Pregenerated sensors for MILL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040987Ensembl transcript IDs: ENSMUST00000072386.11, ENSMUST00000072415.9, ENSMUST00000206487.3, ENSMUST00000227379.2, ENSMUST00000228493.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCAGAAGCTCACAGCCCAAAGTTGCCTGGAGAGTGTGAAGGCCTaGCCCGCCCCAGGCAGGAACTCGTTACCTTCTTGTCCCTGGACC | + |
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Preference number: 1 (lower is better) Translates to: TQKLTAQSCLESVKA*PAPGRNSLPSCPWT Trigger: GGTCCAGGGACAAGAAGGTAACGAGTTCCTGCCTGGGGCGGGCCAGGCCTTCACACTCTCCAGGCAACTTTGGGCTGTGAGCTTCTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR TCA 90 bp | CTCCCATTACTCAGAAGCTCACAGCCCAAAGTTGCCTGGAGAGTGTaGAGGCCTGGCCCGCCCCAGGCAGGAACTCGTTACCTTCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: LPLLRSSQPKVAWRV*RPGPPQAGTRYLLV Trigger: GACAAGAAGGTAACGAGTTCCTGCCTGGGGCGGGCCAGGCCTTCACACTCTCCAGGCAACTTTGGGCTGTGAGCTTCTGAGTAATGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CCA 90 bp | CCCGCTGGGCAGGATGGTCTCAGATCTGAAGGTTTTCTGCTGTACTaGCTTCCCATCCTGAAGCCAGACCAGGGTGGCCTCACGGGTATA | + |
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Preference number: 1 (lower is better) Translates to: PAGQDGLRSEGFLLY*LPILKPDQGGLTGI Trigger: TATACCCGTGAGGCCACCCTGGTCTGGCTTCAGGATGGGAAGCCAGTACAGCAGAAAACCTTCAGATCTGAGACCATCCTGCCCAGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CCA 90 bp | ACTATCTCTGTTCATCAAGGCCCTCTGCGCTTACTCTTGCCTGCGTaGAAACCTCTCTCCCTCAGCCCTCTCTCCTATAACCCTGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: TISVHQGPLRLLLPA*KPLSLSPLSYNPGG Trigger: GCCCCCAGGGTTATAGGAGAGAGGGCTGAGGGAGAGAGGTTTCCACGCAGGCAAGAGTAAGCGCAGAGGGCCTTGATGAACAGAGATAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR GCA 90 bp | GCAGCATGCCCAGAGACAGCTGTCTGCATGATGCTATGGTTGCCATaGCTCAGGTTGCAGCTGAACTGTGGTTCCTGTCCAGGAAGAACC | + |
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Preference number: 1 (lower is better) Translates to: AACPETAVCMMLWLP*LRLQLNCGSCPGRT Trigger: GGTTCTTCCTGGACAGGAACCACAGTTCAGCTGCAACCTGAGGCATGGCAACCATAGCATCATGCAGACAGCTGTCTCTGGGCATGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR GCA 90 bp | ACTAGATCAGCTCTGGGTGCATGTGTCTTCCAGAACATCTTGTTCTaGTGGGTGGAGGGTCCATCCACTGTCCACGTGAGAGTCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: TRSALGACVFQNILF*WVEGPSTVHVRVFW Trigger: CCAGAAGACTCTCACGTGGACAGTGGATGGACCCTCCACCCAGCAGAACAAGATGTTCTGGAAGACACATGCACCCAGAGCTGATCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CCA 90 bp | ATAGCGCAGAGTGTGGGTTCCTTGGAGAGGCACAGCCTTGGTGTGTaGTGGTGGTTTGTCTCTGGATTGCTTCTTGCTGATGCTAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: IAQSVGSLERHSLGV*WWFVSGLLLADASP Trigger: AGGACTAGCATCAGCAAGAAGCAATCCAGAGACAAACCACCACCACACACCAAGGCTGTGCCTCTCCAAGGAACCCACACTCTGCGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CCA 90 bp | AGATCAGCTCTGGGTGCATGTGTCTTCCAGAACATCTTGTTCTGCTaGGTGGAGGGTCCATCCACTGTCCACGTGAGAGTCTTCTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: RSALGACVFQNILFC*VEGPSTVHVRVFWS Trigger: TGACCAGAAGACTCTCACGTGGACAGTGGATGGACCCTCCACCCAGCAGAACAAGATGTTCTGGAAGACACATGCACCCAGAGCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CCA 90 bp | CAAGTGGATACAGACTGGTCCTGTCCTTTGTGTTCTGGATTCAGTTaGCTCTGGCCAGTGCCACCGCCAATACAACAGGGAGTGCAGATC | + |
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Preference number: 1 (lower is better) Translates to: QVDTDWSCPLCSGFS*LWPVPPPIQQGVQI Trigger: GATCTGCACTCCCTGTTGTATTGGCGGTGGCACTGGCCAGAGCCAACTGAATCCAGAACACAAAGGACAGGACCAGTCTGTATCCACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR GCA 90 bp | AACCATAGACTATCTCTGTTCATCAAGGCCCTCTGCGCTTACTCTTaGCTGCGTGGAAACCTCTCTCCCTCAGCCCTCTCTCCTATAACC | + |
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Preference number: 1 (lower is better) Translates to: NHRLSLFIKALCAYS*LRGNLSPSALSPIT Trigger: GGTTATAGGAGAGAGGGCTGAGGGAGAGAGGTTTCCACGCAGGCAAGAGTAAGCGCAGAGGGCCTTGATGAACAGAGATAGTCTATGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR TCA 90 bp | ATGGTCTCAGATCTGAAGGTTTTCTGCTGTACTGGCTTCCCATCCTaGAGCCAGACCAGGGTGGCCTCACGGGTATACAGATTAAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: MVSDLKVFCCTGFPS*SQTRVASRVYRLKA Trigger: GGCTTTTAATCTGTATACCCGTGAGGCCACCCTGGTCTGGCTTCAGGATGGGAAGCCAGTACAGCAGAAAACCTTCAGATCTGAGACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR TCA 90 bp | CCCTCCAAACATCATGTGTCCTCCAATGGGTTTTGCTTCAGCACGTaGGTCTGTCTTAGCAAAACTCCACATGAGACTGTATCAGCCGAC | + |
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Preference number: 1 (lower is better) Translates to: PSKHHVSSNGFCFST*VCLSKTPHETVSAD Trigger: GTCGGCTGATACAGTCTCATGTGGAGTTTTGCTAAGACAGACTCACGTGCTGAAGCAAAACCCATTGGAGGACACATGATGTTTGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| 3UTR GCA 90 bp | CTCCCAGTTACAGTAAAGATAACAGCACACCACCATAAGAGGGGCTaGTTGGCCCCACCTCATTCTCTTACTCCTCTTACTCTCCTTACT | + |
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Preference number: 1 (lower is better) Translates to: LPVTVKITAHHHKRG*LAPPHSLTPLTLLT Trigger: AGTAAGGAGAGTAAGAGGAGTAAGAGAATGAGGTGGGGCCAAGCAGCCCCTCTTATGGTGGTGTGCTGTTATCTTTACTGTAACTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CCA 90 bp | ACAGTTGATATCCGGATTGCATTTATTATCCAAGTGGATACAGACTaGTCCTGTCCTTTGTGTTCTGGATTCAGTTGGCTCTGGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: TVDIRIAFIIQVDTD*SCPLCSGFSWLWPV Trigger: CACTGGCCAGAGCCAACTGAATCCAGAACACAAAGGACAGGACCAGTCTGTATCCACTTGGATAATAAATGCAATCCGGATATCAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR GCA 90 bp | TTATTCTTAAAATCATCCTCTTTGTTCTGTATAGAGCAGGTGGAGTaGTGTGGGGCATTGGGCTATACACAGACAATCTGGTCTCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: LFLKSSSLFCIEQVE*CGALGYTQTIWSPV Trigger: GACTGGAGACCAGATTGTCTGTGTATAGCCCAATGCCCCACAGCACTCCACCTGCTCTATACAGAACAAAGAGGATGATTTTAAGAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR TCA 90 bp | ATCCTTATGTTCAATCCCTGGGCGTTGGGTGTTTACTCCACCTCTTaGCTTAGGGTTCCTCTTGACCTATCATTGACTTTATTTAATCCT | + |
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Preference number: 1 (lower is better) Translates to: ILMFNPWALGVYSTS*LRVPLDLSLTLFNP Trigger: AGGATTAAATAAAGTCAATGATAGGTCAAGAGGAACCCTAAGTCAAGAGGTGGAGTAAACACCCAACGCCCAGGGATTGAACATAAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CCA 90 bp | CCACCAGAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTaGACTTGTTTAGAAATTGTTCTTTGGAGCAAATCCCATCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PPEVVEKKVIRIQGK*TCLEIVLWSKSHLH Trigger: ATGCAGATGGGATTTGCTCCAAAGAACAATTTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTCTGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| 3UTR TCA 90 bp | GTTCTTTGGAGCAAATCCCATCTGCATTGTCAGGAAATTAGCACATaGGTCAACAGAGCTCGATACACTCATAAACACTTCACGAATATA | + |
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Preference number: 1 (lower is better) Translates to: VLWSKSHLHCQEIST*VNRARYTHKHFTNI Trigger: TATATTCGTGAAGTGTTTATGAGTGTATCGAGCTCTGTTGACTCATGTGCTAATTTCCTGACAATGCAGATGGGATTTGCTCCAAAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| 3UTR-3UTR CCA 90 bp | CGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGGAGAGTGTGAAGGCCTaGCCCGCCCCAGGCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: RHHSANRPESAEAARSHQESVKA*PAPGRN Trigger: GTTCCTGCCTGGGGCGGGCCAGGCCTTCACACTCTC...CTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR TCA 90 bp | CGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGACTGGCTTCCCATCCTaGAGCCAGACCAGGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RHHSANRPESAEAARSHQTGFPS*SQTRVA Trigger: GGCCACCCTGGTCTGGCTTCAGGATGGGAAGCCAGT...CTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTTACTATCTAGCCTTCCCCCTCTCCCGCTCCCCTCCTCTTGGCCATGGCTGCAGCCATCATCCCCCTaGGTTTCTCTTCCACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: FLLSSLPPLPLPSSWPWLQPSSP*VSLPPS Trigger: TGAAGGTGGAAGAGAAACTCAGGGGGATGATGGCTG...CAGCCATGGCCAAGAGGAGGGGAGCGGGAGAGGGGGAAGGCTAGATAGTAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 90 bp | TCCTCAGCAGCATGCCCAGAGACAGCTGTCTGCATGATGCTATGGTaGCCATGCCTCAGGTTGCAGCTGAACTGTGGTTCCTGTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSAACPETAVCMMLW*PCLRLQLNCGSCPG Trigger: TCCTGGACAGGAACCACAGTTCAGCTGCAACCTGAGGCATGGCAACCATAGCATCATGCAGACAGCTGTCTCTGGGCATGCTGCTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR CCA 90 bp | CGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGCACAGCCTTGGTGTGTaGTGGTGGTTTGTCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RHHSANRPESAEAARSHQHSLGV*WWFVSG Trigger: TCCAGAGACAAACCACCACCACACACCAAGGCTGTG...CTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 90 bp | CCAGAGACAGCTGTCTGCATGATGCTATGGTTGCCATGCCTCAGGTaGCAGCTGAACTGTGGTTCCTGTCCAGGAAGAACCCGAATGGAC | + |
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Preference number: 2 (lower is better) Translates to: PETAVCMMLWLPCLR*QLNCGSCPGRTRMD Trigger: GTCCATTCGGGTTCTTCCTGGACAGGAACCACAGTTCAGCTGCAACCTGAGGCATGGCAACCATAGCATCATGCAGACAGCTGTCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGCTGGAGAAATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCGGAGAGGGCTCTGTCTCCCTaGTGTCTCCATTGTATTTCA | + |
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Preference number: 2 (lower is better) Translates to: PGAGEMAQRLRALTALPERALSP*CLHCIS Trigger: TGAAATACAATGGAGACAGCAGGGAGACAGAGCCCT...CTCCGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATTTCTCCAGCCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGCTGGAGAAATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCGGAGCCTGGGGCTAGCATGTaGAGATCACTTTTGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: PGAGEMAQRLRALTALPEPGASM*RSLLKQ Trigger: CTGTTTCAAAAGTGATCTGCACATGCTAGCCCCAGG...CTCCGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATTTCTCCAGCCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR CCA 90 bp | CACCATAAGAGGGGCTGCTTGGCCCCACCTCATTCTCTTACTCCTCTTACTCTCTGTTCTGGATTCAGTTaGCTCTGGCCAGTGCCACCG | + |
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Preference number: 2 (lower is better) Translates to: HHKRGCLAPPHSLTPLTLCSGFS*LWPVPP Trigger: CGGTGGCACTGGCCAGAGCCAACTGAATCCAGAACA...GAGAGTAAGAGGAGTAAGAGAATGAGGTGGGGCCAAGCAGCCCCTCTTATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR CCA 90 bp | ATCAGTCAGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCATGTGTCCTCCAATaGGTTTTGCTTCAGCACGTG | + |
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Preference number: 2 (lower is better) Translates to: ISQQEQPGPAGAPEVLCASCVLQ*VLLQHV Trigger: CACGTGCTGAAGCAAAACCCATTGGAGGACACATGA...GGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCTGACTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| 3UTR CAA 90 bp | CCAAGTGGATACAGACTGGTCCTGTCCTTTGTGTTCTGGATTCAGTaGGCTCTGGCCAGTGCCACCGCCAATACAACAGGGAGTGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: PSGYRLVLSFVFWIQ*ALASATANTTGSAD Trigger: ATCTGCACTCCCTGTTGTATTGGCGGTGGCACTGGCCAGAGCCAACTGAATCCAGAACACAAAGGACAGGACCAGTCTGTATCCACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR GCA 90 bp | ATCAGTCAGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCGGTTTGTCTCTGGATTaGTTCTTGCTGATGCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: ISQQEQPGPAGAPEVLCAGLSLD*FLLMLV Trigger: GACTAGCATCAGCAAGAAGCAATCCAGAGACAAACC...GGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCTGACTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 90 bp | GTCTTAACTAGATCAGCTCTGGGTGCATGTGTCTTCCAGAACATCTaGTTCTGCTGGGTGGAGGGTCCATCCACTGTCCACGTGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: VLTRSALGACVFQNI*FCWVEGPSTVHVRV Trigger: GACTCTCACGTGGACAGTGGATGGACCCTCCACCCAGCAGAACAAGATGTTCTGGAAGACACATGCACCCAGAGCTGATCTAGTTAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCACCACCCACCAGAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGGTATCTAGCATGGTGTaGATGGGCACAGGGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: AHHPPEVVEKKVIRIQGKVSSMV*MGTGRP Trigger: GGGTCTCCCTGTGCCCATTCACACCATGCTAGATAC...CTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTCTGGTGGGTGGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGTAAGGCGTACCAATACCATCCAGCATTGTCCACTGTCTGCTGGGTCCTTCGTCTCATTTCCCCCATaGCCCTTAATCCAGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: MVRRTNTIQHCPLSAGSFVSFPP*PLIQHP Trigger: GGGATGCTGGATTAAGGGCCATGGGGGAAATGAGAC...GAAGGACCCAGCAGACAGTGGACAATGCTGGATGGTATTGGTACGCCTTACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTTTTTCTATGGAGTCCTaGTCCTGTCCTTTGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SQQEQPGPAGAPEVLCASFSMES*SCPLCS Trigger: AGAACACAAAGGACAGGACCAGGACTCCATAGAAAA...AGAGGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCACCACCCACCAGAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGAGACAGCTGTCTGCATaGTGCTATGGTTGCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: AHHPPEVVEKKVIRIQGKRQLSA*CYGCHA Trigger: GGCATGGCAACCATAGCATCATGCAGACAGCTGTCT...CTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTCTGGTGGGTGGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAAACAGCCAAGCCTCAGTCAAATTAGCATCAGTCAGCAGGAGCAACCAGCTCCTGTATCTAGCATaGTGTGAATGGGCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GRNSQASVKLASVSRSNQLLYLA*CEWAQG Trigger: TCCCTGTGCCCATTCACACCATGCTAGATACAGGAG...CTGGTTGCTCCTGCTGACTGATGCTAATTTGACTGAGGCTTGGCTGTTTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGTAAGGCGTACCAATACCATCCAGCATTGTCCACTGTCTGCTGGGTCCTTCAGCCTTGGTGTGTGGTaGTGGTTTGTCTCTGGATTG | + |
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Preference number: 2 (lower is better) Translates to: MVRRTNTIQHCPLSAGSFSLGVW*WFVSGL Trigger: CAATCCAGAGACAAACCACCACCACACACCAAGGCT...GAAGGACCCAGCAGACAGTGGACAATGCTGGATGGTATTGGTACGCCTTACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 90 bp | GGCACAGCCTTGGTGTGTGGTGGTGGTTTGTCTCTGGATTGCTTCTaGCTGATGCTAGTCCTTCTCATGTTGGCCATTGCTATATTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GTALVCGGGLSLDCF*LMLVLLMLAIAIFL Trigger: GAGGAATATAGCAATGGCCAACATGAGAAGGACTAGCATCAGCAAGAAGCAATCCAGAGACAAACCACCACCACACACCAAGGCTGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 90 bp | TCTTCCCTCCTTAAGATGGAGTCTGGCTGGCCCATCATTTCTGCCTaGCCTTGTGTGCCCCTTTCAAATCCTTGCCAGGGAATGATCATT | + |
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Preference number: 2 (lower is better) Translates to: SSLLKMESGWPIISA*PCVPLSNPCQGMII Trigger: AATGATCATTCCCTGGCAAGGATTTGAAAGGGGCACACAAGGCAAGGCAGAAATGATGGGCCAGCCAGACTCCATCTTAAGGAGGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR TCA 90 bp | TCCGGAGGTCTTGAGTTCTATTCCCAGCAACCACATGCTGTCTTAAATACCCTTCCCGGCATGTCAGTGTaGCCCTACCTACTGGATAGT | + |
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Preference number: 2 (lower is better) Translates to: SGGLEFYSQQPHAVLNTLPGMSV*PYLLDS Trigger: ACTATCCAGTAGGTAGGGTCACACTGACATGCCGGG...AAGGGTATTTAAGACAGCATGTGGTTGCTGGGAATAGAACTCAAGACCTCCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR GCA 90 bp | CACCATAAGAGGGGCTGCTTGGCCCCACCTCATTCTCTTACTCCTCTTACTCTCCTACTGGATAGTTCCTaGAGGTCACAGTTACCATTG | + |
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Preference number: 2 (lower is better) Translates to: HHKRGCLAPPHSLTPLTLLLDSS*RSQLPL Trigger: CAATGGTAACTGTGACCTGCAGGAACTATCCAGTAG...GAGAGTAAGAGGAGTAAGAGAATGAGGTGGGGCCAAGCAGCCCCTCTTATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTAGGGCTGAGCCACAGCACAACAAGGTTTTTCTAGTTCACAATCTTGGGCTTCCCTCCTTAAGATaGAGTCTGGCTGGCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: CPRAEPQHNKVFLVHNLGLPSLR*SLAGPS Trigger: TGATGGGCCAGCCAGACTCCATCTTAAGGAGGGAAG...CCCAAGATTGTGAACTAGAAAAACCTTGTTGTGCTGTGGCTCAGCCCTAGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 90 bp | CCCTTAATCCAGCATCCCAAGGGCTCTGTCTCCCTGCTGTCTCCATaGTATTTCAGGAAGAGCTCTTCATCTACGTATATTAGGACCAGG | + |
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Preference number: 2 (lower is better) Translates to: PLIQHPKGSVSLLSP*YFRKSSSSTYIRTR Trigger: CCTGGTCCTAATATACGTAGATGAAGAGCTCTTCCTGAAATACAATGGAGACAGCAGGGAGACAGAGCCCTTGGGATGCTGGATTAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 90 bp | CGGATTGCATTTATTATCCAAGTGGATACAGACTGGTCCTGTCCTTaGTGTTCTGGATTCAGTTGGCTCTGGCCAGTGCCACCGCCAATA | + |
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Preference number: 2 (lower is better) Translates to: RIAFIIQVDTDWSCP*CSGFSWLWPVPPPI Trigger: TATTGGCGGTGGCACTGGCCAGAGCCAACTGAATCCAGAACACAAAGGACAGGACCAGTCTGTATCCACTTGGATAATAAATGCAATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 90 bp | CCAGTTACAGTAAAGATAACAGCACACCACCATAAGAGGGGCTGCTaGGCCCCACCTCATTCTCTTACTCCTCTTACTCTCCTTACTCTC | + |
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Preference number: 2 (lower is better) Translates to: PVTVKITAHHHKRGC*APPHSLTPLTLLTL Trigger: GAGAGTAAGGAGAGTAAGAGGAGTAAGAGAATGAGGTGGGGCCAAGCAGCCCCTCTTATGGTGGTGTGCTGTTATCTTTACTGTAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTAGGGCTGAGCCACAGCACAACAAGGTTTTTCTAGTTCACAATCTTGGGATGCTATGGTTGCCATaGCTCAGGTTGCAGCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: CPRAEPQHNKVFLVHNLGMLWLP*LRLQLN Trigger: GTTCAGCTGCAACCTGAGGCATGGCAACCATAGCAT...CCCAAGATTGTGAACTAGAAAAACCTTGTTGTGCTGTGGCTCAGCCCTAGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR TCA 90 bp | CACCATAAGAGGGGCTGCTTGGCCCCACCTCATTCTCTTACTCCTCTTACTCTCTGTGCAGATCACTTTTaGAACAGTTTACAGTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: HHKRGCLAPPHSLTPLTLCADHF*NSLQST Trigger: TGTGGACTGTAAACTGTTTCAAAAGTGATCTGCACA...GAGAGTAAGAGGAGTAAGAGAATGAGGTGGGGCCAAGCAGCCCCTCTTATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR GCA 90 bp | CACCATAAGAGGGGCTGCTTGGCCCCACCTCATTCTCTTACTCCTCTTACTCTCTCTCATGTTGGCCATTaGTATATTCCTCCTGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: HHKRGCLAPPHSLTPLTLSHVGH*YIPPVS Trigger: AGATACAGGAGGAATATAGCAATGGCCAACATGAGA...GAGAGTAAGAGGAGTAAGAGAATGAGGTGGGGCCAAGCAGCCCCTCTTATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR GCA 90 bp | TTAAACAGGTATCTTTTGACAGTGAGGGAGCCTGGTAGGCCAGTGGGTATTATAGACTATCCAGTGCTCTaGCCCTTCCTCCTGACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LNRYLLTVREPGRPVGIIDYPVL*PFLLTL Trigger: AAGAGTCAGGAGGAAGGGGCAGAGCACTGGATAGTC...TATAATACCCACTGGCCTACCAGGCTCCCTCACTGTCAAAAGATACCTGTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CCA 90 bp | AATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGAACATCACCAGAAGTTTTTCTATGGAGTCCTaGTCCTGTCCTTTGTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: NRPESAEAARSHQNITRSFSMES*SCPLCS Trigger: AGAACACAAAGGACAGGACCAGGACTCCATAGAAAA...ACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCGGAGGTCTTGAGTTCTATTCCCAGCAACCACATGCTGTCTTAAATACCCTTGGATGGTCTCAGATCTaGAGGTTTTCTGCTGTACTG | + |
|
Preference number: 2 (lower is better) Translates to: SGGLEFYSQQPHAVLNTLGWSQI*RFSAVL Trigger: CAGTACAGCAGAAAACCTTCAGATCTGAGACCATCC...AAGGGTATTTAAGACAGCATGTGGTTGCTGGGAATAGAACTCAAGACCTCCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTGGACTTGTTTAGAAGAGTGCAGATCCAGCTaGAGCTGTAGCAGAGCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: EVVEKKVIRIQGKWTCLEECRSS*SCSRAS Trigger: GCTAGCTCTGCTACAGCTTCAGCTGGATCTGCACTC...TTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCCTATTTATACTCCCTCCAAACATCATGTGTCCTCCAATGGGTTTTGCTTCATCTGCCCCTTCCTCCTaGCTCTTCTGGTTTATAACC | + |
|
Preference number: 2 (lower is better) Translates to: ILFILPPNIMCPPMGFASSAPSS*LFWFIT Trigger: GGTTATAAACCAGAAGAGTCAGGAGGAAGGGGCAGA...TGAAGCAAAACCCATTGGAGGACACATGATGTTTGGAGGGAGTATAAATAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCTAGGGCTGAGCCACAGCACAACAAGGTTTTTCTAGTTCACAATCTTGGGAAATGTCCTGCTATGTaGACTTCTTCCGACCTTATA | + |
|
Preference number: 2 (lower is better) Translates to: CPRAEPQHNKVFLVHNLGKCPAM*TSSDLI Trigger: TATAAGGTCGGAAGAAGTTCACATAGCAGGACATTT...CCCAAGATTGTGAACTAGAAAAACCTTGTTGTGCTGTGGCTCAGCCCTAGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCTAGGGCTGAGCCACAGCACAACAAGGTTTTTCTAGTTCACAATCTTGGGTGTTCGTTGACATACTaGCTTTCCAAAGAAACCTTA | + |
|
Preference number: 2 (lower is better) Translates to: CPRAEPQHNKVFLVHNLGCSLTY*LSKETL Trigger: TAAGGTTTCTTTGGAAAGTCAGTATGTCAACGAACA...CCCAAGATTGTGAACTAGAAAAACCTTGTTGTGCTGTGGCTCAGCCCTAGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CAA 90 bp | CAGATCACTTTTGAAACAGTTTACAGTCCACAGTTGATATCCGGATaGCATTTATTATCCAAGTGGATACAGACTGGTCCTGTCCTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: QITFETVYSPQLISG*HLLSKWIQTGPVLC Trigger: ACAAAGGACAGGACCAGTCTGTATCCACTTGGATAATAAATGCAATCCGGATATCAACTGTGGACTGTAAACTGTTTCAAAAGTGATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTGGACTTGTTTAGAAATTGTTAGGTATCTCTGGAGGTaGGCAGGACATATATCATCC | + |
|
Preference number: 2 (lower is better) Translates to: VEKKVIRIQGKWTCLEIVRYLWR*AGHISS Trigger: GGATGATATATGTCCTGCTCACCTCCAGAGATACCT...AACAATTTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | AGTGCTCCCATTACTCAGAAGCTCACAGCCCAAAGTTaGCTGGAGAGTGTGAAGGCCTGGCCCGCCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SAPITQKLTAQS*LESVKAWPAPG Trigger: GCCTGGGGCGGGCCAGGCCTTCACACTCTCCAGGCAACTTTGGGCTGTGAGCTTCTGAGTAATGGGAGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | CTCACAGCCCAAAGTTGCCTGGAGAGTGTGAAGGCCTaGCCCGCCCCAGGCAGGAACTCGTTACCTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTAQSCLESVKA*PAPGRNSLPSC Trigger: ACAAGAAGGTAACGAGTTCCTGCCTGGGGCGGGCCAGGCCTTCACACTCTCCAGGCAACTTTGGGCTGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CAA 90 bp | CGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGTTGCCATGCCTCAGGTaGCAGCTGAACTGTGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RHHSANRPESAEAARSHQLPCLR*QLNCGS Trigger: GGAACCACAGTTCAGCTGCAACCTGAGGCATGGCAA...CTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | GCTATGGTTGCCATGCCTCAGGTTGCAGCTGAACTGTaGTTCCTGTCCAGGAAGAACCCGAATGGACACCCG | + |
|
Preference number: 3 (lower is better) Translates to: AMVAMPQVAAEL*FLSRKNPNGHP Trigger: CGGGTGTCCATTCGGGTTCTTCCTGGACAGGAACCACAGTTCAGCTGCAACCTGAGGCATGGCAACCATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CAA 90 bp | CGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGGTCTTCCAGAACATCTaGTTCTGCTGGGTGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RHHSANRPESAEAARSHQVFQNI*FCWVEG Trigger: ACCCTCCACCCAGCAGAACAAGATGTTCTGGAAGAC...CTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | GCTGGGTCTTCTCAGACCCCTCCAGAGAATGGGCTCTaGCATTATAGCGCAGAGTGTGGGTTCCTTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGSSQTPPENGL*HYSAECGFLGE Trigger: CTCTCCAAGGAACCCACACTCTGCGCTATAATGTCAGAGCCCATTCTCTGGAGGGGTCTGAGAAGACCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | AGGTCCCATCCCCGCTGGGCAGGATGGTCTCAGATCTaGAGGTTTTCTGCTGTACTGGCTTCCCATCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSHPRWAGWSQI*RFSAVLASHPE Trigger: TTCAGGATGGGAAGCCAGTACAGCAGAAAACCTTCAGATCTGAGACCATCCTGCCCAGCGGGGATGGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | TACACAGACAATCTGGTCTCCAGTCGAGCTGAGGTCTaGACCCCGGGACCCGGTGGTGATAATTCACCTACG | + |
|
Preference number: 3 (lower is better) Translates to: YTDNLVSSRAEV*TPGPGGDNSPT Trigger: CGTAGGTGAATTATCACCACCGGGTCCCGGGGTTCAGACCTCAGCTCGACTGGAGACCAGATTGTCTGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | GCTCTGGGTGCATGTGTCTTCCAGAACATCTTGTTCTaGTGGGTGGAGGGTCCATCCACTGTCCACGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALGACVFQNILF*WVEGPSTVHVR Trigger: TCTCACGTGGACAGTGGATGGACCCTCCACCCAGCAGAACAAGATGTTCTGGAAGACACATGCACCCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | GTCCTTTGTGTTCTGGATTCAGTTGGCTCTGGCCAGTaGCACCGCCAATACAACAGGGAGTGCAGATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLCVLDSVGSGQ*HRQYNRECRSS Trigger: GCTGGATCTGCACTCCCTGTTGTATTGGCGGTGGCACTGGCCAGAGCCAACTGAATCCAGAACACAAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | CTATCTCTGTTCATCAAGGCCCTCTGCGCTTACTCTTaGCTGCGTGGAAACCTCTCTCCCTCAGCCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSLFIKALCAYS*LRGNLSPSALS Trigger: AGAGAGGGCTGAGGGAGAGAGGTTTCCACGCAGGCAAGAGTAAGCGCAGAGGGCCTTGATGAACAGAGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | AGCGCAGAGTGTGGGTTCCTTGGAGAGGCACAGCCTTaGTGTGTGGTGGTGGTTTGTCTCTGGATTGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SAECGFLGEAQP*CVVVVCLWIAS Trigger: AGAAGCAATCCAGAGACAAACCACCACCACACACCAAGGCTGTGCCTCTCCAAGGAACCCACACTCTGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | CTGGGTGCATGTGTCTTCCAGAACATCTTGTTCTGCTaGGTGGAGGGTCCATCCACTGTCCACGTGAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGACVFQNILFC*VEGPSTVHVRV Trigger: GACTCTCACGTGGACAGTGGATGGACCCTCCACCCAGCAGAACAAGATGTTCTGGAAGACACATGCACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | CAGGATGGTCTCAGATCTGAAGGTTTTCTGCTGTACTaGCTTCCCATCCTGAAGCCAGACCAGGGTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QDGLRSEGFLLY*LPILKPDQGGL Trigger: GAGGCCACCCTGGTCTGGCTTCAGGATGGGAAGCCAGTACAGCAGAAAACCTTCAGATCTGAGACCATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | TGGTCCTGTCCTTTGTGTTCTGGATTCAGTTGGCTCTaGCCAGTGCCACCGCCAATACAACAGGGAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WSCPLCSGFSWL*PVPPPIQQGVQ Trigger: CTGCACTCCCTGTTGTATTGGCGGTGGCACTGGCCAGAGCCAACTGAATCCAGAACACAAAGGACAGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | GTTCATCAAGGCCCTCTGCGCTTACTCTTGCCTGCGTaGAAACCTCTCTCCCTCAGCCCTCTCTCCTATAAC | + |
|
Preference number: 3 (lower is better) Translates to: VHQGPLRLLLPA*KPLSLSPLSYN Trigger: GTTATAGGAGAGAGGGCTGAGGGAGAGAGGTTTCCACGCAGGCAAGAGTAAGCGCAGAGGGCCTTGATGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | GATCTGAAGGTTTTCTGCTGTACTGGCTTCCCATCCTaGAGCCAGACCAGGGTGGCCTCACGGGTATACAGA | + |
|
Preference number: 3 (lower is better) Translates to: DLKVFCCTGFPS*SQTRVASRVYR Trigger: TCTGTATACCCGTGAGGCCACCCTGGTCTGGCTTCAGGATGGGAAGCCAGTACAGCAGAAAACCTTCAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | CCAGAGACAGCTGTCTGCATGATGCTATGGTTGCCATaGCTCAGGTTGCAGCTGAACTGTGGTTCCTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PETAVCMMLWLP*LRLQLNCGSCP Trigger: TGGACAGGAACCACAGTTCAGCTGCAACCTGAGGCATGGCAACCATAGCATCATGCAGACAGCTGTCTCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCCGGCAGAAACAGCCAAGCCTCAGTCAAATTAGCATCAGTCAGCAGGAGGTGTGTGGTGGTGGTTaGTCTCTGGATTGCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PTRQKQPSLSQISISQQEVCGGG*SLDCFL Trigger: CAAGAAGCAATCCAGAGACAAACCACCACCACACAC...CTCCTGCTGACTGATGCTAATTTGACTGAGGCTTGGCTGTTTCTGCCGGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CAA 90 bp | AATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGAACATCACCAGAAGTGAACTCGTTACCTTCTaGTCCCTGGACCTCACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NRPESAEAARSHQNITRSELVTF*SLDLTP Trigger: GGGAGTGAGGTCCAGGGACAAGAAGGTAACGAGTTC...ACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | AGACTGTATCAGCCGACATCACTCTGCCAATCGGCCTaGGTCTGCAGAAGCTGCAAGAAGCCACCAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: RLYQPTSLCQSA*VCRSCKKPPEH Trigger: ATGTTCTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCGGCTGATACAGTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTCTCATTCTCATGTTGGCCATaGCTATATTCCTCCTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: SRSNQDQQGRQKFFVPLSFSCWP*LYSSCI Trigger: GATACAGGAGGAATATAGCAATGGCCAACATGAGAA...TGAGAGAGGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCATAAGAGGGGCTGCTTGGCCCCACCTCATTCTCTTACTCCTCTTACTCTCTCTCTGGATTGCTTCTaGCTGATGCTAGTCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HHKRGCLAPPHSLTPLTLSLDCF*LMLVLL Trigger: GAGAAGGACTAGCATCAGCAAGAAGCAATCCAGAGA...GAGAGTAAGAGGAGTAAGAGAATGAGGTGGGGCCAAGCAGCCCCTCTTATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | ACAGCCTTGGTGTGTGGTGGTGGTTTGTCTCTGGATTaGTTCTTGCTGATGCTAGTCCTTCTCATGTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TALVCGGGLSLD*FLLMLVLLMLA Trigger: GGCCAACATGAGAAGGACTAGCATCAGCAAGAAGCAATCCAGAGACAAACCACCACCACACACCAAGGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | CTGAGACTTCAGCCTAGAAGGGACTATCCAGTGCTCTaGCCCTTCCTCCTGACTCTTCTGGTTTATAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRLQPRRDYPVL*PFLLTLLVYNL Trigger: GAGGTTATAAACCAGAAGAGTCAGGAGGAAGGGGCAGAGCACTGGATAGTCCCTTCTAGGCTGAAGTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | TTAAGATGGAGTCTGGCTGGCCCATCATTTCTGCCTTaGCTTGTGTGCCCCTTTCAAATCCTTGCCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRWSLAGPSFLP*LVCPFQILARE Trigger: TTCCCTGGCAAGGATTTGAAAGGGGCACACAAGGCAAGGCAGAAATGATGGGCCAGCCAGACTCCATCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | ACCTACGTGGAACAGAAGGAGTTCTCTCATATCTCCTaGATTCAAGGCTCCTGTCGAAGTTACCGCCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TYVEQKEFSHIS*IQGSCRSYRPP Trigger: TGGAGGGCGGTAACTTCGACAGGAGCCTTGAATCCAGGAGATATGAGAGAACTCCTTCTGTTCCACGTAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | GGGCGCCAGAAGTTCTTTGTGCCTCTCTCAATGAAGTaGAGATCAGTAGAGACCAACAAAGCTTGCAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRQKFFVPLSMK*RSVETNKACKP Trigger: GGGCTTGCAAGCTTTGTTGGTCTCTACTGATCTTCACTTCATTGAGAGAGGCACAAAGAACTTCTGGCGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR CCA 72 bp | ATGTTGGCCATTGCTATATTCCTCCTGTATCTAGCATaGTGTGAATGGGCACAGGGAGACCCTCACTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: MLAIAIFLLYLA*CEWAQGDPHCP Trigger: TGGACAGTGAGGGTCTCCCTGTGCCCATTCACACCATGCTAGATACAGGAGGAATATAGCAATGGCCAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | TTCAGTAGTGTCAGGATATCAAATATGAATCATCAGTaGTGGCCCCACCCGGCAGAAACAGCCAAGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FSSVRISNMNHQ*WPHPAETAKPQ Trigger: CTGAGGCTTGGCTGTTTCTGCCGGGTGGGGCCACCACTGATGATTCATATTTGATATCCTGACACTACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR CCA 72 bp | ATCCTCTTTGTTCTGTATAGAGCAGGTGGAGTGCTGTaGGGCATTGGGCTATACACAGACAATCTGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ILFVLYRAGGVL*GIGLYTDNLVS Trigger: GGAGACCAGATTGTCTGTGTATAGCCCAATGCCCCACAGCACTCCACCTGCTCTATACAGAACAAAGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | AACAAAATGTCTTCCCTCCTTAAGATGGAGTCTGGCTaGCCCATCATTTCTGCCTTGCCTTGTGTGCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NKMSSLLKMESG*PIISALPCVPL Trigger: AAGGGGCACACAAGGCAAGGCAGAAATGATGGGCCAGCCAGACTCCATCTTAAGGAGGGAAGACATTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTAGGGCTGAGCCACAGCACAACAAGGTTTTTCTAGTTCACAATCTTGGGGCCCCTTTCAAATCCTaGCCAGGGAATGATCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: CPRAEPQHNKVFLVHNLGAPFKS*PGNDHL Trigger: TAAATGATCATTCCCTGGCAAGGATTTGAAAGGGGC...CCCAAGATTGTGAACTAGAAAAACCTTGTTGTGCTGTGGCTCAGCCCTAGGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | CATTGTCCACTGTCTGCTGGGTCCTTCTTAACGTCATaGATCCTTTCACGTGTTTGCTTCAGCGAAATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HCPLSAGSFLTS*ILSRVCFSEMF Trigger: GAACATTTCGCTGAAGCAAACACGTGAAAGGATGCATGACGTTAAGAAGGACCCAGCAGACAGTGGACAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | GTGTCCATCTTGTCCTCTATGCCAGGGAGTTTCCTTTaGATTAACATTCCAGCCTTTGATGAGGATAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSILSSMPGSFL*INIPAFDEDKG Trigger: CCCCTTATCCTCATCAAAGGCTGGAATGTTAATCCAAAGGAAACTCCCTGGCATAGAGGACAAGATGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR TCA 72 bp | CATCATGTGTCCTCCAATGGGTTTTGCTTCAGCACGTaGGTCTGTCTTAGCAAAACTCCACATGAGACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: HHVSSNGFCFST*VCLSKTPHETV Trigger: TACAGTCTCATGTGGAGTTTTGCTAAGACAGACTCACGTGCTGAAGCAAAACCCATTGGAGGACACATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCAGGGAATGATCATTTATATCTGTTGTATAGGCTGATAATGTCAATGGAATGGAGAGGCACAGCCTaGGTGTGTGGTGGTGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPGNDHLYLLYRLIMSMEWRGTA*VCGGGL Trigger: CAAACCACCACCACACACCAAGGCTGTGCCTCTCCA...TTCCATTGACATTATCAGCCTATACAACAGATATAAATGATCATTCCCTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTGGACTTGTTTAGAAGTCCTCCAATGGGTTTaGCTTCAGCACGTGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EVVEKKVIRIQGKWTCLEVLQWV*LQHVSL Trigger: CAGACTCACGTGCTGAAGCAAAACCCATTGGAGGAC...TTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR TCA 72 bp | AGACCGTTTCTCAAGGAAGCGAGGTATCTCTGGAGGTaGGCAGGACATATATCATCCAAGAATGTCTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: RPFLKEARYLWR*AGHISSKNVLT Trigger: AGTTAAGACATTCTTGGATGATATATGTCCTGCTCACCTCCAGAGATACCTCGCTTCCTTGAGAAACGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | ATCCGGATTGCATTTATTATCCAAGTGGATACAGACTaGTCCTGTCCTTTGTGTTCTGGATTCAGTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IRIAFIIQVDTD*SCPLCSGFSWL Trigger: GAGCCAACTGAATCCAGAACACAAAGGACAGGACCAGTCTGTATCCACTTGGATAATAAATGCAATCCGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | CTTGGGGTTCACAATGTGGTCAAATGTCCTGCTATGTaGACTTCTTCCGACCTTATAACAAAATGTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGVHNVVKCPAM*TSSDLITKCLP Trigger: GGGAAGACATTTTGTTATAAGGTCGGAAGAAGTTCACATAGCAGGACATTTGACCACATTGTGAACCCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR GCA 72 bp | ATTTCTGCCTTGCCTTGTGTGCCCCTTTCAAATCCTTaGCAGGGAATGATCATTTATATCTGTTGTATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ISALPCVPLSNP*QGMIIYICCIG Trigger: GCCTATACAACAGATATAAATGATCATTCCCTGGCAAGGATTTGAAAGGGGCACACAAGGCAAGGCAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTATTTATACTCCCTCCAAACATCATGTGTCCTCCAATGGGTTTTGCTTCATGGTTTGTCTCTGGATaGCTTCTTGCTGATGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: ILFILPPNIMCPPMGFASWFVSG*LLADAS Trigger: ACTAGCATCAGCAAGAAGCAATCCAGAGACAAACCA...TGAAGCAAAACCCATTGGAGGACACATGATGTTTGGAGGGAGTATAAATAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | AGCAAATCCCATCTGCATTGTCAGGAAATTAGCACATaGGTCAACAGAGCTCGATACACTCATAAACACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SKSHLHCQEIST*VNRARYTHKHF Trigger: GAAGTGTTTATGAGTGTATCGAGCTCTGTTGACTCATGTGCTAATTTCCTGACAATGCAGATGGGATTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCCGACCTTATAACAAAATGTCTTCCCTCCTTAAGATGGAGTCTGGCTGGTTTAGAAATTGTTCTTaGGAGCAAATCCCATCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FFRPYNKMSSLLKMESGWFRNCS*EQIPSA Trigger: TGCAGATGGGATTTGCTCCAAAGAACAATTTCTAAA...CCAGCCAGACTCCATCTTAAGGAGGGAAGACATTTTGTTATAAGGTCGGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | TCACCAGAAGTTTTTCTATGGAGTCCTGACAAAAGATaGCCAATAAACAATGGTAAGGCGTACCAATACCAT | + |
|
Preference number: 3 (lower is better) Translates to: SPEVFLWSPDKR*PINNGKAYQYH Trigger: ATGGTATTGGTACGCCTTACCATTGTTTATTGGTCATCTTTTGTCAGGACTCCATAGAAAAACTTCTGGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | TGCAGATCACTTTTGAAACAGTTTACAGTCCACAGTTaGTATCCGGATTGCATTTATTATCCAAGTGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: CRSLLKQFTVHS*YPDCIYYPSGY Trigger: GTATCCACTTGGATAATAAATGCAATCCGGATATCAACTGTGGACTGTAAACTGTTTCAAAAGTGATCTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR TCA 72 bp | CCACCTCTTGACTTAGGGTTCCTCTTGACCTATCATTaGCTTTATTTAATCCTGTTAACAGAAAGCTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PPLDLGFLLTYH*LYLILLTESFL Trigger: CAAAAAGCTTTCTGTTAACAGGATTAAATAAAGTCAATGATAGGTCAAGAGGAACCCTAAGTCAAGAGGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CCA 72 bp | GTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTaGACTTGTTTAGAAATTGTTCTTTGGAGCAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: VVEKKVIRIQGK*TCLEIVLWSKS Trigger: GGATTTGCTCCAAAGAACAATTTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTCAGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCCTGTCCTCAGCAGCATaGCCAGAGACAGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISQQEQPGPAGAPEVLCALSSAA*PETAVC Trigger: GCAGACAGCTGTCTCTGGGCATGCTGCTGAGGACAG...GGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCTGACTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | AGGATGGCGTCAGGGCCCAGGAAAGCTGGAATATTAGCAGAAGGCCGGAAGGGGCTGTCCTCAGCAGCATaGCCAGAGACAGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RMASGPRKAGILAEGRKGLSSAA*PETAVC Trigger: GCAGACAGCTGTCTCTGGGCATGCTGCTGAGGACAG...CCCCTTCCGGCCTTCTGCTAATATTCCAGCTTTCCTGGGCCCTGACGCCATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTCTCACCCGGCATGTCAGTGTaGCCCTACCTACTGGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSNQDQQGRQKFFVPLSPGMSV*PYLLDS Trigger: ACTATCCAGTAGGTAGGGTCACACTGACATGCCGGG...TGAGAGAGGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGTCAGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCGAGTGCAGATCCAGCTaGAGCTGTAGCAGAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISQQEQPGPAGAPEVLCAECRSS*SCSRAS Trigger: GCTAGCTCTGCTACAGCTTCAGCTGGATCTGCACTC...GGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCTGACTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | AGGATGGCGTCAGGGCCCAGGAAAGCTGGAATATTAGCAGAAGGCCGGAAGGGGGAGTGCAGATCCAGCTaGAGCTGTAGCAGAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RMASGPRKAGILAEGRKGECRSS*SCSRAS Trigger: GCTAGCTCTGCTACAGCTTCAGCTGGATCTGCACTC...CCCCTTCCGGCCTTCTGCTAATATTCCAGCTTTCCTGGGCCCTGACGCCATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTCAGCCATCATCCCCCTaGGTTTCTCTTCCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQQEQPGPAGAPEVLCASQPSSP*VSLPPS Trigger: TGAAGGTGGAAGAGAAACTCAGGGGGATGATGGCTG...AGAGGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCTGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAACAGCCAAGCCTCAGTCAAATTAGCATCAGTCAGCAGGAGCAACCAGACTGGCTTCCCATCCTaGAGCCAGACCAGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRNSQASVKLASVSRSNQTGFPS*SQTRVA Trigger: GGCCACCCTGGTCTGGCTTCAGGATGGGAAGCCAGT...CTGGTTGCTCCTGCTGACTGATGCTAATTTGACTGAGGCTTGGCTGTTTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGTCAGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCAGACAGCTGTCTGCATaGTGCTATGGTTGCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISQQEQPGPAGAPEVLCARQLSA*CYGCHA Trigger: GGCATGGCAACCATAGCATCATGCAGACAGCTGTCT...GGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCTGACTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | AGCCGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCTCACAGCCCAAAGTTaGCTGGAGAGTGTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRHHSANRPESAEAARSHLTAQS*LESVKA Trigger: GGCCTTCACACTCTCCAGGCAACTTTGGGCTGTGAG...GTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTCTCACAGAACATCTTGTTCTaGTGGGTGGAGGGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SRSNQDQQGRQKFFVPLSQNILF*WVEGPS Trigger: GGATGGACCCTCCACCCAGCAGAACAAGATGTTCTG...TGAGAGAGGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR CCA 90 bp | CGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGAGAGTGTGGGTTCCTTaGATGCTGGATCCCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RHHSANRPESAEAARSHQRVWVP*MLDPRE Trigger: CTCACGGGGATCCAGCATCCAAGGAACCCACACTCT...CTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227379.2 |
||
| CDS-3UTR GCA 90 bp | AGCCGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGAACATCTTGTTCTaGTGGGTGGAGGGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SRHHSANRPESAEAARSHQNILF*WVEGPS Trigger: GGATGGACCCTCCACCCAGCAGAACAAGATGTTCTG...GTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR CCA 90 bp | AGGATGGCGTCAGGGCCCAGGAAAGCTGGAATATTAGCAGAAGGCCGGAAGGGGAACATCTTGTTCTGCTaGGTGGAGGGTCCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RMASGPRKAGILAEGRKGNILFC*VEGPST Trigger: AGTGGATGGACCCTCCACCCAGCAGAACAAGATGTT...CCCCTTCCGGCCTTCTGCTAATATTCCAGCTTTCCTGGGCCCTGACGCCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR CCA 90 bp | AATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGAACATCACCAGAAGTAGGTCCCATCCCCGCTaGGCAGGATGGTCTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NRPESAEAARSHQNITRSRSHPR*AGWSQI Trigger: GATCTGAGACCATCCTGCCCAGCGGGGATGGGACCT...ACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAACAGCCAAGCCTCAGTCAAATTAGCATCAGTCAGCAGGAGCAACCAGAGGTCCCATCCCCGCTaGGCAGGATGGTCTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GRNSQASVKLASVSRSNQRSHPR*AGWSQI Trigger: GATCTGAGACCATCCTGCCCAGCGGGGATGGGACCT...CTGGTTGCTCCTGCTGACTGATGCTAATTTGACTGAGGCTTGGCTGTTTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR CAA 72 bp | ACTATCTCTGTTCATCAAGGCCCTCTGCGCTTACTCTaGCCTGCGTGGAAACCTCTCTCCCTCAGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TISVHQGPLRLL*PAWKPLSLSPL Trigger: GAGAGGGCTGAGGGAGAGAGGTTTCCACGCAGGCAAGAGTAAGCGCAGAGGGCCTTGATGAACAGAGATAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCACCAGAACATCACCAGAAGTTTTTCTATGGAGTCCTGGTCCTGTCCTACTGGCTTCCCATCCTaGAGCCAGACCAGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSHQNITRSFSMESWSCPTGFPS*SQTRVA Trigger: GGCCACCCTGGTCTGGCTTCAGGATGGGAAGCCAGT...AGGACAGGACCAGGACTCCATAGAAAAACTTCTGGTGATGTTCTGGTGGCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTCTCAAGGGCTCTGTCTCCCTaGTGTCTCCATTGTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSNQDQQGRQKFFVPLSRALSP*CLHCIS Trigger: TGAAATACAATGGAGACAGCAGGGAGACAGAGCCCT...TGAGAGAGGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTGATCTGAAGGTTTTCTaGTGTACTGGCTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SQQEQPGPAGAPEVLCASDLKVF*CTGFPS Trigger: GGATGGGAAGCCAGTACAGCAGAAAACCTTCAGATC...AGAGGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR CAA 72 bp | TACAGACTGGTCCTGTCCTTTGTGTTCTGGATTCAGTaGGCTCTGGCCAGTGCCACCGCCAATACAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRLVLSFVFWIQ*ALASATANTTG Trigger: CCCTGTTGTATTGGCGGTGGCACTGGCCAGAGCCAACTGAATCCAGAACACAAAGGACAGGACCAGTCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGGAGCAACCAGGACCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTCTCACTACTGGATAGTTCCTaGAGGTCACAGTTACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSNQDQQGRQKFFVPLSLLDSS*RSQLPL Trigger: CAATGGTAACTGTGACCTGCAGGAACTATCCAGTAG...TGAGAGAGGCACAAAGAACTTCTGGCGCCCCTGCTGGTCCTGGTTGCTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR CCA 90 bp | AATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGAACATCACCAGAAGTGCAGAGTGTGGGTTCTaGTCAGCCTGCTGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRPESAEAARSHQNITRSAECGF*SACWNH Trigger: ATGGTTCCAGCAGGCTGACCAGAACCCACACTCTGC...ACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228493.2 |
||
| 3UTR CAA 72 bp | CCTTGGAGAGGCACAGCCTTGGTGTGTGGTGGTGGTTaGTCTCTGGATTGCTTCTTGCTGATGCTAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PWRGTALVCGGG*SLDCFLLMLVL Trigger: AAGGACTAGCATCAGCAAGAAGCAATCCAGAGACAAACCACCACCACACACCAAGGCTGTGCCTCTCCAAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CAA 72 bp | GATGGAGTCTGGCTGGCCCATCATTTCTGCCTTGCCTaGTGTGCCCCTTTCAAATCCTTGCCAGGGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGVWLAHHFCLA*CAPFKSLPGND Trigger: ATCATTCCCTGGCAAGGATTTGAAAGGGGCACACAAGGCAAGGCAGAAATGATGGGCCAGCCAGACTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CAA 72 bp | CTTAAGATGGAGTCTGGCTGGCCCATCATTTCTGCCTaGCCTTGTGTGCCCCTTTCAAATCCTTGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKMESGWPIISA*PCVPLSNPCQG Trigger: TCCCTGGCAAGGATTTGAAAGGGGCACACAAGGCAAGGCAGAAATGATGGGCCAGCCAGACTCCATCTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| CDS-3UTR TCA 90 bp | ATGGTAAGGCGTACCAATACCATCCAGCATTGTCCACTGTCTGCTGGGTCCTTCGTAGGACTGCTGGTCTaGATTCTCTGGGCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MVRRTNTIQHCPLSAGSFVGLLV*ILWAFQ Trigger: CTGGAAAGCCCAGAGAATTCAGACCAGCAGTCCTAC...GAAGGACCCAGCAGACAGTGGACAATGCTGGATGGTATTGGTACGCCTTACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| CDS-3UTR TCA 90 bp | GTTCTTGAATGCTTTAACCTCCCTTCTAGCCCACCACCCACCAGAGGTAGTGGAAGACAGCTGTCTGCATaGTGCTATGGTTGCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLECFNLPSSPPPTRGSGRQLSA*CYGCHA Trigger: GGCATGGCAACCATAGCATCATGCAGACAGCTGTCT...TCCACTACCTCTGGTGGGTGGTGGGCTAGAAGGGAGGTTAAAGCATTCAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | CCCACCCGGCAGAAACAGCCAAGCCTCAGTCAAATTAGCATCAGTCAGCAGGAGAGGGCTCTGTCTCCCTaGTGTCTCCATTGTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTRQKQPSLSQISISQQERALSP*CLHCIS Trigger: TGAAATACAATGGAGACAGCAGGGAGACAGAGCCCT...CTCCTGCTGACTGATGCTAATTTGACTGAGGCTTGGCTGTTTCTGCCGGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCATCTTGTCCTCTATGCCAGGGAGTTTCCTTTGGATTAACATTCCAGCCTGCCTCAGGTTGCAGCTaGACTGTGGTTCCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPSCPLCQGVSFGLTFQPASGCS*TVVPVQ Trigger: CTGGACAGGAACCACAGTTCAGCTGCAACCTGAGGC...AGGCTGGAATGTTAATCCAAAGGAAACTCCCTGGCATAGAGGACAAGATGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGAACATCACCAGAAGTTTTTCTGAGCTAGCAACATCCTaGCTGTCCTCAGCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PESAEAARSHQNITRSFSELATS*LSSAAC Trigger: GCATGCTGCTGAGGACAGTCAGGATGTTGCTAGCTC...AGAAAAACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGGATGGCGTCAGGGCCCAGGAAAGCTGGAATATTAGCAGAAGGCCGGAAGGATCTGAAGGTTTTCTaGTGTACTGGCTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IRMASGPRKAGILAEGRKDLKVF*CTGFPS Trigger: GGATGGGAAGCCAGTACAGCAGAAAACCTTCAGATC...CTTCCGGCCTTCTGCTAATATTCCAGCTTTCCTGGGCCCTGACGCCATCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCTAGGGCTGAGCCACAGCACAACAAGGTTTTTCTAGTTCACAATCTTGGGCAGCCCACTCTTTCCTaGAGATCATGGTCAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRAEPQHNKVFLVHNLGQPTLS*RSWSAC Trigger: GCAGGCTGACCATGATCTGCAGGAAAGAGTGGGCTG...CCCAAGATTGTGAACTAGAAAAACCTTGTTGTGCTGTGGCTCAGCCCTAGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CAA 72 bp | CACAGCCTTGGTGTGTGGTGGTGGTTTGTCTCTGGATaGCTTCTTGCTGATGCTAGTCCTTCTCATGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGVWWWFVSG*LLADASPSHVG Trigger: GCCAACATGAGAAGGACTAGCATCAGCAAGAAGCAATCCAGAGACAAACCACCACCACACACCAAGGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| 3UTR CAA 72 bp | TTGTTCTGTATAGAGCAGGTGGAGTGCTGTGGGGCATaGGGCTATACACAGACAATCTGGTCTCCAGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFCIEQVECCGA*GYTQTIWSPVE Trigger: CTCGACTGGAGACCAGATTGTCTGTGTATAGCCCAATGCCCCACAGCACTCCACCTGCTCTATACAGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGGGGCGCCAGAAGTTCTTTGTGCCTCTCTCAATGAAGTGAAGATCAGTGGATGGTCTCAGATCTaGAGGTTTTCTGCTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGAPEVLCASLNEVKISGWSQI*RFSAVL Trigger: CAGTACAGCAGAAAACCTTCAGATCTGAGACCATCC...ACTGATCTTCACTTCATTGAGAGAGGCACAAAGAACTTCTGGCGCCCCTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR TCA 90 bp | ATAAAAGTTCTTGAATGCTTTAACCTCCCTTCTAGCCCACCACCCACCAGAGGTGAGCTAGCAACATCCTaGCTGTCCTCAGCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: IKVLECFNLPSSPPPTRGELATS*LSSAAC Trigger: GCATGCTGCTGAGGACAGTCAGGATGTTGCTAGCTC...ACCTCTGGTGGGTGGTGGGCTAGAAGGGAGGTTAAAGCATTCAAGAACTTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR GCA 90 bp | ATTAGGATGGCGTCAGGGCCCAGGAAAGCTGGAATATTAGCAGAAGGCCGGAAGATTGTTAGTCTCTCTTaGACAGGTCTCATTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRMASGPRKAGILAEGRKIVSLS*TGLISP Trigger: GGGGGAAATGAGACCTGTGCAAGAGAGACTAACAAT...CTTCCGGCCTTCTGCTAATATTCCAGCTTTCCTGGGCCCTGACGCCATCCTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR CCA 90 bp | GCCCACCACCCACCAGAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGAACATCTTGTTCTGCTaGGTGGAGGGTCCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AHHPPEVVEKKVIRIQGKNILFC*VEGPST Trigger: AGTGGATGGACCCTCCACCCAGCAGAACAAGATGTT...CTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTCTGGTGGGTGGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| 3UTR CAA 72 bp | GTAAAGATAACAGCACACCACCATAAGAGGGGCTGCTaGGCCCCACCTCATTCTCTTACTCCTCTTACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKITAHHHKRGC*APPHSLTPLTL Trigger: GAGAGTAAGAGGAGTAAGAGAATGAGGTGGGGCCAAGCAGCCCCTCTTATGGTGGTGTGCTGTTATCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| CDS-3UTR TCA 90 bp | TGTCCATCTTGTCCTCTATGCCAGGGAGTTTCCTTTGGATTAACATTCCAGCCTGTAGGACTGCTGGTCTaGATTCTCTGGGCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPSCPLCQGVSFGLTFQPVGLLV*ILWAFQ Trigger: CTGGAAAGCCCAGAGAATTCAGACCAGCAGTCCTAC...AGGCTGGAATGTTAATCCAAAGGAAACTCCCTGGCATAGAGGACAAGATGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGTCTGCAGAAGCTGCAAGAAGCCACCAGAACATCACCAGAAGTTTTTCTAGGTATCTCTGGAGGTaGGCAGGACATATATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PESAEAARSHQNITRSFSRYLWR*AGHISS Trigger: GGATGATATATGTCCTGCTCACCTCCAGAGATACCT...AGAAAAACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCTTCTGCAGACTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR CCA 90 bp | AAGCTGCAAGAAGCCACCAGAACATCACCAGAAGTTTTTCTATGGAGTCCTGGTGGTTTTCTGCTGTACTaGCTTCCCATCCTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLQEATRTSPEVFLWSPGGFLLY*LPILKP Trigger: TGGCTTCAGGATGGGAAGCCAGTACAGCAGAAAACC...ACCAGGACTCCATAGAAAAACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR TCA 90 bp | CTGTCCATTAGATCCTATTTATACTCCCTCCAAACATCATGTGTCCTCCAATGGCAGCCATCATCCCCCTaGGTTTCTCTTCCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSIRSYLYSLQTSCVLQWQPSSP*VSLPPS Trigger: TGAAGGTGGAAGAGAAACTCAGGGGGATGATGGCTG...CCATTGGAGGACACATGATGTTTGGAGGGAGTATAAATAGGATCTAATGGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGCAAGAAGCCACCAGAACATCACCAGAAGTTTTTCTATGGAGTCCTGGTCCTACTGGATAGTTCCTaGAGGTCACAGTTACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SCKKPPEHHQKFFYGVLVLLDSS*RSQLPL Trigger: CAATGGTAACTGTGACCTGCAGGAACTATCCAGTAG...GACCAGGACTCCATAGAAAAACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | TTAAACAGGTATCTTTTGACAGTGAGGGAGCCTGGTAGGCCAGTGGGTATTATAATGCTATGGTTGCCATaGCTCAGGTTGCAGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNRYLLTVREPGRPVGIIMLWLP*LRLQLN Trigger: GTTCAGCTGCAACCTGAGGCATGGCAACCATAGCAT...TATAATACCCACTGGCCTACCAGGCTCCCTCACTGTCAAAAGATACCTGTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR CAA 72 bp | TTTATTATCCAAGTGGATACAGACTGGTCCTGTCCTTaGTGTTCTGGATTCAGTTGGCTCTGGCCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIIQVDTDWSCP*CSGFSWLWPVP Trigger: TGGCACTGGCCAGAGCCAACTGAATCCAGAACACAAAGGACAGGACCAGTCTGTATCCACTTGGATAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTGGACTTGTTTAGAACCCGGCATGTCAGTGTaGCCCTACCTACTGGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVVEKKVIRIQGKWTCLEPGMSV*PYLLDS Trigger: ACTATCCAGTAGGTAGGGTCACACTGACATGCCGGG...TTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGTTCTTGAATGCTTTAACCTCCCTTCTAGCCCACCACCCACCAGAGGTATTGTTAGTCTCTCTTaGACAGGTCTCATTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKVLECFNLPSSPPPTRGIVSLS*TGLISP Trigger: GGGGGAAATGAGACCTGTGCAAGAGAGACTAACAAT...ACCTCTGGTGGGTGGTGGGCTAGAAGGGAGGTTAAAGCATTCAAGAACTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR CCA 90 bp | CTGTCCATTAGATCCTATTTATACTCCCTCCAAACATCATGTGTCCTCCAATGGGGTTTTCTGCTGTACTaGCTTCCCATCCTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSIRSYLYSLQTSCVLQWGFLLY*LPILKP Trigger: TGGCTTCAGGATGGGAAGCCAGTACAGCAGAAAACC...CCATTGGAGGACACATGATGTTTGGAGGGAGTATAAATAGGATCTAATGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| 3UTR CAA 72 bp | CTGGATTGCTTCTTGCTGATGCTAGTCCTTCTCATGTaGGCCATTGCTATATTCCTCCTGTATCTAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LDCFLLMLVLLM*AIAIFLLYLAW Trigger: CCATGCTAGATACAGGAGGAATATAGCAATGGCCAACATGAGAAGGACTAGCATCAGCAAGAAGCAATCCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| CDS-3UTR TCA 90 bp | ATTGTCAGGAAATTAGCACATGAGTCAACAGAGCTCGATACACTCATAAACACTGTAGGACTGCTGGTCTaGATTCTCTGGGCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVRKLAHESTELDTLINTVGLLV*ILWAFQ Trigger: CTGGAAAGCCCAGAGAATTCAGACCAGCAGTCCTAC...AGTGTTTATGAGTGTATCGAGCTCTGTTGACTCATGTGCTAATTTCCTGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCCATTAGATCCTATTTATACTCCCTCCAAACATCATGTGTCCTCCAATGGAGGTATCTCTGGAGGTaGGCAGGACATATATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSIRSYLYSLQTSCVLQWRYLWR*AGHISS Trigger: GGATGATATATGTCCTGCTCACCTCCAGAGATACCT...CCATTGGAGGACACATGATGTTTGGAGGGAGTATAAATAGGATCTAATGGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR TCA 90 bp | GTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTGGACTTGTTTAGAAATTGTTGCCTCAGGTTGCAGCTaGACTGTGGTTCCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEKKVIRIQGKWTCLEIVASGCS*TVVPVQ Trigger: CTGGACAGGAACCACAGTTCAGCTGCAACCTGAGGC...AACAATTTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR CCA 90 bp | ATTAGATCCTATTTATACTCCCTCCAAACATCATGTGTCCTCCAATGGGTTTTGGTCTCATTTCCCCCATaGCCCTTAATCCAGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSYLYSLQTSCVLQWVLVSFPP*PLIQHP Trigger: GGGATGCTGGATTAAGGGCCATGGGGGAAATGAGAC...CAAAACCCATTGGAGGACACATGATGTTTGGAGGGAGTATAAATAGGATCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR CCA 90 bp | GAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTGGACTTGTTTAGAAGTCTCATTTCCCCCATaGCCCTTAATCCAGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: EVVEKKVIRIQGKWTCLEVSFPP*PLIQHP Trigger: GGGATGCTGGATTAAGGGCCATGGGGGAAATGAGAC...TTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| 3UTR CAA 72 bp | CTCAATGAAGTGAAGATCAGTAGAGACCAACAAAGCTaGCAAGCCCGCAGTCACTGTCCATTAGATCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: LNEVKISRDQQS*QARSHCPLDPI Trigger: AATAGGATCTAATGGACAGTGACTGCGGGCTTGCAAGCTTTGTTGGTCTCTACTGATCTTCACTTCATTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206487.3 ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR GCA 90 bp | ATTAGATCCTATTTATACTCCCTCCAAACATCATGTGTCCTCCAATGGGTTTTGATGCTATGGTTGCCATaGCTCAGGTTGCAGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IRSYLYSLQTSCVLQWVLMLWLP*LRLQLN Trigger: GTTCAGCTGCAACCTGAGGCATGGCAACCATAGCAT...CAAAACCCATTGGAGGACACATGATGTTTGGAGGGAGTATAAATAGGATCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR GCA 90 bp | GAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTGGACTTGTTTAGAAAGATCATGGTCAGCCTaGTGGAACCATGAACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVVEKKVIRIQGKWTCLERSWSA*WNHEPP Trigger: TGGAGGTTCATGGTTCCAGCAGGCTGACCATGATCT...TTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| CDS-3UTR TCA 90 bp | ATTGTCAGGAAATTAGCACATGAGTCAACAGAGCTCGATACACTCATAAACACTGGATGGTCTCAGATCTaGAGGTTTTCTGCTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: IVRKLAHESTELDTLINTGWSQI*RFSAVL Trigger: CAGTACAGCAGAAAACCTTCAGATCTGAGACCATCC...AGTGTTTATGAGTGTATCGAGCTCTGTTGACTCATGTGCTAATTTCCTGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| 3UTR CAA 72 bp | TTTGAAACAGTTTACAGTCCACAGTTGATATCCGGATaGCATTTATTATCCAAGTGGATACAGACTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FETVYSPQLISG*HLLSKWIQTGP Trigger: AGGACCAGTCTGTATCCACTTGGATAATAAATGCAATCCGGATATCAACTGTGGACTGTAAACTGTTTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 72 bp | GTGCAGATCACTTTTGAAACAGTTTACAGTCCACAGTaGATATCCGGATTGCATTTATTATCCAAGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VQITFETVYSPQ*ISGLHLLSKWI Trigger: TATCCACTTGGATAATAAATGCAATCCGGATATCAACTGTGGACTGTAAACTGTTTCAAAAGTGATCTGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| 3UTR CAA 72 bp | TTCAAATCCTTGCCAGGGAATGATCATTTATATCTGTaGTATAGGCTGATAATGTCAATGGAAGCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FKSLPGNDHLYL*YRLIMSMEAKY Trigger: ATACTTGGCTTCCATTGACATTATCAGCCTATACAACAGATATAAATGATCATTCCCTGGCAAGGATTTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206487.3 |
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| CDS-3UTR CAA 90 bp | AGGATGGCGTCAGGGCCCAGGAAAGCTGGAATATTAGCAGAAGGCCGGAAGGGGTTGCCATGCCTCAGGTaGCAGCTGAACTGTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RMASGPRKAGILAEGRKGLPCLR*QLNCGS Trigger: GGAACCACAGTTCAGCTGCAACCTGAGGCATGGCAA...CCCCTTCCGGCCTTCTGCTAATATTCCAGCTTTCCTGGGCCCTGACGCCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR CAA 90 bp | AGCCGACATCACTCTGCCAATCGGCCTGAGTCTGCAGAAGCTGCAAGAAGCCACGTCTTCCAGAACATCTaGTTCTGCTGGGTGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRHHSANRPESAEAARSHVFQNI*FCWVEG Trigger: ACCCTCCACCCAGCAGAACAAGATGTTCTGGAAGAC...GTGGCTTCTTGCAGCTTCTGCAGACTCAGGCCGATTGGCAGAGTGATGTCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
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| CDS-3UTR CAA 90 bp | CCCACCCGGCAGAAACAGCCAAGCCTCAGTCAAATTAGCATCAGTCAGCAGGAGTGCATGATGCTATGGTaGCCATGCCTCAGGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PTRQKQPSLSQISISQQECMMLW*PCLRLQ Trigger: CTGCAACCTGAGGCATGGCAACCATAGCATCATGCA...CTCCTGCTGACTGATGCTAATTTGACTGAGGCTTGGCTGTTTCTGCCGGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCAAGAAGCCACCAGAACATCACCAGAAGTTTTTCTATGGAGTCCTGGTGTCTTCCAGAACATCTaGTTCTGCTGGGTGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLQEATRTSPEVFLWSPGVFQNI*FCWVEG Trigger: ACCCTCCACCCAGCAGAACAAGATGTTCTGGAAGAC...ACCAGGACTCCATAGAAAAACTTCTGGTGATGTTCTGGTGGCTTCTTGCAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTAGTGGAAAAGAAAGTTATTAGGATACAGGGGAAGTGGACTTGTTTAGAATTGCCATGCCTCAGGTaGCAGCTGAACTGTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVVEKKVIRIQGKWTCLELPCLR*QLNCGS Trigger: GGAACCACAGTTCAGCTGCAACCTGAGGCATGGCAA...TTCTAAACAAGTCCACTTCCCCTGTATCCTAATAACTTTCTTTTCCACTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227379.2 ENSMUST00000228493.2 |
||
| CDS TCA 72 bp | GCTGGGTCTTCTCAGACCCCTCCAGAGAATGGGCTCTaGCATTATAGCGCAGAGTGTGGGTTCTGGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGSSQTPPENGL*HYSAECGFWSA Trigger: GGCTGACCAGAACCCACACTCTGCGCTATAATGTCAGAGCCCATTCTCTGGAGGGGTCTGAGAAGACCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072386.11 ENSMUST00000228493.2 |
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| CDS TCA 72 bp | GCTGGGTCTTCTCAGACCCCTCCAGAGAATGGGCTCTaGCATTATAGCGCAGAGTGTGGGTTCCTTGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: AGSSQTPPENGL*HYSAECGFLGC Trigger: GCATCCAAGGAACCCACACTCTGCGCTATAATGTCAGAGCCCATTCTCTGGAGGGGTCTGAGAAGACCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072415.9 ENSMUST00000227379.2 |
||
| CDS CCA 72 bp | CATTATAGCGCAGAGTGTGGGTTCTGGTCAGCCTGCTaGAACCATGAACCTCCACGTCAGCCAGAAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HYSAECGFWSAC*NHEPPRQPETL Trigger: AAGGGTTTCTGGCTGACGTGGAGGTTCATGGTTCCAGCAGGCTGACCAGAACCCACACTCTGCGCTATAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072386.11 ENSMUST00000228493.2 |
||
| CDS GCA 72 bp | AGTGCTCCCATTACTCAGAAGCTCACAGCCCAAAGTTaGCTGGAGAGTGTGAAGGCCTTCCTCCTGACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SAPITQKLTAQS*LESVKAFLLTL Trigger: AAGAGTCAGGAGGAAGGCCTTCACACTCTCCAGGCAACTTTGGGCTGTGAGCTTCTGAGTAATGGGAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072386.11 ENSMUST00000072415.9 ENSMUST00000227379.2 ENSMUST00000228493.2 |
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