Pregenerated sensors for MILL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054005Ensembl transcript IDs: ENSMUST00000066780.5
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATCTGTACAATTTACAAAAAGAAGAAAAGGCCTCTCACCACTCCTaGCACCTTCTGCTACAGCCCGCAGGAATGTTCACCTGGTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: YLYNLQKEEKASHHS*HLLLQPAGMFTWSL Trigger: AAGAGACCAGGTGAACATTCCTGCGGGCTGTAGCAGAAGGTGGCAGGAGTGGTGAGAGGCCTTTTCTTCTTTTTGTAAATTGTACAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACTATCTCCCCCAGATGCTTCATGGATATCTTTTGAGGAGAAATTCTCCACCAGGGGGCGGTaGCTCCCAACAGCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: THTLSPPDASWISFEEKFSTRGR*LPTAGQ Trigger: CTGCCCTGCTGTTGGGAGGCACCGCCCCCTGGTGGA...GAATTTCTCCTCAAAAGATATCCATGAAGCATCTGGGGGAGATAGTGTGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR-3UTR GCA 90 bp | CCACAACTCGTACTTTGTTGTGGATGTCTAGCCTGCTTCTTTGCCCCTGTATTTGCCTCTCACCACTCCTaGCACCTTCTGCTACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PQLVLCCGCLACFFAPVFASHHS*HLLLQP Trigger: GGGCTGTAGCAGAAGGTGGCAGGAGTGGTGAGAGGC...AAATACAGGGGCAAAGAAGCAGGCTAGACATCCACAACAAAGTACGAGTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACACACACACACACACACACTATCTCCCCCAGATGCTTCATGGATAACTCCTGCCACCTTCTaGTACAGCCCGCAGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTLSPPDASWITPATF*YSPQEC Trigger: ACATTCCTGCGGGCTGTAGCAGAAGGTGGCAGGAGT...TATCCATGAAGCATCTGGGGGAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR-3UTR CCA 90 bp | GACTCTCGATCATCTCTTGGACTCTCAGTTTTTCCTCTGTCTTGTTTGGCTGTTGCAGGAATGTTCACCTaGTCTCTTGCTGTCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: DSRSSLGLSVFPLSCLAVAGMFT*SLAVLL Trigger: CAGGAGGACAGCAAGAGACCAGGTGAACATTCCTGC...AACAGCCAAACAAGACAGAGGAAAAACTGAGAGTCCAAGAGATGATCGAGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR-3UTR GCA 90 bp | CTCTCGATCATCTCTTGGACTCTCAGTTTTTCCTCTGTCTTGTTTGGCTGTTTGTGTGGATGTCTAGCCTaGTTCTTTGCCCCTGTATTT | + |
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Preference number: 2 (lower is better) Translates to: LSIISWTLSFSSVLFGCLCGCLA*FFAPVF Trigger: AAATACAGGGGCAAAGAAGCAGGCTAGACATCCACA...CAAACAGCCAAACAAGACAGAGGAAAAACTGAGAGTCCAAGAGATGATCGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR-3UTR CCA 90 bp | ACACACACACTATCTCCCCCAGATGCTTCATGGATATCTTTTGAGGAGAAATTCACCAGTGTGGTAAAATaGTGCTTGTGTGACTACCTT | + |
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Preference number: 2 (lower is better) Translates to: THTLSPPDASWISFEEKFTSVVK*CLCDYL Trigger: AAGGTAGTCACACAAGCACCATTTTACCACACTGGT...GAATTTCTCCTCAAAAGATATCCATGAAGCATCTGGGGGAGATAGTGTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGCTTCATGGATATCTTTTGAGGAGAAATTCCCGTGTTTGAATCAAGATCATCATCTGGTAAAATaGCTCTCGATCATCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PDASWISFEEKFPCLNQDHHLVK*LSIISW Trigger: CCAAGAGATGATCGAGAGTCATTTTACCAGATGATG...ATCTTGATTCAAACACGGGAATTTCTCCTCAAAAGATATCCATGAAGCATCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR CCA 72 bp | TGCCACCTTCTGCTACAGCCCGCAGGAATGTTCACCTaGTCTCTTGCTGTCCTCCTGCGTGTTCTTGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: CHLLLQPAGMFT*SLAVLLRVLAA Trigger: AGCAGCAAGAACACGCAGGAGGACAGCAAGAGACCAGGTGAACATTCCTGCGGGCTGTAGCAGAAGGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR GCA 72 bp | AAGAAGAAAAGGCCTCTCACCACTCCTGCCACCTTCTaGTACAGCCCGCAGGAATGTTCACCTGGTCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: KKKRPLTTPATF*YSPQECSPGLL Trigger: CAAGAGACCAGGTGAACATTCCTGCGGGCTGTAGCAGAAGGTGGCAGGAGTGGTGAGAGGCCTTTTCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR GCA 72 bp | AATTTACAAAAAGAAGAAAAGGCCTCTCACCACTCCTaGCACCTTCTGCTACAGCCCGCAGGAATGTTCACC | + |
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Preference number: 3 (lower is better) Translates to: NLQKEEKASHHS*HLLLQPAGMFT Trigger: GGTGAACATTCCTGCGGGCTGTAGCAGAAGGTGGCAGGAGTGGTGAGAGGCCTTTTCTTCTTTTTGTAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | GCCACCTTCTGCTACAGCCCGCAGGAATGTTCACCTGGTCTCTTGCTGTCCTCCCAGCTAGCATCCCTTTaGGTTGCTCCTCTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ATFCYSPQECSPGLLLSSQLASL*VAPLLP Trigger: AGGAAGAAGAGGAGCAACTCAAAGGGATGCTAGCTG...GGAGGACAGCAAGAGACCAGGTGAACATTCCTGCGGGCTGTAGCAGAAGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | AAAAAGAAGAAAAGGCCTCTCACCACTCCTGCCACCTTCTGCTACAGCCCGCAGCCTGCTTCCCACACCTaGGGTGGGAGGTTGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KKKKRPLTTPATFCYSPQPASHT*GGRLFS Trigger: AGAGAACAACCTCCCACCTCAGGTGTGGGAAGCAGG...CTGCGGGCTGTAGCAGAAGGTGGCAGGAGTGGTGAGAGGCCTTTTCTTCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR GCA 90 bp | GCCACCTTCTGCTACAGCCCGCAGGAATGTTCACCTGGTCTCTTGCTGTCCTCCGAGAGCTGTAGTCATTaGACTCCACAGGCTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ATFCYSPQECSPGLLLSSESCSH*TPQAFP Trigger: GGGAAAAGCCTGTGGAGTGCAATGACTACAGCTCTC...GGAGGACAGCAAGAGACCAGGTGAACATTCCTGCGGGCTGTAGCAGAAGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | ACTCCTGCCACCTTCTGCTACAGCCCGCAGGAATGTTCACCTGGTCTCTTGCTGCATCCACTGTCCATGTaGGAGTCTTCTGGTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: TPATFCYSPQECSPGLLLHPLSM*ESSGQR Trigger: CCTTTGACCAGAAGACTCTCACATGGACAGTGGATG...CAGCAAGAGACCAGGTGAACATTCCTGCGGGCTGTAGCAGAAGGTGGCAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR GCA 90 bp | CCACAACTCGTACTTTGTTGTGGATGTCTAGCCTGCTTCTTTGCCCCTGTATTTCCCAGGCCTGGTAGGTaGCATCCCCACTGGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PQLVLCCGCLACFFAPVFPRPGR*HPHWAG Trigger: TCCTGCCCAGTGGGGATGGCACCTACCAGGCCTGGG...AAATACAGGGGCAAAGAAGCAGGCTAGACATCCACAACAAAGTACGAGTTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTGCCACCTTCTGCTACAGCCCGCAGGAATGTTCACCTGGTCTCTTGCTGGGCCCCATCAGTTTCTaGCTTAATGTCCAGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: TPATFCYSPQECSPGLLLGPISF*LNVQEI Trigger: GATCTCCTGGACATTAAGCCAGAAACTGATGGGGCC...CAGCAAGAGACCAGGTGAACATTCCTGCGGGCTGTAGCAGAAGGTGGCAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CCA 90 bp | GCAGGAATGTTCACCTGGTCTCTTGCTGTCCTCCTGCGTGTTCTTGCTGCTCTATTCCCACACCTGAGGTaGGAGGTTGTTCTCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: AGMFTWSLAVLLRVLAALFPHLR*EVVLFS Trigger: CGAGAAGAGAACAACCTCCCACCTCAGGTGTGGGAA...TAGAGCAGCAAGAACACGCAGGAGGACAGCAAGAGACCAGGTGAACATTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACTATCTCCCCCAGATGCTTCATGGATAACTGGCTTTCTATACTaGAGCCAGGTCAGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTLSPPDASWITGFLY*SQVRVA Trigger: GGCCACCCTGACCTGGCTTCAGTATAGAAAGCCAGT...TATCCATGAAGCATCTGGGGGAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACTATCTCCCCCAGATGCTTCATGGATACTCACAGCCGAAGGTTaGCTGGAGGATGTGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTLSPPDASWILTAEG*LEDVKI Trigger: GATCTTCACATCCTCCAGGCAACCTTCGGCTGTGAG...TATCCATGAAGCATCTGGGGGAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR GCA 90 bp | GCAGGAATGTTCACCTGGTCTCTTGCTGTCCTCCTGCGTGTTCTTGCTGCTCTACCTGGGAGTCTGTTATaGTGCTGTTTTTCTTATAGG | + |
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Preference number: 4 (lower is better) Translates to: AGMFTWSLAVLLRVLAALPGSLL*CCFSYR Trigger: CCTATAAGAAAAACAGCAGCATAACAGACTCCCAGG...TAGAGCAGCAAGAACACGCAGGAGGACAGCAAGAGACCAGGTGAACATTCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | TTCACCAGTGTGGTAAAATGGTGCTTGTGTGACTACCTTTCTATCTGTACAATTTCGCAGCTAGGGCTCTaGGGTTCCTGGACAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FTSVVKWCLCDYLSICTISQLGL*GSWTAA Trigger: TGCTGCTGTCCAGGAACCTCAGAGCCCTAGCTGCGA...AATTGTACAGATAGAAAGGTAGTCACACAAGCACCATTTTACCACACTGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | CCACAACTCGTACTTTGTTGTGGATGTCTAGCCTGCTTCTTTGCCCCTGTATTTAGGTATCTCTGGAGCTaGGCAGGACATATGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: PQLVLCCGCLACFFAPVFRYLWS*AGHMSS Trigger: GGATGACATATGTCCTGCTCAGCTCCAGAGATACCT...AAATACAGGGGCAAAGAAGCAGGCTAGACATCCACAACAAAGTACGAGTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACTATCTCCCCCAGATGCTTCATGGATAAATGTCTTGTTCTTCTaGGTGGAAGGTCCATCCACT | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTLSPPDASWINVLFF*VEGPST Trigger: AGTGGATGGACCTTCCACCCAGAAGAACAAGACATT...TATCCATGAAGCATCTGGGGGAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | CCAGATGCTTCATGGATATCTTTTGAGGAGAAATTCCCGTGTTTGAATCAAGATCCAGAGACAAGGCCATaGGGTCATAGCGCAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: PDASWISFEEKFPCLNQDPETRP*GHSAEC Trigger: ACACTCTGCGCTATGACCTCATGGCCTTGTCTCTGG...ATCTTGATTCAAACACGGGAATTTCTCCTCAAAAGATATCCATGAAGCATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | TTCACCAGTGTGGTAAAATGGTGCTTGTGTGACTACCTTTCTATCTGTACAATTGTTGCCTGGAGGATGTaGAGATCCGTATTCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FTSVVKWCLCDYLSICTIVAWRM*RSVFWP Trigger: CGGCCAGAATACGGATCTTCACATCCTCCAGGCAAC...AATTGTACAGATAGAAAGGTAGTCACACAAGCACCATTTTACCACACTGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR TCA 90 bp | TTCACCAGTGTGGTAAAATGGTGCTTGTGTGACTACCTTTCTATCTGTACAATTGCTTCAAGTTGCAGCTaGACTGTGATTCCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FTSVVKWCLCDYLSICTIASSCS*TVIPVQ Trigger: CTGGACAGGAATCACAGTTCAGCTGCAACTTGAAGC...AATTGTACAGATAGAAAGGTAGTCACACAAGCACCATTTTACCACACTGGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CCA 90 bp | TTCACCAGTGTGGTAAAATGGTGCTTGTGTGACTACCTTTCTATCTGTACAATTTCTTGTTCTTCTGGGTaGAAGGTCCATCCACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: FTSVVKWCLCDYLSICTISCSSG*KVHPLS Trigger: GGACAGTGGATGGACCTTCCACCCAGAAGAACAAGA...AATTGTACAGATAGAAAGGTAGTCACACAAGCACCATTTTACCACACTGGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CCA 90 bp | GACTCTCGATCATCTCTTGGACTCTCAGTTTTTCCTCTGTCTTGTTTGGCTGTTGGTTTTCTGCTGTACTaGCTTTCTATACTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DSRSSLGLSVFPLSCLAVGFLLY*LSILKP Trigger: TGGCTTCAGTATAGAAAGCCAGTACAGCAGAAAACC...AACAGCCAAACAAGACAGAGGAAAAACTGAGAGTCCAAGAGATGATCGAGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CCA 90 bp | CCAGATGCTTCATGGATATCTTTTGAGGAGAAATTCCCGTGTTTGAATCAAGATGGTCACAATCACCTTTaGGAAACCTGTATTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PDASWISFEEKFPCLNQDGHNHL*ETCIQQ Trigger: CTGCTGAATACAGGTTTCCCAAAGGTGATTGTGACC...ATCTTGATTCAAACACGGGAATTTCTCCTCAAAAGATATCCATGAAGCATCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR CAA 72 bp | TTATCATCATCTGGTAAAATGACTCTCGATCATCTCTaGGACTCTCAGTTTTTCCTCTGTCTTGTTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSSSGKMTLDHL*DSQFFLCLVWL Trigger: CAGCCAAACAAGACAGAGGAAAAACTGAGAGTCCAAGAGATGATCGAGAGTCATTTTACCAGATGATGATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| 3UTR CAA 72 bp | GCTTCATGGATATCTTTTGAGGAGAAATTCCCGTGTTaGAATCAAGATAAAACTGGAATAGTTATCATCATC | + |
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Preference number: 4 (lower is better) Translates to: ASWISFEEKFPC*NQDKTGIVIII Trigger: GATGATGATAACTATTCCAGTTTTATCTTGATTCAAACACGGGAATTTCTCCTCAAAAGATATCCATGAAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS TCA 90 bp | GGGTCAGGAACTGGGGCAACCCAGGCACCTCCAGAGACAAGGCCATaGGGTCATAGCGCAGAGTGTGGGGTTCTGCTACCGCCTGTACTC | + |
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Preference number: 5 (lower is better) Translates to: GSGTGATQAPPETRP*GHSAECGVLLPPVL Trigger: GAGTACAGGCGGTAGCAGAACCCCACACTCTGCGCTATGACCTCATGGCCTTGTCTCTGGAGGTGCCTGGGTTGCCCCAGTTCCTGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CCA 90 bp | TTGCACTCCACAGGCTTTTCCCGACCCTGCTTCCCACACCTGAGGTaGGAGGTTGTTCTCTTCTCGCACCATAGACAGGGGCCTCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: LHSTGFSRPCFPHLR*EVVLFSHHRQGPQW Trigger: CCACTGAGGCCCCTGTCTATGGTGCGAGAAGAGAACAACCTCCCACCTCAGGTGTGGGAAGCAGGGTCGGGAAAAGCCTGTGGAGTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS TCA 90 bp | AGTCATTGCACTCCACAGGCTTTTCCCGACCCTGCTTCCCACACCTaGGGTGGGAGGTTGTTCTCTTCTCGCACCATAGACAGGGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SHCTPQAFPDPASHT*GGRLFSSRTIDRGL Trigger: GAGGCCCCTGTCTATGGTGCGAGAAGAGAACAACCTCCCACCTCAGGTGTGGGAAGCAGGGTCGGGAAAAGCCTGTGGAGTGCAATGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CAA 90 bp | AAAAAGAAGAAAAGGCCTCTCACCACTCCTGCCACCTTCTGCTACAGCCCGCAGGCTCTCAGATGGTCTTaGATCCTGGGTTCCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KKKKRPLTTPATFCYSPQALRWS*ILGSWE Trigger: CTCCCAGGAACCCAGGATCAAAGACCATCTGAGAGC...CTGCGGGCTGTAGCAGAAGGTGGCAGGAGTGGTGAGAGGCCTTTTCTTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACTATCTCCCCCAGATGCTTCATGGATATCGCCACCAGTCTTTGGTaGTCACCCTCTGCGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTISPRCFMDIATSLW*SPSAQV Trigger: CACCTGCGCAGAGGGTGACAACCAAAGACTGGTGGC...GATATCCATGAAGCATCTGGGGGAGATAGTGTGTGTGTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS GCA 90 bp | GAAGCCTCTAGTGCTTCCATTTCTTTGAAGCTCACAGCCGAAGGTTaGCTGGAGGATGTGAAGATCCGTATTCTGGCCGTTCTGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: EASSASISLKLTAEG*LEDVKIRILAVLGC Trigger: ACAGCCCAGAACGGCCAGAATACGGATCTTCACATCCTCCAGGCAACCTTCGGCTGTGAGCTTCAAAGAAATGGAAGCACTAGAGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CAA 90 bp | GCAGGAATGTTCACCTGGTCTCTTGCTGTCCTCCTGCGTGTTCTTGCTGCTCTATTGCCGTGCTTCAAGTaGCAGCTGAACTGTGATTCC | + |
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Preference number: 5 (lower is better) Translates to: AGMFTWSLAVLLRVLAALLPCFK*QLNCDS Trigger: GGAATCACAGTTCAGCTGCAACTTGAAGCACGGCAA...TAGAGCAGCAAGAACACGCAGGAGGACAGCAAGAGACCAGGTGAACATTCCTGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CCA 90 bp | AGATCAGCTCTGGGTGCACGTGTCTTCCAGAATGTCTTGTTCTTCTaGGTGGAAGGTCCATCCACTGTCCATGTGAGAGTCTTCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: RSALGARVFQNVLFF*VEGPSTVHVRVFWS Trigger: TGACCAGAAGACTCTCACATGGACAGTGGATGGACCTTCCACCCAGAAGAACAAGACATTCTGGAAGACACGTGCACCCAGAGCTGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CCA 90 bp | CCCACTGGGCAGGATAGTTTCAGATCCAAAGGTTTTCTGCTGTACTaGCTTTCTATACTGAAGCCAGGTCAGGGTGGCCACACGGGTATA | + |
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Preference number: 5 (lower is better) Translates to: PTGQDSFRSKGFLLY*LSILKPGQGGHTGI Trigger: TATACCCGTGTGGCCACCCTGACCTGGCTTCAGTATAGAAAGCCAGTACAGCAGAAAACCTTTGGATCTGAAACTATCCTGCCCAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACACACTATCTCCCCCAGATGCAGTGATCTCAATATCTaGGTAGGGAGCAGAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHTHTISPRCSDLNI*VGSRSH Trigger: GTGGCTTCTGCTCCCTACCAAGATATTGAGATCACT...GCATCTGGGGGAGATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS TCA 90 bp | ATAGTTTCAGATCCAAAGGTTTTCTGCTGTACTGGCTTTCTATACTaGAGCCAGGTCAGGGTGGCCACACGGGTATACAGACGAAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: IVSDPKVFCCTGFLY*SQVRVATRVYRRKA Trigger: GGCTTTTCGTCTGTATACCCGTGTGGCCACCCTGACCTGGCTTCAGTATAGAAAGCCAGTACAGCAGAAAACCTTTGGATCTGAAACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CAA 90 bp | CTCTCGATCATCTCTTGGACTCTCAGTTTTTCCTCTGTCTTGTTTGGCTGTTTGAGTGCTTCCATTTCTTaGAAGCTCACAGCCGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LSIISWTLSFSSVLFGCLSASIS*KLTAEG Trigger: ACCTTCGGCTGTGAGCTTCAAAGAAATGGAAGCACT...CAAACAGCCAAACAAGACAGAGGAAAAACTGAGAGTCCAAGAGATGATCGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS-3UTR CAA 90 bp | CTCTCGATCATCTCTTGGACTCTCAGTTTTTCCTCTGTCTTGTTTGGCTGTTTGGTCTTCCAGAATGTCTaGTTCTTCTGGGTGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LSIISWTLSFSSVLFGCLVFQNV*FFWVEG Trigger: ACCTTCCACCCAGAAGAACAAGACATTCTGGAAGAC...CAAACAGCCAAACAAGACAGAGGAAAAACTGAGAGTCCAAGAGATGATCGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CCA 72 bp | ACAGGCTTTTCCCGACCCTGCTTCCCACACCTGAGGTaGGAGGTTGTTCTCTTCTCGCACCATAGACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGFSRPCFPHLR*EVVLFSHHRQG Trigger: CCCCTGTCTATGGTGCGAGAAGAGAACAACCTCCCACCTCAGGTGTGGGAAGCAGGGTCGGGAAAAGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS TCA 72 bp | ACTCCACAGGCTTTTCCCGACCCTGCTTCCCACACCTaGGGTGGGAGGTTGTTCTCTTCTCGCACCATAGAC | + |
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Preference number: 6 (lower is better) Translates to: TPQAFPDPASHT*GGRLFSSRTID Trigger: GTCTATGGTGCGAGAAGAGAACAACCTCCCACCTCAGGTGTGGGAAGCAGGGTCGGGAAAAGCCTGTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CCA 72 bp | AAGGGCTCATCATCGAAGTATCTCAGGGTCAGGAACTaGGGCAACCCAGGCACCTCCAGAGACAAGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: KGSSSKYLRVRN*GNPGTSRDKAM Trigger: CATGGCCTTGTCTCTGGAGGTGCCTGGGTTGCCCCAGTTCCTGACCCTGAGATACTTCGATGATGAGCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CCA 72 bp | AGTAAATCCTCCAGGAGCAGGTACACTATCCACAGGTaGATCGCAGCTAGGGCTCTGAGGTTCCTGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SKSSRSRYTIHR*IAARALRFLDS Trigger: GCTGTCCAGGAACCTCAGAGCCCTAGCTGCGATCCACCTGTGGATAGTGTACCTGCTCCTGGAGGATTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CAA 72 bp | GTCTCTCTTCCCCAGGTCTCAGCTCTCAGATGGTCTTaGATCCTGGGTTCCTGGGAGTCTGTTATGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSLPQVSALRWS*ILGSWESVMLL Trigger: CAGCAGCATAACAGACTCCCAGGAACCCAGGATCAAAGACCATCTGAGAGCTGAGACCTGGGGAAGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CCA 72 bp | CTGGGTGCACGTGTCTTCCAGAATGTCTTGTTCTTCTaGGTGGAAGGTCCATCCACTGTCCATGTGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: LGARVFQNVLFF*VEGPSTVHVRV Trigger: GACTCTCACATGGACAGTGGATGGACCTTCCACCCAGAAGAACAAGACATTCTGGAAGACACGTGCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CAA 72 bp | GCCCAGTTTCCAGAAGCCTCTAGTGCTTCCATTTCTTaGAAGCTCACAGCCGAAGGTTGCCTGGAGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: AQFPEASSASIS*KLTAEGCLEDV Trigger: CACATCCTCCAGGCAACCTTCGGCTGTGAGCTTCAAAGAAATGGAAGCACTAGAGGCTTCTGGAAACTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CAA 72 bp | AGATCAGCTCTGGGTGCACGTGTCTTCCAGAATGTCTaGTTCTTCTGGGTGGAAGGTCCATCCACTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RSALGARVFQNV*FFWVEGPSTVH Trigger: ATGGACAGTGGATGGACCTTCCACCCAGAAGAACAAGACATTCTGGAAGACACGTGCACCCAGAGCTGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS TCA 72 bp | GATCCAAAGGTTTTCTGCTGTACTGGCTTTCTATACTaGAGCCAGGTCAGGGTGGCCACACGGGTATACAGA | + |
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Preference number: 6 (lower is better) Translates to: DPKVFCCTGFLY*SQVRVATRVYR Trigger: TCTGTATACCCGTGTGGCCACCCTGACCTGGCTTCAGTATAGAAAGCCAGTACAGCAGAAAACCTTTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS GCA 72 bp | AGTGCTTCCATTTCTTTGAAGCTCACAGCCGAAGGTTaGCTGGAGGATGTGAAGATCCGTATTCTGGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: SASISLKLTAEG*LEDVKIRILAV Trigger: AACGGCCAGAATACGGATCTTCACATCCTCCAGGCAACCTTCGGCTGTGAGCTTCAAAGAAATGGAAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CCA 72 bp | CAGGATAGTTTCAGATCCAAAGGTTTTCTGCTGTACTaGCTTTCTATACTGAAGCCAGGTCAGGGTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: QDSFRSKGFLLY*LSILKPGQGGH Trigger: GTGGCCACCCTGACCTGGCTTCAGTATAGAAAGCCAGTACAGCAGAAAACCTTTGGATCTGAAACTATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CAA 72 bp | CTGTACTCTAGGCTTCTCCAGAGTGATCTCAATATCTaGGTAGGGAGCAGAAGCCACCAGTCTTTGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LYSRLLQSDLNI*VGSRSHQSLVV Trigger: GACAACCAAAGACTGGTGGCTTCTGCTCCCTACCAAGATATTGAGATCACTCTGGAGAAGCCTAGAGTACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS CAA 72 bp | GCAGGTTCATTGATATTGTGGTTGCCGTGCTTCAAGTaGCAGCTGAACTGTGATTCCTGTCCAGGAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: AGSLILWLPCFK*QLNCDSCPGRT Trigger: GGTTCTTCCTGGACAGGAATCACAGTTCAGCTGCAACTTGAAGCACGGCAACCACAATATCAATGAACCTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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| CDS TCA 72 bp | AGACCATTTCTCAAGGAAGCAAGGTATCTCTGGAGCTaGGCAGGACATATGTCATCCAAGAATGTCTTAACT | + |
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Preference number: 6 (lower is better) Translates to: RPFLKEARYLWS*AGHMSSKNVLT Trigger: AGTTAAGACATTCTTGGATGACATATGTCCTGCTCAGCTCCAGAGATACCTTGCTTCCTTGAGAAATGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066780.5 |
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