Pregenerated sensors for MIER3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032727Ensembl transcript IDs: ENSMUST00000047412.11, ENSMUST00000109271.3, ENSMUST00000109272.9, ENSMUST00000137268.8, ENSMUST00000231273.2, ENSMUST00000231979.2
Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCACAGCACCAGGTCACACTCGTCAACGTCCACATCCTCCGAGTaGCCTGGACACACAGGATGGGCCAGCCGACACCGCCACTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SHSTRSHSSTSTSSE*PGHTGWASRHRHCS Trigger: TGAGCAGTGGCGGTGTCGGCTGGCCCATCCTGTGTGTCCAGGGCACTCGGAGGATGTGGACGTTGACGAGTGTGACCTGGTGCTGTGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR CCA 90 bp | CACTCGTCAACGTCCACATCCTCCGAGTGCCCTGGACACACAGGATaGGCCAGCCGACACCGCCACTGCTCACCATGGATTTTTGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: HSSTSTSSECPGHTG*ASRHRHCSPWIFGL Trigger: CAAACCAAAAATCCATGGTGAGCAGTGGCGGTGTCGGCTGGCCCATCCTGTGTGTCCAGGGCACTCGGAGGATGTGGACGTTGACGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR TCA 90 bp | CCATTGCTGGGCAGGGTGAGTAACTCTTCCGTTACGACAGGCACATaGTTGACGTGTCCACGAGGCGTGTTGGCCAGCGGAGGAAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: PLLGRVSNSSVTTGT*LTCPRGVLASGGKL Trigger: CAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGACACGTCAATCATGTGCCTGTCGTAACGGAAGAGTTACTCACCCTGCCCAGCAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR TCA 90 bp | GGTACTGCATACCCATTGTCTCTGGGCTTCCCGTTCCCATCACTCTaGATGAAGGGCGGCGTGCTGGTGCTGATGCAGACTATGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: GTAYPLSLGFPFPSL*MKGGVLVLMQTMGI Trigger: AATGCCCATAGTCTGCATCAGCACCAGCACGCCGCCCTTCATTCAGAGTGATGGGAACGGGAAGCCCAGAGACAATGGGTATGCAGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR TCA 90 bp | GCTGTCAGGTCACTGGCAGTGAAGGAGCTGAGAATGTTCAGCGGCTaGTCAGGAACGGGCTCAGGCCGGTTACAAGTTAAGGCTGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: AVRSLAVKELRMFSG*SGTGSGRLQVKAEE Trigger: TTCTTCAGCCTTAACTTGTAACCGGCCTGAGCCCGTTCCTGATCAGCCGCTGAACATTCTCAGCTCCTTCACTGCCAGTGACCTGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR TCA 90 bp | GATCAGGAACGGGCTCAGGCCGGTTACAAGTTAAGGCTGAAGAACTaGCGGTACCACCCAGAGACTCTGTCTCATCTACGAGACGATCCA | + |
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Preference number: 1 (lower is better) Translates to: DQERAQAGYKLRLKN*RYHPETLSHLRDDP Trigger: TGGATCGTCTCGTAGATGAGACAGAGTCTCTGGGTGGTACCGTCAGTTCTTCAGCCTTAACTTGTAACCGGCCTGAGCCCGTTCCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR GCA 90 bp | CCAGCGGAGGAAAGCTGTCATCCAGACAATTCACAGCGGTGGGGTTaGAGACAGTTGCTACACTGTTGGTTAAAGCTGTCAGGTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: PAEESCHPDNSQRWG*RQLLHCWLKLSGHW Trigger: CCAGTGACCTGACAGCTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTCTGGATGACAGCTTTCCTCCGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR CCA 90 bp | AAAGAGGCCACATCAGTTCTGAACATCTGTGCTGGTTTGAGCTGGTaGCCTCTGTCTACAGGTTTTAAATCTGGGATGAGGGCGGCGGGA | + |
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Preference number: 1 (lower is better) Translates to: KEATSVLNICAGLSW*PLSTGFKSGMRAAG Trigger: TCCCGCCGCCCTCATCCCAGATTTAAAACCTGTAGACAGAGGCCACCAGCTCAAACCAGCACAGATGTTCAGAACTGATGTGGCCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR CCA 90 bp | TGTTGGCCAGCGGAGGAAAGCTGTCATCCAGACAATTCACAGCGGTaGGGTTGCAGACAGTTGCTACACTGTTGGTTAAAGCTGTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: CWPAEESCHPDNSQR*GCRQLLHCWLKLSG Trigger: ACCTGACAGCTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTCTGGATGACAGCTTTCCTCCGCTGGCCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR GCA 90 bp | GAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTaGATACCCATTGTCTCTGGGCTTCCCGTTCCCATCACTCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: ERLCKPDSSPSVYWY*IPIVSGLPVPITLN Trigger: ATTCAGAGTGATGGGAACGGGAAGCCCAGAGACAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR CCA 90 bp | GAACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTaGCAACTTCCTGGGCTTTGTAGACTGTGCCTTGCAAGTCAATTG | + |
|
Preference number: 1 (lower is better) Translates to: ELQCSKQGVPKCKPL*QLPGLCRLCLASQL Trigger: CAATTGACTTGCAAGGCACAGTCTACAAAGCCCAGGAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR CCA 90 bp | CACAGGATGGGCCAGCCGACACCGCCACTGCTCACCATGGATTTTTaGTTTGTTCATATGAAAATATTGCGGCAAATGAAAGAAACAAAG | + |
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Preference number: 1 (lower is better) Translates to: HRMGQPTPPLLTMDF*FVHMKILRQMKETK Trigger: CTTTGTTTCTTTCATTTGCCGCAATATTTTCATATGAACAAACCAAAAATCCATGGTGAGCAGTGGCGGTGTCGGCTGGCCCATCCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR TCA 90 bp | ACAAACTGCCAAAGTCAGCTACAGAGACAGCCATTTTGGCACTGGTaGTGTGATGTGTATGGTTTTCAAAGTCTACACCCAGGTTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: TNCQSQLQRQPFWHW*CDVYGFQSLHPGCL Trigger: TAAACAACCTGGGTGTAGACTTTGAAAACCATACACATCACATCACCAGTGCCAAAATGGCTGTCTCTGTAGCTGACTTTGGCAGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR GCA 90 bp | GCTTCGGCACTCCTCTTCCGTCCATGCTGTCATTCCTTCTTGAGATaGCTTTCCATTACAGCAGTACCTTTCAATTGCTTCTTTTATATT | + |
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Preference number: 1 (lower is better) Translates to: ASALLFRPCCHSFLR*LSITAVPFNCFFYI Trigger: AATATAAAAGAAGCAATTGAAAGGTACTGCTGTAATGGAAAGGCATCTCAAGAAGGAATGACAGCATGGACGGAAGAGGAGTGCCGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR GCA 90 bp | ACTGATGTCATAGTGAAAAAGGTTCAAACTTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCC | + |
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Preference number: 1 (lower is better) Translates to: TDVIVKKVQTSSERL*KPDSSPSVYWYCIP Trigger: GGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTTTTTCACTATGACATCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR GCA 90 bp | CAATGCCCATCTTCAATCTCTTTGCTGGTCTTTCGGATTCTTCGCTaGACATGGGGTTTAACTCTGAGTGATAAAATCCAGTCTCAAATA | + |
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Preference number: 1 (lower is better) Translates to: QCPSSISLLVFRILR*TWGLTLSDKIQSQI Trigger: TATTTGAGACTGGATTTTATCACTCAGAGTTAAACCCCATGTGCAGCGAAGAATCCGAAAGACCAGCAAAGAGATTGAAGATGGGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR TCA 90 bp | TACAGCAGTACCTTTCAATTGCTTCTTTTATATTGTGGTTACACTTaGGAAGTTCGTATAATGCCTGTTCATTATCCCTGGTGTGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: YSSTFQLLLLYCGYT*EVRIMPVHYPWCVC Trigger: GCACACACACCAGGGATAATGAACAGGCATTATACGAACTTCTCAAGTGTAACCACAATATAAAAGAAGCAATTGAAAGGTACTGCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR TCA 90 bp | ATAACTAAAGTGTCCATTCAACTTGCTGATAATCAAAACTCTAGATaGGAAACACTGTTTCCATCTTACATCAAGACCCCAGCGATGCAT | + |
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Preference number: 1 (lower is better) Translates to: ITKVSIQLADNQNSR*ETLFPSYIKTPAMH Trigger: ATGCATCGCTGGGGTCTTGATGTAAGATGGAAACAGTGTTTCTCATCTAGAGTTTTGATTATCAGCAAGTTGAATGGACACTTTAGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR GCA 90 bp | CTAGTTCCTCATACTCACAGGGTACTTAGTTCAAACTGGGACAATTaGAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATATT | + |
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Preference number: 1 (lower is better) Translates to: LVPHTHRVLSSNWDN*NHWSSKRNINIYHI Trigger: AATATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTTTGAACTAAGTACCCTGTGAGTATGAGGAACTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGGCGGCGTGCTGGTGCTaGTGCAGACTATGGGCATTG | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWAACWC*CRLWAL Trigger: CAATGCCCATAGTCTGCATCAGCACCAGCACGCCGC...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGACATCTGTGCTGGTTTaGGCTGGTGGCCTCTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWTSVLV*AGGLCL Trigger: TAGACAGAGGCCACCAGCTCAAACCAGCACAGATGT...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR CAA 90 bp | AAGGCCGGCATAGCACGGCGAAGCACACGTGACGAAAGTAAAGTATaGCTCCAGTCACAGCACCAGGTCACACTCGTCAACGTCCACATC | + |
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Preference number: 2 (lower is better) Translates to: KAGIARRSTRDESKV*LQSQHQVTLVNVHI Trigger: GATGTGGACGTTGACGAGTGTGACCTGGTGCTGTGACTGGAGCAATACTTTACTTTCGTCACGTGTGCTTCGCCGTGCTATGCCGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGCCCCCGGCAGTACAATaGCCAATTCTGTGTAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWPPAVQ*PILCKV Trigger: TACCTTACACAGAATTGGTCATTGTACTGCCGGGGG...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGGCTGGTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWAGLSW*PLSTGF Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAACCAGC...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR CAA 90 bp | GCCAGCGGAGGAAAGCTGTCATCCAGACAATTCACAGCGGTGGGGTaGCAGACAGTTGCTACACTGTTGGTTAAAGCTGTCAGGTCACTG | + |
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Preference number: 2 (lower is better) Translates to: ASGGKLSSRQFTAVG*QTVATLLVKAVRSL Trigger: CAGTGACCTGACAGCTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTCTGGATGACAGCTTTCCTCCGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGGGGCTTTGTAGACTGTaGCTTGCAAGTCAATTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWGLCRL*LASQLP Trigger: AGGCAATTGACTTGCAAGGCACAGTCTACAAAGCCC...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGCAAAAGGAGCTGACATaGAAAGAGGCCACATCAGTT | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWQKELT*KEATSV Trigger: AACTGATGTGGCCTCTTTTCATGTCAGCTCCTTTTG...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGCCTGGTCTGGAATTTTaGAACAGGATCCAAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWPGLEF*NRIQAS Trigger: ACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAGG...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCCGACAGGCACATGATTaGCGTGTCCACGAGGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: SNMEPRLPIVYCVHTGILRQAHD*RVHEAC Trigger: ACACGCCTCGTGGACACGTCAATCATGTGCCTGTCG...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWSSERL*KPDSSP Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGAAGGTAGCCCTGGTCTaGAATTTTGAAACAGGATCC | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWKVALV*NFETGS Trigger: GGATCCTGTTTCAAAATTCCAGACCAGGGCTACCTT...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGCAGTTGCTACACTGTTaGTTAAAGCTGTCAGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWQLLHC*LKLSGH Trigger: GTGACCTGACAGCTTTAACCAACAGTGTAGCAACTG...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR CAA 90 bp | TGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTaGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: WSGILKQDPSKCLLH*HTAPRAGFQTDGLA Trigger: AGCAAGACCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR CAA 90 bp | GGTGAGTTACCACTGTCCGTTTCAACGTCCTCAATCTCGGACTCCTaGTCTCCATCACATGTAGTGTTTGATCGTAAAGGCCGGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GELPLSVSTSSISDS*SPSHVVFDRKGRGK Trigger: CTTCCCCCGGCCTTTACGATCAAACACTACATGTGATGGAGACAAGGAGTCCGAGATTGAGGACGTTGAAACGGACAGTGGTAACTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGATAATAATGCTACATTaGACAGGGATCGGGGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWIIMLH*TGIGVG Trigger: ACCAACCCCGATCCCTGTTCAATGTAGCATTATTAT...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | GACAATTCACAGCGGTGGGGTTGCAGACAGTTGCTACACTGTTGGTTAAAGCTGGGTACCTGTAAACATTaGTCCCACTGCATCCGTTAC | + |
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Preference number: 2 (lower is better) Translates to: DNSQRWGCRQLLHCWLKLGTCKH*SHCIRY Trigger: GTAACGGATGCAGTGGGATCAATGTTTACAGGTACC...CAGCTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCAGTTCTGAACATCTGTaGTGGTTTGAGCTGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: SNMEPRLPIVYCVHTGILSSEHL*WFELVA Trigger: GGCCACCAGCTCAAACCAGCACAGATGTTCAGAACT...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCGCTGGTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SNMEPRLPIVYCVHTGILAGLSW*PLSTGF Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAACCAGC...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCAACATCTGTGCTGGTTTaGGCTGGTGGCCTCTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: KDYANLIAPLQFTGTAYPTSVLV*AGGLCL Trigger: TAGACAGAGGCCACCAGCTCAAACCAGCACAGATGT...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR TCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCCCCCCGGCAGTACAATaGCCAATTCTGTGTAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFPPAVQ*PILCKV Trigger: TACCTTACACAGAATTGGTCATTGTACTGCCGGGGG...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR GCA 90 bp | GTTACCACTGTCCGTTTCAACGTCCTCAATCTCGGACTCCTTGTCTCCATCACATCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VTTVRFNVLNLGLLVSITSSERL*KPDSSP Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...TGTGATGGAGACAAGGAGTCCGAGATTGAGGACGTTGAAACGGACAGTGGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTAGTGTCTCCTTCATTTaGACACAGCTCCTCGCGCCG | + |
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Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTASVSFI*TQLLAP Trigger: CGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACT...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
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| 3UTR-3UTR GCA 90 bp | GACAATTCACAGCGGTGGGGTTGCAGACAGTTGCTACACTGTTGGTTAAAGCTGTATCCCTGGTGTGTGTaGCTGAAGAAATCCTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: DNSQRWGCRQLLHCWLKLYPWCV*LKKSCL Trigger: TAGACAGGATTTCTTCAGGCACACACACCAGGGATA...CAGCTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGGCTGGTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: HLESIRKQHGAQATHCLLAGLSW*PLSTGF Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAACCAGC...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACTGTGCTGGTTTGAGCTaGTGGCCTCTGTCTACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LVWNFETGSKQVSPSFAHCAGLS*WPLSTG Trigger: ACCTGTAGACAGAGGCCACCAGCTCAAACCAGCACA...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTCTGAACATCTGTGCTaGTTTGAGCTGGTGGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: HLESIRKQHGAQATHCLLSEHLC*FELVAS Trigger: AGAGGCCACCAGCTCAAACCAGCACAGATGTTCAGA...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGGTCCACGAGGCGTGTTaGCCAGCGGAGGAAAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTVHEAC*PAEESC Trigger: ACAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGAC...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTACATCTGTGCTGGTTTaGGCTGGTGGCCTCTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTATSVLV*AGGLCL Trigger: TAGACAGAGGCCACCAGCTCAAACCAGCACAGATGT...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCCAAAAGGAGCTGACATaGAAAGAGGCCACATCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SNMEPRLPIVYCVHTGILQKELT*KEATSV Trigger: AACTGATGTGGCCTCTTTTCATGTCAGCTCCTTTTG...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAACATTGCTGGGCAGGGTaGGTAACTCTTCCGTTACGA | + |
|
Preference number: 2 (lower is better) Translates to: FSTTLKRLTLINSNTTRKHCWAG*VTLPLR Trigger: TCGTAACGGAAGAGTTACTCACCCTGCCCAGCAATG...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SNMEPRLPIVYCVHTGILSSERL*KPDSSP Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCGGGCTTTGTAGACTGTaGCTTGCAAGTCAATTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFGLCRL*LASQLP Trigger: AGGCAATTGACTTGCAAGGCACAGTCTACAAAGCCC...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCTGCATAGATAAACTGTaGCAGCCAAAGAGAATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SNMEPRLPIVYCVHTGILCIDKL*QPKRMG Trigger: GCCCATTCTCTTTGGCTGGCACAGTTTATCTATGCA...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCATCCGTTTGTCTCGTTaGCAGACAAACTGCCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SNMEPRLPIVYCVHTGILIRLSR*QTNCQS Trigger: ACTTTGGCAGTTTGTCTGCCAACGAGACAAACGGAT...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR CAA 90 bp | CCAGTCACTAGGACCACTACCTCCTACCTACTCTTCAGCACGACCTaGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: PVTRTTTSYLLFSTT*KRLTLINSNTTRKI Trigger: TATTTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAAGAGTAGGTAGGAGGTAGTGGTCCTAGTGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTCCCCCGGCAGTACAATaGCCAATTCTGTGTAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTAPPAVQ*PILCKV Trigger: TACCTTACACAGAATTGGTCATTGTACTGCCGGGGG...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGAGTGTCTCCTTCATTTaGACACAGCTCCTCGCGCCG | + |
|
Preference number: 2 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTSVSFI*TQLLAP Trigger: CGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACT...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCGCAGTTCACAGTTTGTaGAATAAATACCCTCCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFAVHSL*NKYPPV Trigger: GACGGGAGGGTATTTATTGCACAAACTGTGAACTGC...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CAA 90 bp | ACACAGGATGGGCCAGCCGACACCGCCACTGCTCACCATGGATTTTaGGTTTGTTCATATGAAAATATTGCGGCAAATGAAAGAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: TQDGPADTATAHHGF*VCSYENIAANERNK Trigger: TTTGTTTCTTTCATTTGCCGCAATATTTTCATATGAACAAACCAAAAATCCATGGTGAGCAGTGGCGGTGTCGGCTGGCCCATCCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CAA 90 bp | ACTTTTTCATTTCCAGTTCTCAATGAGGTCTCAACAAGGTACTCCTaGACTTTGCTCTCCAAAAGCACACCAGGATGCCACAGTAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: TFSFPVLNEVSTRYS*TLLSKSTPGCHSNW Trigger: CCAGTTACTGTGGCATCCTGGTGTGCTTTTGGAGAGCAAAGTCAAGGAGTACCTTGTTGAGACCTCATTGAGAACTGGAAATGAAAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTGGTACCTGTAAACATTaGTCCCACTGCATCCGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTAGTCKH*SHCIRY Trigger: GTAACGGATGCAGTGGGATCAATGTTTACAGGTACC...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCACCTGGTCTGGAATTTTaGAACAGGATCCAAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: KDYANLIAPLQFTGTAYPPGLEF*NRIQAS Trigger: ACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAGG...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCAATCTCTTTGCTGGTCTTTCGGATTCTTCGCTGCACATGGGGTTTAACTCAACAAGGTACTCCTTaGCTTTGCTCTCCAAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SSISLLVFRILRCTWGLTQQGTP*LCSPKA Trigger: TGCTTTTGGAGAGCAAAGTCAAGGAGTACCTTGTTG...AGTTAAACCCCATGTGCAGCGAAGAATCCGAAAGACCAGCAAAGAGATTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAAGGGCTTTGTAGACTGTaGCTTGCAAGTCAATTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: FSTTLKRLTLINSNTTRKGLCRL*LASQLP Trigger: AGGCAATTGACTTGCAAGGCACAGTCTACAAAGCCC...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAACACTTTGAACTGCAGTaGTCCAAACAAGGTGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FSTTLKRLTLINSNTTRKHFELQ*SKQGVP Trigger: TGGGACACCTTGTTTGGAGCACTGCAGTTCAAAGTG...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATTCCACATCCTCCGAGTaGCCTGGACACACAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: NWDNCNHWSSKRNINIYHSTSSE*PGHTGW Trigger: CCATCCTGTGTGTCCAGGGCACTCGGAGGATGTGGA...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCAAAGGTAGCCCTGGTCTaGAATTTTGAAACAGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: KDYANLIAPLQFTGTAYPKVALV*NFETGS Trigger: GGATCCTGTTTCAAAATTCCAGACCAGGGCTACCTT...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCATTCTTCGCTGCACATaGGGTTTAACTCTGAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFILRCT*GLTLSD Trigger: ATCACTCAGAGTTAAACCCCATGTGCAGCGAAGAAT...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGGGACAAAACCCCATATaGATACCACATCTTCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: HLESIRKQHGAQATHCLLGQNPI*IPHLQM Trigger: CATTTGAAGATGTGGTATTCATATGGGGTTTTGTCC...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCGGACAAAACCCCATATaGATACCACATCTTCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFGQNPI*IPHLQM Trigger: CATTTGAAGATGTGGTATTCATATGGGGTTTTGTCC...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCAGTATATTAACACTTTaGACTGCAGTGCTCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: SNMEPRLPIVYCVHTGILSILTL*TAVLQT Trigger: TGTTTGGAGCACTGCAGTTCAAAGTGTTAATATACT...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAATCATCAGCGGAAGACTaGGTTTCCTCGTCATCGCCG | + |
|
Preference number: 2 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKSSAED*VSSSSP Trigger: CGGCGATGACGAGGAAACTCAGTCTTCCGCTGATGA...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATGTTACGACAGGCACATaGTTGACGTGTCCACGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: NWDNCNHWSSKRNINIYHVTTGT*LTCPRG Trigger: GCCTCGTGGACACGTCAATCATGTGCCTGTCGTAAC...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGAGTTCTGAACATCTGTaGTGGTTTGAGCTGGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTSSEHL*WFELVA Trigger: GGCCACCAGCTCAAACCAGCACAGATGTTCAGAACT...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGATTAACACTTTGAACTaGAGTGCTCCAAACAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HLESIRKQHGAQATHCLLINTLN*SAPNKV Trigger: CACCTTGTTTGGAGCACTGCAGTTCAAAGTGTTAAT...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTGCAGTTCACAGTTTGTaGAATAAATACCCTCCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTAAVHSL*NKYPPV Trigger: GACGGGAGGGTATTTATTGCACAAACTGTGAACTGC...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGCATCTTCAATCTCTTTaGTGGTCTTTCGGATTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HLESIRKQHGAQATHCLLHLQSL*WSFGFF Trigger: GAAGAATCCGAAAGACCAGCAAAGAGATTGAAGATG...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGTCTGAACATCTGTGCTaGTTTGAGCTGGTGGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTSEHLC*FELVAS Trigger: AGAGGCCACCAGCTCAAACCAGCACAGATGTTCAGA...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAAAAGGTAGCCCTGGTCTaGAATTTTGAAACAGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: FSTTLKRLTLINSNTTRKKVALV*NFETGS Trigger: GGATCCTGTTTCAAAATTCCAGACCAGGGCTACCTT...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTGCCAGCCAAAGAGAATaGGCATTTTCATGTAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTAASQRE*AFSCKC Trigger: GCACTTACATGAAAATGCCCATTCTCTTTGGCTGGC...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAAATAATAATGCTACATTaGACAGGGATCGGGGTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: FSTTLKRLTLINSNTTRKIIMLH*TGIGVG Trigger: ACCAACCCCGATCCCTGTTCAATGTAGCATTATTAT...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGAGTATATTAACACTTTaGACTGCAGTGCTCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: HLESIRKQHGAQATHCLLSILTL*TAVLQT Trigger: TGTTTGGAGCACTGCAGTTCAAAGTGTTAATATACT...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGCACTTTGAACTGCAGTaGTCCAAACAAGGTGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTHFELQ*SKQGVP Trigger: TGGGACACCTTGTTTGGAGCACTGCAGTTCAAAGTG...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCAATTAACACTTTGAACTaGAGTGCTCCAAACAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KDYANLIAPLQFTGTAYPINTLN*SAPNKV Trigger: CACCTTGTTTGGAGCACTGCAGTTCAAAGTGTTAAT...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGCTCCTCTTCCGTCCATaGTGTCATTCCTTCTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTLLFRP*CHSFLR Trigger: TCTCAAGAAGGAATGACAGCATGGACGGAAGAGGAG...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAACCCCCGGCAGTACAATaGCCAATTCTGTGTAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: NKSEITSEMHVNICHVLKPPAVQ*PILCKV Trigger: TACCTTACACAGAATTGGTCATTGTACTGCCGGGGG...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTGGACAAAACCCCATATaGATACCACATCTTCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTAGQNPI*IPHLQM Trigger: CATTTGAAGATGTGGTATTCATATGGGGTTTTGTCC...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATATTGTGGTTACACTTaGGAAGTTCGTATAATGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KDYANLIAPLQFTGTAYPYCGYT*EVRIMP Trigger: AGGCATTATACGAACTTCTCAAGTGTAACCACAATA...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCAATCCTTGCATGTTTGTaGAGTTTAAAGAAACCTACC | + |
|
Preference number: 2 (lower is better) Translates to: KDYANLIAPLQFTGTAYPILACL*SLKKPT Trigger: GGTAGGTTTCTTTAAACTGCACAAACATGCAAGGAT...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAAATTAACACTTTGAACTaGAGTGCTCCAAACAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: FSTTLKRLTLINSNTTRKINTLN*SAPNKV Trigger: CACCTTGTTTGGAGCACTGCAGTTCAAAGTGTTAAT...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTAAGCAAGGATGTCATTaGAGTTCACAGTTTGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTAKQGCH*SSQFVQ Trigger: TTGCACAAACTGTGAACTGCAATGACATCCTTGCTT...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTACTTAATGTGCTACTaGGTAAACACTTCAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HLESIRKQHGAQATHCLLYLMCY*VNTSKQ Trigger: TTGCTTTGAAGTGTTTACGCAGTAGCACATTAAGTA...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAGCTGGTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKAGLSW*PLSTGF Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAACCAGC...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAATACGGCAAAAGGAGCTaGCATGAAAAGAGGCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: NKSEITSEMHVNICHVLKYGKRS*HEKRPH Trigger: ATGTGGCCTCTTTTCATGTCAGCTCCTTTTGCCGTA...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATTACGGCAAAAGGAGCTaGCATGAAAAGAGGCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: NWDNCNHWSSKRNINIYHYGKRS*HEKRPH Trigger: ATGTGGCCTCTTTTCATGTCAGCTCCTTTTGCCGTA...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAAAGTATATTAACACTTTaGACTGCAGTGCTCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: FSTTLKRLTLINSNTTRKSILTL*TAVLQT Trigger: TGTTTGGAGCACTGCAGTTCAAAGTGTTAATATACT...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAAATCCTTGCATGTTTGTaGAGTTTAAAGAAACCTACC | + |
|
Preference number: 2 (lower is better) Translates to: FSTTLKRLTLINSNTTRKILACL*SLKKPT Trigger: GGTAGGTTTCTTTAAACTGCACAAACATGCAAGGAT...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAAGGGCTTTGTAGACTGTaGCTTGCAAGTCAATTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: NKSEITSEMHVNICHVLKGLCRL*LASQLP Trigger: AGGCAATTGACTTGCAAGGCACAGTCTACAAAGCCC...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CAA 90 bp | GGGCATTTTCATGTAAGTGCAACTGGTATTAGCATTCAGTTATCTTaGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: GHFHVSATGISIQLS*YKSFIQTSHGKPRV Trigger: CACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAACTGAATGCTAATACCAGTTGCACTTACATGAAAATGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAACCTGGTCTGGAATTTTaGAACAGGATCCAAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKPGLEF*NRIQAS Trigger: ACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAGG...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTTACTTAATGTGCTACTaGGTAAACACTTCAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SGILKQDPSKCLLHLHTAYLMCY*VNTSKQ Trigger: TTGCTTTGAAGTGTTTACGCAGTAGCACATTAAGTA...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAATCCATGAAGCATCAGTaGATGTTCAAAGCTTCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: NKSEITSEMHVNICHVLKSMKHQ*MFKASA Trigger: TGCCGAAGCTTTGAACATGCACTGATGCTTCATGGA...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAAAGGTAGCCCTGGTCTaGAATTTTGAAACAGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKKVALV*NFETGS Trigger: GGATCCTGTTTCAAAATTCCAGACCAGGGCTACCTT...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CAA 90 bp | TTACAGCAGTACCTTTCAATTGCTTCTTTTATATTGTGGTTACACTaGAGAAGTTCGTATAATGCCTGTTCATTATCCCTGGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LQQYLSIASFILWLH*RSSYNACSLSLVCV Trigger: CACACACACCAGGGATAATGAACAGGCATTATACGAACTTCTCAAGTGTAACCACAATATAAAAGAAGCAATTGAAAGGTACTGCTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR CAA 90 bp | GATGCCTTTCCATTACAGCAGTACCTTTCAATTGCTTCTTTTATATaGTGGTTACACTTGAGAAGTTCGTATAATGCCTGTTCATTATCC | + |
|
Preference number: 2 (lower is better) Translates to: DAFPLQQYLSIASFI*WLHLRSSYNACSLS Trigger: GGATAATGAACAGGCATTATACGAACTTCTCAAGTGTAACCACAATATAAAAGAAGCAATTGAAAGGTACTGCTGTAATGGAAAGGCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAAAGCAAGGATGTCATTaGAGTTCACAGTTTGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKKQGCH*SSQFVQ Trigger: TTGCACAAACTGTGAACTGCAATGACATCCTTGCTT...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAAAATGGTCAAAGCTATaGCAATGGCTTCTTACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKKWSKL*QWLLTH Trigger: ATGAGTAAGAAGCCATTGTCATAGCTTTGACCATTT...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATAAATGGTCAAAGCTATaGCAATGGCTTCTTACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NWDNCNHWSSKRNINIYHKWSKL*QWLLTH Trigger: ATGAGTAAGAAGCCATTGTCATAGCTTTGACCATTT...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATATCCTTGCATGTTTGTaGAGTTTAAAGAAACCTACC | + |
|
Preference number: 2 (lower is better) Translates to: NWDNCNHWSSKRNINIYHILACL*SLKKPT Trigger: GGTAGGTTTCTTTAAACTGCACAAACATGCAAGGAT...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAATACTTAATGTGCTACTaGGTAAACACTTCAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKYLMCY*VNTSKQ Trigger: TTGCTTTGAAGTGTTTACGCAGTAGCACATTAAGTA...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAACCATTGTTTACTGTGTaGATACAGGAATACTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKPLFTV*IQEYSI Trigger: AATTGAGTATTCCTGTATGCACACAGTAAACAATGG...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | ACCAGGTCACACTCGTCAACGTCCACATCCTCCGAGTaGCCTGGACACACAGGATGGGCCAGCCGACACCGC | + |
|
Preference number: 3 (lower is better) Translates to: TRSHSSTSTSSE*PGHTGWASRHR Trigger: GCGGTGTCGGCTGGCCCATCCTGTGTGTCCAGGGCACTCGGAGGATGTGGACGTTGACGAGTGTGACCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CCA 72 bp | ACGTCCACATCCTCCGAGTGCCCTGGACACACAGGATaGGCCAGCCGACACCGCCACTGCTCACCATGGATT | + |
|
Preference number: 3 (lower is better) Translates to: TSTSSECPGHTG*ASRHRHCSPWI Trigger: AATCCATGGTGAGCAGTGGCGGTGTCGGCTGGCCCATCCTGTGTGTCCAGGGCACTCGGAGGATGTGGACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGTGTCCACGAGGCGTGTaGGCCAGCGGAGGAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWCPRGV*ASGGKL Trigger: CAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGACA...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGGGTACTGCATACCCATaGTCTCTGGGCTTCCCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWGTAYP*SLGFPF Trigger: GAACGGGAAGCCCAGAGACAATGGGTATGCAGTACC...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR TCA 72 bp | CGGGCTCAGGCCGGTTACAAGTTAAGGCTGAAGAACTaGCGGTACCACCCAGAGACTCTGTCTCATCTACGA | + |
|
Preference number: 3 (lower is better) Translates to: RAQAGYKLRLKN*RYHPETLSHLR Trigger: TCGTAGATGAGACAGAGTCTCTGGGTGGTACCGTCAGTTCTTCAGCCTTAACTTGTAACCGGCCTGAGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR TCA 72 bp | TCACTGGCAGTGAAGGAGCTGAGAATGTTCAGCGGCTaGTCAGGAACGGGCTCAGGCCGGTTACAAGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLAVKELRMFSG*SGTGSGRLQVK Trigger: CTTAACTTGTAACCGGCCTGAGCCCGTTCCTGATCAGCCGCTGAACATTCTCAGCTCCTTCACTGCCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGCCCTGGTCTGGAATTTaGAAACAGGATCCAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWPWSGI*KQDPSK Trigger: CTTGCTTGGATCCTGTTTCAAAATTCCAGACCAGGG...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGATTGCAGTTCACAGTTaGTGCAATAAATACCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWIAVHS*CNKYPP Trigger: GGGAGGGTATTTATTGCACAAACTGTGAACTGCAAT...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCTTCACAGCGGTGGGGTaGCAGACAGTTGCTACACTG | + |
|
Preference number: 3 (lower is better) Translates to: SNMEPRLPIVYCVHTGILFTAVG*QTVATL Trigger: CAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAA...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | GGATTCGGGGACAGCAATGCCCATCTTCAATCTCTTTaGTGGTCTTTCGGATTCTTCGCTGCACATGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GFGDSNAHLQSL*WSFGFFAAHGV Trigger: AACCCCATGTGCAGCGAAGAATCCGAAAGACCAGCAAAGAGATTGAAGATGGGCATTGCTGTCCCCGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR CCA 72 bp | GCGGAGGAAAGCTGTCATCCAGACAATTCACAGCGGTaGGGTTGCAGACAGTTGCTACACTGTTGGTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: AEESCHPDNSQR*GCRQLLHCWLK Trigger: CTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTCTGGATGACAGCTTTCCTCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACGGTACTGCATACCCATaGTCTCTGGGCTTCCCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVWNFETGSKQVSPSFAHGTAYP*SLGFPF Trigger: GAACGGGAAGCCCAGAGACAATGGGTATGCAGTACC...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCAGCCCAGGCTACCCATaGTTTACTGTGTGCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: SNMEPRLPIVYCVHTGILSPGYP*FTVCIQ Trigger: CTGTATGCACACAGTAAACAATGGGTAGCCTGGGCT...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGTCCAAATTTTGTCTGTaGAGCAAAGTAATCATAGCG | + |
|
Preference number: 3 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWSKFCL*SKVIIA Trigger: CGCTATGATTACTTTGCTCAACAGACAAAATTTGGA...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR TCA 72 bp | ATCCCACTGCATCCGTTACGGCAAAAGGAGCTGACATaGAAAGAGGCCACATCAGTTCTGAACATCTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IPLHPLRQKELT*KEATSVLNICA Trigger: AGCACAGATGTTCAGAACTGATGTGGCCTCTTTTCATGTCAGCTCCTTTTGCCGTAACGGATGCAGTGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | GACATGAAAAGAGGCCACATCAGTTCTGAACATCTGTaGTGGTTTGAGCTGGTGGCCTCTGTCTACAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DMKRGHISSEHL*WFELVASVYRF Trigger: AAACCTGTAGACAGAGGCCACCAGCTCAAACCAGCACAGATGTTCAGAACTGATGTGGCCTCTTTTCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | GAAAGCTGTCATCCAGACAATTCACAGCGGTGGGGTTaGAGACAGTTGCTACACTGTTGGTTAAAGCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ESCHPDNSQRWG*RQLLHCWLKLS Trigger: TGACAGCTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTCTGGATGACAGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR CCA 72 bp | AGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTaGTACTGCATACCCATTGTCTCTGGGCTTCCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLCKPDSSPSVY*YCIPIVSGLPV Trigger: AACGGGAAGCCCAGAGACAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CCA 72 bp | TGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTaGCAACTTCCTGGGCTTTGTAGACTGTGCCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CSKQGVPKCKPL*QLPGLCRLCLA Trigger: TGCAAGGCACAGTCTACAAAGCCCAGGAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCCCCTGGTCTGGAATTTaGAAACAGGATCCAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFPWSGI*KQDPSK Trigger: CTTGCTTGGATCCTGTTTCAAAATTCCAGACCAGGG...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR TCA 72 bp | TTCCAGTTCTCAATGAGGTCTCAACAAGGTACTCCTTaGCTTTGCTCTCCAAAAGCACACCAGGATGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: FQFSMRSQQGTP*LCSPKAHQDAT Trigger: TGTGGCATCCTGGTGTGCTTTTGGAGAGCAAAGTCAAGGAGTACCTTGTTGAGACCTCATTGAGAACTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | TGCATGTTCAAAGCTTCGGCACTCCTCTTCCGTCCATaGTGTCATTCCTTCTTGAGATGCCTTTCCATTACA | + |
|
Preference number: 3 (lower is better) Translates to: CMFKASALLFRP*CHSFLRCLSIT Trigger: TGTAATGGAAAGGCATCTCAAGAAGGAATGACAGCATGGACGGAAGAGGAGTGCCGAAGCTTTGAACATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCATTGCAGTTCACAGTTaGTGCAATAAATACCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SNMEPRLPIVYCVHTGILIAVHS*CNKYPP Trigger: GGGAGGGTATTTATTGCACAAACTGTGAACTGCAAT...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | AAACCACTGTGGCAACTTCCTGGGCTTTGTAGACTGTaGCTTGCAAGTCAATTGCCTCGGAACAAACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KPLWQLPGLCRL*LASQLPRNKLN Trigger: ATTTAGTTTGTTCCGAGGCAATTGACTTGCAAGGCACAGTCTACAAAGCCCAGGAAGTTGCCACAGTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | AAACACTGTTTCCATCTTACATCAAGACCCCAGCGATaGATAGATAAACTGTGCCAGCCAAAGAGAATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KHCFHLTSRPQR*IDKLCQPKRMG Trigger: GCCCATTCTCTTTGGCTGGCACAGTTTATCTATGCATCGCTGGGGTCTTGATGTAAGATGGAAACAGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTGAACAGGGATCGGGGTaGGTACCTGTAAACATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SGILKQDPSKCLLHLHTAEQGSG*VPVNID Trigger: ATCAATGTTTACAGGTACCAACCCCGATCCCTGTTC...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGAATAATAATGCTACATaGAACAGGGATCGGGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HLESIRKQHGAQATHCLLNNNAT*NRDRGW Trigger: CCAACCCCGATCCCTGTTCAATGTAGCATTATTATT...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCAATAATAATGCTACATaGAACAGGGATCGGGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFNNNAT*NRDRGW Trigger: CCAACCCCGATCCCTGTTCAATGTAGCATTATTATT...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCATTGCAGTTCACAGTTaGTGCAATAAATACCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFIAVHS*CNKYPP Trigger: GGGAGGGTATTTATTGCACAAACTGTGAACTGCAAT...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR TCA 72 bp | CAAAGTCAGCTACAGAGACAGCCATTTTGGCACTGGTaGTGTGATGTGTATGGTTTTCAAAGTCTACACCCA | + |
|
Preference number: 3 (lower is better) Translates to: QSQLQRQPFWHW*CDVYGFQSLHP Trigger: TGGGTGTAGACTTTGAAAACCATACACATCACATCACCAGTGCCAAAATGGCTGTCTCTGTAGCTGACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAGGTACTGCATACCCATaGTCTCTGGGCTTCCCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKGTAYP*SLGFPF Trigger: GAACGGGAAGCCCAGAGACAATGGGTATGCAGTACC...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATGGTACTGCATACCCATaGTCTCTGGGCTTCCCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NWDNCNHWSSKRNINIYHGTAYP*SLGFPF Trigger: GAACGGGAAGCCCAGAGACAATGGGTATGCAGTACC...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | TCTTCAATCTCTTTGCTGGTCTTTCGGATTCTTCGCTaGACATGGGGTTTAACTCTGAGTGATAAAATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSISLLVFRILR*TWGLTLSDKIQ Trigger: CTGGATTTTATCACTCAGAGTTAAACCCCATGTGCAGCGAAGAATCCGAAAGACCAGCAAAGAGATTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR CCA 72 bp | ATCTCTTTGCTGGTCTTTCGGATTCTTCGCTGCACATaGGGTTTAACTCTGAGTGATAAAATCCAGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ISLLVFRILRCT*GLTLSDKIQSQ Trigger: TTGAGACTGGATTTTATCACTCAGAGTTAAACCCCATGTGCAGCGAAGAATCCGAAAGACCAGCAAAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTAAAGCAAGGATGTCATaGCAGTTCACAGTTTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGILKQDPSKCLLHLHTAKARMS*QFTVCA Trigger: TGCACAAACTGTGAACTGCAATGACATCCTTGCTTT...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | GTTCGTATAATGCCTGTTCATTATCCCTGGTGTGTGTaGCTGAAGAAATCCTGTCTAGGACTTTTTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: VRIMPVHYPWCV*LKKSCLGLFHF Trigger: GAAATGAAAAAGTCCTAGACAGGATTTCTTCAGGCACACACACCAGGGATAATGAACAGGCATTATACGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR CCA 72 bp | CTAGTTCCTCATACTCACAGGGTACTTAGTTCAAACTaGGACAATTGCAATCACTGGTCATCTAAGAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVPHTHRVLSSN*DNCNHWSSKRN Trigger: ATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTTTGAACTAAGTACCCTGTGAGTATGAGGAACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAAGCCCAGGCTACCCATaGTTTACTGTGTGCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKSPGYP*FTVCIQ Trigger: CTGTATGCACACAGTAAACAATGGGTAGCCTGGGCT...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTAAGCTAGCTAACCACTaGGAGAGTATTAGAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SGILKQDPSKCLLHLHTAKLANH*ESIRKQ Trigger: TTGCTTTCTAATACTCTCCAAGTGGTTAGCTAGCTT...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAACCCTGGTCTGGAATTTaGAAACAGGATCCAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKPWSGI*KQDPSK Trigger: CTTGCTTGGATCCTGTTTCAAAATTCCAGACCAGGG...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATAGGTACTCCTTGACTTaGCTCTCCAAAAGCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: NWDNCNHWSSKRNINIYHRYSLT*LSKSTP Trigger: TGGTGTGCTTTTGGAGAGCAAAGTCAAGGAGTACCT...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATACAGTTGCTACACTGTaGGTTAAAGCTGTCAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NWDNCNHWSSKRNINIYHTVATL*VKAVRS Trigger: TGACCTGACAGCTTTAACCAACAGTGTAGCAACTGT...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAAATAATAATGCTACATaGAACAGGGATCGGGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKNNNAT*NRDRGW Trigger: CCAACCCCGATCCCTGTTCAATGTAGCATTATTATT...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR GCA 72 bp | CAGAGTGAAAAATATAGTTTTAACAATGCAAGAACATaGCCGGTATCCTCCTACATTAAAGAAAGTCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: QSEKYSFNNART*PVSSYIKESLL Trigger: CAGTAGACTTTCTTTAATGTAGGAGGATACCGGGCATGTTCTTGCATTGTTAAAACTATATTTTTCACTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGACTTGGGGAGCTGTTTaGACTGGAATTCGCAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWTWGAV*TGIRNR Trigger: GCGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGT...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGAGCTTAAAGCTGCACCACAGAGCTCCATCTTAGTTCCCAACTCTGCGTCATCAGCGGAAGACTaGGTTTCCTCGTCATCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EAELKAAPQSSILVPNSASSAED*VSSSSP Trigger: CGGCGATGACGAGGAAACTCAGTCTTCCGCTGATGA...CGCAGAGTTGGGAACTAAGATGGAGCTCTGTGGTGCAGCTTTAAGCTCTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGCGTTGGCAGACAAACTaGCAAAGTCAGCTACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWRWQTN*QSQLQR Trigger: TCTCTGTAGCTGACTTTGGCAGTTTGTCTGCCAACG...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCGTCCACGAGGCGTGTTaGCCAGCGGAGGAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNMEPRLPIVYCVHTGILVHEAC*PAEESC Trigger: ACAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGAC...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCGCGGCGTGCTGGTGCTaGTGCAGACTATGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFAACWC*CRLWAL Trigger: CAATGCCCATAGTCTGCATCAGCACCAGCACGCCGC...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGGCGGCGTGCTGGTGCTaGTGCAGACTATGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HLESIRKQHGAQATHCLLAACWC*CRLWAL Trigger: CAATGCCCATAGTCTGCATCAGCACCAGCACGCCGC...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGGGAATTCGCAACCGCTaGAATTGTAGATTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWGIRNR*NCRFIA Trigger: GGCTATGAATCTACAATTCCAGCGGTTGCGAATTCC...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGGTCCACGAGGCGTGTTaGCCAGCGGAGGAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLESIRKQHGAQATHCLLVHEAC*PAEESC Trigger: ACAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGAC...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCGTCCACGAGGCGTGTTaGCCAGCGGAGGAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFVHEAC*PAEESC Trigger: ACAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGAC...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCCGACAGGCACATGATTaGCGTGTCCACGAGGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFRQAHD*RVHEAC Trigger: ACACGCCTCGTGGACACGTCAATCATGTGCCTGTCG...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGAGCTTAAAGCTGCACCACAGAGCTCCATCTTAGTTCCCAACTCTGCGCTCCTCTTCCGTCCATaGTGTCATTCCTTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: EAELKAAPQSSILVPNSALLFRP*CHSLRC Trigger: GCATCTCAAGGAATGACAGCATGGACGGAAGAGGAG...CGCAGAGTTGGGAACTAAGATGGAGCTCTGTGGTGCAGCTTTAAGCTCTGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGATTCTTCGCTGCACATaGGGTTTAACTCTGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWILRCT*GLTLSD Trigger: ATCACTCAGAGTTAAACCCCATGTGCAGCGAAGAAT...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| 3UTR CAA 72 bp | ATAGCACGGCGAAGCACACGTGACGAAAGTAAAGTATaGCTCCAGTCACAGCACCAGGTCACACTCGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IARRSTRDESKV*LQSQHQVTLVN Trigger: GTTGACGAGTGTGACCTGGTGCTGTGACTGGAGCAATACTTTACTTTCGTCACGTGTGCTTCGCCGTGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CAA 72 bp | CATCCAGACAATTCACAGCGGTGGGGTTGCAGACAGTaGCTACACTGTTGGTTAAAGCTGTCAGGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPDNSQRWGCRQ*LHCWLKLSGHW Trigger: CCAGTGACCTGACAGCTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTCTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| 3UTR CAA 72 bp | AGGATTCGGGGACAGCAATGCCCATCTTCAATCTCTTaGCTGGTCTTTCGGATTCTTCGCTGCACATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RIRGQQCPSSIS*LVFRILRCTWG Trigger: ACCCCATGTGCAGCGAAGAATCCGAAAGACCAGCAAAGAGATTGAAGATGGGCATTGCTGTCCCCGAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACCGACAGGCACATGATTaGCGTGTCCACGAGGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVWNFETGSKQVSPSFAHRQAHD*RVHEAC Trigger: ACACGCCTCGTGGACACGTCAATCATGTGCCTGTCG...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGGTTACGACAGGCACATaGTTGACGTGTCCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLESIRKQHGAQATHCLLVTTGT*LTCPRG Trigger: GCCTCGTGGACACGTCAATCATGTGCCTGTCGTAAC...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCCATTGCTGGGCAGGGTaGGTAACTCTTCCGTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: SNMEPRLPIVYCVHTGILHCWAG*VTLPLR Trigger: TCGTAACGGAAGAGTTACTCACCCTGCCCAGCAATG...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGAGCTTAAAGCTGCACCACAGAGCTCCATCTTAGTTCCCAACTCTGCGCGTTGGCAGACAAACTaGCAAAGTCAGCTACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAELKAAPQSSILVPNSARWQTN*QSQLQR Trigger: TCTCTGTAGCTGACTTTGGCAGTTTGTCTGCCAACG...CGCAGAGTTGGGAACTAAGATGGAGCTCTGTGGTGCAGCTTTAAGCTCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGAGCTTAAAGCTGCACCACAGAGCTCCATCTTAGTTCCCAACTCTGCGGTGGGGTCAAAGTCATaGTCCTCAGAAGACAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EAELKAAPQSSILVPNSAVGSKS*SSEDKD Trigger: GTCTTTGTCTTCTGAGGACCATGACTTTGACCCCAC...CGCAGAGTTGGGAACTAAGATGGAGCTCTGTGGTGCAGCTTTAAGCTCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CAA 72 bp | ATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTaGCACACAGCTCCTCGCGCCGGCTTCCAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILKQDPSKCLLH*HTAPRAGFQTD Trigger: ATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CAA 72 bp | GGAAAGCTGTCATCCAGACAATTCACAGCGGTGGGGTaGCAGACAGTTGCTACACTGTTGGTTAAAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLSSRQFTAVG*QTVATLLVKAV Trigger: GACAGCTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAATTGTCTGGATGACAGCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAACGACAGGCACATGATTaGCGTGTCCACGAGGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTTLKRLTLINSNTTRKRQAHD*RVHEAC Trigger: ACACGCCTCGTGGACACGTCAATCATGTGCCTGTCG...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGACTTGGGGAGCTGTTTaGACTGGAATTCGCAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLESIRKQHGAQATHCLLTWGAV*TGIRNR Trigger: GCGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGT...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR GCA 90 bp | GACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTGACTTGGGGAGCTGTTTaGACTGGAATTCGCAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: DYANLIAPLQFTGTAYPLTWGAV*TGIRNR Trigger: GCGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGT...CAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR GCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCCTCCTCTTCCGTCCATaGTGTCATTCCTTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SNMEPRLPIVYCVHTGILLLFRP*CHSLRC Trigger: GCATCTCAAGGAATGACAGCATGGACGGAAGAGGAG...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGAGCTTAAAGCTGCACCACAGAGCTCCATCTTAGTTCCCAACTCTGCGGGAATTCGCAACCGCTaGAATTGTAGATTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAELKAAPQSSILVPNSAGIRNR*NCRFIA Trigger: GGCTATGAATCTACAATTCCAGCGGTTGCGAATTCC...CGCAGAGTTGGGAACTAAGATGGAGCTCTGTGGTGCAGCTTTAAGCTCTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTTCATCAGCGGAAGACTaGGTTTCCTCGTCATCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGILKQDPSKCLLHLHTASSAED*VSSSSP Trigger: CGGCGATGACGAGGAAACTCAGTCTTCCGCTGATGA...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCACATTGCTGGGCAGGGTaGGTAACTCTTCCGTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: KDYANLIAPLQFTGTAYPHCWAG*VTLPLR Trigger: TCGTAACGGAAGAGTTACTCACCCTGCCCAGCAATG...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGGCGGCGTGCTGGTGCTaGTGCAGACTATGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTAACWC*CRLWAL Trigger: CAATGCCCATAGTCTGCATCAGCACCAGCACGCCGC...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | GACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTGGTCTGCAAGTTCACTTaGGGAGCTGTTTGCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DYANLIAPLQFTGTAYPLVCKFT*GAVCTG Trigger: TCCAGTGCAAACAGCTCCCCAAGTGAACTTGCAGAC...CAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR GCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCTCCATGAAGCATCAGTaGATGTTCAAAGCTTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNMEPRLPIVYCVHTGILSMKHQ*MFKASA Trigger: TGCCGAAGCTTTGAACATGCACTGATGCTTCATGGA...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCTTTCGGATTCTTCGCTaGACATGGGGTTTAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNMEPRLPIVYCVHTGILFRILR*TWGLTL Trigger: CAGAGTTAAACCCCATGTGCAGCGAAGAATCCGAAA...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| 3UTR CAA 72 bp | AGGACCACTACCTCCTACCTACTCTTCAGCACGACCTaGAAGCGACTCACACTTATAAACAGCAACACAACT | + |
|
Preference number: 4 (lower is better) Translates to: RTTTSYLLFSTT*KRLTLINSNTT Trigger: AGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAAGAGTAGGTAGGAGGTAGTGGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| 3UTR CAA 72 bp | TTTCCAGTTCTCAATGAGGTCTCAACAAGGTACTCCTaGACTTTGCTCTCCAAAAGCACACCAGGATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPVLNEVSTRYS*TLLSKSTPGCH Trigger: GTGGCATCCTGGTGTGCTTTTGGAGAGCAAAGTCAAGGAGTACCTTGTTGAGACCTCATTGAGAACTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| CDS-3UTR TCA 90 bp | GACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTGCAACAAGGTACTCCTTaGCTTTGCTCTCCAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DYANLIAPLQFTGTAYPLQQGTP*LCSPKA Trigger: TGCTTTTGGAGAGCAAAGTCAAGGAGTACCTTGTTG...CAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGGTTACGACAGGCACATaGTTGACGTGTCCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTVTTGT*LTCPRG Trigger: GCCTCGTGGACACGTCAATCATGTGCCTGTCGTAAC...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | GACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTGTTTCGGATTCTTCGCTaGACATGGGGTTTAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DYANLIAPLQFTGTAYPLFRILR*TWGLTL Trigger: CAGAGTTAAACCCCATGTGCAGCGAAGAATCCGAAA...CAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGATTCGGGGACAGCAATaGCCATCTTCAATCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLESIRKQHGAQATHCLLIRGQQ*PSSISL Trigger: CAAAGAGATTGAAGATGGGCATTGCTGTCCCCGAAT...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | GACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTGATTCGGGGACAGCAATaGCCATCTTCAATCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DYANLIAPLQFTGTAYPLIRGQQ*PSSISL Trigger: CAAAGAGATTGAAGATGGGCATTGCTGTCCCCGAAT...CAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACCTCCTCTTCCGTCCATaGTGTCATTCCTTCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSERLCKPDSSPSVYWYLLFRP*CHSFLR Trigger: TCTCAAGAAGGAATGACAGCATGGACGGAAGAGGAG...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCATCCGTTTGTCTCGTTaGCAGACAAACTGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFIRLSR*QTNCQS Trigger: ACTTTGGCAGTTTGTCTGCCAACGAGACAAACGGAT...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACGTGGGGTCAAAGTCATaGTCCTCAGAAGACAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVWNFETGSKQVSPSFAHVGSKS*SSEDKD Trigger: GTCTTTGTCTTCTGAGGACCATGACTTTGACCCCAC...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACCATGCTGTCATTCCTTaGGATGCCTTTCCATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVWNFETGSKQVSPSFAHHAVIP*DAFPLQ Trigger: CTGTAATGGAAAGGCATCTCAAGGAATGACAGCATG...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGCATTGCTGGGCAGGGTaGGTAACTCTTCCGTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTHCWAG*VTLPLR Trigger: TCGTAACGGAAGAGTTACTCACCCTGCCCAGCAATG...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTTGGCACTGGTGATGTaGTGTGTATGGTTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLESIRKQHGAQATHCLLLALVM*CVWFSK Trigger: CTTTGAAAACCATACACATCACATCACCAGTGCCAA...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATCCATGAAGCATCAGTaGATGTTCAAAGCTTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDYANLIAPLQFTGTAYPSMKHQ*MFKASA Trigger: TGCCGAAGCTTTGAACATGCACTGATGCTTCATGGA...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCCATCTTCAATCTCTTTaGTGGTCTTTCGGATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNMEPRLPIVYCVHTGILHLQSL*WSFGFF Trigger: GAAGAATCCGAAAGACCAGCAAAGAGATTGAAGATG...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACATTCGGGGACAGCAATaGCCATCTTCAATCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSERLCKPDSSPSVYWYIRGQQ*PSSISL Trigger: CAAAGAGATTGAAGATGGGCATTGCTGTCCCCGAAT...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCAGGAATTCGCAACCGCTaGAATTGTAGATTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDYANLIAPLQFTGTAYPGIRNR*NCRFIA Trigger: GGCTATGAATCTACAATTCCAGCGGTTGCGAATTCC...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACCAGTTGCTACACTGTTaGTTAAAGCTGTCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVWNFETGSKQVSPSFAHQLLHC*LKLSGH Trigger: GTGACCTGACAGCTTTAACCAACAGTGTAGCAACTG...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACATCCGTTTGTCTCGTTaGCAGACAAACTGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSERLCKPDSSPSVYWYIRLSR*QTNCQS Trigger: ACTTTGGCAGTTTGTCTGCCAACGAGACAAACGGAT...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTCAACAAGGTACTCCTTaGCTTTGCTCTCCAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGILKQDPSKCLLHLHTAQQGTP*LCSPKA Trigger: TGCTTTTGGAGAGCAAAGTCAAGGAGTACCTTGTTG...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAGTTACGACAGGCACATaGTTGACGTGTCCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKVTTGT*LTCPRG Trigger: GCCTCGTGGACACGTCAATCATGTGCCTGTCGTAAC...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTGGCACTGGTGATGTaGTGTGTATGGTTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KDYANLIAPLQFTGTAYPLALVM*CVWFSK Trigger: CTTTGAAAACCATACACATCACATCACCAGTGCCAA...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACCCATTTTGGCACTGGTaGTGTGATGTGTATGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSSERLCKPDSSPSVYWYPFWHW*CDVYGF Trigger: AAAACCATACACATCACATCACCAGTGCCAAAATGG...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTCATTCCTTGAGATaGCTTTCCATTACAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLESIRKQHGAQATHCLLCHSLR*LSITAV Trigger: TACTGCTGTAATGGAAAGGCATCTCAAGGAATGACA...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAACAGTTGCTACACTGTTaGTTAAAGCTGTCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTTLKRLTLINSNTTRKQLLHC*LKLSGH Trigger: GTGACCTGACAGCTTTAACCAACAGTGTAGCAACTG...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACATTCTTCGCTGCACATaGGGTTTAACTCTGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSSERLCKPDSSPSVYWYILRCT*GLTLSD Trigger: ATCACTCAGAGTTAAACCCCATGTGCAGCGAAGAAT...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAAATCCGTTTGTCTCGTTaGCAGACAAACTGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTTLKRLTLINSNTTRKIRLSR*QTNCQS Trigger: ACTTTGGCAGTTTGTCTGCCAACGAGACAAACGGAT...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCTATTGTGGTTACACTTaGGAAGTTCGTATAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFYCGYT*EVRIMP Trigger: AGGCATTATACGAACTTCTCAAGTGTAACCACAATA...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAACCATTTTGGCACTGGTaGTGTGATGTGTATGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSTTLKRLTLINSNTTRKPFWHW*CDVYGF Trigger: AAAACCATACACATCACATCACCAGTGCCAAAATGG...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | AACTGGGACAATTGCAATCACTGGTCATCTAAGAGGAATATTAATATCTACCATACTTGGGGAGCTGTTTaGACTGGAATTCGCAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: NWDNCNHWSSKRNINIYHTWGAV*TGIRNR Trigger: GCGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGT...ATGGTAGATATTAATATTCCTCTTAGATGACCAGTGATTGCAATTGTCCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR GCA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATGTCATTCCTTGAGATaGCTTTCCATTACAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KDYANLIAPLQFTGTAYPCHSLR*LSITAV Trigger: TACTGCTGTAATGGAAAGGCATCTCAAGGAATGACA...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
||
| CDS-3UTR GCA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACCATCTTCAATCTCTTTaGTGGTCTTTCGGATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSSERLCKPDSSPSVYWYHLQSL*WSFGFF Trigger: GAAGAATCCGAAAGACCAGCAAAGAGATTGAAGATG...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTATTGTGGTTACACTTaGGAAGTTCGTATAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSSERLCKPDSSPSVYWYYCGYT*EVRIMP Trigger: AGGCATTATACGAACTTCTCAAGTGTAACCACAATA...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACTATTGTGGTTACACTTaGGAAGTTCGTATAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVWNFETGSKQVSPSFAHYCGYT*EVRIMP Trigger: AGGCATTATACGAACTTCTCAAGTGTAACCACAATA...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGCATGCTGTCATTCCTTaGGATGCCTTTCCATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTHAVIP*DAFPLQ Trigger: CTGTAATGGAAAGGCATCTCAAGGAATGACAGCATG...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGCACGACCTTGAAGCGACTCACACTTATAAACAGCAACACAACTAGGAAACATTCCTTCTTGAGATaGCTTTCCATTACAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSTTLKRLTLINSNTTRKHSFLR*LSITAV Trigger: TACTGCTGTAATGGAAAGGCATCTCAAGAAGGAATG...TTTCCTAGTTGTGTTGCTGTTTATAAGTGTGAGTCGCTTCAAGGTCGTGCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTTGAGATGCCTTTCCATTACAGCAGTACCTTTCAATTGCTTCTTTTATGTGGGGTCAAAGTCATaGTCCTCAGAAGACAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFLRCLSITAVPFNCFFYVGSKS*SSEDKD Trigger: GTCTTTGTCTTCTGAGGACCATGACTTTGACCCCAC...ATAAAAGAAGCAATTGAAAGGTACTGCTGTAATGGAAAGGCATCTCAAGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| CDS-3UTR GCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAACGTTGGCAGACAAACTaGCAAAGTCAGCTACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKRWQTN*QSQLQR Trigger: TCTCTGTAGCTGACTTTGGCAGTTTGTCTGCCAACG...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAATATCCCTGGTGTGTGTaGCTGAAGAAATCCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKYPWCV*LKKSCL Trigger: TAGACAGGATTTCTTCAGGCACACACACCAGGGATA...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAATCCATGAAGCATCAGTaGATGTTCAAAGCTTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKSMKHQ*MFKASA Trigger: TGCCGAAGCTTTGAACATGCACTGATGCTTCATGGA...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGCATCTTCAATCTCTTTaGTGGTCTTTCGGATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTHLQSL*WSFGFF Trigger: GAAGAATCCGAAAGACCAGCAAAGAGATTGAAGATG...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAAGGAATTCGCAACCGCTaGAATTGTAGATTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKSEITSEMHVNICHVLKGIRNR*NCRFIA Trigger: GGCTATGAATCTACAATTCCAGCGGTTGCGAATTCC...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAACAGTTGCTACACTGTTaGTTAAAGCTGTCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKSEITSEMHVNICHVLKQLLHC*LKLSGH Trigger: GTGACCTGACAGCTTTAACCAACAGTGTAGCAACTG...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAATTGGCACTGGTGATGTaGTGTGTATGGTTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKLALVM*CVWFSK Trigger: CTTTGAAAACCATACACATCACATCACCAGTGCCAA...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAAATTCTTCGCTGCACATaGGGTTTAACTCTGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKILRCT*GLTLSD Trigger: ATCACTCAGAGTTAAACCCCATGTGCAGCGAAGAAT...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| 3UTR CAA 72 bp | CCATTACAGCAGTACCTTTCAATTGCTTCTTTTATATaGTGGTTACACTTGAGAAGTTCGTATAATGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQQYLSIASFI*WLHLRSSYNAC Trigger: ACAGGCATTATACGAACTTCTCAAGTGTAACCACAATATAAAAGAAGCAATTGAAAGGTACTGCTGTAATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGAGCTTAAAGCTGCACCACAGAGCTCCATCTTAGTTCCCAACTCTGCGTGTCCACGAGGCGTGTaGGCCAGCGGAGGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAELKAAPQSSILVPNSACPRGV*ASGGKL Trigger: CAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGACA...CGCAGAGTTGGGAACTAAGATGGAGCTCTGTGGTGCAGCTTTAAGCTCTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTCCACGAGGCGTGTaGGCCAGCGGAGGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLESIRKQHGAQATHCLLCPRGV*ASGGKL Trigger: CAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGACA...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTTGTCCACGAGGCGTGTaGGCCAGCGGAGGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGILKQDPSKCLLHLHTACPRGV*ASGGKL Trigger: CAGCTTTCCTCCGCTGGCCAACACGCCTCGTGGACA...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTCTCCTTCATTTGCACACAGCTCCTCGCGCCGGCTTCCAGACAGATGGCCATCTTCAATCTCTTaGCTGGTCTTTCGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVSPSFAHSSSRRLPDRWPSSIS*LVFRIL Trigger: AAGAATCCGAAAGACCAGCAAAGAGATTGAAGATGG...CCATCTGTCTGGAAGCCGGCGCGAGGAGCTGTGTGCAAATGAAGGAGACACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | GACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTGCACTTGGGGAGCTGTTaGCACTGGAATTCGCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: DYANLIAPLQFTGTAYPLHLGSC*HWNSQP Trigger: CGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGTG...CAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACCACTTGGGGAGCTGTTaGCACTGGAATTCGCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: TSSERLCKPDSSPSVYWYHLGSC*HWNSQP Trigger: CGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGTG...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACCACTTGGGGAGCTGTTaGCACTGGAATTCGCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: LVWNFETGSKQVSPSFAHHLGSC*HWNSQP Trigger: CGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGTG...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCAATCTCTTTGCTGGTCTTTCGGATTCTTCGCTGCACATGGGGTTTAACTCACTTGGGGAGCTGTTaGCACTGGAATTCGCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: SSISLLVFRILRCTWGLTHLGSC*HWNSQP Trigger: CGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGTG...AGTTAAACCCCATGTGCAGCGAAGAATCCGAAAGACCAGCAAAGAGATTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137268.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGAGCTTAAAGCTGCACCACAGAGCTCCATCTTAGTTCCCAACTCTGCGTCAACAAGGTACTCCTaGACTTTGCTCTCCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EAELKAAPQSSILVPNSASTRYS*TLLSKS Trigger: GCTTTTGGAGAGCAAAGTCAAGGAGTACCTTGTTGA...CGCAGAGTTGGGAACTAAGATGGAGCTCTGTGGTGCAGCTTTAAGCTCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTCACAGCGGTGGGGTaGCAGACAGTTGCTACACTG | + |
|
Preference number: 5 (lower is better) Translates to: KDYANLIAPLQFTGTAYPFTAVG*QTVATL Trigger: CAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAA...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTTTCACAGCGGTGGGGTaGCAGACAGTTGCTACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGILKQDPSKCLLHLHTAFTAVG*QTVATL Trigger: CAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAA...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS CCA 90 bp | CTAGAGTTCTTTCATCATCATAGTCATGAACTAGCATCTCAGCAGTaGGGTCAAAGTCATGGTCCTCAGAAGACAAAGACCCAACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEFFHHHSHELASQQ*GQSHGPQKTKTQLG Trigger: GCCCAGTTGGGTCTTTGTCTTCTGAGGACCATGACTTTGACCCCACTGCTGAGATGCTAGTTCATGACTATGATGATGAAAGAACTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 |
||
| CDS-3UTR CAA 90 bp | AGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGTGCATACAGGAATACTCCCATGCTGTCATTCCTaGAGATGCCTTTCCATTACA | + |
|
Preference number: 5 (lower is better) Translates to: SNMEPRLPIVYCVHTGILPCCHS*RCLSIT Trigger: TGTAATGGAAAGGCATCTCAAGGAATGACAGCATGG...GAGTATTCCTGTATGCACACAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
||
| CDS-3UTR CAA 90 bp | CACTTGGAGAGTATTAGAAAGCAACATGGAGCCCAGGCTACCCATTGTTTACTGTGGGGTTGCAGACAGTaGCTACACTGTTGGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLESIRKQHGAQATHCLLWGCRQ*LHCWLK Trigger: CTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCA...CAGTAAACAATGGGTAGCCTGGGCTCCATGTTGCTTTCTAATACTCTCCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGGTACTCCTTGACTTaGCTCTCCAAAAGCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: LVWNFETGSKQVSPSFAHRYSLT*LSKSTP Trigger: TGGTGTGCTTTTGGAGAGCAAAGTCAAGGAGTACCT...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGGGGTTGCAGACAGTaGCTACACTGTTGGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSERLCKPDSSPSVYWYWGCRQ*LHCWLK Trigger: CTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCA...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
||
| CDS-3UTR CAA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACTGGGGTTGCAGACAGTaGCTACACTGTTGGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVWNFETGSKQVSPSFAHWGCRQ*LHCWLK Trigger: CTTTAACCAACAGTGTAGCAACTGTCTGCAACCCCA...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTCAATCACTTTCACCATaGCTGGGCAGGGTGAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: SGILKQDPSKCLLHLHTAQSLSP*LGRVSN Trigger: GTTACTCACCCTGCCCAGCAATGGTGAAAGTGATTG...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATCAACAAGGTACTCCTaGACTTTGCTCTCCAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: KDYANLIAPLQFTGTAYPSTRYS*TLLSKS Trigger: GCTTTTGGAGAGCAAAGTCAAGGAGTACCTTGTTGA...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACACAGTTGCTACACTGTaGGTTAAAGCTGTCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TSSERLCKPDSSPSVYWYTVATL*VKAVRS Trigger: TGACCTGACAGCTTTAACCAACAGTGTAGCAACTGT...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCAACAGTTGCTACACTGTaGGTTAAAGCTGTCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: KDYANLIAPLQFTGTAYPTVATL*VKAVRS Trigger: TGACCTGACAGCTTTAACCAACAGTGTAGCAACTGT...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCCCATCTTCAATCTCTTaGCTGGTCTTTCGGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFPSSIS*LVFRIL Trigger: AAGAATCCGAAAGACCAGCAAAGAGATTGAAGATGG...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAATTCACAGCGGTGGGGTaGCAGACAGTTGCTACACTG | + |
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Preference number: 5 (lower is better) Translates to: NKSEITSEMHVNICHVLKFTAVG*QTVATL Trigger: CAGTGTAGCAACTGTCTGCAACCCCACCGCTGTGAA...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGCAATCACTTTCACCATaGCTGGGCAGGGTGAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTQSLSP*LGRVSN Trigger: GTTACTCACCCTGCCCAGCAATGGTGAAAGTGATTG...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCAAAGTCTACACCCAGGTaGTTTACAGAAACCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: KDYANLIAPLQFTGTAYPKSTPR*FTETSF Trigger: GAATGAGGTTTCTGTAAACAACCTGGGTGTAGACTT...TGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACAAGTCTACACCCAGGTaGTTTACAGAAACCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: TSSERLCKPDSSPSVYWYKSTPR*FTETSF Trigger: GAATGAGGTTTCTGTAAACAACCTGGGTGTAGACTT...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAAGTCTACACCCAGGTaGTTTACAGAAACCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: LVWNFETGSKQVSPSFAHKSTPR*FTETSF Trigger: GAATGAGGTTTCTGTAAACAACCTGGGTGTAGACTT...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | CTGGTCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACTGCTGTCATTCCTTCTaGAGATGCCTTTCCATTACA | + |
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Preference number: 5 (lower is better) Translates to: LVWNFETGSKQVSPSFAHCCHSF*RCLSIT Trigger: TGTAATGGAAAGGCATCTCAAGAAGGAATGACAGCA...GTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109272.9 |
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| CDS GCA 90 bp | AAAGCTTCGGCACTCCTCTTCCGTCCATGCTGTCATTCCTTGAGATaGCTTTCCATTACAGCAGTACCTTTCAATTGCTTCTTTTATATT | + |
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Preference number: 5 (lower is better) Translates to: KASALLFRPCCHSLR*LSITAVPFNCFFYI Trigger: AATATAAAAGAAGCAATTGAAAGGTACTGCTGTAATGGAAAGGCATCTCAAGGAATGACAGCATGGACGGAAGAGGAGTGCCGAAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
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| CDS-3UTR CAA 90 bp | GACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACTGCATACCCATTGATATTGTGGTTACACTaGAGAAGTTCGTATAATGCC | + |
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Preference number: 5 (lower is better) Translates to: DYANLIAPLQFTGTAYPLILWLH*RSSYNA Trigger: GGCATTATACGAACTTCTCAAGTGTAACCACAATAT...CAATGGGTATGCAGTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AACTGCAGTGCTCCAAACAAGGTGTCCCAAAATGTAAACCACTGTGGCAACTTCTCCAAATTTTGTCTGTaGAGCAAAGTAATCATAGCG | + |
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Preference number: 5 (lower is better) Translates to: NCSAPNKVSQNVNHCGNFSKFCL*SKVIIA Trigger: CGCTATGATTACTTTGCTCAACAGACAAAATTTGGA...GAAGTTGCCACAGTGGTTTACATTTTGGGACACCTTGTTTGGAGCACTGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | ACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTTCAGTTTACTGGTACATATTGTGGTTACACTaGAGAAGTTCGTATAATGCC | + |
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Preference number: 5 (lower is better) Translates to: TSSERLCKPDSSPSVYWYILWLH*RSSYNA Trigger: GGCATTATACGAACTTCTCAAGTGTAACCACAATAT...GTACCAGTAAACTGAAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAACAATCACTTTCACCATaGCTGGGCAGGGTGAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: NKSEITSEMHVNICHVLKQSLSP*LGRVSN Trigger: GTTACTCACCCTGCCCAGCAATGGTGAAAGTGATTG...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAATTTTGAAACAGGATCCAAGCAAGTGTCTCCTTCATTTGCACACAGCTTCCAAATTTTGTCTGTaGAGCAAAGTAATCATAGCG | + |
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Preference number: 5 (lower is better) Translates to: SGILKQDPSKCLLHLHTASKFCL*SKVIIA Trigger: CGCTATGATTACTTTGCTCAACAGACAAAATTTGGA...AGCTGTGTGCAAATGAAGGAGACACTTGCTTGGATCCTGTTTCAAAATTCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | TTATCTTTGTATAAATCATTTATACAGACCAGCCACGGTAAACCCAGAGTGAAACCATGCTGTCATTCCTaGAGATGCCTTTCCATTACA | + |
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Preference number: 5 (lower is better) Translates to: LSLYKSFIQTSHGKPRVKPCCHS*RCLSIT Trigger: TGTAATGGAAAGGCATCTCAAGGAATGACAGCATGG...TTTCACTCTGGGTTTACCGTGGCTGGTCTGTATAAATGATTTATACAAAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 |
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| CDS-3UTR CAA 90 bp | AATAAAAGTGAAATCACGTCTGAGATGCACGTGAACATCTGTCACGTTTTAAAAACAGTTGCTACACTGTaGGTTAAAGCTGTCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: NKSEITSEMHVNICHVLKTVATL*VKAVRS Trigger: TGACCTGACAGCTTTAACCAACAGTGTAGCAACTGT...TTTTAAAACGTGACAGATGTTCACGTGCATCTCAGACGTGATTTCACTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS-3UTR CAA 90 bp | AATGGCTTCTTACTCATGTTTGGAATAAAAGTGAAATCACGTCTGAGATGCACGATATTGTGGTTACACTaGAGAAGTTCGTATAATGCC | + |
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Preference number: 5 (lower is better) Translates to: NGFLLMFGIKVKSRLRCTILWLH*RSSYNA Trigger: GGCATTATACGAACTTCTCAAGTGTAACCACAATAT...CGTGCATCTCAGACGTGATTTCACTTTTATTCCAAACATGAGTAAGAAGCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 |
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| CDS CAA 72 bp | CTAGAGTCATGTCTGGTAGTTCGTCTGCAAGTTCACTaGGGGAGCTGTTTGCACTGGAATTCGCAACCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LESCLVVRLQVH*GSCLHWNSQPL Trigger: CAGCGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGTGAACTTGCAGACGAACTACCAGACATGACTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 ENSMUST00000231273.2 ENSMUST00000231979.2 |
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| CDS CCA 72 bp | ACTTGGGGAGCTGTTTGCACTGGAATTCGCAACCGCTaGAATTGTAGATTCATAGCCGTAGAACGCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: TWGAVCTGIRNR*NCRFIAVERQQ Trigger: CTGTTGGCGTTCTACGGCTATGAATCTACAATTCCAGCGGTTGCGAATTCCAGTGCAAACAGCTCCCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 ENSMUST00000231273.2 ENSMUST00000231979.2 |
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| CDS CAA 72 bp | TCATCGCCGGACAGCAGGTCTTTCGCGATCTCTTCTTaGTCTAGAGTCATGTCTGGTAGTTCGTCTGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSPDSRSFAISS*SRVMSGSSSAS Trigger: ACTTGCAGACGAACTACCAGACATGACTCTAGACAAAGAAGAGATCGCGAAAGACCTGCTGTCCGGCGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000231273.2 ENSMUST00000231979.2 |
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| CDS TCA 72 bp | TGTTCCCTTCCTTCTCTAAGTCTTCAATTTCAGAGCTaGAGTTCTTCCCGTCGTCCATCAACTCTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSLPSLSLQFQS*SSSRRPSTLLP Trigger: AGGAAGAAGAGTTGATGGACGACGGGAAGAACTTCAGCTCTGAAATTGAAGACTTAGAGAAGGAAGGGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000047412.11 ENSMUST00000109271.3 ENSMUST00000109272.9 ENSMUST00000137268.8 ENSMUST00000231273.2 ENSMUST00000231979.2 |
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