Pregenerated sensors for MIF4GD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020743Ensembl transcript IDs: ENSMUST00000021087.14, ENSMUST00000106506.8, ENSMUST00000106507.9, ENSMUST00000148574.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCTGTCAGGCCCAGGAGGAAGGTGGTGGGAAGATAACAGGACTTaGGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGACAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: PLSGPGGRWWEDNRT*GERKTVSLQPGDKS Trigger: GGACTTGTCTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTCCTGTTATCTTCCCACCACCTTCCTCCTGGGCCTGACAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR CAA 90 bp | GAGGCACCAAGGTCATGTTGCACCAGTGGCTACACAGTTCAGTGTTaGTTAGTTGGTTCTCCCCTGTCAGGCCCAGGAGGAAGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: EAPRSCCTSGYTVQC*LVGSPLSGPGGRWW Trigger: CCACCACCTTCCTCCTGGGCCTGACAGGGGAGAACCAACTAACAAACACTGAACTGTGTAGCCACTGGTGCAACATGACCTTGGTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021087.14 ENSMUST00000106507.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGTTTGTTAGTTGGTTCTCCCCTGTCAGGCCCAGGAGGAAGGTGGTGGGAGAGACAAGTCCAGATTaGGGGAAGGGAAGACGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SVFVSWFSPVRPRRKVVGETSPD*GKGRRQ Trigger: CTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTC...TCCCACCACCTTCCTCCTGGGCCTGACAGGGGAGAACCAACTAACAAACACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAAAGTCTAGAAGGGGCTaGAGCAAGGATTCTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SSARRQVQIEGREDGRTTKSRRG*SKDSGA Trigger: GGCACCAGAATCCTTGCTTCAGCCCCTTCTAGACTT...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR-3UTR TCA 90 bp | GACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGACAAGTCCAGATTAAGTCTAGAAGGGGCTaGAGCAAGGATTCTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: DLRGEEDSQSSARRQVQIKSRRG*SKDSGA Trigger: GGCACCAGAATCCTTGCTTCAGCCCCTTCTAGACTT...AATCTGGACTTGTCTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCAAAAAGTCTAGAAGGGGCTaGAGCAAGGATTCTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RRQVQIEGREDGRTTAVKKSRRG*SKDSGA Trigger: GGCACCAGAATCCTTGCTTCAGCCCCTTCTAGACTT...TTTGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGTTTGTTAGTTGGTTCTCCCCTGTCAGGCCCAGGAGGAAGGTGGTGGGAAAGCAAGGATTCTGGTaGCAGCTTGAAAAGAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SVFVSWFSPVRPRRKVVGKQGFW*QLEKRV Trigger: GACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTT...TCCCACCACCTTCCTCCTGGGCCTGACAGGGGAGAACCAACTAACAAACACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGAAGCAAGGATTCTGGTaGCAGCTTGAAAAGAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LQPGDKSRLREGKTAEPQKQGFW*QLEKRV Trigger: GACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTT...CTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGTGTTTGTTAGTTGGTTCTCCCCTGTCAGGCCCAGGAGGAAGGTGGTGGGACTGAAGCAAGGATTCTaGTGCCAGCTTGAAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SVFVSWFSPVRPRRKVVGLKQGF*CQLEKR Trigger: CCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAG...TCCCACCACCTTCCTCCTGGGCCTGACAGGGGAGAACCAACTAACAAACACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCCTGAAGCAAGGATTCTaGTGCCAGCTTGAAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QSSARRQVQIEGREDGRTLKQGF*CQLEKR Trigger: CCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAG...GGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAAAGCAAGGATTCTGGTaGCAGCTTGAAAAGAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SSARRQVQIEGREDGRTTKQGFW*QLEKRV Trigger: GACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTT...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR TCA 72 bp | CTAGAAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTaGAAAGAGGGTCACGGGAAGGCATGTGCAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: LEGAEARILVPA*KEGHGKACADL Trigger: CAGGTCTGCACATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| 3UTR CCA 72 bp | TTGCACCAGTGGCTACACAGTTCAGTGTTTGTTAGTTaGTTCTCCCCTGTCAGGCCCAGGAGGAAGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: LHQWLHSSVFVS*FSPVRPRRKVV Trigger: CACCACCTTCCTCCTGGGCCTGACAGGGGAGAACCAACTAACAAACACTGAACTGTGTAGCCACTGGTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021087.14 ENSMUST00000106507.9 |
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| 3UTR TCA 72 bp | AGACAGTCAGTCTTCAGCCAGGAGACAAGTCCAGATTaGGGGAAGGGAAGACGGCAGAACCACAGCAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: RQSVFSQETSPD*GKGRRQNHSSQ Trigger: TTGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACTGACTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGGCCCTGCAGGGAGCATaGTCGGAGCTGCTCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: LQPGDKSRLREGKTAEPQALQGA*SELLPR Trigger: GCGCGGGAGCAGCTCCGAGCATGCTCCCTGCAGGGC...CTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | GGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCATGCCCTGCAGGGAGCATaGTCGGAGCTGCTCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GLKQGFWCQLEKRVTGRHALQGA*SELLPR Trigger: GCGCGGGAGCAGCTCCGAGCATGCTCCCTGCAGGGC...ATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | GCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCCCGACCCGGTGCAGCTaGAGCACCAGGCAGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: ARRQVQIEGREDGRTTAVPTRCS*STRQST Trigger: GGTGGACTGCCTGGTGCTGCAGCTGCACCGGGTCGG...GACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR TCA 90 bp | CAGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCGCCGTGCCAGGGAGCTaGGGTCTGTCGGGAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QSSARRQVQIEGREDGRTAVPGS*GLSGAG Trigger: TCCTGCTCCCGACAGACCTCAGCTCCCTGGCACGGC...GGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR TCA 90 bp | AACCCTCACCCCAACCTGGTGAGGCAGTCACTCATGACTGGAGGAAACAGGCTTGCCGTGCCAGGGAGCTaGGGTCTGTCGGGAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NPHPNLVRQSLMTGGNRLAVPGS*GLSGAG Trigger: TCCTGCTCCCGACAGACCTCAGCTCCCTGGCACGGC...AAGCCTGTTTCCTCCAGTCATGAGTGACTGCCTCACCAGGTTGGGGTGAGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021087.14 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCCCTGCAGGGAGCATaGTCGGAGCTGCTCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: SSARRQVQIEGREDGRTTALQGA*SELLPR Trigger: GCGCGGGAGCAGCTCCGAGCATGCTCCCTGCAGGGC...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGTGCTCCCCGACCCGGTaGAGCTGCAGCACCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQPGDKSRLREGKTAEPQCSPTR*SCSTRQ Trigger: CTGCCTGGTGCTGCAGCTGCACCGGGTCGGGGAGCA...CTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR TCA 90 bp | GGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCATCCTTCTGCAGCCGGTTaGGGAGCCCACGGCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GLKQGFWCQLEKRVTGRHPSAAG*GAHGGR Trigger: TCTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGG...ATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR TCA 90 bp | CAGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCCCTTCTGCAGCCGGTTaGGGAGCCCACGGCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QSSARRQVQIEGREDGRTPSAAG*GAHGGR Trigger: TCTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGG...GGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR TCA 90 bp | GGGAAGATAACAGGACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGGCCGTGCCAGGGAGCTaGGGTCTGTCGGGAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GKITGLEGRGRQSVFSQEAVPGS*GLSGAG Trigger: TCCTGCTCCCGACAGACCTCAGCTCCCTGGCACGGC...CTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTCCTGTTATCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | GGGAAGATAACAGGACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGCCGACCCGGTGCAGCTaGAGCACCAGGCAGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: GKITGLEGRGRQSVFSQEPTRCS*STRQST Trigger: GGTGGACTGCCTGGTGCTGCAGCTGCACCGGGTCGG...CTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTCCTGTTATCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCATGCTCCCCGACCCGGTaGAGCTGCAGCACCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLQPGDKSRLREGKTAEPCSPTR*SCSTRQ Trigger: CTGCCTGGTGCTGCAGCTGCACCGGGTCGGGGAGCA...TGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACATGCTCCCCGACCCGGTaGAGCTGCAGCACCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSARRQVQIEGREDGRTTCSPTR*SCSTRQ Trigger: CTGCCTGGTGCTGCAGCTGCACCGGGTCGGGGAGCA...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR TCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACACCTTCTGCAGCCGGTTaGGGAGCCCACGGCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SSARRQVQIEGREDGRTTPSAAG*GAHGGR Trigger: TCTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGG...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCAAACCGACCCGGTGCAGCTaGAGCACCAGGCAGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: RRQVQIEGREDGRTTAVKPTRCS*STRQST Trigger: GGTGGACTGCCTGGTGCTGCAGCTGCACCGGGTCGG...TTTGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCAGCAGCAGCAGCCGTaGCAGGGAGCTGAGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KGLKQGFWCQLEKRVTGRQQQQP*QGAEVC Trigger: ACAGACCTCAGCTCCCTGGCACGGCTGCTGCTGCTG...CCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AACCCTCACCCCAACCTGGTGAGGCAGTCACTCATGACTGGAGGAAACAGGCTTCAGCAGCAGCAGCCGTaGCAGGGAGCTGAGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NPHPNLVRQSLMTGGNRLQQQQP*QGAEVC Trigger: ACAGACCTCAGCTCCCTGGCACGGCTGCTGCTGCTG...AAGCCTGTTTCCTCCAGTCATGAGTGACTGCCTCACCAGGTTGGGGTGAGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021087.14 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AACCCTCACCCCAACCTGGTGAGGCAGTCACTCATGACTGGAGGAAACAGGCTTCCACCTCCTCTTCCCTaGTCAGACTCTCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NPHPNLVRQSLMTGGNRLPPPLP*SDSQAG Trigger: CCCAGCCTGAGAGTCTGAGCAGGGAAGAGGAGGTGG...AAGCCTGTTTCCTCCAGTCATGAGTGACTGCCTCACCAGGTTGGGGTGAGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021087.14 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCCACCTCCTCTTCCCTaGTCAGACTCTCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KGLKQGFWCQLEKRVTGRPPPLP*SDSQAG Trigger: CCCAGCCTGAGAGTCTGAGCAGGGAAGAGGAGGTGG...CCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AACCCTCACCCCAACCTGGTGAGGCAGTCACTCATGACTGGAGGAAACAGGCTTTTCATCTTCTCCAGCTaGTCCCCGACCCGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NPHPNLVRQSLMTGGNRLFIFSS*SPTRCS Trigger: GCTGCACCGGGTCGGGGAGCAGCTGGAGAAGATGAA...AAGCCTGTTTCCTCCAGTCATGAGTGACTGCCTCACCAGGTTGGGGTGAGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021087.14 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGTTCATCTTCTCCAGCTaGTCCCCGACCCGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LQPGDKSRLREGKTAEPQFIFSS*SPTRCS Trigger: GCTGCACCGGGTCGGGGAGCAGCTGGAGAAGATGAA...CTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACCACCTCCTCTTCCCTaGTCAGACTCTCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLQPGDKSRLREGKTAEPPPPLP*SDSQAG Trigger: CCCAGCCTGAGAGTCTGAGCAGGGAAGAGGAGGTGG...TGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACATTCATCTTCTCCAGCTaGTCCCCGACCCGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSARRQVQIEGREDGRTTFIFSS*SPTRCS Trigger: GCTGCACCGGGTCGGGGAGCAGCTGGAGAAGATGAA...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | GACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGACAAGTCCAGATTCAGCAGCAGCAGCCGTaGCAGGGAGCTGAGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: DLRGEEDSQSSARRQVQIQQQQP*QGAEVC Trigger: ACAGACCTCAGCTCCCTGGCACGGCTGCTGCTGCTG...AATCTGGACTTGTCTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | GCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCGGTCTTCCAGCCAGCTaGCCGGAACTCAATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: ARRQVQIEGREDGRTTAVGLPAS*PELNHL Trigger: GAGATGATTGAGTTCCGGGCAGCTGGCTGGAAGACC...GACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGGCATCATACTCCTTCTaGAGCCGGTTGAGGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KGLKQGFWCQLEKRVTGRASYSF*SRLRSP Trigger: TGGGCTCCTCAACCGGCTGCAGAAGGAGTATGATGC...CCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | GGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCATGCATCATACTCCTTCTaGAGCCGGTTGAGGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GLKQGFWCQLEKRVTGRHASYSF*SRLRSP Trigger: TGGGCTCCTCAACCGGCTGCAGAAGGAGTATGATGC...ATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS-3UTR GCA 90 bp | AAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGAGCTCATCCATGCGCTaGCCGTTCATCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLKQGFWCQLEKRVTGRSSSMR*PFIFSS Trigger: GCTGGAGAAGATGAACGGGCAGCGCATGGATGAGCT...CCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCATGGTCTTCCAGCCAGCTaGCCGGAACTCAATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQGFWCQLEKRVTGRHGLPAS*PELNHL Trigger: GAGATGATTGAGTTCCGGGCAGCTGGCTGGAAGACC...ATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGGTCCTGCTTCCTTGCTaGATACACAGTCCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLKQGFWCQLEKRVTGRVLLPC*IHSPAE Trigger: CTCTGCAGGACTGTGTATTCAGCAAGGAAGCAGGAC...CCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCATGTCCTGCTTCCTTGCTaGATACACAGTCCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKQGFWCQLEKRVTGRHVLLPC*IHSPAE Trigger: CTCTGCAGGACTGTGTATTCAGCAAGGAAGCAGGAC...ATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGGTCCTGCTTCCTTGCTaGATACACAGTCCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQPGDKSRLREGKTAEPQVLLPC*IHSPAE Trigger: CTCTGCAGGACTGTGTATTCAGCAAGGAAGCAGGAC...CTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCGCGGTCTTCAGCAGCTaGTGCGTCTCTGCATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSARRQVQIEGREDGRTAVFSS*CVSASK Trigger: TTTTGATGCAGAGACGCAGCAGCTGCTGAAGACCGC...GGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAAGCTCATCCATGCGCTaGCCGTTCATCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSARRQVQIEGREDGRTTSSSMR*PFIFSS Trigger: GCTGGAGAAGATGAACGGGCAGCGCATGGATGAGCT...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACATACTCTCTGCCTGAATaGTGGCGTAGCACATGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSARRQVQIEGREDGRTTYSLPE*WRSTCV Trigger: GACGCATGTGCTACGCCATCATTCAGGCAGAGAGTA...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR TCA 90 bp | AGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCATACTCTCTGCCTGAATaGTGGCGTAGCACATGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQPGDKSRLREGKTAEPYSLPE*WRSTCV Trigger: GACGCATGTGCTACGCCATCATTCAGGCAGAGAGTA...TGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTTTGTTAGTTGGTTCTCCCCTGTCAGGCCCAGGAGGAAGGTGGTGGGAGTCTTCAGCAGCTGCTaGGTCTCTGCATCAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVFVSWFSPVRPRRKVVGVFSSC*VSASKD Trigger: GTCTTTTGATGCAGAGACGCAGCAGCTGCTGAAGAC...TCCCACCACCTTCCTCCTGGGCCTGACAGGGGAGAACCAACTAACAAACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | AGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCAGCGGTCTTCAGCAGCTaGTGCGTCTCTGCATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLQPGDKSRLREGKTAEPAVFSS*CVSASK Trigger: TTTTGATGCAGAGACGCAGCAGCTGCTGAAGACCGC...TGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCAAAGCATCATACTCCTTCTaGAGCCGGTTGAGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRQVQIEGREDGRTTAVKASYSF*SRLRSP Trigger: TGGGCTCCTCAACCGGCTGCAGAAGGAGTATGATGC...TTTGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCAAAAGCTCATCCATGCGCTaGCCGTTCATCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRQVQIEGREDGRTTAVKSSSMR*PFIFSS Trigger: GCTGGAGAAGATGAACGGGCAGCGCATGGATGAGCT...TTTGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | GACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGACAAGTCCAGATTGGTCTTCCAGCCAGCTaGCCGGAACTCAATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLRGEEDSQSSARRQVQIGLPAS*PELNHL Trigger: GAGATGATTGAGTTCCGGGCAGCTGGCTGGAAGACC...AATCTGGACTTGTCTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCGGTCCACAATCACGTTaGCTACTCTCTCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARRQVQIEGREDGRTTAVGPQSR*LLSLSP Trigger: TGGACTTAGAGAGAGTAGCCAACGTGATTGTGGACC...GACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| 3UTR CAA 72 bp | AAGACAGTCAGTCTTCAGCCAGGAGACAAGTCCAGATaGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTVSLQPGDKSR*REGKTAEPQQS Trigger: TGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACTGACTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGATAACAGGACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGGTCTTCAGCAGCTGCTaGGTCTCTGCATCAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKITGLEGRGRQSVFSQEVFSSC*VSASKD Trigger: GTCTTTTGATGCAGAGACGCAGCAGCTGCTGAAGAC...CTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTCCTGTTATCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGGGTCCACAATCACGTTaGCTACTCTCTCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGLKQGFWCQLEKRVTGRGPQSR*LLSLSP Trigger: TGGACTTAGAGAGAGTAGCCAACGTGATTGTGGACC...CCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCAGCTGCTGCGTCTCTaGATCAAAAGACTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGLKQGFWCQLEKRVTGRQLLRL*IKRLDF Trigger: AAAATCCAGTCTTTTGATGCAGAGACGCAGCAGCTG...CCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGCTGCTGCGTCTCTaGATCAAAAGACTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQPGDKSRLREGKTAEPQQLLRL*IKRLDF Trigger: AAAATCCAGTCTTTTGATGCAGAGACGCAGCAGCTG...CTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTTTGTTAGTTGGTTCTCCCCTGTCAGGCCCAGGAGGAAGGTGGTGGGACAGCTGCTGCGTCTCTaGATCAAAAGACTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVFVSWFSPVRPRRKVVGQLLRL*IKRLDF Trigger: AAAATCCAGTCTTTTGATGCAGAGACGCAGCAGCTG...TCCCACCACCTTCCTCCTGGGCCTGACAGGGGAGAACCAACTAACAAACACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGATAACAGGACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGGTAGCACATGCGTCCTaGTTCCTTGCTGAATACACA | + |
|
Preference number: 4 (lower is better) Translates to: GKITGLEGRGRQSVFSQEVAHAS*FLAEYT Trigger: TGTGTATTCAGCAAGGAAGCAGGACGCATGTGCTAC...CTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTCCTGTTATCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGTAGCACATGCGTCCTaGTTCCTTGCTGAATACACA | + |
|
Preference number: 4 (lower is better) Translates to: SSARRQVQIEGREDGRTTVAHAS*FLAEYT Trigger: TGTGTATTCAGCAAGGAAGCAGGACGCATGTGCTAC...TGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CCA 90 bp | AGTCTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCAGGTCCACAATCACGTTaGCTACTCTCTCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQPGDKSRLREGKTAEPGPQSR*LLSLSP Trigger: TGGACTTAGAGAGAGTAGCCAACGTGATTGTGGACC...TGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCAAAGTAGCACATGCGTCCTaGTTCCTTGCTGAATACACA | + |
|
Preference number: 4 (lower is better) Translates to: RRQVQIEGREDGRTTAVKVAHAS*FLAEYT Trigger: TGTGTATTCAGCAAGGAAGCAGGACGCATGTGCTAC...TTTGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS GCA 90 bp | TGCAGGGAGCATGCTCGGAGCTGCTCCCGCGCATCATACTCCTTCTaGAGCCGGTTGAGGAGCCCACGGCGGAAGACGCTCTGGCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CREHARSCSRASYSF*SRLRSPRRKTLWPA Trigger: AGCGGGCCAGAGCGTCTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGGAGTATGATGCGCGGGAGCAGCTCCGAGCATGCTCCCTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
||
| CDS GCA 90 bp | CCAGCCAGCTGCCCGGAACTCAATCATCTCCAGCAGCAGCAGCCGTaGCAGGGAGCTGAGGTCTGTCGGGAGCAGGAAGCCGTCCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PASCPELNHLQQQQP*QGAEVCREQEAVPD Trigger: ATCCGGGACGGCTTCCTGCTCCCGACAGACCTCAGCTCCCTGGCACGGCTGCTGCTGCTGGAGATGATTGAGTTCCGGGCAGCTGGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS GCA 90 bp | AGCAGGAAGCCGTCCCGGATTAGGATAAAGAGCTCATCCATGCGCTaGCCGTTCATCTTCTCCAGCTGCTCCCCGACCCGGTGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKPSRIRIKSSSMR*PFIFSSCSPTRCSC Trigger: GCAGCTGCACCGGGTCGGGGAGCAGCTGGAGAAGATGAACGGGCAGCGCATGGATGAGCTCTTTATCCTAATCCGGGACGGCTTCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS GCA 90 bp | GAGGAGCCCACGGCGGAAGACGCTCTGGCCCGCTTGCTTACTCTCTaGCTGAATGATGGCGTAGCACATGCGTCCTGCTTCCTTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EEPTAEDALARLLTL*LNDGVAHASCFLAE Trigger: TTCAGCAAGGAAGCAGGACGCATGTGCTACGCCATCATTCAGGCAGAGAGTAAGCAAGCGGGCCAGAGCGTCTTCCGCCGTGGGCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCATTCCTTCTGCAGCCGGTaGAGGAGCCCACGGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLKQGFWCQLEKRVTGRHSFCSR*RSPRRK Trigger: CTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGGA...ATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS GCA 90 bp | ACTGTAGTAATACTTGTGGGCAGCAGGAGTGGTCTTCCAGCCAGCTaGCCGGAACTCAATCATCTCCAGCAGCAGCAGCCGTGCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TVVILVGSRSGLPAS*PELNHLQQQQPCQG Trigger: TCCCTGGCACGGCTGCTGCTGCTGGAGATGATTGAGTTCCGGGCAGCTGGCTGGAAGACCACTCCTGCTGCCCACAAGTATTACTACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCAAATCCTTCTGCAGCCGGTaGAGGAGCCCACGGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRQVQIEGREDGRTTAVKSFCSR*RSPRRK Trigger: CTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGGA...TTTGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | GACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGACAAGTCCAGATTTCCTTCTGCAGCCGGTaGAGGAGCCCACGGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLRGEEDSQSSARRQVQISFCSR*RSPRRK Trigger: CTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGGA...AATCTGGACTTGTCTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTGTTTGTTAGTTGGTTCTCCCCTGTCAGGCCCAGGAGGAAGGTGGTGGGAACAGCACCTGGATCTTaGAGCGCGGTCTTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVFVSWFSPVRPRRKVVGTAPGS*SAVFSS Trigger: GCTGCTGAAGACCGCGCTCAAAGATCCAGGTGCTGT...TCCCACCACCTTCCTCCTGGGCCTGACAGGGGAGAACCAACTAACAAACACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCATGACGCTCTGGCCCGCTaGCTTACTCTCTGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLKQGFWCQLEKRVTGRHDALAR*LTLCLN Trigger: ATTCAGGCAGAGAGTAAGCAAGCGGGCCAGAGCGTC...ATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAGCCAGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGGACGCTCTGGCCCGCTaGCTTACTCTCTGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQPGDKSRLREGKTAEPQDALAR*LTLCLN Trigger: ATTCAGGCAGAGAGTAAGCAAGCGGGCCAGAGCGTC...CTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGATAACAGGACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGACAGCACCTGGATCTTaGAGCGCGGTCTTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKITGLEGRGRQSVFSQETAPGS*SAVFSS Trigger: GCTGCTGAAGACCGCGCTCAAAGATCCAGGTGCTGT...CTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTCCTGTTATCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGATAACAGGACTTGAGGGGAGAGGAAGACAGTCAGTCTTCAGCCAGGAGGACGCTCTGGCCCGCTaGCTTACTCTCTGCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GKITGLEGRGRQSVFSQEDALAR*LTLCLN Trigger: ATTCAGGCAGAGAGTAAGCAAGCGGGCCAGAGCGTC...CTCCTGGCTGAAGACTGACTGTCTTCCTCTCCCCTCAAGTCCTGTTATCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGACAAGTCCAGATTGAGGGAAGGGAAGACGGCAGAACCACAGCAGTCAAAACAGCACCTGGATCTTaGAGCGCGGTCTTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRQVQIEGREDGRTTAVKTAPGS*SAVFSS Trigger: GCTGCTGAAGACCGCGCTCAAAGATCCAGGTGCTGT...TTTGACTGCTGTGGTTCTGCCGTCTTCCCTTCCCTCAATCTGGACTTGTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGCATTGGTCCACAATCACGTaGGCTACTCTCTCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLKQGFWCQLEKRVTGRHWSTIT*ATLSKS Trigger: GGACTTAGAGAGAGTAGCCAACGTGATTGTGGACCA...ATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGGCTGAAGCAAGGATTCTGGTGCCAGCTTGAAAAGAGGGTCACGGGAAGGTGGTCCACAATCACGTaGGCTACTCTCTCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGLKQGFWCQLEKRVTGRWSTIT*ATLSKS Trigger: GGACTTAGAGAGAGTAGCCAACGTGATTGTGGACCA...CCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
||
| CDS GCA 90 bp | CGCTTGCTTACTCTCTGCCTGAATGATGGCGTAGCACATGCGTCCTaGTTCCTTGCTGAATACACAGTCCTGCAGAGAATGGTCCACAAT | + |
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Preference number: 5 (lower is better) Translates to: RLLTLCLNDGVAHAS*FLAEYTVLQRMVHN Trigger: ATTGTGGACCATTCTCTGCAGGACTGTGTATTCAGCAAGGAAGCAGGACGCATGTGCTACGCCATCATTCAGGCAGAGAGTAAGCAAGCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS CCA 90 bp | CACATGCGTCCTGCTTCCTTGCTGAATACACAGTCCTGCAGAGAATaGTCCACAATCACGTTGGCTACTCTCTCTAAGTCCACAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: HMRPASLLNTQSCRE*STITLATLSKSTAP Trigger: AGGTGCTGTGGACTTAGAGAGAGTAGCCAACGTGATTGTGGACCATTCTCTGCAGGACTGTGTATTCAGCAAGGAAGCAGGACGCATGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS CAA 72 bp | AGCTGCTCCCGCGCATCATACTCCTTCTGCAGCCGGTaGAGGAGCCCACGGCGGAAGACGCTCTGGCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SCSRASYSFCSR*RSPRRKTLWPA Trigger: AGCGGGCCAGAGCGTCTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGGAGTATGATGCGCGGGAGCAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS GCA 72 bp | CATGCTCGGAGCTGCTCCCGCGCATCATACTCCTTCTaGAGCCGGTTGAGGAGCCCACGGCGGAAGACGCTC | + |
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Preference number: 6 (lower is better) Translates to: HARSCSRASYSF*SRLRSPRRKTL Trigger: GAGCGTCTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGGAGTATGATGCGCGGGAGCAGCTCCGAGCATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS GCA 72 bp | TGCCCGTTCATCTTCTCCAGCTGCTCCCCGACCCGGTaGAGCTGCAGCACCAGGCAGTCCACCTCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CPFIFSSCSPTR*SCSTRQSTSSS Trigger: GGAAGAGGAGGTGGACTGCCTGGTGCTGCAGCTGCACCGGGTCGGGGAGCAGCTGGAGAAGATGAACGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS CAA 90 bp | CATGCTCGGAGCTGCTCCCGCGCATCATACTCCTTCTGCAGCCGGTaGAGGAGCCCACGGCGGAAGACGCTCTGGCCCGCTTGCTTACTC | + |
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Preference number: 6 (lower is better) Translates to: HARSCSRASYSFCSR*RSPRRKTLWPACLL Trigger: GAGTAAGCAAGCGGGCCAGAGCGTCTTCCGCCGTGGGCTCCTCAACCGGCTGCAGAAGGAGTATGATGCGCGGGAGCAGCTCCGAGCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS GCA 72 bp | CCGTCCCGGATTAGGATAAAGAGCTCATCCATGCGCTaGCCGTTCATCTTCTCCAGCTGCTCCCCGACCCGG | + |
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Preference number: 6 (lower is better) Translates to: PSRIRIKSSSMR*PFIFSSCSPTR Trigger: CCGGGTCGGGGAGCAGCTGGAGAAGATGAACGGGCAGCGCATGGATGAGCTCTTTATCCTAATCCGGGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS GCA 72 bp | ACGGCGGAAGACGCTCTGGCCCGCTTGCTTACTCTCTaGCTGAATGATGGCGTAGCACATGCGTCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TAEDALARLLTL*LNDGVAHASCF Trigger: GAAGCAGGACGCATGTGCTACGCCATCATTCAGGCAGAGAGTAAGCAAGCGGGCCAGAGCGTCTTCCGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS GCA 72 bp | ATACTTGTGGGCAGCAGGAGTGGTCTTCCAGCCAGCTaGCCGGAACTCAATCATCTCCAGCAGCAGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: ILVGSRSGLPAS*PELNHLQQQQP Trigger: CGGCTGCTGCTGCTGGAGATGATTGAGTTCCGGGCAGCTGGCTGGAAGACCACTCCTGCTGCCCACAAGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 |
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| CDS CAA 72 bp | GTTGAGGAGCCCACGGCGGAAGACGCTCTGGCCCGCTaGCTTACTCTCTGCCTGAATGATGGCGTAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: VEEPTAEDALAR*LTLCLNDGVAH Trigger: ATGTGCTACGCCATCATTCAGGCAGAGAGTAAGCAAGCGGGCCAGAGCGTCTTCCGCCGTGGGCTCCTCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS CAA 90 bp | TCCTTGCTGAATACACAGTCCTGCAGAGAATGGTCCACAATCACGTaGGCTACTCTCTCTAAGTCCACAGCACCTGGATCTTTGAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: SLLNTQSCREWSTIT*ATLSKSTAPGSLSA Trigger: CGCGCTCAAAGATCCAGGTGCTGTGGACTTAGAGAGAGTAGCCAACGTGATTGTGGACCATTCTCTGCAGGACTGTGTATTCAGCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS GCA 72 bp | ACTCTCTGCCTGAATGATGGCGTAGCACATGCGTCCTaGTTCCTTGCTGAATACACAGTCCTGCAGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: TLCLNDGVAHAS*FLAEYTVLQRM Trigger: CATTCTCTGCAGGACTGTGTATTCAGCAAGGAAGCAGGACGCATGTGCTACGCCATCATTCAGGCAGAGAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS CCA 72 bp | ATACACAGTCCTGCAGAGAATGGTCCACAATCACGTTaGCTACTCTCTCTAAGTCCACAGCACCTGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: IHSPAENGPQSR*LLSLSPQHLDL Trigger: AAGATCCAGGTGCTGTGGACTTAGAGAGAGTAGCCAACGTGATTGTGGACCATTCTCTGCAGGACTGTGTAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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| CDS CAA 72 bp | AATACACAGTCCTGCAGAGAATGGTCCACAATCACGTaGGCTACTCTCTCTAAGTCCACAGCACCTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: NTQSCREWSTIT*ATLSKSTAPGS Trigger: AGATCCAGGTGCTGTGGACTTAGAGAGAGTAGCCAACGTGATTGTGGACCATTCTCTGCAGGACTGTGTATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021087.14 ENSMUST00000106506.8 ENSMUST00000106507.9 ENSMUST00000148574.2 |
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