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Pregenerated sensors for MIEN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002580

Ensembl transcript IDs: ENSMUST00000002655.8

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp AAACTGCAGAGGGCACAGATCCCGGGAGAGCGATGGTaGTGTTCACAGAGAACATCTCTTTTCTGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: KLQRAQIPGERW*CSQRTSLFCLW
Trigger: CCAAAGGCAGAAAAGAGATGTTCTCTGTGAACATCACCATCGCTCTCCCGGGATCTGTGCCCTCTGCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
3UTR GCA 72 bp CTGCCTTTGGCCACAGAAATGTCTAGTCCCTCCTTGTaGCCTAAGAGGCAAAGTGAAGTCAGGGTCTTAGTT +
Preference number: 3 (lower is better)
Translates to: LPLATEMSSPSL*PKRQSEVRVLV
Trigger: AACTAAGACCCTGACTTCACTTTGCCTCTTAGGGCACAAGGAGGGACTAGACATTTCTGTGGCCAAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
3UTR TCA 72 bp GATTCAGGGAAAATAAGTTATAGCAACCGTGGCATCTaGAAGGTATTGCCACGCTGGGGAGAGGACCAAACT +
Preference number: 3 (lower is better)
Translates to: DSGKISYSNRGI*KVLPRWGEDQT
Trigger: AGTTTGGTCCTCTCCCCAGCGTGGCAATACCTTTCAGATGCCACGGTTGCTATAACTTATTTTCCCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR CCA 90 bp GGCACAGATCCCGGGAGAGCGATGGTGATGTTCACAGAGAACATCTCTTTTCTGCAGGTTCTCCATTGCTaGCTCTTCGGATGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GTDPGRAMVMFTENISFLQVLHC*LFGWLP
Trigger: TGGAAGCCATCCGAAGAGCCAGCAATGGAGAACCTG...CAGAAAAGAGATGTTCTCTGTGAACATCACCATCGCTCTCCCGGGATCTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR CCA 90 bp GGTAGAGGGATTCCTAGCGTAACCACAAGGAAAGGTTTAAACCCCAGAACCAAGTACTCCACCACGATGTaGACTCCACTGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GRGIPSVTTRKGLNPRTKYSTTM*TPLPAS
Trigger: GGAAGCAGGCAGTGGAGTCCACATCGTGGTGGAGTA...CTTGGTTCTGGGGTTTAAACCTTTCCTTGTGGTTACGCTAGGAATCCCTCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR CCA 90 bp ACAGATCCCGGGAGAGCGATGGTGATGTTCACAGAGAACATCTCTTTTCTGCCTCTCCATTCTCCAGCTTaGAGAACACCAGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: TDPGRAMVMFTENISFLPLHSPA*RTPAVH
Trigger: ATGGACAGCTGGTGTTCTCCAAGCTGGAGAATGGAG...AGGCAGAAAAGAGATGTTCTCTGTGAACATCACCATCGCTCTCCCGGGATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
3UTR CAA 72 bp TTTCTGCCTTTGGCCACAGAAATGTCTAGTCCCTCCTaGTGCCCTAAGAGGCAAAGTGAAGTCAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: FLPLATEMSSPS*CPKRQSEVRVL
Trigger: TAAGACCCTGACTTCACTTTGCCTCTTAGGGCACAAGGAGGGACTAGACATTTCTGTGGCCAAAGGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR GCA 90 bp CAGAGAACATCTCTTTTCTGCCTTTGGCCACAGAAATGTCTAGTCCCTCCTTGTCTACAGGTTCTCCATTaGTGGCTCTTCGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: QRTSLFCLWPQKCLVPPCLQVLH*WLFGWL
Trigger: AAGCCATCCGAAGAGCCAGCAATGGAGAACCTGTAG...ACAAGGAGGGACTAGACATTTCTGTGGCCAAAGGCAGAAAAGAGATGTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR TCA 90 bp AACCACAAGGAAAGGTTTAAACCCCAGAACCAAGCTTCCAAGAATCATTTCTTAGAGGCCGGCTGTTGGTaGTCTTTTCTACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: NHKERFKPQNQASKNHFLEAGCW*SFLQVL
Trigger: GAGAACCTGTAGAAAAGATCACCAACAGCCGGCCTC...TAAGAAATGATTCTTGGAAGCTTGGTTCTGGGGTTTAAACCTTTCCTTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS GCA 90 bp GCCGCAGGGTTTACAGTACTCCACCACGATGTGGACTCCACTGCCTaGTTCCACCTCCCCGGGAGGGGGCACTACGGACACCGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: AAGFTVLHHDVDSTA*FHLPGRGHYGHRRW
Trigger: CCAGCGCCGGTGTCCGTAGTGCCCCCTCCCGGGGAGGTGGAAGCAGGCAGTGGAGTCCACATCGTGGTGGAGTACTGTAAACCCTGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS GCA 90 bp CAAAGCCGCAGGGTTTACAGTACTCCACCACGATGTGGACTCCACTaGCTGCTTCCACCTCCCCGGGAGGGGGCACTACGGACACCGGCG +
Preference number: 5 (lower is better)
Translates to: QSRRVYSTPPRCGLH*LLPPPREGALRTPA
Trigger: CGCCGGTGTCCGTAGTGCCCCCTCCCGGGGAGGTGGAAGCAGGCAGTGGAGTCCACATCGTGGTGGAGTACTGTAAACCCTGCGGCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR CAA 90 bp CAGAGAACATCTCTTTTCTGCCTTTGGCCACAGAAATGTCTAGTCCCTCCTTGTCCTCCATTCTCCAGCTaGGAGAACACCAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: QRTSLFCLWPQKCLVPPCPPFSS*ENTSCP
Trigger: TGGACAGCTGGTGTTCTCCAAGCTGGAGAATGGAGG...ACAAGGAGGGACTAGACATTTCTGTGGCCAAAGGCAGAAAAGAGATGTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR CAA 90 bp GGTAGAGGGATTCCTAGCGTAACCACAAGGAAAGGTTTAAACCCCAGAACCAAGTCTACAGGTTCTCCATaGCTGGCTCTTCGGATGGCT +
Preference number: 5 (lower is better)
Translates to: GRGIPSVTTRKGLNPRTKSTGSP*LALRMA
Trigger: AGCCATCCGAAGAGCCAGCAATGGAGAACCTGTAGA...CTTGGTTCTGGGGTTTAAACCTTTCCTTGTGGTTACGCTAGGAATCCCTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR CAA 90 bp CAGAGAACATCTCTTTTCTGCCTTTGGCCACAGAAATGTCTAGTCCCTCCTTGTCAGGGAGGCCGGCTGTaGGTGATCTTTTCTACAGGT +
Preference number: 5 (lower is better)
Translates to: QRTSLFCLWPQKCLVPPCQGGRL*VIFSTG
Trigger: ACCTGTAGAAAAGATCACCAACAGCCGGCCTCCCTG...ACAAGGAGGGACTAGACATTTCTGTGGCCAAAGGCAGAAAAGAGATGTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS-3UTR CAA 90 bp TCACAGAGAACATCTCTTTTCTGCCTTTGGCCACAGAAATGTCTAGTCCCTCCTAACACCAGCTGTCCATaGATCTCAATCTCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SQRTSLFCLWPQKCLVPPNTSCP*ISISKA
Trigger: GGCCTTCGAGATTGAGATCAATGGACAGCTGGTGTT...AGGAGGGACTAGACATTTCTGTGGCCAAAGGCAGAAAAGAGATGTTCTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS GCA 72 bp TTTACAGTACTCCACCACGATGTGGACTCCACTGCCTaGTTCCACCTCCCCGGGAGGGGGCACTACGGACAC +
Preference number: 6 (lower is better)
Translates to: FTVLHHDVDSTA*FHLPGRGHYGH
Trigger: GTGTCCGTAGTGCCCCCTCCCGGGGAGGTGGAAGCAGGCAGTGGAGTCCACATCGTGGTGGAGTACTGTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8
CDS CAA 72 bp GGCCGGCTGTTGGTGATCTTTTCTACAGGTTCTCCATaGCTGGCTCTTCGGATGGCTTCCATGAGGTCTTTC +
Preference number: 6 (lower is better)
Translates to: GRLLVIFSTGSP*LALRMASMRSF
Trigger: GAAAGACCTCATGGAAGCCATCCGAAGAGCCAGCAATGGAGAACCTGTAGAAAAGATCACCAACAGCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002655.8