGRDLFRFESIWFH*IASRENLLLILWHQ
Trigger: TTGGTGCCAAAGGATCAACAGAAGGTTCTCCCTGCTGGCTATGCAGTGAAACCAAATGGACTCAAATCGAAAGAGATCTCGTCCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATAGGTCTCTTTGATGCCTaGGCTGATGGGCAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: TTSRFPILSVLTHSTKRIGLFDA*ADGQRV
Trigger: GACTCTCTGCCCATCAGCCAAGGCATCAAAGAGACC...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp TCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAACATGCTTTTCTTTAAGGCCTaGACACGCAGGCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: SGVAPYGNIIHSLAPINMLFFKA*TRRLSL
Trigger: CAGTGAAAGCCTGCGTGTCAAGGCCTTAAAGAAAAG...CATGTTTATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGTTTATCTCCTCCTCGTaGAGGCTCATCCGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRFISSS*RLIRLV
Trigger: CACCAACCGGATGAGCCTCAACGAGGAGGAGATAAA...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp ATAAGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTTTCCGATGCCAATCTTaGTTATTGGCTGGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: IRAAILQTLARLNSASFRFRCQS*LLAGPA
Trigger: TGCAGGCCCAGCCAATAACAAAGATTGGCATCGGAA...ACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGATCTCAAAGCTGTGGTaGAAGAAGGGTGGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRISKLW*KKGGLW
Trigger: CCACAAGCCACCCTTCTTCAACCACAGCTTTGAGAT...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp ACAACAAGCAGATTCCCTATCCTGAGTGTCTTGACCCACTCTACAAAAAGGATAACAGCGCCTGGTATCTaGTGTTCCCATCACTGGAGT +
Preference number: 5 (lower is better)
Translates to: TTSRFPILSVLTHSTKRITAPGI*CSHHWS
Trigger: ACTCCAGTGATGGGAACACAAGATACCAGGCGCTGT...TATCCTTTTTGTAGAGTGGGTCAAGACACTCAGGATAGGGAATCTGCTTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTAGGGAGAACCTTCTGTaGATCCTTTGGCACCAAGTA +
Preference number: 5 (lower is better)
Translates to: NNDKNDRACSSSDKSSDLRENLL*ILWHQV
Trigger: TACTTGGTGCCAAAGGATCAACAGAAGGTTCTCCCT...AAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp CTTGGGTCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATATTGTCTTTAAACTTCTaGACTGCTTCGTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LGSGVAPYGNIIHSLAPILSLNF*TASCFS
Trigger: AGAGAAGCACGAAGCAGTCAAGAAGTTTAAAGACAA...TATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACACTTTTCTTTAAGGCCTaGACACGCAGGCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTLFFKA*TRRLSL
Trigger: CAGTGAAAGCCTGCGTGTCAAGGCCTTAAAGAAAAG...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp TCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAACATGTGCCAATCTTTGTTATaGGCTGGGCCTGCATCTTTT +
Preference number: 5 (lower is better)
Translates to: SGVAPYGNIIHSLAPINMCQSLL*AGPASF
Trigger: AAAAGATGCAGGCCCAGCCAATAACAAAGATTGGCA...CATGTTTATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS TCA 90 bp TGCCAGAATTTGGATAGCGTAGCTTCTCTTCAGAGGGATTTCTATTaGAAAAGGAGCGTTCGAAATCAGGCACTTCCTCCGTGTTTAGGC +
Preference number: 5 (lower is better)
Translates to: CQNLDSVASLQRDFY*KRSVRNQALPPCLG
Trigger: GCCTAAACACGGAGGAAGTGCCTGATTTCGAACGCTCCTTTTTCAATAGAAATCCCTCTGAAGAGAAGCTACGCTATCCAAATTCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATATAGGGGGACAGGGCTaGCAGCCTATCCAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: SPEMKRILESSTESVHFYIGGQG*QPIQRG
Trigger: GCCTCTCTGGATAGGCTGCAAGCCCTGTCCCCCTAT...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCTTTAGGCCTTCTGTTGATCCTTaGGCACCAAGTAAACTGGAT +
Preference number: 5 (lower is better)
Translates to: RKSRNGATCQSYNQRSFRPSVDP*APSKLD
Trigger: ATCCAGTTTACTTGGTGCCAAAGGATCAACAGAAGG...CCTAAAGGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTCCTTCTGTTGATCCTTaGGCACCAAGTAAACTGGAT +
Preference number: 5 (lower is better)
Translates to: NNDKNDRACSSSDKSSDLPSVDP*APSKLD
Trigger: ATCCAGTTTACTTGGTGCCAAAGGATCAACAGAAGG...AAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp CATCGTGCAGATTGGCACAACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGTGCAGCTGATGCTTTaGTCTTTAAACTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: HRADWHNNDKNDRACSSSVQLML*SLNFLT
Trigger: AGTCAAGAAGTTTAAAGACAAAAGCATCAGCTGCAC...ACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTTGTGCCAATCTGCACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGTCCAGAGCTGTCAGCTaGCCTTTGTCACCGGAGTTC +
Preference number: 5 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLSRAVS*PLSPEF
Trigger: GAACTCCGGTGACAAAGGCAAGCTGACAGCTCTGGA...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATCCATCTTTGGGCTGCTaGGGCAATCTGTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SPEMKRILESSTESVHFYPSLGC*GNLCCG
Trigger: CCCACAGCACAGATTGCCCAAGCAGCCCAAAGATGG...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS TCA 90 bp ACTTCTCAGTTTGGCAAGCTGAGACAGATCAAACTGGGCACAGAGTaGCTTGCACAGGTCTTGATAGGAAACAGTATTTTGTTTACTGTC +
Preference number: 5 (lower is better)
Translates to: TSQFGKLRQIKLGTE*LAQVLIGNSILFTV
Trigger: GACAGTAAACAAAATACTGTTTCCTATCAAGACCTGTGCAAGTCACTCTGTGCCCAGTTTGATCTGTCTCAGCTTGCCAAACTGAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 90 bp TCAGTTTGGCAAGCTGAGACAGATCAAACTGGGCACAGAGTGACTTaGACAGGTCTTGATAGGAAACAGTATTTTGTTTACTGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SVWQAETDQTGHRVT*TGLDRKQYFVYCPV
Trigger: AACTGGACAGTAAACAAAATACTGTTTCCTATCAAGACCTGTGCAAGTCACTCTGTGCCCAGTTTGATCTGTCTCAGCTTGCCAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp TCTGGGGTGGCTCCGTATGGAAACATAATCCATAGCTTGGCTCCCATAAACATGTTCATCTGGATCAGGTaGAAGATTGTTACGATATCT +
Preference number: 5 (lower is better)
Translates to: SGVAPYGNIIHSLAPINMFIWIR*KIVTIS
Trigger: AGATATCGTAACAATCTTCAACCTGATCCAGATGAA...CATGTTTATGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCCACCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACATCAGAGGGATTTCTATaGAAAAAGGAGCGTTCGAAA +
Preference number: 5 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTSEGFL*KKERSK
Trigger: TTTCGAACGCTCCTTTTTCAATAGAAATCCCTCTGA...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AACAATGACAAGAATGACCGTGCATGCAGCAGCAGTGATAAGAGCAGCGATCTTTCAGAGGGATTTCTATaGAAAAAGGAGCGTTCGAAA +
Preference number: 5 (lower is better)
Translates to: NNDKNDRACSSSDKSSDLSEGFL*KKERSK
Trigger: TTTCGAACGCTCCTTTTTCAATAGAAATCCCTCTGA...AAGATCGCTGCTCTTATCACTGCTGCTGCATGCACGGTCATTCTTGTCATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp TCCCCAGAAATGAAAAGGATATTAGAAAGTTCTACAGAATCCGTTCACTTCTATTCTGGGCCTGAGAAATaGGGAGTCTGGCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SPEMKRILESSTESVHFYSGPEK*GVWLPE
Trigger: TTCTGGCAGCCAGACTCCCAATTTCTCAGGCCCAGA...ATAGAAGTGAACGGATTCTGTAGAACTTTCTAATATCCTTTTCATTTCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCTTTAGGGAGATCTCTTTCGATTaGAGTCCATTTGGTTTCACT +
Preference number: 5 (lower is better)
Translates to: RKSRNGATCQSYNQRSFREISFD*SPFGFT
Trigger: AGTGAAACCAAATGGACTCAAATCGAAAGAGATCTC...CCTAAAGGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AGAGCAGCGATCTTGCAAACCTTGGCTCGTCTGAATTCAGCTTCTTTCCGTTTTGAGATCTCTTTCGATTaGAGTCCATTTGGTTTCACT +
Preference number: 5 (lower is better)
Translates to: RAAILQTLARLNSASFRFEISFD*SPFGFT
Trigger: AGTGAAACCAAATGGACTCAAATCGAAAGAGATCTC...AAAACGGAAAGAAGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS-3UTR CAA 90 bp AGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCTTTAGGTTGTCTTTAAACTTCTaGACTGCTTCGTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RKSRNGATCQSYNQRSFRLSLNF*TASCFS
Trigger: AGAGAAGCACGAAGCAGTCAAGAAGTTTAAAGACAA...CCTAAAGGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AAGTCAGTAGCCCTTAATAAAAGTCCGAGGAGAAGCCACGTTCTTGTGGACACAGTGCAGCTGATGCTTTaGTCTTTAAACTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: KSVALNKSPRRSHVLVDTVQLML*SLNFLT
Trigger: AGTCAAGAAGTTTAAAGACAAAAGCATCAGCTGCAC...TGTGTCCACAAGAACGTGGCTTCTCCTCGGACTTTTATTAAGGGCTACTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAAGCGATCTTGCAAACCTaGGCTCGTCTGAATTCAGCT +
Preference number: 5 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKAILQT*ARLNSA
Trigger: AGCTGAATTCAGACGAGCCAAGGTTTGCAAGATCGC...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp GAGTTGGACTTAGAGCAAGATTGGATTTCTTTGACTACTTCCCCAGAAATGAAAATAAGAGCAGCGATCTaGCAAACCTTGGCTCGTCTG +
Preference number: 5 (lower is better)
Translates to: ELDLEQDWISLTTSPEMKIRAAI*QTLARL
Trigger: CAGACGAGCCAAGGTTTGCAAGATCGCTGCTCTTAT...TTTCATTTCTGGGGAAGTAGTCAAAGAAATCCAATCTTGCTCTAAGTCCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp CAGATGATGTGTGATTGGCTTCTTTGTGTCAATAGTTTAAACAAGGGAGTACTGAGGGAGAACCTTCTGTaGATCCTTTGGCACCAAGTA +
Preference number: 5 (lower is better)
Translates to: QMMCDWLLCVNSLNKGVLRENLL*ILWHQV
Trigger: TACTTGGTGCCAAAGGATCAACAGAAGGTTCTCCCT...CAGTACTCCCTTGTTTAAACTATTGACACAAAGAAGCCAATCACACATCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AGAAAATCAAGGAACGGAGCCACATGCCAGAGCTATAACCAGAGATCCTTTAGGAGTACTCTAAGTTGTTaGGGTTTAAAGATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: RKSRNGATCQSYNQRSFRSTLSC*GLKILG
Trigger: CCCAAGAATCTTTAAACCCAAACAACTTAGAGTACT...CCTAAAGGATCTCTGGTTATAGCTCTGGCATGTGGCTCCGTTCCTTGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS-3UTR CAA 90 bp AGCTTCATTTTATCAGCAGTTTCATCTGGCCTCCATAATCCCACCTGTCAAAGGTTCATCTGGATCAGGTaGAAGATTGTTACGATATCT +
Preference number: 5 (lower is better)
Translates to: SFILSAVSSGLHNPTCQRFIWIR*KIVTIS
Trigger: AGATATCGTAACAATCTTCAACCTGATCCAGATGAA...CCTTTGACAGGTGGGATTATGGAGGCCAGATGAAACTGCTGATAAAATGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS CCA 72 bp CAGCACCAGTCAGGACTGTTCTCCAGCTTAGGTCCGTaGGAGCCACTGTGTGCACGGAAGACCCTCGGAGAG +
Preference number: 6 (lower is better)
Translates to: QHQSGLFSSLGP*EPLCARKTLGE
Trigger: CTCTCCGAGGGTCTTCCGTGCACACAGTGGCTCCCACGGACCTAAGCTGGAGAACAGTCCTGACTGGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 72 bp ACTGTTCTCCAGCTTAGGTCCGTGGGAGCCACTGTGTaGACGGAAGACCCTCGGAGAGGCGCTGTCATCAGA +
Preference number: 6 (lower is better)
Translates to: TVLQLRSVGATV*TEDPRRGAVIR
Trigger: TCTGATGACAGCGCCTCTCCGAGGGTCTTCCGTGCACACAGTGGCTCCCACGGACCTAAGCTGGAGAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp GTGTCGGACCGGCAAGACTCAAAGGATGCTTCCTTCTTGCGCACCTaGTGGCAACTCATGGGCAGCTTCTCCTTGGCAGTGCCCCCATTC +
Preference number: 6 (lower is better)
Translates to: VSDRQDSKDASFLRT*WQLMGSFSLAVPPF
Trigger: GAATGGGGGCACTGCCAAGGAGAAGCTGCCCATGAGTTGCCACAAGGTGCGCAAGAAGGAAGCATCCTTTGAGTCTTGCCGGTCCGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 72 bp GCACACCTCGGTGTCGGACCGGCAAGACTCAAAGGATaGTTCCTTCTTGCGCACCTTGTGGCAACTCATGGG +
Preference number: 6 (lower is better)
Translates to: AHLGVGPARLKG*FLLAHLVATHG
Trigger: CCCATGAGTTGCCACAAGGTGCGCAAGAAGGAAGCATCCTTTGAGTCTTGCCGGTCCGACACCGAGGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 72 bp TCAGCTCACAGTTCAGAGGCTCACAAACTGTCGGGCTaGACACCTCGGTGTCGGACCGGCAAGACTCAAAGG +
Preference number: 6 (lower is better)
Translates to: SAHSSEAHKLSG*TPRCRTGKTQR
Trigger: CCTTTGAGTCTTGCCGGTCCGACACCGAGGTGTGCAGCCCGACAGTTTGTGAGCCTCTGAACTGTGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp GGCTCCAGCTTTTGGCGGGCCATGGAGTCTGTTTACTaGACCTCCCTGGACAGCGCCTGGTATCTTGTGTTC +
Preference number: 6 (lower is better)
Translates to: GSSFWRAMESVY*TSLDSAWYLVF
Trigger: GAACACAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAACAGACTCCATGGCCCGCCAAAAGCTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp TGGGCATTCCTTACAGTCCATCTTCCGGCATTTGGATaGCTGCCTGGTGGGGTAGCCTCGGCTGAAGGGTCT +
Preference number: 6 (lower is better)
Translates to: WAFLTVHLPAFG*LPGGVASAEGS
Trigger: AGACCCTTCAGCCGAGGCTACCCCACCAGGCAGTCATCCAAATGCCGGAAGATGGACTGTAAGGAATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 72 bp ACGGAAGACCCTCGGAGAGGCGCTGTCATCAGAAGGTaGCTCACTCGTCAAGGAGTTCAGGTCAATCTGCAC +
Preference number: 6 (lower is better)
Translates to: TEDPRRGAVIRR*LTRQGVQVNLH
Trigger: GTGCAGATTGACCTGAACTCCTTGACGAGTGAGGCACCTTCTGATGACAGCGCCTCTCCGAGGGTCTTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp TTTGGCGGGCCATGGAGTCTGTTTACTGGACCTCCCTaGACAGCGCCTGGTATCTTGTGTTCCCATCACTGG +
Preference number: 6 (lower is better)
Translates to: FGGPWSLFTGPP*TAPGILCSHHW
Trigger: CCAGTGATGGGAACACAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAACAGACTCCATGGCCCGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp GAGTTCCGAGCATATTCCTCTATGGTCCAAGAAGGCTaGCCCCGCTTCACCTCAGCTAGTTCAGTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: EFRAYSSMVQEG*PRFTSASSVSR
Trigger: GCGGCTGACTGAACTAGCTGAGGTGAAGCGGGGCCAGCCTTCTTGGACCATAGAGGAATATGCTCGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp TTGTCCCCCTTGCCGCTGGAGACCCCATTGGTGATTTaGGCGAGGTGGTGCTCTGGCGAACTATCACAGTCT +
Preference number: 6 (lower is better)
Translates to: LSPLPLETPLVI*ARWCSGELSQS
Trigger: AGACTGTGATAGTTCGCCAGAGCACCACCTCGCCAAAATCACCAATGGGGTCTCCAGCGGCAAGGGGGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp CCCACGTGCTGCAGGTCCAGAGCTGTCAGCTTGCCTTaGTCACCGGAGTTCCGAGCATATTCCTCTATGGTC +
Preference number: 6 (lower is better)
Translates to: PTCCRSRAVSLP*SPEFRAYSSMV
Trigger: GACCATAGAGGAATATGCTCGGAACTCCGGTGACAAAGGCAAGCTGACAGCTCTGGACCTGCAGCACGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191465.2
CDS CCA 72 bp AGGATGCTTCCTTCTTGCGCACCTTGTGGCAACTCATaGGCAGCTTCTCCTTGGCAGTGCCCCCATTCATCT +
Preference number: 6 (lower is better)
Translates to: RMLPSCAPCGNS*AASPWQCPHSS
Trigger: AGATGAATGGGGGCACTGCCAAGGAGAAGCTGCCCATGAGTTGCCACAAGGTGCGCAAGAAGGAAGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp AATCAGGCACTTCCTCCGTGTTTAGGCTCCAGCTTTTaGCGGGCCATGGAGTCTGTTTACTGGACCTCCCTG +
Preference number: 6 (lower is better)
Translates to: NQALPPCLGSSF*RAMESVYWTSL
Trigger: CAGGGAGGTCCAGTAAACAGACTCCATGGCCCGCCAAAAGCTGGAGCCTAAACACGGAGGAAGTGCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp TGCCTTTGTCACCGGAGTTCCGAGCATATTCCTCTATaGTCCAAGAAGGCTGGCCCCGCTTCACCTCAGCTA +
Preference number: 6 (lower is better)
Translates to: CLCHRSSEHIPL*SKKAGPASPQL
Trigger: TAGCTGAGGTGAAGCGGGGCCAGCCTTCTTGGACCATAGAGGAATATGCTCGGAACTCCGGTGACAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp CGGCAAGACTCAAAGGATGCTTCCTTCTTGCGCACCTaGTGGCAACTCATGGGCAGCTTCTCCTTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RQDSKDASFLRT*WQLMGSFSLAV
Trigger: CACTGCCAAGGAGAAGCTGCCCATGAGTTGCCACAAGGTGCGCAAGAAGGAAGCATCCTTTGAGTCTTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp AGGGCTTGCAGCCTATCCAGAGAGGCTGCCCGATTTTTCACCTCTTaGCTAACACCCAACAGGAAGTTGGGCTCAGAGGCAGGGACAAAC +
Preference number: 6 (lower is better)
Translates to: RACSLSREAARFFTS*LTPNRKLGSEAGTN
Trigger: GTTTGTCCCTGCCTCTGAGCCCAACTTCCTGTTGGGTGTTAGCAAAGAGGTGAAAAATCGGGCAGCCTCTCTGGATAGGCTGCAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp GCTGGGCCTGCATCTTTTATCTCCTCCTCGTTGAGGCTCATCCGGTaGGTGTATGTGATGGTTCGCCAGTCTCTGGGAGAGTTCGAGATG +
Preference number: 6 (lower is better)
Translates to: AGPASFISSSLRLIR*VYVMVRQSLGEFEM
Trigger: CATCTCGAACTCTCCCAGAGACTGGCGAACCATCACATACACCAACCGGATGAGCCTCAACGAGGAGGAGATAAAAGATGCAGGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp AAGCTGAGACAAGGAGCCGGTGCTGTTGTAGCAGGATaGCTGTATCACTCCTGTGGAGCCGCTGATGCTCAT +
Preference number: 6 (lower is better)
Translates to: KLRQGAGAVVAG*LYHSCGAADAH
Trigger: ATGAGCATCAGCGGCTCCACAGGAGTGATACAGTCATCCTGCTACAACAGCACCGGCTCCTTGTCTCAGCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp GACACGCAGGCTTTCACTGTTACTTCCACTGGCATCTaGGCAGCACCAGTCAGGACTGTTCTCCAGCTTAGG +
Preference number: 6 (lower is better)
Translates to: DTQAFTVTSTGI*AAPVRTVLQLR
Trigger: CCTAAGCTGGAGAACAGTCCTGACTGGTGCTGCTCAGATGCCAGTGGAAGTAACAGTGAAAGCCTGCGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 72 bp ATAGGGGGACAGGGCTTGCAGCCTATCCAGAGAGGCTaGCCGATTTTTCACCTCTTTGCTAACACCCAACAG +
Preference number: 6 (lower is better)
Translates to: IGGQGLQPIQRG*PIFHLFANTQQ
Trigger: CTGTTGGGTGTTAGCAAAGAGGTGAAAAATCGGGCAGCCTCTCTGGATAGGCTGCAAGCCCTGTCCCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp ATGGAGTCTGTTTACTGGACCTCCCTGGACAGCGCCTaGTATCTTGTGTTCCCATCACTGGAGTGGGTCCAA +
Preference number: 6 (lower is better)
Translates to: MESVYWTSLDSA*YLVFPSLEWVQ
Trigger: TTGGACCCACTCCAGTGATGGGAACACAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAACAGACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp TCTTGGGTCTGCAGGTCCAGAGCTGTCAGCTTGCCTTaGTCACCGGAGTTCCGAGCATATTCCTCTATGGTC +
Preference number: 6 (lower is better)
Translates to: SWVCRSRAVSLP*SPEFRAYSSMV
Trigger: GACCATAGAGGAATATGCTCGGAACTCCGGTGACAAAGGCAAGCTGACAGCTCTGGACCTGCAGACCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS CAA 90 bp CGCCCGCCTTTTGTCAGGGATGGGGGAATACACCGGATTCAGGTATaGGTTGTGGTAAGGCATCTCAAAGCTGTGGTTGAAGAAGGGTGG +
Preference number: 6 (lower is better)
Translates to: RPPFVRDGGIHRIQV*VVVRHLKAVVEEGW
Trigger: CCACCCTTCTTCAACCACAGCTTTGAGATGCCTTACCACAACCAATACCTGAATCCGGTGTATTCCCCCATCCCTGACAAAAGGCGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp CCATGGAGTCTGTTTACTGGACCTCCCTGGACAGCGCCTGGTATCTaGTGTTCCCATCACTGGAGTGGGTCCAAAATAGGTAGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: PWSLFTGPPWTAPGI*CSHHWSGSKIGRGL
Trigger: CAAGCCTCTACCTATTTTGGACCCACTCCAGTGATGGGAACACAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAACAGACTCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp CCGGAAAATGTCACTGATGTCGTCGCTGACGATTTCTaGGTCATCGTCCGACTGCTTCATGGCATGCCTGTC +
Preference number: 6 (lower is better)
Translates to: PENVTDVVADDF*VIVRLLHGMPV
Trigger: GACAGGCATGCCATGAAGCAGTCGGACGATGACTCAGAAATCGTCAGCGACGACATCAGTGACATTTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp TTTGGCGAGGTGGTGCTCTGGCGAACTATCACAGTCTaGCTTATGAAGCTGAGACAAGGAGCCGGTGCTGTT +
Preference number: 6 (lower is better)
Translates to: FGEVVLWRTITV*LMKLRQGAGAV
Trigger: AACAGCACCGGCTCCTTGTCTCAGCTTCATAAGTCAGACTGTGATAGTTCGCCAGAGCACCACCTCGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp AGTTTGCACACGCTACTCTTCAACTCTTCCTCGGAGTaGTGGACGTTTTCAGGCCGGTTACACTTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: SLHTLLFNSSSE*WTFSGRLHLSP
Trigger: GGGGGACAAGTGTAACCGGCCTGAAAACGTCCATCACTCCGAGGAAGAGTTGAAGAGTAGCGTGTGCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 72 bp GATGCCTGTCTGGGCCTGAGAAATTGGGAGTCTGGCTaGCAGAATTTGGATAGCGTAGCTTCTCTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: DACLGLRNWESG*QNLDSVASLQR
Trigger: CCTCTGAAGAGAAGCTACGCTATCCAAATTCTGGCAGCCAGACTCCCAATTTCTCAGGCCCAGACAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp CAACAGGAAGTTGGGCTCAGAGGCAGGGACAAACTGTaGGCATTCCTTACAGTCCATCTTCCGGCATTTGGA +
Preference number: 6 (lower is better)
Translates to: QQEVGLRGRDKL*AFLTVHLPAFG
Trigger: TCCAAATGCCGGAAGATGGACTGTAAGGAATGCCCACAGTTTGTCCCTGCCTCTGAGCCCAACTTCCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp CGTCCGACTGCTTCATGGCATGCCTGTCACCGTACTTaGCCTGACCCGAAGTACACAAATCTTTGCATTTGG +
Preference number: 6 (lower is better)
Translates to: RPTASWHACHRT*PDPKYTNLCIW
Trigger: CCAAATGCAAAGATTTGTGTACTTCGGGTCAGGCCAAGTACGGTGACAGGCATGCCATGAAGCAGTCGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp CTGTTTACTGGACCTCCCTGGACAGCGCCTGGTATCTaGTGTTCCCATCACTGGAGTGGGTCCAAAATAGGT +
Preference number: 6 (lower is better)
Translates to: LFTGPPWTAPGI*CSHHWSGSKIG
Trigger: ACCTATTTTGGACCCACTCCAGTGATGGGAACACAAGATACCAGGCGCTGTCCAGGGAGGTCCAGTAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp GTCTCTTTGATGCCTTGGCTGATGGGCAGAGAGTCCTaGTCTGACATGGGCTCGTTCTCAATATTCATGGGG +
Preference number: 6 (lower is better)
Translates to: VSLMPWLMGRES*SDMGSFSIFMG
Trigger: CCCCATGAATATTGAGAACGAGCCCATGTCAGATCAGGACTCTCTGCCCATCAGCCAAGGCATCAAAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 72 bp CACAGTCTGACTTATGAAGCTGAGACAAGGAGCCGGTaGTGTTGTAGCAGGATGACTGTATCACTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: HSLTYEAETRSR*CCSRMTVSLLW
Trigger: CCACAGGAGTGATACAGTCATCCTGCTACAACAGCACCGGCTCCTTGTCTCAGCTTCATAAGTCAGACTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp ATGGGCAGCTTCTCCTTGGCAGTGCCCCCATTCATCTaGATCAGGTTGAAGATTGTTACGATATCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: MGSFSLAVPPFI*IRLKIVTISAA
Trigger: GGCAGCAGATATCGTAACAATCTTCAACCTGATCCAGATGAATGGGGGCACTGCCAAGGAGAAGCTGCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp CTAAGCTTTCATGCTTCGCCCGCCTTTTGTCAGGGATaGGGGAATACACCGGATTCAGGTATTGGTTGTGGT +
Preference number: 6 (lower is better)
Translates to: LSFHASPAFCQG*GNTPDSGIGCG
Trigger: ACCACAACCAATACCTGAATCCGGTGTATTCCCCCATCCCTGACAAAAGGCGGGCGAAGCATGAAAGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp AAAGATTCTTGGGTCTGCAGGTCCAGAGCTGTCAGCTaGCCTTTGTCACCGGAGTTCCGAGCATATTCCTCT +
Preference number: 6 (lower is better)
Translates to: KDSWVCRSRAVS*PLSPEFRAYSS
Trigger: AGAGGAATATGCTCGGAACTCCGGTGACAAAGGCAAGCTGACAGCTCTGGACCTGCAGACCCAAGAATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS CAA 90 bp TTGGTTTCACTGCATAGCCAGCAGGGAGAACCTTCTGTTGATCCTTaGGCACCAAGTAAACTGGATGCCTGTCTGGGCCTGAGAAATTGG +
Preference number: 6 (lower is better)
Translates to: LVSLHSQQGEPSVDP*APSKLDACLGLRNW
Trigger: CCAATTTCTCAGGCCCAGACAGGCATCCAGTTTACTTGGTGCCAAAGGATCAACAGAAGGTTCTCCCTGCTGGCTATGCAGTGAAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp TTTAAAGATTCTTGGGTCTGCAGGTCCAGAGCTGTCAGCTTGCCTTaGTCACCGGAGTTCCGAGCATATTCCTCTATGGTCCAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: FKDSWVCRSRAVSLP*SPEFRAYSSMVQEG
Trigger: GCCTTCTTGGACCATAGAGGAATATGCTCGGAACTCCGGTGACAAAGGCAAGCTGACAGCTCTGGACCTGCAGACCCAAGAATCTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS TCA 72 bp CTTTGGCACCAAGTAAACTGGATGCCTGTCTGGGCCTaGGAAATTGGGAGTCTGGCTGCCAGAATTTGGATA +
Preference number: 6 (lower is better)
Translates to: LWHQVNWMPVWA*EIGSLAARIWI
Trigger: TATCCAAATTCTGGCAGCCAGACTCCCAATTTCTCAGGCCCAGACAGGCATCCAGTTTACTTGGTGCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp TGTAGCAGGATGACTGTATCACTCCTGTGGAGCCGCTaGTGCTCATGTCATCGAGAAACCGGAAAATGTCAC +
Preference number: 6 (lower is better)
Translates to: CSRMTVSLLWSR*CSCHRETGKCH
Trigger: GTGACATTTTCCGGTTTCTCGATGACATGAGCATCAGCGGCTCCACAGGAGTGATACAGTCATCCTGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp AGTCCTGATCTGACATGGGCTCGTTCTCAATATTCATaGGGAAATAGGTCCTCTGCATCTCACAGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SPDLTWARSQYS*GNRSSASHRAE
Trigger: CTCAGCCCTGTGAGATGCAGAGGACCTATTTCCCCATGAATATTGAGAACGAGCCCATGTCAGATCAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp CTACTGGTGTCTGAGCTGTGCTGCCCACTGGTGCAGCTGATGCTTTaGTCTTTAAACTTCTTGACTGCTTCGTGCTTCTCTAGGTCAACA +
Preference number: 6 (lower is better)
Translates to: LLVSELCCPLVQLML*SLNFLTASCFSRST
Trigger: TGTTGACCTAGAGAAGCACGAAGCAGTCAAGAAGTTTAAAGACAAAAGCATCAGCTGCACCAGTGGGCAGCACAGCTCAGACACCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp TACTGCCTGTCTGCCTCCTTAGATTTCCGATGCCAATCTTTGTTATaGGCTGGGCCTGCATCTTTTATCTCCTCCTCGTTGAGGCTCATC +
Preference number: 6 (lower is better)
Translates to: YCLSASLDFRCQSLL*AGPASFISSSLRLI
Trigger: GATGAGCCTCAACGAGGAGGAGATAAAAGATGCAGGCCCAGCCAATAACAAAGATTGGCATCGGAAATCTAAGGAGGCAGACAGGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp TTTGGGTTTAAAGATTCTTGGGTCTGCAGGTCCAGAGCTGTCAGCTaGCCTTTGTCACCGGAGTTCCGAGCATATTCCTCTATGGTCCAA +
Preference number: 6 (lower is better)
Translates to: FGFKDSWVCRSRAVS*PLSPEFRAYSSMVQ
Trigger: TTGGACCATAGAGGAATATGCTCGGAACTCCGGTGACAAAGGCAAGCTGACAGCTCTGGACCTGCAGACCCAAGAATCTTTAAACCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS TCA 72 bp ACAGCGATTCCAGCTTCCGCTCTATCTCACCAATCCTaGGAACCAGTTTGCACACGCTACTCTTCAACTCTT +
Preference number: 6 (lower is better)
Translates to: TAIPASALSHQS*EPVCTRYSSTL
Trigger: AAGAGTTGAAGAGTAGCGTGTGCAAACTGGTTCTCAGGATTGGTGAGATAGAGCGGAAGCTGGAATCGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp AACAGGGGACGAGATCTCTTTCGATTTGAGTCCATTTaGTTTCACTGCATAGCCAGCAGGGAGAACCTTCTG +
Preference number: 6 (lower is better)
Translates to: NRGRDLFRFESI*FHCIASRENLL
Trigger: CAGAAGGTTCTCCCTGCTGGCTATGCAGTGAAACCAAATGGACTCAAATCGAAAGAGATCTCGTCCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp CTGGGCCTGAGAAATTGGGAGTCTGGCTGCCAGAATTaGGATAGCGTAGCTTCTCTTCAGAGGGATTTCTAT +
Preference number: 6 (lower is better)
Translates to: LGLRNWESGCQN*DSVASLQRDFY
Trigger: ATAGAAATCCCTCTGAAGAGAAGCTACGCTATCCAAATTCTGGCAGCCAGACTCCCAATTTCTCAGGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp GAAGATGGCCTGGTAAAGAGGCTTTTCTTTAAGGCCTaGACACGCAGGCTTTCACTGTTACTTCCACTGGCA +
Preference number: 6 (lower is better)
Translates to: EDGLVKRLFFKA*TRRLSLLLPLA
Trigger: TGCCAGTGGAAGTAACAGTGAAAGCCTGCGTGTCAAGGCCTTAAAGAAAAGCCTCTTTACCAGGCCATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp TGCCTGTCTGCCTCCTTAGATTTCCGATGCCAATCTTaGTTATTGGCTGGGCCTGCATCTTTTATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: CLSASLDFRCQS*LLAGPASFISS
Trigger: GGAGGAGATAAAAGATGCAGGCCCAGCCAATAACAAAGATTGGCATCGGAAATCTAAGGAGGCAGACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp ATGGGCAGCTTCTCCTTGGCAGTGCCCCCATTCATCTGGATCAGGTaGAAGATTGTTACGATATCTGCTGCCACCATGATTTTCTTTGAC +
Preference number: 6 (lower is better)
Translates to: MGSFSLAVPPFIWIR*KIVTISAATMIFFD
Trigger: GTCAAAGAAAATCATGGTGGCAGCAGATATCGTAACAATCTTCAACCTGATCCAGATGAATGGGGGCACTGCCAAGGAGAAGCTGCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp ATGTCATACTGCCTGTCTGCCTCCTTAGATTTCCGATGCCAATCTTaGTTATTGGCTGGGCCTGCATCTTTTATCTCCTCCTCGTTGAGG +
Preference number: 6 (lower is better)
Translates to: MSYCLSASLDFRCQS*LLAGPASFISSSLR
Trigger: CCTCAACGAGGAGGAGATAAAAGATGCAGGCCCAGCCAATAACAAAGATTGGCATCGGAAATCTAAGGAGGCAGACAGGCAGTATGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp TTTGATGCCTTGGCTGATGGGCAGAGAGTCCTGATCTaGCATGGGCTCGTTCTCAATATTCATGGGGAAATA +
Preference number: 6 (lower is better)
Translates to: FDALADGQRVLI*HGLVLNIHGEI
Trigger: TATTTCCCCATGAATATTGAGAACGAGCCCATGTCAGATCAGGACTCTCTGCCCATCAGCCAAGGCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp CTTTCTCCGGCTGCTGTATTTTCTGATCCAGTTTATTaGGTTTCCCAAGGACCTGGGAGATTTCCTCTCGGA +
Preference number: 6 (lower is better)
Translates to: LSPAAVFSDPVY*VSQGPGRFPLG
Trigger: TCCGAGAGGAAATCTCCCAGGTCCTTGGGAAACTCAATAAACTGGATCAGAAAATACAGCAGCCGGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CCA 72 bp CTCCTTAGATTTCCGATGCCAATCTTTGTTATTGGCTaGGCCTGCATCTTTTATCTCCTCCTCGTTGAGGCT +
Preference number: 6 (lower is better)
Translates to: LLRFPMPIFVIG*ACIFYLLLVEA
Trigger: AGCCTCAACGAGGAGGAGATAAAAGATGCAGGCCCAGCCAATAACAAAGATTGGCATCGGAAATCTAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp TTCTCCTTGGCAGTGCCCCCATTCATCTGGATCAGGTaGAAGATTGTTACGATATCTGCTGCCACCATGATT +
Preference number: 6 (lower is better)
Translates to: FSLAVPPFIWIR*KIVTISAATMI
Trigger: AATCATGGTGGCAGCAGATATCGTAACAATCTTCAACCTGATCCAGATGAATGGGGGCACTGCCAAGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 72 bp TTTGTCAGGGATGGGGGAATACACCGGATTCAGGTATaGGTTGTGGTAAGGCATCTCAAAGCTGTGGTTGAA +
Preference number: 6 (lower is better)
Translates to: FVRDGGIHRIQV*VVVRHLKAVVE
Trigger: TTCAACCACAGCTTTGAGATGCCTTACCACAACCAATACCTGAATCCGGTGTATTCCCCCATCCCTGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp TTGGATAGCGTAGCTTCTCTTCAGAGGGATTTCTATTaGAAAAGGAGCGTTCGAAATCAGGCACTTCCTCCG +
Preference number: 6 (lower is better)
Translates to: LDSVASLQRDFY*KRSVRNQALPP
Trigger: CGGAGGAAGTGCCTGATTTCGAACGCTCCTTTTTCAATAGAAATCCCTCTGAAGAGAAGCTACGCTATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS GCA 72 bp CGAGATCTCTTTCGATTTGAGTCCATTTGGTTTCACTaGATAGCCAGCAGGGAGAACCTTCTGTTGATCCTT +
Preference number: 6 (lower is better)
Translates to: RDLFRFESIWFH*IASRENLLLIL
Trigger: AAGGATCAACAGAAGGTTCTCCCTGCTGGCTATGCAGTGAAACCAAATGGACTCAAATCGAAAGAGATCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS TCA 72 bp TTTGGCAAGCTGAGACAGATCAAACTGGGCACAGAGTaGCTTGCACAGGTCTTGATAGGAAACAGTATTTTG +
Preference number: 6 (lower is better)
Translates to: FGKLRQIKLGTE*LAQVLIGNSIL
Trigger: CAAAATACTGTTTCCTATCAAGACCTGTGCAAGTCACTCTGTGCCCAGTTTGATCTGTCTCAGCTTGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2
CDS CAA 90 bp CATAGCCTGGAGTATAAATATCTTCCATCCAGTACTCTAAGTTGTTaGGGTTTAAAGATTCTTGGGTCTGCAGGTCCAGAGCTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: HSLEYKYLPSSTLSC*GLKILGSAGPELSA
Trigger: AGCTGACAGCTCTGGACCTGCAGACCCAAGAATCTTTAAACCCAAACAACTTAGAGTACTGGATGGAAGATATTTATACTCCAGGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044491.13
CDS GCA 72 bp CAAGCTGAGACAGATCAAACTGGGCACAGAGTGACTTaGACAGGTCTTGATAGGAAACAGTATTTTGTTTAC +
Preference number: 6 (lower is better)
Translates to: QAETDQTGHRVT*TGLDRKQYFVY
Trigger: GTAAACAAAATACTGTTTCCTATCAAGACCTGTGCAAGTCACTCTGTGCCCAGTTTGATCTGTCTCAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044491.13
ENSMUST00000191465.2