Pregenerated sensors for MIIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029022Ensembl transcript IDs: ENSMUST00000030886.15, ENSMUST00000119975.3, ENSMUST00000172710.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTaGGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: FQYLSKQRGQWRRDS*ATSIFSTSSSQGLL Trigger: GAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGAGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGACTGGTAGAATACTGTaGTCTTCTGGGCCGTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: AEPPPSSPLPALRGFSSGTGRIL*SSGPSV Trigger: GACAGACGGCCCAGAAGACAACAGTATTCTACCAGT...CCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| 3UTR-3UTR CAA 90 bp | ACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCCCACCTCAGGGGAGGCTGTaGGCACTGGTAGAATACTGT | + |
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Preference number: 3 (lower is better) Translates to: TLSFISTLLRALPPLCTPPQGRL*ALVEYC Trigger: ACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGG...TGGGGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| 3UTR-3UTR CAA 90 bp | TGTAGGACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCCCTCAGGGGAGGCTGTaGGCACTGGTAGAATACTGT | + |
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Preference number: 3 (lower is better) Translates to: CRTLSFISTLLRALPPLCPQGRL*ALVEYC Trigger: ACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGG...GCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGTCCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| 3UTR TCA 72 bp | CTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTaGGCCACCTCCATCTTCTCCACTTCCAGCTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LSKQRGQWRRDS*ATSIFSTSSSQ Trigger: CTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTACTGGTAGAATACTGTaGTCTTCTGGGCCGTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SVNRGDNGGETAEPPPSSTGRIL*SSGPSV Trigger: GACAGACGGCCCAGAAGACAACAGTATTCTACCAGT...AGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | CTGAGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGGGCAACCTGGGGCTCTaGCCAGAGAGGTGGTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LSHLHLLHFQLSGASPQGGNLGL*PERWCD Trigger: GTCACACCACCTCTCTGGTCAGAGCCCCAGGTTGCC...CCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | AGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGACCAGAGAGGTGGTGTaGCCTGTGCTGGCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SHLHLLHFQLSGASPQGRTREVV*PVLARP Trigger: AGGCCTTGCCAGCACAGGTCACACCACCTCTCTGGT...CCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | GCTGAGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGCCACCGACCGACACATaGCTTCGTGCCCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: AEPPPSSPLPALRGFSSGPPTDT*LRAQPK Trigger: TTTGGGCTGGGCACGAAGCCATGTGTCGGTCGGTGG...CCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | CTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGCTGTTGTGGGAGGGACAGAGCTaGGCAACCTGGGGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LHLLHFQLSGASPQGRLLWEGQS*ATWGSD Trigger: GTCAGAGCCCCAGGTTGCCCAGCTCTGTCCCTCCCA...CAACAGCCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | CCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGCTGTTACCAGAGAGGTGGTGTaGCCTGTGCTGGCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PPSSPLPALRGFSSGEAVTREVV*PVLARP Trigger: AGGCCTTGCCAGCACAGGTCACACCACCTCTCTGGT...AACAGCCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | CCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGCTTTTTGTCCTGTGAGCTaGGGGCCACTGAGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PPPSSPLPALRGFSSGEAFCPVS*GPLRKR Trigger: CCGCTTCCTCAGTGGCCCCCAGCTCACAGGACAAAA...AGCCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | ACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGCTGTGGTGTGGAGGGTCCATaGTGGATAGGGGGATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TSIFSTSSSQGLLLRGGCGVEGP*WIGGCS Trigger: TGAGCATCCCCCTATCCATCATGGACCCTCCACACC...ACAGCCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | TGTAGGACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCGGCAACCTGGGGCTCTaGCCAGAGAGGTGGTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: CRTLSFISTLLRALPPLCGNLGL*PERWCD Trigger: GTCACACCACCTCTCTGGTCAGAGCCCCAGGTTGCC...GCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGTCCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | AGGACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCTGTCCTCTGGGCTTCTaGCAGGGTGGGCTAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RTLSFISTLLRALPPLCTCPLGF*QGGLVA Trigger: AGCCACTAGCCCACCCTGTCAGAAGCCCAGAGGACA...GGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119975.3 |
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| CDS-3UTR GCA 90 bp | GAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTCCAGCCTCTTCCACACCGCTaGTCTCTTGCAGGCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: EGTMEERQLSHLHLLHFQPLPHR*SLAGLG Trigger: TCCCAGGCCTGCAAGAGAGCAGCGGTGTGGAAGAGG...CTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | GGGGCTTCTCCTCAGGGGAGGCTGTTGGCACTGGTAGAATACTGTTGTCTTCTGTGGGAGGGACAGAGCTaGGCAACCTGGGGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: GASPQGRLLALVEYCCLLWEGQS*ATWGSD Trigger: GTCAGAGCCCCAGGTTGCCCAGCTCTGTCCCTCCCA...CAGAAGACAACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGGAGAAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | ACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCCCAGGTGTGGAGGGTCCATaGTGGATAGGGGGATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TLSFISTLLRALPPLCTPGVEGP*WIGGCS Trigger: TGAGCATCCCCCTATCCATCATGGACCCTCCACACC...TGGGGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTCCACCTCTTCCACACCGCTaGTCTCTTGCAGGCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RGDNGGETAEPPPSSPLPPLPHR*SLAGLG Trigger: TCCCAGGCCTGCAAGAGAGCAGCGGTGTGGAAGAGG...TGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | GGGGCTTCTCCTCAGGGGAGGCTGTTGGCACTGGTAGAATACTGTTGTCTTCTGGGCCGTAGTTCTTCCTaGGGCTCCTGGTGTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GASPQGRLLALVEYCCLLGRSSS*GSWCWP Trigger: AGGCCAACACCAGGAGCCCCAGGAAGAACTACGGCC...CAGAAGACAACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGGAGAAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | GCTGAGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGAGAGGTCCAGGCTCTTaGGGACAGACGTTTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: AEPPPSSPLPALRGFSSGRGPGS*GQTFSL Trigger: CAGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCT...CCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTCCATGCCCAGCCCAAAGCTaGTTCAGGAGCTCCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: RGDNGGETAEPPPSSPLPCPAQS*FRSSRL Trigger: TAGCCTGGAGCTCCTGAAGCAGCTTTGGGCTGGGCA...TGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | CTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCCCATTTCCACCGACCGACACATaGCTTCGTGCCCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LSFISTLLRALPPLCTPFPPTDT*LRAQPK Trigger: TTTGGGCTGGGCACGAAGCCATGTGTCGGTCGGTGG...AAATGGGGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| 3UTR CAA 72 bp | TTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGCTGTaGGCACTGGTAGAATACTGTTGTCTTCTGGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: FQLSGASPQGRL*ALVEYCCLLGR Trigger: ACGGCCCAGAAGACAACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | GTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCAGGTGTGGAGGGTCCATaGTGGATAGGGGGATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VNRGDNGGETAEPPPSSPGVEGP*WIGGCS Trigger: TGAGCATCCCCCTATCCATCATGGACCCTCCACACC...TGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | GTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCATGCCCAGCCCAAAGCTaGTTCAGGAGCTCCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: VNRGDNGGETAEPPPSSPCPAQS*FRSSRL Trigger: TAGCCTGGAGCTCCTGAAGCAGCTTTGGGCTGGGCA...TGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | AACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTTGCCCAGCCCAAAGCTaGTTCAGGAGCTCCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: NRGDNGGETAEPPPSSPLCPAQS*FRSSRL Trigger: TAGCCTGGAGCTCCTGAAGCAGCTTTGGGCTGGGCA...AAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | GGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTCCAGCTATGCTCACCCTGACTTaGACTGGCTCCACCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: GDNGGETAEPPPSSPLPAMLTLT*TGSTRV Trigger: AACTCTGGTGGAGCCAGTGCAAGTCAGGGTGAGCAT...AGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | CTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCCCATTTTTTTGTCCTGTGAGCTaGGGGCCACTGAGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSFISTLLRALPPLCTPFFCPVS*GPLRKR Trigger: CCGCTTCCTCAGTGGCCCCCAGCTCACAGGACAAAA...AAATGGGGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAG 56% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | ACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGTGTGCTGGCAAGGCCTaGCAGGGTGGGCTAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TPFPTFSISVNRGDNGGECAGKA*QGGLVA Trigger: AGCCACTAGCCCACCCTGTCAGGCCTTGCCAGCACA...CTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR TCA 90 bp | TGCACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGATGTGCTGGCAAGGCCTaGCAGGGTGGGCTAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CTPFPTFSISVNRGDNGGCAGKA*QGGLVA Trigger: AGCCACTAGCCCACCCTGTCAGGCCTTGCCAGCACA...TCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | ATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTTTTGTCCTGTGAGCTaGGGGCCACTGAGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: ISVNRGDNGGETAEPPPSFCPVS*GPLRKR Trigger: CCGCTTCCTCAGTGGCCCCCAGCTCACAGGACAAAA...AGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | CCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGCTGTTCAGCTTCAGGGGAGTTaGAAACACAATCCTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: PPSSPLPALRGFSSGEAVQLQGS*KHNPLC Trigger: ACAAAGAGGATTGTGTTTGCAACTCCCCTGAAGCTG...AACAGCCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | TGCACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGACCTCTTCCACACCGCTaGTCTCTTGCAGGCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: CTPFPTFSISVNRGDNGGPLPHR*SLAGLG Trigger: TCCCAGGCCTGCAAGAGAGCAGCGGTGTGGAAGAGG...TCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | AACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTATGCTCACCCTGACTTaGACTGGCTCCACCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: NRGDNGGETAEPPPSSPLMLTLT*TGSTRV Trigger: AACTCTGGTGGAGCCAGTGCAAGTCAGGGTGAGCAT...AAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | ACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCACCGACCGACACATaGCTTCGTGCCCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TFSISVNRGDNGGETAEPPPTDT*LRAQPK Trigger: TTTGGGCTGGGCACGAAGCCATGTGTCGGTCGGTGG...TGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | CTCTGCACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGCCGTAGTTCTTCCTaGGGCTCCTGGTGTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LCTPFPTFSISVNRGDNGGRSSS*GSWCWP Trigger: AGGCCAACACCAGGAGCCCCAGGAAGAACTACGGCC...TCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | ACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACGGCAAGGGGCGCCTaGATCCACAGGCTCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TPFPTFSISVNRGDNGGETARGA*IHRLRK Trigger: TTTCCTGAGCCTGTGGATCCAGGCGCCCCTTGCCGT...CTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | TGCACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAACGGCAAGGGGCGCCTaGATCCACAGGCTCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: CTPFPTFSISVNRGDNGGTARGA*IHRLRK Trigger: TTTCCTGAGCCTGTGGATCCAGGCGCCCCTTGCCGT...TCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | GCTGAGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGCATCTCTAAGTTGTTaGTGCTACAATCCAAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: AEPPPSSPLPALRGFSSGASLSC*CYNPSL Trigger: CAAACTTGGATTGTAGCAGCAACAACTTAGAGATGC...CCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | GAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTCCAGTTTTCTCGAAACCTCTaGAGCATAGAGAAGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: EGTMEERQLSHLHLLHFQFSRNL*SIEKKA Trigger: GGCCTTCTTCTCTATGCTGCAGAGGTTTCGAGAAAA...CTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | GAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTCCAGCAGCTTCAGGGGAGTTaGAAACACAATCCTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: EGTMEERQLSHLHLLHFQQLQGS*KHNPLC Trigger: ACAAAGAGGATTGTGTTTGCAACTCCCCTGAAGCTG...CTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | CCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAACGGCAAGGGGCGCCTaGATCCACAGGCTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFPTFSISVNRGDNGGETTARGA*IHRLRK Trigger: TTTCCTGAGCCTGTGGATCCAGGCGCCCCTTGCCGT...TGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | TCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTAGAGGTCCAGGCTCTTaGGGACAGACGTTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVNRGDNGGETAEPPPSSRGPGS*GQTFSL Trigger: CAGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCT...AGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | CCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGAGAGGTCCAGGCTCTTaGGGACAGACGTTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTFSISVNRGDNGGETAERGPGS*GQTFSL Trigger: CAGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCT...CTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | GTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCATTTTCTCGAAACCTCTaGAGCATAGAGAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNRGDNGGETAEPPPSSPFSRNL*SIEKKA Trigger: GGCCTTCTTCTCTATGCTGCAGAGGTTTCGAGAAAA...TGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR GCA 90 bp | CTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCCCATTTCAGCTTCAGGGGAGTTaGAAACACAATCCTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSFISTLLRALPPLCTPFQLQGS*KHNPLC Trigger: ACAAAGAGGATTGTGTTTGCAACTCCCCTGAAGCTG...AAATGGGGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAATGCTCACCCTGACTTaGACTGGCTCCACCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PFPTFSISVNRGDNGGETMLTLT*TGSTRV Trigger: AACTCTGGTGGAGCCAGTGCAAGTCAGGGTGAGCAT...TGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | ATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCGCGGAAGAAGTCTCTTaGGACAGTGGCATCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISHFQYLSKQRGQWRRDSAEEVS*DSGISK Trigger: CTTAGAGATGCCACTGTCCCAAGAGACTTCTTCCGC...GCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CCA 90 bp | CCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCGGAAGAAGTCTCTTaGGACAGTGGCATCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFPTFSISVNRGDNGGETAEEVS*DSGISK Trigger: CTTAGAGATGCCACTGTCCCAAGAGACTTCTTCCGC...TGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
||
| CDS-3UTR GCA 90 bp | TGCACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGATTTTCTCGAAACCTCTaGAGCATAGAGAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTPFPTFSISVNRGDNGGFSRNL*SIEKKA Trigger: GGCCTTCTTCTCTATGCTGCAGAGGTTTCGAGAAAA...TCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGCATCTCTAAGTTGTTaGTGCTACAATCCAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPISHFQYLSKQRGQWRRASLSC*CYNPSL Trigger: CAAACTTGGATTGTAGCAGCAACAACTTAGAGATGC...TCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS TCA 90 bp | CACGGAGGACCAGAGGTCCAGGCTCTTGGGGACAGACGTTTTCTCTaGCTTTGGAGGGAGGATGTCCCAGCCCAGCAGACAGTGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGGPEVQALGDRRFL*LWREDVPAQQTVPR Trigger: CCTCGGCACTGTCTGCTGGGCTGGGACATCCTCCCTCCAAAGTCAGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCTGGTCCTCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 90 bp | TTTGACCCTGATGCTGCTCTCACCACCGACCGACACATGGCTTCGTaGCCAGCCCAAAGCTGCTTCAGGAGCTCCAGGCTAAGCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FDPDAALTTDRHMAS*PAQSCFRSSRLSSR Trigger: TCGGCTGCTTAGCCTGGAGCTCCTGAAGCAGCTTTGGGCTGGGCACGAAGCCATGTGTCGGTCGGTGGTGAGAGCAGCATCAGGGTCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CCA 90 bp | GCTGCCCTGCTCCATAGGACACGGAGGACCAGAGGTCCAGGCTCTTaGGGACAGACGTTTTCTCTGACTTTGGAGGGAGGATGTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AALLHRTRRTRGPGS*GQTFSLTLEGGCPS Trigger: GCTGGGACATCCTCCCTCCAAAGTCAGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCTGGTCCTCCGTGTCCTATGGAGCAGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
||
| CDS-3UTR CAA 90 bp | AGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGTCCAACATGTGTCTTTaGTCCTGTGAGCTGGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHLHLLHFQLSGASPQGRSNMCL*SCELGA Trigger: GGCCCCCAGCTCACAGGACAAAAGACACATGTTGGA...CCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | CCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGGCTGTTGATGCTCACCCTGACTaGCACTGGCTCCACCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPSSPLPALRGFSSGEAVDAHPD*HWLHQS Trigger: ACTCTGGTGGAGCCAGTGCAAGTCAGGGTGAGCATC...AACAGCCTCCCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS CCA 90 bp | AGGTATGGCCTAGAGTGCCAGCTGCTCTCAGGCACTGCAGACTCCTaGGAGGTCACTCTGGGCTTAGATGGCTTGCTTAGTCGTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RYGLECQLLSGTADS*EVTLGLDGLLSRDR Trigger: CCTGTCACGACTAAGCAAGCCATCTAAGCCCAGAGTGACCTCCCAGGAGTCTGCAGTGCCTGAGAGCAGCTGGCACTCTAGGCCATACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | GCTGAGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTCAGGGGAGTCCATCCTGGAGTaGAACTTGACATACCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEPPPSSPLPALRGFSSGESILE*NLTYQA Trigger: GGCCTGGTATGTCAAGTTCAACTCCAGGATGGACTC...CCCTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | ACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCCCATCCAACATGTGTCTTTaGTCCTGTGAGCTGGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSFISTLLRALPPLCTPSNMCL*SCELGA Trigger: GGCCCCCAGCTCACAGGACAAAAGACACATGTTGGA...TGGGGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | GGGGCTTCTCCTCAGGGGAGGCTGTTGGCACTGGTAGAATACTGTTGTCTTCTGGATGCTCACCCTGACTaGCACTGGCTCCACCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GASPQGRLLALVEYCCLLDAHPD*HWLHQS Trigger: ACTCTGGTGGAGCCAGTGCAAGTCAGGGTGAGCATC...CAGAAGACAACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGGAGAAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | ACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCCCACAGAGGTCCAGGCTCTaGGGGACAGACGTTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLSFISTLLRALPPLCTPQRSRL*GTDVFS Trigger: AGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCTG...TGGGGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | ATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGCTGGGCTTAGATGGCTaGCTTAGTCGTGACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MEERQLSHLHLLHFQLSGLGLDG*LSRDRM Trigger: CATCCTGTCACGACTAAGCAAGCCATCTAAGCCCAG...CCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | AGGACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCACCACGTTTTCTCTGACTTaGGAGGGAGGATGTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTLSFISTLLRALPPLCTTFSLT*EGGCPS Trigger: GCTGGGACATCCTCCCTCCAAAGTCAGAGAAAACGT...GGTGCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | AGACAGCTGAGCCACCTCCATCTTCTCCACTTCCAGCTCTCAGGGGCTTCTCCTACGTTTTCTCTGACTTaGGAGGGAGGATGTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQLSHLHLLHFQLSGASPTFSLT*EGGCPS Trigger: GCTGGGACATCCTCCCTCCAAAGTCAGAGAAAACGT...AGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | TGTAGGACCCTGAGCTTTATTAGCACGCTACTCAGAGCACTCCCTCCCCTCTGCCAGAGGTCCAGGCTCTaGGGGACAGACGTTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRTLSFISTLLRALPPLCQRSRL*GTDVFS Trigger: AGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCTG...GCAGAGGGGAGGGAGTGCTCTGAGTAGCGTGCTAATAAAGCTCAGGGTCCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | GGGGCTTCTCCTCAGGGGAGGCTGTTGGCACTGGTAGAATACTGTTGTCTTCTGCAGAGGTCCAGGCTCTaGGGGACAGACGTTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GASPQGRLLALVEYCCLLQRSRL*GTDVFS Trigger: AGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCTG...CAGAAGACAACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGGAGAAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | GGGGCTTCTCCTCAGGGGAGGCTGTTGGCACTGGTAGAATACTGTTGTCTTCTGACGTTTTCTCTGACTTaGGAGGGAGGATGTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GASPQGRLLALVEYCCLLTFSLT*EGGCPS Trigger: GCTGGGACATCCTCCCTCCAAAGTCAGAGAAAACGT...CAGAAGACAACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGGAGAAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | GAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCACTTCCAGACTGGTAGAATACTGTaGTCTTCTGGGCCGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGTMEERQLSHLHLLHFQTGRIL*SSGPSV Trigger: GACAGACGGCCCAGAAGACAACAGTATTCTACCAGT...CTGGAAGTGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119975.3 |
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| CDS-3UTR CAA 90 bp | GTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCACCTCCATCTTCTCCAGAGTCCATCCTGGAGTaGAACTTGACATACCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VNRGDNGGETAEPPPSSPESILE*NLTYQA Trigger: GGCCTGGTATGTCAAGTTCAACTCCAGGATGGACTC...TGGAGAAGATGGAGGTGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | CCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGGATGCTCACCCTGACTaGCACTGGCTCCACCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PTFSISVNRGDNGGETAEDAHPD*HWLHQS Trigger: ACTCTGGTGGAGCCAGTGCAAGTCAGGGTGAGCATC...CTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 90 bp | GTTTTCTCTGACTTTGGAGGGAGGATGTCCCAGCCCAGCAGACAGTaGCGAGGCAAAGCTAGAGTGTCAGATGCATCAAAGCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFSDFGGRMSQPSRQ*RGKARVSDASKLFL Trigger: AAGGAAGAGCTTTGATGCATCTGACACTCTAGCTTTGCCTCGGCACTGTCTGCTGGGCTGGGACATCCTCCCTCCAAAGTCAGAGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGCACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGGTGACAGGATGGACCTaGGGACCTGTGTCTTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLHPISHFQYLSKQRGQWVTGWT*GPVSCQ Trigger: CTGACAAGACACAGGTCCCAAGGTCCATCCTGTCAC...CCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGTGCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CCA 90 bp | TTGTCCTGTGAGCTGGGGGCCACTGAGGAAGCGGAAGAAGTCTCTTaGGACAGTGGCATCTCTAAGTTGTTGCTGCTACAATCCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSCELGATEEAEEVS*DSGISKLLLLQSKF Trigger: AAACTTGGATTGTAGCAGCAACAACTTAGAGATGCCACTGTCCCAAGAGACTTCTTCCGCTTCCTCAGTGGCCCCCAGCTCACAGGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | ACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTGAGCCAGTGACAGGATGGACCTaGGGACCTGTGTCTTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TFSISVNRGDNGGETAEPVTGWT*GPVSCQ Trigger: CTGACAAGACACAGGTCCCAAGGTCCATCCTGTCAC...TGGCTCAGCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS TCA 90 bp | CGAGGCAAAGCTAGAGTGTCAGATGCATCAAAGCTCTTCCTTCTGTaGATTCGATACTGGTGTGGAGGGTCCATGATGGATAGGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RGKARVSDASKLFLL*IRYWCGGSMMDRGM Trigger: CATCCCCCTATCCATCATGGACCCTCCACACCAGTATCGAATTCACAGAAGGAAGAGCTTTGATGCATCTGACACTCTAGCTTTGCCTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 90 bp | GGGGAGTTGCAAACACAATCCTCTTTGTTGTTTTCTCGAAACCTCTaGAGCATAGAGAAGAAGGCCTCGGGCTCACTAGTGACTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GELQTQSSLLFSRNL*SIEKKASGSLVTGE Trigger: CTCTCCAGTCACTAGTGAGCCCGAGGCCTTCTTCTCTATGCTGCAGAGGTTTCGAGAAAACAACAAAGAGGATTGTGTTTGCAACTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGCTCCAACATGTGTCTTTaGTCCTGTGAGCTGGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISHFQYLSKQRGQWRRDSSNMCL*SCELGA Trigger: GGCCCCCAGCTCACAGGACAAAAGACACATGTTGGA...GCTGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACAGTGACAGGATGGACCTaGGGACCTGTGTCTTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFPTFSISVNRGDNGGETVTGWT*GPVSCQ Trigger: CTGACAAGACACAGGTCCCAAGGTCCATCCTGTCAC...TGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS-3UTR CAA 90 bp | CTCTGCACCCCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGACTGGGCTTAGATGGCTaGCTTAGTCGTGACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LCTPFPTFSISVNRGDNGLGLDG*LSRDRM Trigger: CATCCTGTCACGACTAAGCAAGCCATCTAAGCCCAG...TCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGGGGTGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTCCCACTTTCAGTATCTCAGTAAACAGAGGGGACAATGGAGGAGAGACACTGGGCTTAGATGGCTaGCTTAGTCGTGACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PFPTFSISVNRGDNGGETLGLDG*LSRDRM Trigger: CATCCTGTCACGACTAAGCAAGCCATCTAAGCCCAG...TGTCTCTCCTCCATTGTCCCCTCTGTTTACTGAGATACTGAAAGTGGGAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
||
| CDS TCA 72 bp | CTGTGCTGGCAAGGCCTGACAGGGTGGGCTAGTGGCTaGCAGATCCCGACGCTGCCCTGCTCCATAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LCWQGLTGWASG*QIPTLPCSIGH Trigger: GTGTCCTATGGAGCAGGGCAGCGTCGGGATCTGTCAGCCACTAGCCCACCCTGTCAGGCCTTGCCAGCACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030886.15 ENSMUST00000172710.8 |
||
| CDS CCA 72 bp | ATCCCGGGGTATCCCACACAGACGGCAAGGGGCGCCTaGATCCACAGGCTCAGGAAACAGCCGGCGGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: IPGYPTQTARGA*IHRLRKQPAVD Trigger: ATCAACCGCCGGCTGTTTCCTGAGCCTGTGGATCCAGGCGCCCCTTGCCGTCTGTGTGGGATACCCCGGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
||
| CDS GCA 72 bp | GGGTCCATGATGGATAGGGGGATGCTCACCCTGACTTaGACTGGCTCCACCAGAGTTCCGGGGCCCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSMMDRGMLTLT*TGSTRVPGPFS Trigger: TGAGAAGGGCCCCGGAACTCTGGTGGAGCCAGTGCAAGTCAGGGTGAGCATCCCCCTATCCATCATGGACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 90 bp | AGGGGCTTCTCCTCAGGGGAGGCTGTTGGCACTGGTAGAATACTGTaGTCTTCTGGGCCGTCTGTCCTCTGGGCTTCTGACAGGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGFSSGEAVGTGRIL*SSGPSVLWASDRVG Trigger: GCCCACCCTGTCAGAAGCCCAGAGGACAGACGGCCCAGAAGACAACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGGAGAAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119975.3 |
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| CDS CCA 72 bp | TTGACCCTGATGCTGCTCTCACCACCGACCGACACATaGCTTCGTGCCCAGCCCAAAGCTGCTTCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LTLMLLSPPTDT*LRAQPKAASGA Trigger: AGCTCCTGAAGCAGCTTTGGGCTGGGCACGAAGCCATGTGTCGGTCGGTGGTGAGAGCAGCATCAGGGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS TCA 72 bp | CCAGAGGTCCAGGCTCTTGGGGACAGACGTTTTCTCTaGCTTTGGAGGGAGGATGTCCCAGCCCAGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: PEVQALGDRRFL*LWREDVPAQQT Trigger: TGTCTGCTGGGCTGGGACATCCTCCCTCCAAAGTCAGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CCA 72 bp | CCTTGGGACCTGTGTCTTGTCAGGTCCCAGACCTTTTaGTCCTCCCAAAGACACTGGCCCCTTCAGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: PWDLCLVRSQTF*SSQRHWPLQTL Trigger: CAGGGTCTGAAGGGGCCAGTGTCTTTGGGAGGACCAAAAGGTCTGGGACCTGACAAGACACAGGTCCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 90 bp | ACAGGATGGACCTTGGGACCTGTGTCTTGTCAGGTCCCAGACCTTTaGGTCCTCCCAAAGACACTGGCCCCTTCAGACCCTGAGTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: TGWTLGPVSCQVPDL*VLPKTLAPSDPEWL Trigger: TAGCCACTCAGGGTCTGAAGGGGCCAGTGTCTTTGGGAGGACCAAAAGGTCTGGGACCTGACAAGACACAGGTCCCAAGGTCCATCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 90 bp | GATGGCTTGCTTAGTCGTGACAGGATGGACCTTGGGACCTGTGTCTaGTCAGGTCCCAGACCTTTTGGTCCTCCCAAAGACACTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: DGLLSRDRMDLGTCV*SGPRPFGPPKDTGP Trigger: GGGGCCAGTGTCTTTGGGAGGACCAAAAGGTCTGGGACCTGACAAGACACAGGTCCCAAGGTCCATCCTGTCACGACTAAGCAAGCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 72 bp | ATACACTCGTGGTCCTCTTCCACACCGCTGCTCTCTTaGAGGCCTGGGAACACAGCTTCAGGGGAGTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: IHSWSSSTPLLS*RPGNTASGELQ Trigger: TTGCAACTCCCCTGAAGCTGTGTTCCCAGGCCTGCAAGAGAGCAGCGGTGTGGAAGAGGACCACGAGTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 72 bp | AACAGTACATACACTCGTGGTCCTCTTCCACACCGCTaGTCTCTTGCAGGCCTGGGAACACAGCTTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: NSTYTRGPLPHR*SLAGLGTQLQG Trigger: CCCCTGAAGCTGTGTTCCCAGGCCTGCAAGAGAGCAGCGGTGTGGAAGAGGACCACGAGTGTATGTACTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CCA 72 bp | CTAGAGTGCCAGCTGCTCTCAGGCACTGCAGACTCCTaGGAGGTCACTCTGGGCTTAGATGGCTTGCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: LECQLLSGTADS*EVTLGLDGLLS Trigger: ACTAAGCAAGCCATCTAAGCCCAGAGTGACCTCCCAGGAGTCTGCAGTGCCTGAGAGCAGCTGGCACTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CCA 72 bp | GTGGTCCTCTTCCACACCGCTGCTCTCTTGCAGGCCTaGGAACACAGCTTCAGGGGAGTTGCAAACACAATC | + |
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Preference number: 6 (lower is better) Translates to: VVLFHTAALLQA*EHSFRGVANTI Trigger: GATTGTGTTTGCAACTCCCCTGAAGCTGTGTTCCCAGGCCTGCAAGAGAGCAGCGGTGTGGAAGAGGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CCA 72 bp | CTCCATAGGACACGGAGGACCAGAGGTCCAGGCTCTTaGGGACAGACGTTTTCTCTGACTTTGGAGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LHRTRRTRGPGS*GQTFSLTLEGG Trigger: TCCTCCCTCCAAAGTCAGAGAAAACGTCTGTCCCCAAGAGCCTGGACCTCTGGTCCTCCGTGTCCTATGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | TCTCGACGACTGTCCAGTGGGTCCAACATGTGTCTTTaGTCCTGTGAGCTGGGGGCCACTGAGGAAGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: SRRLSSGSNMCL*SCELGATEEAE Trigger: TTCCGCTTCCTCAGTGGCCCCCAGCTCACAGGACAAAAGACACATGTTGGACCCACTGGACAGTCGTCGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | ACCTTGGGACCTGTGTCTTGTCAGGTCCCAGACCTTTaGGTCCTCCCAAAGACACTGGCCCCTTCAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: TLGPVSCQVPDL*VLPKTLAPSDP Trigger: AGGGTCTGAAGGGGCCAGTGTCTTTGGGAGGACCAAAAGGTCTGGGACCTGACAAGACACAGGTCCCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | GCAGACTCCTGGGAGGTCACTCTGGGCTTAGATGGCTaGCTTAGTCGTGACAGGATGGACCTTGGGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: ADSWEVTLGLDG*LSRDRMDLGTC Trigger: ACAGGTCCCAAGGTCCATCCTGTCACGACTAAGCAAGCCATCTAAGCCCAGAGTGACCTCCCAGGAGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | TCCTCAGGGGAGGCTGTTGGCACTGGTAGAATACTGTaGTCTTCTGGGCCGTCTGTCCTCTGGGCTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SSGEAVGTGRIL*SSGPSVLWASD Trigger: GTCAGAAGCCCAGAGGACAGACGGCCCAGAAGACAACAGTATTCTACCAGTGCCAACAGCCTCCCCTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119975.3 |
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| CDS CAA 90 bp | TCAGGCACTGCAGACTCCTGGGAGGTCACTCTGGGCTTAGATGGCTaGCTTAGTCGTGACAGGATGGACCTTGGGACCTGTGTCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SGTADSWEVTLGLDG*LSRDRMDLGTCVLS Trigger: TGACAAGACACAGGTCCCAAGGTCCATCCTGTCACGACTAAGCAAGCCATCTAAGCCCAGAGTGACCTCCCAGGAGTCTGCAGTGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS TCA 72 bp | CGCCTGGATCCACAGGCTCAGGAAACAGCCGGCGGTTaGTACGGTAACAGTACATACACTCGTGGTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RLDPQAQETAGG*YGNSTYTRGPL Trigger: AAGAGGACCACGAGTGTATGTACTGTTACCGTATCAACCGCCGGCTGTTTCCTGAGCCTGTGGATCCAGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 72 bp | GACTTTGGAGGGAGGATGTCCCAGCCCAGCAGACAGTaGCGAGGCAAAGCTAGAGTGTCAGATGCATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DFGGRMSQPSRQ*RGKARVSDASK Trigger: CTTTGATGCATCTGACACTCTAGCTTTGCCTCGGCACTGTCTGCTGGGCTGGGACATCCTCCCTCCAAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 90 bp | AACGTGTCATCTCGACGACTGTCCAGTGGGTCCAACATGTGTCTTTaGTCCTGTGAGCTGGGGGCCACTGAGGAAGCGGAAGAAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NVSSRRLSSGSNMCL*SCELGATEEAEEVS Trigger: AGAGACTTCTTCCGCTTCCTCAGTGGCCCCCAGCTCACAGGACAAAAGACACATGTTGGACCCACTGGACAGTCGTCGAGATGACACGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CCA 72 bp | GAGCTGGGGGCCACTGAGGAAGCGGAAGAAGTCTCTTaGGACAGTGGCATCTCTAAGTTGTTGCTGCTACAA | + |
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Preference number: 6 (lower is better) Translates to: ELGATEEAEEVS*DSGISKLLLLQ Trigger: TTGTAGCAGCAACAACTTAGAGATGCCACTGTCCCAAGAGACTTCTTCCGCTTCCTCAGTGGCCCCCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CCA 72 bp | CAGCATAGAGAAGAAGGCCTCGGGCTCACTAGTGACTaGAGAGCTATTGTCCAGGGACCCTGCAATCCAATC | + |
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Preference number: 6 (lower is better) Translates to: QHREEGLGLTSD*RAIVQGPCNPI Trigger: GATTGGATTGCAGGGTCCCTGGACAATAGCTCTCCAGTCACTAGTGAGCCCGAGGCCTTCTTCTCTATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | CTTAGTCGTGACAGGATGGACCTTGGGACCTGTGTCTaGTCAGGTCCCAGACCTTTTGGTCCTCCCAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSRDRMDLGTCV*SGPRPFGPPKD Trigger: GTCTTTGGGAGGACCAAAAGGTCTGGGACCTGACAAGACACAGGTCCCAAGGTCCATCCTGTCACGACTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 90 bp | TCCTGGTGTTGGCCTGTGGCAGGTAGGAAAGAGTCCATCCTGGAGTaGAACTTGACATACCAGGCCACATCAAACGTGTCATCTCGACGA | + |
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Preference number: 6 (lower is better) Translates to: SWCWPVAGRKESILE*NLTYQATSNVSSRR Trigger: TCGTCGAGATGACACGTTTGATGTGGCCTGGTATGTCAAGTTCAACTCCAGGATGGACTCTTTCCTACCTGCCACAGGCCAACACCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 90 bp | GAGGAAGCGGAAGAAGTCTCTTGGGACAGTGGCATCTCTAAGTTGTaGCTGCTACAATCCAAGTTTGACCCTGATGCTGCTCTCACCACC | + |
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Preference number: 6 (lower is better) Translates to: EEAEEVSWDSGISKL*LLQSKFDPDAALTT Trigger: GGTGGTGAGAGCAGCATCAGGGTCAAACTTGGATTGTAGCAGCAACAACTTAGAGATGCCACTGTCCCAAGAGACTTCTTCCGCTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 90 bp | CCTGGGAACACAGCTTCAGGGGAGTTGCAAACACAATCCTCTTTGTaGTTTTCTCGAAACCTCTGCAGCATAGAGAAGAAGGCCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: PGNTASGELQTQSSL*FSRNLCSIEKKASG Trigger: GCCCGAGGCCTTCTTCTCTATGCTGCAGAGGTTTCGAGAAAACAACAAAGAGGATTGTGTTTGCAACTCCCCTGAAGCTGTGTTCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | GTGGCATCTCTAAGTTGTTGCTGCTACAATCCAAGTTaGACCCTGATGCTGCTCTCACCACCGACCGACACA | + |
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Preference number: 6 (lower is better) Translates to: VASLSCCCYNPS*TLMLLSPPTDT Trigger: TGTGTCGGTCGGTGGTGAGAGCAGCATCAGGGTCAAACTTGGATTGTAGCAGCAACAACTTAGAGATGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | TGGCCTGTGGCAGGTAGGAAAGAGTCCATCCTGGAGTaGAACTTGACATACCAGGCCACATCAAACGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: WPVAGRKESILE*NLTYQATSNVS Trigger: TGACACGTTTGATGTGGCCTGGTATGTCAAGTTCAACTCCAGGATGGACTCTTTCCTACCTGCCACAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 90 bp | AGGCCTGGGAACACAGCTTCAGGGGAGTTGCAAACACAATCCTCTTaGTTGTTTTCTCGAAACCTCTGCAGCATAGAGAAGAAGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RPGNTASGELQTQSS*LFSRNLCSIEKKAS Trigger: CGAGGCCTTCTTCTCTATGCTGCAGAGGTTTCGAGAAAACAACAAAGAGGATTGTGTTTGCAACTCCCCTGAAGCTGTGTTCCCAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 72 bp | TCTCTTGCAGGCCTGGGAACACAGCTTCAGGGGAGTTaGAAACACAATCCTCTTTGTTGTTTTCTCGAAACC | + |
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Preference number: 6 (lower is better) Translates to: SLAGLGTQLQGS*KHNPLCCFLET Trigger: GGTTTCGAGAAAACAACAAAGAGGATTGTGTTTGCAACTCCCCTGAAGCTGTGTTCCCAGGCCTGCAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | GCGGAAGAAGTCTCTTGGGACAGTGGCATCTCTAAGTaGTTGCTGCTACAATCCAAGTTTGACCCTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: AEEVSWDSGISK*LLLQSKFDPDA Trigger: AGCATCAGGGTCAAACTTGGATTGTAGCAGCAACAACTTAGAGATGCCACTGTCCCAAGAGACTTCTTCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 72 bp | AAGTCTCTTGGGACAGTGGCATCTCTAAGTTGTTGCTaGTACAATCCAAGTTTGACCCTGATGCTGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: KSLGTVASLSCC*YNPSLTLMLLS Trigger: TGAGAGCAGCATCAGGGTCAAACTTGGATTGTAGCAGCAACAACTTAGAGATGCCACTGTCCCAAGAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS GCA 72 bp | CAAACACAATCCTCTTTGTTGTTTTCTCGAAACCTCTaGAGCATAGAGAAGAAGGCCTCGGGCTCACTAGTG | + |
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Preference number: 6 (lower is better) Translates to: QTQSSLLFSRNL*SIEKKASGSLV Trigger: CACTAGTGAGCCCGAGGCCTTCTTCTCTATGCTGCAGAGGTTTCGAGAAAACAACAAAGAGGATTGTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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| CDS CAA 72 bp | GAAGAAGTCTCTTGGGACAGTGGCATCTCTAAGTTGTaGCTGCTACAATCCAAGTTTGACCCTGATGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: EEVSWDSGISKL*LLQSKFDPDAA Trigger: AGCAGCATCAGGGTCAAACTTGGATTGTAGCAGCAACAACTTAGAGATGCCACTGTCCCAAGAGACTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030886.15 ENSMUST00000119975.3 ENSMUST00000172710.8 |
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