Pregenerated sensors for MIER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028522Ensembl transcript IDs: ENSMUST00000030247.11, ENSMUST00000097945.10, ENSMUST00000106855.2, ENSMUST00000106857.8, ENSMUST00000106858.8
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATACTCTaGGGGAGAGGCCTGGGCGATCATTCTCAGTGCGAACCTTTACCC | + |
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Preference number: 1 (lower is better) Translates to: LVEGKEAVWTNLRIL*GRGLGDHSQCEPLP Trigger: GGGTAAAGGTTCGCACTGAGAATGATCGCCCAGGCCTCTCCCTCAGAGTATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR TCA 90 bp | TGCTGGGTGTGGTGGGAAACACCTTCAATCTCAGCATTAGAGGGCTaGGGTAGAAGGATTGTTAAGTTCCAGGCCAGCCTGGGCTACACA | + |
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Preference number: 1 (lower is better) Translates to: CWVWWETPSISALEG*GRRIVKFQASLGYT Trigger: TGTGTAGCCCAGGCTGGCCTGGAACTTAACAATCCTTCTACCTCAGCCCTCTAATGCTGAGATTGAAGGTGTTTCCCACCACACCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR TCA 90 bp | CGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTaGGCCTGTGAAAGGAGCACAGATCTGCCTTTGAGAGCATTGGCT | + |
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Preference number: 1 (lower is better) Translates to: RSFSVRTFTQPASDN*ACERSTDLPLRALA Trigger: AGCCAATGCTCTCAAAGGCAGATCTGTGCTCCTTTCACAGGCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR TCA 90 bp | CAAAGGAAAATGACAATGCTAACTACCAACAGAGACATTTCTGTTTaGGGCAGCATCTCAGGTATCTCAGGCTTGCCTCCAACTCACTAT | + |
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Preference number: 1 (lower is better) Translates to: QRKMTMLTTNRDISV*GSISGISGLPPTHY Trigger: ATAGTGAGTTGGAGGCAAGCCTGAGATACCTGAGATGCTGCCTCAAACAGAAATGTCTCTGTTGGTAGTTAGCATTGTCATTTTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR CCA 90 bp | TCAAGAACTCTAGGAACTTGCCCAGCAGTTGTAGCCTTTAAAAGGTaGGCTGACACCTCCAATAGTGTAATGATTAAAAAGCATCACTGT | + |
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Preference number: 1 (lower is better) Translates to: SRTLGTCPAVVAFKR*ADTSNSVMIKKHHC Trigger: ACAGTGATGCTTTTTAATCATTACACTATTGGAGGTGTCAGCCCACCTTTTAAAGGCTACAACTGCTGGGCAAGTTCCTAGAGTTCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR TCA 90 bp | GGTGGGCAGGGAAACAGAGGCTATGATCCATCTGCTAAAGCTACTTaGCCTACTGCCATTCTGGATAAATTAATGGTTTTCAATAAAACA | + |
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Preference number: 1 (lower is better) Translates to: GGQGNRGYDPSAKAT*PTAILDKLMVFNKT Trigger: TGTTTTATTGAAAACCATTAATTTATCCAGAATGGCAGTAGGTCAAGTAGCTTTAGCAGATGGATCATAGCCTCTGTTTCCCTGCCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR TCA 90 bp | CACGTTGGGCAAAACAGTCAAACTACTGAGCTACATCCCTACTCCTaGAGGCTTATTTTCTCATCTCAATTACTTAAGTGCTCAAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: HVGQNSQTTELHPYS*RLIFSSQLLKCSRV Trigger: AACTCTTGAGCACTTAAGTAATTGAGATGAGAAAATAAGCCTTCAGGAGTAGGGATGTAGCTCAGTAGTTTGACTGTTTTGCCCAACGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR GCA 90 bp | TTCTGCAAAAACAATAAATGCATATTATGTGATGTACTGTCAAAGTaGCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAAT | + |
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Preference number: 1 (lower is better) Translates to: FCKNNKCILCDVLSK*LPILVEGKEAVWTN Trigger: ATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCACTTTGACAGTACATCACATAATATGCATTTATTGTTTTTGCAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR GCA 90 bp | TGCTTCTTAGCACTTCCATCTGAAACTGACTTACTGGGATATTTCTaGAAAAACAATAAATGCATATTATGTGATGTACTGTCAAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: CFLALPSETDLLGYF*KNNKCILCDVLSKC Trigger: GCACTTTGACAGTACATCACATAATATGCATTTATTGTTTTTGCAGAAATATCCCAGTAAGTCAGTTTCAGATGGAAGTGCTAAGAAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTAGAAATGGGTGGGGGTaGGCAGGGAAACAGAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQARNGWG*AGKQRL Trigger: TAGCCTCTGTTTCCCTGCCCACCCCCACCCATTTCT...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTCCTGCATCAGACAACTaGGCCTGTGAAAGGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQAPASDN*ACERST Trigger: TGTGCTCCTTTCACAGGCTCAGTTGTCTGATGCAGG...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACAGACAACTGAGCCTGTaGAAGGAGCACAGATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHRQLSL*KEHRSA Trigger: GGCAGATCTGTGCTCCTTTCACAGGCTCAGTTGTCT...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTGCCTGGGCTACACAGTaGGACTCTGTTTTGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQAAWATQ*DSVLFL Trigger: CAAAAACAAAACAGAGTCTCACTGTGTAGCCCAGGC...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTAGACAACTGAGCCTGTaGAAGGAGCACAGATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TTPSLCGTGHGTQASYARRQLSL*KEHRSA Trigger: GGCAGATCTGTGCTCCTTTCACAGGCTCAGTTGTCT...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCTGCTAAAGCTACTTaGCCTACTGCCATTCTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQASAKAT*PTAILD Trigger: ATCCAGAATGGCAGTAGGTCAAGTAGCTTTAGCAGA...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTGAACACATATACACCTaGCACATTTCCCAACATGCC | + |
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Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQAEHIYT*HISQHA Trigger: GGCATGTTGGGAAATGTGCCAGGTGTATATGTGTTC...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTGTTACTCCTTGGATGTaGCAATATTGCAACATCACC | + |
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Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQAVTPWM*QYCNIT Trigger: GGTGATGTTGCAATATTGCCACATCCAAGGAGTAAC...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGATTGTTGCTGGGTGTaGTGGGAAACACCTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHDCCWV*WETPSI Trigger: GATTGAAGGTGTTTCCCACCACACCCAGCAACAATC...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCTGGCTGAGATCAAACTaGAAGCAGCATTTGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: WAIILSANLYPTCIRQLSWLRSN*KQHLGM Trigger: CATCCCCAAATGCTGCTTTCAGTTTGATCTCAGCCA...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTGCCTGGGCTACACAGTaGGACTCTGTTTTGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: TTPSLCGTGHGTQASYARAWATQ*DSVLFL Trigger: CAAAAACAAAACAGAGTCTCACTGTGTAGCCCAGGC...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTTAAGTTTCAGTGGCTaGAGTTTTGAACAAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQALSFSG*SFEQRV Trigger: CACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAA...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTACTGAAAGCAGCATTTaGGGATGTGCCTGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: TTPSLCGTGHGTQASYARTESSI*GCACVR Trigger: TCTCACACAGGCACATCCCCAAATGCTGCTTTCAGT...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTTCAGCATTAGAGGGCTaGGGTAGAAGGATTGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: TTPSLCGTGHGTQASYARSALEG*GRRIVK Trigger: CTTAACAATCCTTCTACCTCAGCCCTCTAATGCTGA...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTAACAAAATCCTCTCATaGTTCTTAGCACTTCCATCT | + |
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Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQANKILS*FLALPS Trigger: AGATGGAAGTGCTAAGAAGCATGAGAGGATTTTGTT...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTGCACATTTCCCAACATaGCTGAGAAATTCCTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: QACATTPSLCGTGHGTQAAHFPT*LRNSLK Trigger: TTTTAAGGAATTTCTCAGGCATGTTGGGAAATGTGC...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTTACTCCTTGGATGTaGCAATATTGCAACATCACC | + |
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Preference number: 2 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHVTPWM*QYCNIT Trigger: GGTGATGTTGCAATATTGCCACATCCAAGGAGTAAC...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACTTAAGTTTCAGTGGCTaGAGTTTTGAACAAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHLSFSG*SFEQRV Trigger: CACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAA...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATAGGCGATCATTCTCAGTaGGAACCTTTACCCAACCTG | + |
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Preference number: 2 (lower is better) Translates to: CLPILVEGKEAVWTNLRIGDHSQ*EPLPNL Trigger: CAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCC...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCTCAACAGTTACTCCTTaGATGTGGCAATATTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: WAIILSANLYPTCIRQLSSTVTP*MWQYCN Trigger: GTTGCAATATTGCCACATCCAAGGAGTAACTGTTGA...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATATGGCTGAGATCAAACTaGAAGCAGCATTTGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: CLPILVEGKEAVWTNLRIWLRSN*KQHLGM Trigger: CATCCCCAAATGCTGCTTTCAGTTTGATCTCAGCCA...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTTGTTTAAAAGTGCAATaGCTTAAGTTTCAGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TTPSLCGTGHGTQASYARCLKVQ*LKFQWL Trigger: CAGCCACTGAAACTTAAGTCATTGCACTTTTAAACA...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCAATGCTTTTACCACCTaGATAAGAAACATGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: WAIILSANLYPTCIRQLSNAFTT*IRNMTW Trigger: CCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATT...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACAGAAATGGGTGGGGGTaGGCAGGGAAACAGAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYRNGWG*AGKQRL Trigger: TAGCCTCTGTTTCCCTGCCCACCCCCACCCATTTCT...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR CAA 90 bp | TCAAAGGAAAATGACAATGCTAACTACCAACAGAGACATTTCTGTTaGAGGCAGCATCTCAGGTATCTCAGGCTTGCCTCCAACTCACTA | + |
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Preference number: 2 (lower is better) Translates to: SKENDNANYQQRHFC*RQHLRYLRLASNSL Trigger: TAGTGAGTTGGAGGCAAGCCTGAGATACCTGAGATGCTGCCTCAAACAGAAATGTCTCTGTTGGTAGTTAGCATTGTCATTTTCCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATATCAACAGTTACTCCTTaGATGTGGCAATATTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: CLPILVEGKEAVWTNLRISTVTP*MWQYCN Trigger: GTTGCAATATTGCCACATCCAAGGAGTAACTGTTGA...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACGATTGTTGCTGGGTGTaGTGGGAAACACCTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYDCCWV*WETPSI Trigger: GATTGAAGGTGTTTCCCACCACACCCAGCAACAATC...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACTCTGCTAAAGCTACTTaGCCTACTGCCATTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYSAKAT*PTAILD Trigger: ATCCAGAATGGCAGTAGGTCAAGTAGCTTTAGCAGA...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATAAATGCTTTTACCACCTaGATAAGAAACATGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: CLPILVEGKEAVWTNLRINAFTT*IRNMTW Trigger: CCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATT...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACGAACACATATACACCTaGCACATTTCCCAACATGCC | + |
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Preference number: 2 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYEHIYT*HISQHA Trigger: GGCATGTTGGGAAATGTGCCAGGTGTATATGTGTTC...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTAATGCTTTTACCACCTaGATAAGAAACATGACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SVDLMETMRNLIGHMRATNAFTT*IRNMTW Trigger: CCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATT...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR CCA 72 bp | ACAGGCATGTGCCACCACACCCAGTTTATGTGGTACTaGGCATGGAACCCAGGCTTCATATGCACGTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGMCHHTQFMWY*AWNPGFICTLG Trigger: GCCCAACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTCTGCCTTTGAGAGCATaGGCTCTTGAACTGATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TTPSLCGTGHGTQASYARLPLRA*ALELMA Trigger: AGCCATCAGTTCAAGAGCCAATGCTCTCAAAGGCAG...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACAGCACAGATCTGCCTTaGAGAGCATTGGCTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHSTDLP*RALALE Trigger: TTCAAGAGCCAATGCTCTCAAAGGCAGATCTGTGCT...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTGCTTTAGAGAATAGATaGTTGCTGGGTGTGGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TTPSLCGTGHGTQASYARALENR*LLGVVG Trigger: TCCCACCACACCCAGCAACAATCTATTCTCTAAAGC...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR TCA 72 bp | TCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTaGGCCTGTGAAAGGAGCACAGATCTGCCTTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVRTFTQPASDN*ACERSTDLPLR Trigger: TCTCAAAGGCAGATCTGTGCTCCTTTCACAGGCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTGATAAGAAACATGACTaGGTTAACTACACACACACT | + |
|
Preference number: 3 (lower is better) Translates to: QACATTPSLCGTGHGTQADKKHD*VNYTHT Trigger: AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATC...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTACAGAACAATGTAGTTaGGAAAAGCTGAGCATCGTG | + |
|
Preference number: 3 (lower is better) Translates to: TTPSLCGTGHGTQASYARTEQCS*EKLSIV Trigger: CACGATGCTCAGCTTTTCCAAACTACATTGTTCTGT...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR GCA 72 bp | TTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATaGACGTTGGGCAAAACAGTCAAACTACTGAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: FMWYWAWNPGFI*TLGKTVKLLSY Trigger: GTAGCTCAGTAGTTTGACTGTTTTGCCCAACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCGATAAGAAACATGACTaGGTTAACTACACACACACT | + |
|
Preference number: 3 (lower is better) Translates to: WAIILSANLYPTCIRQLSDKKHD*VNYTHT Trigger: AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATC...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR TCA 72 bp | ATGACAATGCTAACTACCAACAGAGACATTTCTGTTTaGGGCAGCATCTCAGGTATCTCAGGCTTGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: MTMLTTNRDISV*GSISGISGLPP Trigger: TGGAGGCAAGCCTGAGATACCTGAGATGCTGCCTCAAACAGAAATGTCTCTGTTGGTAGTTAGCATTGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR TCA 72 bp | GCTTCATATGCACGTTGGGCAAAACAGTCAAACTACTaGGCTACATCCCTACTCCTGAAGGCTTATTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ASYARWAKQSNY*ATSLLLKAYFL Trigger: GAGAAAATAAGCCTTCAGGAGTAGGGATGTAGCTCAGTAGTTTGACTGTTTTGCCCAACGTGCATATGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR CCA 72 bp | GAATATTGCTACCTGTCAACAGTTACTCCTTGGATGTaGCAATATTGCAACATCACCTGGTCTTCCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EYCYLSTVTPWM*QYCNITWSSPS Trigger: AGAAGGGGAAGACCAGGTGATGTTGCAATATTGCCACATCCAAGGAGTAACTGTTGACAGGTAGCAATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACAGCACAGATCTGCCTTaGAGAGCATTGGCTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYSTDLP*RALALE Trigger: TTCAAGAGCCAATGCTCTCAAAGGCAGATCTGTGCT...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR TCA 72 bp | GGAAACAGAGGCTATGATCCATCTGCTAAAGCTACTTaGCCTACTGCCATTCTGGATAAATTAATGGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GNRGYDPSAKAT*PTAILDKLMVF Trigger: GAAAACCATTAATTTATCCAGAATGGCAGTAGGTCAAGTAGCTTTAGCAGATGGATCATAGCCTCTGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR TCA 72 bp | GCTCAACAGATCCGCGTTGAGCTGAGTTACAGATTCTaGACCTTACTGAGAATACATCATAAACATTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AQQIRVELSYRF*TLLRIHHKHCV Trigger: AACACAATGTTTATGATGTATTCTCAGTAAGGTTCAGAATCTGTAACTCAGCTCAACGCGGATCTGTTGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR GCA 72 bp | AACAATAAATGCATATTATGTGATGTACTGTCAAAGTaGCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: NNKCILCDVLSK*LPILVEGKEAV Trigger: GACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCACTTTGACAGTACATCACATAATATGCATTTATTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR TCA 72 bp | CAAAACAGTCAAACTACTGAGCTACATCCCTACTCCTaGAGGCTTATTTTCTCATCTCAATTACTTAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QNSQTTELHPYS*RLIFSSQLLKC Trigger: GCACTTAAGTAATTGAGATGAGAAAATAAGCCTTCAGGAGTAGGGATGTAGCTCAGTAGTTTGACTGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTCCTGCTCATTGTCTTTaGTATGCGAGCCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QACATTPSLCGTGHGTQAPAHCL*YASLQG Trigger: TCCCTGAAGGCTCGCATATCAAAGACAATGAGCAGG...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCAGGCTGAGCAGCTCGTaGATTGGCATGTCGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSRLSSS*IGMSPS Trigger: GGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCT...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACCCTGCTCATTGTCTTTaGTATGCGAGCCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHPAHCL*YASLQG Trigger: TCCCTGAAGGCTCGCATATCAAAGACAATGAGCAGG...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR GCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTCGGACTGGCTGTTACTaGTATTTGAGGCAGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTPSLCGTGHGTQASYARRTGCY*YLRQWE Trigger: CTCCCACTGCCTCAAATAGCAGTAACAGCCAGTCCG...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACAACCAGCATGTCAGCTaGTGGATCAAACTCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHNQHVS*WIKLMV Trigger: GACCATGAGTTTGATCCATCAGCTGACATGCTGGTT...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCACTGGAATCTCAGCTTaGAACATGGAGCCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSTGISA*NMEPTM Trigger: CATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGT...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCCCTGCTCATTGTCTTTaGTATGCGAGCCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSPAHCL*YASLQG Trigger: TCCCTGAAGGCTCGCATATCAAAGACAATGAGCAGG...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACTGTGAGACTGCTTCCTaGAAAAACTCAGATGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHCETAS*KNSDEP Trigger: GGGCTCATCTGAGTTTTTCCAGGAAGCAGTCTCACA...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCAACCAGCATGTCAGCTaGTGGATCAAACTCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSNQHVS*WIKLMV Trigger: GACCATGAGTTTGATCCATCAGCTGACATGCTGGTT...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTAACCAGCATGTCAGCTaGTGGATCAAACTCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSLCGTGHGTQASYARNQHVS*WIKLMV Trigger: GACCATGAGTTTGATCCATCAGCTGACATGCTGGTT...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTTCTGATTCCTACTGCTaGCAGCGCCATCTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTPSLCGTGHGTQASYARSDSYC*QRHLLS Trigger: AGAAAGAAGATGGCGCTGTCAGCAGTAGGAATCAGA...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACCTCAAACTTCCCATGTaGGACTGCTTCCTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHLKLPM*DCFLEK Trigger: TTTTTCCAGGAAGCAGTCTCACATGGGAAGTTTGAG...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGATGGATCAAACTCATaGTCCTCTGATGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHDGSNS*SSDVAE Trigger: CTCAGCAACATCAGAGGACCATGAGTTTGATCCATC...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTTGTGAGACTGCTTCCTaGAAAAACTCAGATGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSLCGTGHGTQASYARCETAS*KNSDEP Trigger: GGGCTCATCTGAGTTTTTCCAGGAAGCAGTCTCACA...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR CAA 72 bp | TGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTaGGGCAAAACAGTCAAACTACTGAGCTACATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WYWAWNPGFICT*GKTVKLLSYIP Trigger: AGGGATGTAGCTCAGTAGTTTGACTGTTTTGCCCAACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGGATCCCACAGAAGCTaGTCATCATTTTCATACACT | + |
|
Preference number: 4 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHGSHRS*SSFSYT Trigger: AGTGTATGAAAATGATGATCAGCTTCTGTGGGATCC...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTAGTGGTCAGGTTATTTaGTTCATAACCATTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QACATTPSLCGTGHGTQASGQVI*FITISV Trigger: GACACTAATGGTTATGAAGCAAATAACCTGACCACT...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCGATGGATCAAACTCATaGTCCTCTGATGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSDGSNS*SSDVAE Trigger: CTCAGCAACATCAGAGGACCATGAGTTTGATCCATC...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACATATTTACATCGACGTaGGCGGATTATTTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHIFTST*ADYFLS Trigger: GCTCAGGAAATAATCCGCCCACGTCGATGTAAATAT...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCTACAAACACCAACTaGAATCTCAGCTTGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QACATTPSLCGTGHGTQASTNTN*NLSLKH Trigger: ATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGA...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTATATTTACATCGACGTaGGCGGATTATTTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSLCGTGHGTQASYARIFTST*ADYFLS Trigger: GCTCAGGAAATAATCCGCCCACGTCGATGTAAATAT...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCATATTTACATCGACGTaGGCGGATTATTTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSIFTST*ADYFLS Trigger: GCTCAGGAAATAATCCGCCCACGTCGATGTAAATAT...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCCAAGTTTTGGGTCAGTaGTCAGGTTATTTGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSQVLGQ*SGYLLH Trigger: ATGAAGCAAATAACCTGACCACTGACCCAAAACTTG...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTCAAGTTTTGGGTCAGTaGTCAGGTTATTTGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTPSLCGTGHGTQASYARQVLGQ*SGYLLH Trigger: ATGAAGCAAATAACCTGACCACTGACCCAAAACTTG...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR CAA 72 bp | GCCTGTGAAAGGAGCACAGATCTGCCTTTGAGAGCATaGGCTCTTGAACTGATGGCTGAGATCAAACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ACERSTDLPLRA*ALELMAEIKLK Trigger: TTTCAGTTTGATCTCAGCCATCAGTTCAAGAGCCAATGCTCTCAAAGGCAGATCTGTGCTCCTTTCACAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTCTTTTTCCAGTCTTCTaGGGGAATATAATCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSLCGTGHGTQASYARLFPVF*GNIIFI Trigger: GATGAAGATTATATTCCCTCAGAAGACTGGAAAAAG...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCCTTTTTCCAGTCTTCTaGGGGAATATAATCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSLFPVF*GNIIFI Trigger: GATGAAGATTATATTCCCTCAGAAGACTGGAAAAAG...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCAGTGGTCAGGTTATTTaGTTCATAACCATTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSSGQVI*FITISV Trigger: GACACTAATGGTTATGAAGCAAATAACCTGACCACT...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACCATATCTGTAAGAAGTaGTTTCTTATTTCCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHHICKK*FLISTC Trigger: ACAGGTGGAAATAAGAAACCACTTCTTACAGATATG...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| 3UTR CAA 72 bp | AATGACAATGCTAACTACCAACAGAGACATTTCTGTTaGAGGCAGCATCTCAGGTATCTCAGGCTTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDNANYQQRHFC*RQHLRYLRLAS Trigger: GGAGGCAAGCCTGAGATACCTGAGATGCTGCCTCAAACAGAAATGTCTCTGTTGGTAGTTAGCATTGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCCATATCTGTAAGAAGTaGTTTCTTATTTCCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WAIILSANLYPTCIRQLSHICKK*FLISTC Trigger: ACAGGTGGAAATAAGAAACCACTTCTTACAGATATG...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTACTGGAATCTCAGCTTaGAACATGGAGCCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVDLMETMRNLIGHMRATTGISA*NMEPTM Trigger: CATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGT...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATATCTTCTTTCTCGGACTaGCTGTTACTGCTATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLPILVEGKEAVWTNLRISSFSD*LLLLFE Trigger: CTCAAATAGCAGTAACAGCCAGTCCGAGAAAGAAGA...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACGGGCGGATTATTTCCTaGGCATCTTGGGAAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYGRIIS*ASWEVT Trigger: TGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCC...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | GAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACACACTGGGCGGATTATTTCCTaGGCATCTTGGGAAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: ECFYHLDKKHDLVNYTHTGRIIS*ASWEVT Trigger: TGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCC...AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACTCTGATTCCTACTGCTaGCAGCGCCATCTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYSDSYC*QRHLLS Trigger: AGAAAGAAGATGGCGCTGTCAGCAGTAGGAATCAGA...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | GAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACACACTTCTGATTCCTACTGCTaGCAGCGCCATCTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ECFYHLDKKHDLVNYTHTSDSYC*QRHLLS Trigger: AGAAAGAAGATGGCGCTGTCAGCAGTAGGAATCAGA...AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTTCTGATTCCTACTGCTaGCAGCGCCATCTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVDLMETMRNLIGHMRATSDSYC*QRHLLS Trigger: AGAAAGAAGATGGCGCTGTCAGCAGTAGGAATCAGA...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATACAAGTTTTGGGTCAGTaGTCAGGTTATTTGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLPILVEGKEAVWTNLRIQVLGQ*SGYLLH Trigger: ATGAAGCAAATAACCTGACCACTGACCCAAAACTTG...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTTTCCTTAGTAACGATGTTCAATTTGTATGGAGAGAAAAATGTCTGTTGTCCTGCTCATTGTCTTTaGTATGCGAGCCTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVTMFNLYGEKNVCCPAHCL*YASLQG Trigger: TCCCTGAAGGCTCGCATATCAAAGACAATGAGCAGG...ACAACAGACATTTTTCTCTCCATACAAATTGAACATCGTTACTAAGGAAACCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTCTCAAACTTCCCATGTaGGACTGCTTCCTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVDLMETMRNLIGHMRATLKLPM*DCFLEK Trigger: TTTTTCCAGGAAGCAGTCTCACATGGGAAGTTTGAG...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATAAGTGGTCAGGTTATTTaGTTCATAACCATTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPILVEGKEAVWTNLRISGQVI*FITISV Trigger: GACACTAATGGTTATGAAGCAAATAACCTGACCACT...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACGATGGATCAAACTCATaGTCCTCTGATGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYDGSNS*SSDVAE Trigger: CTCAGCAACATCAGAGGACCATGAGTTTGATCCATC...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACAAACCAGCATGTCAGCTaGTGGATCAAACTCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTNQHVS*WIKLMV Trigger: GACCATGAGTTTGATCCATCAGCTGACATGCTGGTT...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACATCCTCCTGACCCGATaGATCCTTTATATTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYILLTR*ILYILF Trigger: GAAGAGAATATAAAGGATTCATCGGGTCAGGAGGAT...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTTTCCTTAGTAACGATGTTCAATTTGTATGGAGAGAAAAATGTCTGTTGTGGGCGGATTATTTCCTaGGCATCTTGGGAAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVTMFNLYGEKNVCCGRIIS*ASWEVT Trigger: TGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCC...ACAACAGACATTTTTCTCTCCATACAAATTGAACATCGTTACTAAGGAAACCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACAGGGCGGATTATTTCCTaGGCATCTTGGGAAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTGRIIS*ASWEVT Trigger: TGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCC...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | GAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACACACTGGATCCCACAGAAGCTaGTCATCATTTTCATACACT | + |
|
Preference number: 4 (lower is better) Translates to: ECFYHLDKKHDLVNYTHTGSHRS*SSFSYT Trigger: AGTGTATGAAAATGATGATCAGCTTCTGTGGGATCC...AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACGGATCCCACAGAAGCTaGTCATCATTTTCATACACT | + |
|
Preference number: 4 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYGSHRS*SSFSYT Trigger: AGTGTATGAAAATGATGATCAGCTTCTGTGGGATCC...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATAAACTCATATAAAGCCTaGTCATTGTCTTTGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPILVEGKEAVWTNLRINSYKA*SLSLIC Trigger: GCATATCAAAGACAATGAGCAGGCTTTATATGAGTT...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | GAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACACACTCATATGGGCAAGTTTTaGGTCAGTGGTCAGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ECFYHLDKKHDLVNYTHTHMGKF*VSGQVI Trigger: AATAACCTGACCACTGACCCAAAACTTGCCCATATG...AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACCATATGGGCAAGTTTTaGGTCAGTGGTCAGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYHMGKF*VSGQVI Trigger: AATAACCTGACCACTGACCCAAAACTTGCCCATATG...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTCATATGGGCAAGTTTTaGGTCAGTGGTCAGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: SVDLMETMRNLIGHMRATHMGKF*VSGQVI Trigger: AATAACCTGACCACTGACCCAAAACTTGCCCATATG...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | GAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACACACTTTTCTTGCAGTCATATaGGCAAGTTTTGGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ECFYHLDKKHDLVNYTHTFLAVI*ASFGSV Trigger: CACTGACCCAAAACTTGCCCATATGACTGCAAGAAA...AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTTTTCTTGCAGTCATATaGGCAAGTTTTGGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVDLMETMRNLIGHMRATFLAVI*ASFGSV Trigger: CACTGACCCAAAACTTGCCCATATGACTGCAAGAAA...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACATGTGAGACTGCTTCCTaGAAAAACTCAGATGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTCETAS*KNSDEP Trigger: GGGCTCATCTGAGTTTTTCCAGGAAGCAGTCTCACA...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACAGATGGATCAAACTCATaGTCCTCTGATGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTDGSNS*SSDVAE Trigger: CTCAGCAACATCAGAGGACCATGAGTTTGATCCATC...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACTACACATTCACCAACTaGTCTTGTTCGGACTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYYTFTN*SCSDFI Trigger: AATAAAGTCCGAACAAGATCAGTTGGTGAATGTGTA...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTTACACATTCACCAACTaGTCTTGTTCGGACTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: SVDLMETMRNLIGHMRATYTFTN*SCSDFI Trigger: AATAAAGTCCGAACAAGATCAGTTGGTGAATGTGTA...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR TCA 90 bp | GAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACACACTTACACATTCACCAACTaGTCTTGTTCGGACTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ECFYHLDKKHDLVNYTHTYTFTN*SCSDFI Trigger: AATAAAGTCCGAACAAGATCAGTTGGTGAATGTGTA...AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACAATATTTACATCGACGTaGGCGGATTATTTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTIFTST*ADYFLS Trigger: GCTCAGGAAATAATCCGCCCACGTCGATGTAAATAT...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTTCTACAAACACCAACTaGAATCTCAGCTTGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SVDLMETMRNLIGHMRATSTNTN*NLSLKH Trigger: ATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGA...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACTCTACAAACACCAACTaGAATCTCAGCTTGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYSTNTN*NLSLKH Trigger: ATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGA...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACATCTTCTTTCTCGGACTaGCTGTTACTGCTATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTSSFSD*LLLLFE Trigger: CTCAAATAGCAGTAACAGCCAGTCCGAGAAAGAAGA...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACATATGGGCAAGTTTTaGGTCAGTGGTCAGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTHMGKF*VSGQVI Trigger: AATAACCTGACCACTGACCCAAAACTTGCCCATATG...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CCA 90 bp | AGGGTTTCCTTAGTAACGATGTTCAATTTGTATGGAGAGAAAAATGTCTGTTGTTTTCTTGCAGTCATATaGGCAAGTTTTGGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVTMFNLYGEKNVCCFLAVI*ASFGSV Trigger: CACTGACCCAAAACTTGCCCATATGACTGCAAGAAA...ACAACAGACATTTTTCTCTCCATACAAATTGAACATCGTTACTAAGGAAACCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR GCA 90 bp | GAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACACACTAACTCATATAAAGCCTaGTCATTGTCTTTGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: ECFYHLDKKHDLVNYTHTNSYKA*SLSLIC Trigger: GCATATCAAAGACAATGAGCAGGCTTTATATGAGTT...AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR GCA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTAACTCATATAAAGCCTaGTCATTGTCTTTGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: SVDLMETMRNLIGHMRATNSYKA*SLSLIC Trigger: GCATATCAAAGACAATGAGCAGGCTTTATATGAGTT...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR TCA 90 bp | AGGGTTTCCTTAGTAACGATGTTCAATTTGTATGGAGAGAAAAATGTCTGTTGTCTTTTTCCAGTCTTCTaGGGGAATATAATCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVTMFNLYGEKNVCCLFPVF*GNIIFI Trigger: GATGAAGATTATATTCCCTCAGAAGACTGGAAAAAG...ACAACAGACATTTTTCTCTCCATACAAATTGAACATCGTTACTAAGGAAACCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR TCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACATACACATTCACCAACTaGTCTTGTTCGGACTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTYTFTN*SCSDFI Trigger: AATAAAGTCCGAACAAGATCAGTTGGTGAATGTGTA...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR TCA 90 bp | AGGGTTTCCTTAGTAACGATGTTCAATTTGTATGGAGAGAAAAATGTCTGTTGTATTAGCAATCAACAATaGAGTGTTTTCACAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVTMFNLYGEKNVCCISNQQ*SVFTEQ Trigger: CTGCTCTGTGAAAACACTTCATTGTTGATTGCTAAT...ACAACAGACATTTTTCTCTCCATACAAATTGAACATCGTTACTAAGGAAACCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097945.10 |
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| CDS-3UTR CCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACATCTACAAACACCAACTaGAATCTCAGCTTGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTSTNTN*NLSLKH Trigger: ATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGA...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR GCA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACAAACTCATATAAAGCCTaGTCATTGTCTTTGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: LYECFYHLDKKHDLVNYTNSYKA*SLSLIC Trigger: GCATATCAAAGACAATGAGCAGGCTTTATATGAGTT...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTCCTTAGTAACGATGTTCAATTTGTATGGAGAGAAAAATGTCTGTTGTCATATCTGTAAGAAGTaGTTTCTTATTTCCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSLVTMFNLYGEKNVCCHICKK*FLISTC Trigger: ACAGGTGGAAATAAGAAACCACTTCTTACAGATATG...ACAACAGACATTTTTCTCTCCATACAAATTGAACATCGTTACTAAGGAAACCCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTGCGAGCCTTCAGGGATaGCTTCCACACCTTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QACATTPSLCGTGHGTQAASLQG*LPHLSH Trigger: ATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGC...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS TCA 90 bp | CCTCTTCCTCAGGTAACCGAACAGTGCTGTCATAACCATAGAGGCTaGGCAGCTCGTGGATTGGCATGTCGCCTTCCCTCGCAAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLPQVTEQCCHNHRG*AARGLACRLPSQDP Trigger: AGGATCTTGCGAGGGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCTCTATGGTTATGACAGCACTGTTCGGTTACCTGAGGAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTCATGGTCCTCTGATGTaGCTGAGCCTCCTGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTPSLCGTGHGTQASYARHGPLM*LSLLDL Trigger: CAAGTCCAGGAGGCTCAGCAACATCAGAGGACCATG...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030247.11 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTAACTGGAATCTCAGCTaGAAACATGGAGCCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: QACATTPSLCGTGHGTQANWNLS*KHGAHH Trigger: ATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTT...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTGCGAGCCTTCAGGGATaGCTTCCACACCTTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TTPSLCGTGHGTQASYARASLQG*LPHLSH Trigger: ATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGC...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCATGTGCCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTATAGGCCTTCAGCCCTaGCTCAAAATTTCTACACTC | + |
|
Preference number: 5 (lower is better) Translates to: QACATTPSLCGTGHGTQAIGLQP*LKISTL Trigger: GAGTGTAGAAATTTTGAGCAAGGGCTGAAGGCCTAT...AGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGGCACATGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | CCACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACAACTGGAATCTCAGCTaGAAACATGGAGCCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPHPVYVVLGMEPRLHMHNWNLS*KHGAHH Trigger: ATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTT...GTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | ACCACACCCAGTTTATGTGGTACTGGGCATGGAACCCAGGCTTCATATGCACGTAACTGGAATCTCAGCTaGAAACATGGAGCCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: TTPSLCGTGHGTQASYARNWNLS*KHGAHH Trigger: ATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTT...ACGTGCATATGAAGCCTGGGTTCCATGCCCAGTACCACATAAACTGGGTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATACATGGTCCTCTGATGTaGCTGAGCCTCCTGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLPILVEGKEAVWTNLRIHGPLM*LSLLDL Trigger: CAAGTCCAGGAGGCTCAGCAACATCAGAGGACCATG...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030247.11 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCATAGGCCTTCAGCCCTaGCTCAAAATTTCTACACTC | + |
|
Preference number: 5 (lower is better) Translates to: WAIILSANLYPTCIRQLSIGLQP*LKISTL Trigger: GAGTGTAGAAATTTTGAGCAAGGGCTGAAGGCCTAT...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TGGGCGATCATTCTCAGTGCGAACCTTTACCCAACCTGCATCAGACAACTGAGCTCATATGGGCAAGTTTaGGGTCAGTGGTCAGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WAIILSANLYPTCIRQLSSYGQV*GQWSGY Trigger: ATAACCTGACCACTGACCCAAAACTTGCCCATATGA...GCTCAGTTGTCTGATGCAGGTTGGGTAAAGGTTCGCACTGAGAATGATCGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATAGCGAGCCTTCAGGGATaGCTTCCACACCTTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPILVEGKEAVWTNLRIASLQG*LPHLSH Trigger: ATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGC...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS CCA 90 bp | TTCGTGTTTTCATGTTCCTCAAACTTCCCATGTGAGACTGCTTCCTaGAAAAACTCAGATGAGCCCGGACTTTCTTTCCCACTGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FVFSCSSNFPCETAS*KNSDEPGLSFPLLF Trigger: AAACAGCAGTGGGAAAGAAAGTCCGGGCTCATCTGAGTTTTTCCAGGAAGCAGTCTCACATGGGAAGTTTGAGGAACATGAAAACACGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATAAACTGGAATCTCAGCTaGAAACATGGAGCCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPILVEGKEAVWTNLRINWNLS*KHGAHH Trigger: ATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTT...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATATCATATGGGCAAGTTTaGGGTCAGTGGTCAGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPILVEGKEAVWTNLRISYGQV*GQWSGY Trigger: ATAACCTGACCACTGACCCAAAACTTGCCCATATGA...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTCCAATACTGGTCGAGGGAAAGGAAGCAGTCTGGACAAATCTAAGAATAATATTCACCCTGGACTaGAAGACTCAACAGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLPILVEGKEAVWTNLRIIFTLD*KTQQMA Trigger: AGCCATCTGTTGAGTCTTCAAGTCCAGGGTGAATAT...TATTCTTAGATTTGTCCAGACTGCTTCCTTTCCCTCGACCAGTATTGGAAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097945.10 |
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| CDS-3UTR CAA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACAGCGAGCCTTCAGGGATaGCTTCCACACCTTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LYECFYHLDKKHDLVNYTASLQG*LPHLSH Trigger: ATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGC...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTATAGGCCTTCAGCCCTaGCTCAAAATTTCTACACTC | + |
|
Preference number: 5 (lower is better) Translates to: SVDLMETMRNLIGHMRATIGLQP*LKISTL Trigger: GAGTGTAGAAATTTTGAGCAAGGGCTGAAGGCCTAT...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | GAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACACACTTCATATGGGCAAGTTTaGGGTCAGTGGTCAGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: ECFYHLDKKHDLVNYTHTSYGQV*GQWSGY Trigger: ATAACCTGACCACTGACCCAAAACTTGCCCATATGA...AGTGTGTGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS TCA 90 bp | CTATTTGTATCAAAATATTTACATCGACGTGGGCGGATTATTTCCTaGGCATCTTGGGAAGTAACAGACTGTGAGGGATCATCATTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFVSKYLHRRGRIIS*ASWEVTDCEGSSLE Trigger: TTCCAATGATGATCCCTCACAGTCTGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCCACGTCGATGTAAATATTTTGATACAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS GCA 90 bp | TCTTGCAGTCATATGGGCAAGTTTTGGGTCAGTGGTCAGGTTATTTaGTTCATAACCATTAGTGTCCATATCTGTAAGAAGTGGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSHMGKFWVSGQVI*FITISVHICKKWFL Trigger: AAGAAACCACTTCTTACAGATATGGACACTAATGGTTATGAAGCAAATAACCTGACCACTGACCCAAAACTTGCCCATATGACTGCAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | AAGTGCAATGACTTAAGTTTCAGTGGCTGCAGTTTTGAACAAAGGGTGAAATACTCCTCTCGAGCTGCTTaGACATTAAATCTCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KCNDLSFSGCSFEQRVKYSSRAA*TLNLSL Trigger: AAGACTGAGATTTAATGTCAAAGCAGCTCGAGAGGA...GTATTTCACCCTTTGTTCAAAACTGCAGCCACTGAAACTTAAGTCATTGCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS-3UTR CAA 90 bp | TCTGTTGACTTAATGGAAACGATGAGAAATCTTATAGGGCACATGAGAGCAACTCAGATGGCTTGTAATTaGACAGGAAAAGAATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVDLMETMRNLIGHMRATQMACN*TGKESR Trigger: TCTGGATTCTTTTCCTGTCAAATTACAAGCCATCTG...AGTTGCTCTCATGTGCCCTATAAGATTTCTCATCGTTTCCATTAAGTCAACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106858.8 |
||
| CDS-3UTR CAA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACAATAGGCCTTCAGCCCTaGCTCAAAATTTCTACACTC | + |
|
Preference number: 5 (lower is better) Translates to: LYECFYHLDKKHDLVNYTIGLQP*LKISTL Trigger: GAGTGTAGAAATTTTGAGCAAGGGCTGAAGGCCTAT...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTTTCCTTAGTAACGATGTTCAATTTGTATGGAGAGAAAAATGTCTGTTGTTCCTCTCGAGCTGCTTaGACATTAAATCTCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RVSLVTMFNLYGEKNVCCSSRAA*TLNLSL Trigger: AAGACTGAGATTTAATGTCAAAGCAGCTCGAGAGGA...ACAACAGACATTTTTCTCTCCATACAAATTGAACATCGTTACTAAGGAAACCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
||
| CDS-3UTR CAA 90 bp | CTTTATGAATGCTTTTACCACCTGGATAAGAAACATGACTTGGTTAACTACACACAGATGGCTTGTAATTaGACAGGAAAAGAATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYECFYHLDKKHDLVNYTQMACN*TGKESR Trigger: TCTGGATTCTTTTCCTGTCAAATTACAAGCCATCTG...TGTGTAGTTAACCAAGTCATGTTTCTTATCCAGGTGGTAAAAGCATTCATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106858.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTTTCCTTAGTAACGATGTTCAATTTGTATGGAGAGAAAAATGTCTGTTGTCAGATGGCTTGTAATTaGACAGGAAAAGAATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVSLVTMFNLYGEKNVCCQMACN*TGKESR Trigger: TCTGGATTCTTTTCCTGTCAAATTACAAGCCATCTG...ACAACAGACATTTTTCTCTCCATACAAATTGAACATCGTTACTAAGGAAACCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106858.8 |
||
| CDS TCA 72 bp | CAGGTAACCGAACAGTGCTGTCATAACCATAGAGGCTaGGCAGCTCGTGGATTGGCATGTCGCCTTCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QVTEQCCHNHRG*AARGLACRLPS Trigger: CGAGGGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCTCTATGGTTATGACAGCACTGTTCGGTTACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS CCA 72 bp | GCTGTCATAACCATAGAGGCTGAGCAGCTCGTGGATTaGCATGTCGCCTTCCCTCGCAAGATCCTCTATTTC | + |
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Preference number: 6 (lower is better) Translates to: AVITIEAEQLVD*HVAFPRKILYF Trigger: GAAATAGAGGATCTTGCGAGGGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCTCTATGGTTATGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS GCA 72 bp | GGAAAAACTCAGATGAGCCCGGACTTTCTTTCCCACTaGTGTTTATCCGCCGCCTTTTGGCAGGTCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GKTQMSPDFLSH*CLSAAFWQVSH Trigger: ATGAGAGACCTGCCAAAAGGCGGCGGATAAACAGCAGTGGGAAAGAAAGTCCGGGCTCATCTGAGTTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS CAA 72 bp | TGTCAGCTGATGGATCAAACTCATGGTCCTCTGATGTaGCTGAGCCTCCTGGACTTGAAGACTCAACAGATG | + |
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Preference number: 6 (lower is better) Translates to: CQLMDQTHGPLM*LSLLDLKTQQM Trigger: CATCTGTTGAGTCTTCAAGTCCAGGAGGCTCAGCAACATCAGAGGACCATGAGTTTGATCCATCAGCTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030247.11 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS TCA 72 bp | AGTATTTCTCCTGGTCCATTAGATGAGACACCGTTCTaGTTCCTACTGCTGACAGCGCCATCTTCTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SISPGPLDETPF*FLLLTAPSSFS Trigger: CGAGAAAGAAGATGGCGCTGTCAGCAGTAGGAATCAGAACGGTGTCTCATCTAATGGACCAGGAGAAATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS CCA 72 bp | TCATGTTCCTCAAACTTCCCATGTGAGACTGCTTCCTaGAAAAACTCAGATGAGCCCGGACTTTCTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SCSSNFPCETAS*KNSDEPGLSFP Trigger: TGGGAAAGAAAGTCCGGGCTCATCTGAGTTTTTCCAGGAAGCAGTCTCACATGGGAAGTTTGAGGAACATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS CAA 90 bp | TCAAAGCTGCATTTAACCAACTCATATAAAGCCTGCTCATTGTCTTaGATATGCGAGCCTTCAGGGATTGCTTCCACACCTTTCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: SKLHLTNSYKACSLS*ICEPSGIASTPFSS Trigger: GGATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGCATATCAAAGACAATGAGCAGGCTTTATATGAGTTGGTTAAATGCAGCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS CAA 90 bp | TCCGTATCAAAGCTGCATTTAACCAACTCATATAAAGCCTGCTCATaGTCTTTGATATGCGAGCCTTCAGGGATTGCTTCCACACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVSKLHLTNSYKACS*SLICEPSGIASTPF Trigger: GAAAGGTGTGGAAGCAATCCCTGAAGGCTCGCATATCAAAGACAATGAGCAGGCTTTATATGAGTTGGTTAAATGCAGCTTTGATACGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS TCA 72 bp | TCAAAATATTTACATCGACGTGGGCGGATTATTTCCTaGGCATCTTGGGAAGTAACAGACTGTGAGGGATCA | + |
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Preference number: 6 (lower is better) Translates to: SKYLHRRGRIIS*ASWEVTDCEGS Trigger: TGATCCCTCACAGTCTGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCCACGTCGATGTAAATATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS CAA 72 bp | CATTTAACCAACTCATATAAAGCCTGCTCATTGTCTTaGATATGCGAGCCTTCAGGGATTGCTTCCACACCT | + |
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Preference number: 6 (lower is better) Translates to: HLTNSYKACSLS*ICEPSGIASTP Trigger: AGGTGTGGAAGCAATCCCTGAAGGCTCGCATATCAAAGACAATGAGCAGGCTTTATATGAGTTGGTTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS CAA 72 bp | AAGCTGCATTTAACCAACTCATATAAAGCCTGCTCATaGTCTTTGATATGCGAGCCTTCAGGGATTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KLHLTNSYKACS*SLICEPSGIAS Trigger: GGAAGCAATCCCTGAAGGCTCGCATATCAAAGACAATGAGCAGGCTTTATATGAGTTGGTTAAATGCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS TCA 72 bp | TCTTTGTATCTACAAACACCAACTGGAATCTCAGCTTaGAACATGGAGCCCACCATGATTTCCTTTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLYLQTPTGISA*NMEPTMISFFQ Trigger: CTGGAAAAAGGAAATCATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGATACAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS TCA 72 bp | TCTTCTTCTTCTAATGTTCGCTCATCATCAAAATCATaGACCAGCATGTCAGCTGATGGATCAAACTCATGG | + |
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Preference number: 6 (lower is better) Translates to: SSSSNVRSSSKS*TSMSADGSNSW Trigger: CCATGAGTTTGATCCATCAGCTGACATGCTGGTTCATGATTTTGATGATGAGCGAACATTAGAAGAAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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| CDS GCA 72 bp | CATATGGGCAAGTTTTGGGTCAGTGGTCAGGTTATTTaGTTCATAACCATTAGTGTCCATATCTGTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: HMGKFWVSGQVI*FITISVHICKK Trigger: CTTCTTACAGATATGGACACTAATGGTTATGAAGCAAATAACCTGACCACTGACCCAAAACTTGCCCATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030247.11 ENSMUST00000097945.10 ENSMUST00000106855.2 ENSMUST00000106857.8 ENSMUST00000106858.8 |
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