Pregenerated sensors for MIEF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018599Ensembl transcript IDs: ENSMUST00000018743.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGGAAGCCACTGTCCTTCAGCAGCTAAGCAGCTGTCCTCCAGCTaGCCCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCAC | + |
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Preference number: 1 (lower is better) Translates to: SGSHCPSAAKQLSSS*PPRSASRRPGAVTH Trigger: GTGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAGCTGGAGGACAGCTGCTTAGCTGCTGAAGGACAGTGGCTTCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR GCA 90 bp | AGGGGAGACAGTCTCCCTCCTCCAGCCATGCCACCTGGACCAGGGTaGAAGGTGAGGACACACATCTATCATGAATATTTTGGCACGCTG | + |
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Preference number: 1 (lower is better) Translates to: RGDSLPPPAMPPGPG*KVRTHIYHEYFGTL Trigger: CAGCGTGCCAAAATATTCATGATAGATGTGTGTCCTCACCTTGCACCCTGGTCCAGGTGGCATGGCTGGAGGAGGGAGACTGTCTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR TCA 90 bp | ACAGTCTCCCTCCTCCAGCCATGCCACCTGGACCAGGGTGCAAGGTaGGGACACACATCTATCATGAATATTTTGGCACGCTGCAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: TVSLLQPCHLDQGAR*GHTSIMNILARCRG Trigger: TCCTCTGCAGCGTGCCAAAATATTCATGATAGATGTGTGTCCTCACCTTGCACCCTGGTCCAGGTGGCATGGCTGGAGGAGGGAGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR CCA 90 bp | GCCCATAGAGAAAACCAAGCAGAAGAGAACGAGACCTTCCTTCCCTaGGGTATAAGGCAGGGAGCCCTCGAGGGAGTCAACTTCAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: AHRENQAEENETFLP*GIRQGALEGVNFSF Trigger: GAAGCTGAAGTTGACTCCCTCGAGGGCTCCCTGCCTTATACCCCAGGGAAGGAAGGTCTCGTTCTCTTCTGCTTGGTTTTCTCTATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR TCA 90 bp | ATAAGGCAGGGAGCCCTCGAGGGAGTCAACTTCAGCTTCAAGGCCTaGGGACCCAATCAGAAAAACAAATGCACCACCATCAGGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: IRQGALEGVNFSFKA*GPNQKNKCTTIRKP Trigger: TGGCTTCCTGATGGTGGTGCATTTGTTTTTCTGATTGGGTCCTCAGGCCTTGAAGCTGAAGTTGACTCCCTCGAGGGCTCCCTGCCTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGAGGACAGGTCTGCACACAGGCCTCTGAGAGGAGCGTATCCTCTACCCCAGCTGTCCTCCAGCTaGCCCCCTCGGAGTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AAEDRSAHRPLRGAYPLPQLSSS*PPRSAS Trigger: GGAGGCACTCCGAGGGGGTCAGCTGGAGGACAGCTG...GGGTAGAGGATACGCTCCTCTCAGAGGCCTGTGTGCAGACCTGTCCTCTGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCCAGCTGACCCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCACATCACCCAGGCACATaGCCACGTGTGGGCTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: VLQLTPSECLQETWGCYPHHPGT*PRVGLG Trigger: ACCTAAGCCCACACGTGGGCATGTGCCTGGGTGATG...TGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAGCTGGAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCACCCAAGAACATTTTGTCCTAGGAGGGAGGTaGCTGCTGCTCTCCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: PLGVPPGDLGLLPTQEHFVLGGR*LLLSSI Trigger: GATGCTGGAGAGCAGCAGCCACCTCCCTCCTAGGAC...AAAATGTTCTTGGGTGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGAGGCCAGCCACACTCAGATGTCAGCAACCCAGAGTCTCTGGGTTTGAGACGTGTGGGCTTAGGTaGTGTCACTCCCCCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: QGRPATLRCQQPRVSGFETCGLR*CHSPST Trigger: AGTGGAGGGGGAGTGACATCACCTAAGCCCACACGT...CTCAAACCCAGAGACTCTGGGTTGCTGACATCTGAGTGTGGCTGGCCTCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGAGGCCAGCCACACTCAGATGTCAGCAACCCAGAGTCTCTGGGTTTGAGGAGGGAGGTGGCTGCTaGTCTCCAGCATCAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: QGRPATLRCQQPRVSGFEEGGGC*SPASEN Trigger: GTTTTCTGATGCTGGAGAGCAGCAGCCACCTCCCTC...CTCAAACCCAGAGACTCTGGGTTGCTGACATCTGAGTGTGGCTGGCCTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR GCA 90 bp | AATTCGTGGCCCATAGAGAAAACCAAGCAGAAGAGAACGAGACCTTCCTTCCCTCTGACCCCCTCGGAGTaGCTCCAGGAGACCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: NSWPIEKTKQKRTRPSFPLTPSE*LQETWG Trigger: GCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAG...AGGGAAGGAAGGTCTCGTTCTCTTCTGCTTGGTTTTCTCTATGGGCCACGAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR CCA 90 bp | CAAATGCACCACCATCAGGAAGCCACTGTCCTTCAGCAGCTAAGCAGCTGTCCTTGCCTCCAGGAGACCTaGGGCTGTTACCCACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: QMHHHQEATVLQQLSSCPCLQET*GCYPPK Trigger: CTTGGGTGGGTAACAGCCCCAGGTCTCCTGGAGGCA...AGGACAGCTGCTTAGCTGCTGAAGGACAGTGGCTTCCTGATGGTGGTGCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGAGGACAGGTCTGCACACAGGCCTCTGAGAGGAGCGTATCCTCTACCCTTCAGCTTCAAGGCCTaGGGACCCAATCAGAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: AAEDRSAHRPLRGAYPLPFSFKA*GPNQKN Trigger: GTTTTTCTGATTGGGTCCTCAGGCCTTGAAGCTGAA...GGGTAGAGGATACGCTCCTCTCAGAGGCCTGTGTGCAGACCTGTCCTCTGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTTCAAGGCCTGAGGACCCAATCAGAAAAACAAATGCACCACCATCAGGACAGTCTTGGCCTAGGTaGAGCCTAGGAAATCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SASRPEDPIRKTNAPPSGQSWPR*SLGNQK Trigger: CTTTTGATTTCCTAGGCTTCACCTAGGCCAAGACTG...TCCTGATGGTGGTGCATTTGTTTTTCTGATTGGGTCCTCAGGCCTTGAAGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTAGGAGCAGCCTCTATGGGATTGCCTTGCATAGACAGCACAGAGTTCAGAATCAGAAAAACAAATaGACCACCATCAGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RSRSSLYGIALHRQHRVQNQKNK*TTIRKP Trigger: TGGCTTCCTGATGGTGGTGCATTTGTTTTTCTGATT...CTGAACTCTGTGCTGTCTATGCAAGGCAATCCCATAGAGGCTGCTCCTAGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR TCA 72 bp | CACTGTCCTTCAGCAGCTAAGCAGCTGTCCTCCAGCTaGCCCCCTCGGAGTGCCTCCAGGAGACCTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: HCPSAAKQLSSS*PPRSASRRPGA Trigger: AGCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAGCTGGAGGACAGCTGCTTAGCTGCTGAAGGACAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR GCA 72 bp | GGGTTTGAGACTCTTGATCACCATCACCCAGGCACATaGCCACGTGTGGGCTTAGGTGATGTCACTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: GFETLDHHHPGT*PRVGLGDVTPP Trigger: AGGGGGAGTGACATCACCTAAGCCCACACGTGGGCATGTGCCTGGGTGATGGTGATCAAGAGTCTCAAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR TCA 72 bp | CCATCACCCAGGCACATGCCCACGTGTGGGCTTAGGTaGTGTCACTCCCCCTCCACTCTGGCTAAAATAAAG | + |
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Preference number: 3 (lower is better) Translates to: PSPRHMPTCGLR*CHSPSTLAKIK Trigger: CTTTATTTTAGCCAGAGTGGAGGGGGAGTGACATCACCTAAGCCCACACGTGGGCATGTGCCTGGGTGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR CCA 72 bp | GAAAACCAAGCAGAAGAGAACGAGACCTTCCTTCCCTaGGGTATAAGGCAGGGAGCCCTCGAGGGAGTCAAC | + |
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Preference number: 3 (lower is better) Translates to: ENQAEENETFLP*GIRQGALEGVN Trigger: GTTGACTCCCTCGAGGGCTCCCTGCCTTATACCCCAGGGAAGGAAGGTCTCGTTCTCTTCTGCTTGGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR TCA 72 bp | GGAGCCCTCGAGGGAGTCAACTTCAGCTTCAAGGCCTaGGGACCCAATCAGAAAAACAAATGCACCACCATC | + |
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Preference number: 3 (lower is better) Translates to: GALEGVNFSFKA*GPNQKNKCTTI Trigger: GATGGTGGTGCATTTGTTTTTCTGATTGGGTCCTCAGGCCTTGAAGCTGAAGTTGACTCCCTCGAGGGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR TCA 72 bp | TGGACCAGGGTGCAAGGTGAGGACACACATCTATCATaGATATTTTGGCACGCTGCAGAGGACAGGTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: WTRVQGEDTHLS*IFWHAAEDRSA Trigger: TGCAGACCTGTCCTCTGCAGCGTGCCAAAATATTCATGATAGATGTGTGTCCTCACCTTGCACCCTGGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CCA 90 bp | GTCCTCCAGCTGACCCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCACAGGAAGCGGTCCCATaGGCTGCACCCACGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: VLQLTPSECLQETWGCYPQEAVP*AAPTGM Trigger: CATCCCCGTGGGTGCAGCCCATGGGACCGCTTCCTG...TGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAGCTGGAGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CCA 90 bp | GTCCTCCAGCTGACCCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCACCAGTAGCTAGGGGCTaGCTGAAGGCAGCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VLQLTPSECLQETWGCYPPVARG*LKAAGG Trigger: CCCTCCTGCTGCCTTCAGCCAGCCCCTAGCTACTGG...TGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAGCTGGAGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | GATCACCATCACCCAGGCACATGCCCACGTGTGGGCTTAGGTGATGTCACTCCCGGAAGTCCACCACACTaGCCAGGCCCTCGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: DHHHPGTCPRVGLGDVTPGSPPH*PGPRCR Trigger: GCGGCAGCGAGGGCCTGGGCAGTGTGGTGGACTTCC...GGGAGTGACATCACCTAAGCCCACACGTGGGCATGTGCCTGGGTGATGGTGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | GATCACCATCACCCAGGCACATGCCCACGTGTGGGCTTAGGTGATGTCACTCCCGCCAGCAGGCGCACGTaGTCAGCAGTCCCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: DHHHPGTCPRVGLGDVTPASRRT*SAVPAW Trigger: CCAGGCAGGGACTGCTGAGCACGTGCGCCTGCTGGC...GGGAGTGACATCACCTAAGCCCACACGTGGGCATGTGCCTGGGTGATGGTGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | GCTGCAGAGGACAGGTCTGCACACAGGCCTCTGAGAGGAGCGTATCCTCTACCCGCAGGCGGTCATCAGTaGTGGCCCCAGGGACTACCA | + |
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Preference number: 4 (lower is better) Translates to: AAEDRSAHRPLRGAYPLPAGGHQ*WPQGLP Trigger: TGGTAGTCCCTGGGGCCAGCACTGATGACCGCCTGC...GGGTAGAGGATACGCTCCTCTCAGAGGCCTGTGTGCAGACCTGTCCTCTGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | CCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCACCCAAGAACATTTTTGCCCAGGCCCTCGCTaGCGCTCTGTTTCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLGVPPGDLGLLPTQEHFCPGPR*RSVSSA Trigger: AGCAGAGGAAACAGAGCGGCAGCGAGGGCCTGGGCA...AAAATGTTCTTGGGTGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | GTCCTCCAGCTGACCCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCAGCAGTTCTGGGAACTTaGTCCTCAAGTAGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VLQLTPSECLQETWGCYPAVLGT*SSSRPA Trigger: TGCAGGCCTACTTGAGGAGCAAGTTCCCAGAACTGC...TGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAGCTGGAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | GATCACCATCACCCAGGCACATGCCCACGTGTGGGCTTAGGTGATGTCACTCCCCCTGCAGCCAGAGATTaGTGGCCAGCCCCTCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: DHHHPGTCPRVGLGDVTPPAARD*WPAPLG Trigger: CCCTAGAGGGGCTGGCCAGCAATCTCTGGCTGCAGG...GGGAGTGACATCACCTAAGCCCACACGTGGGCATGTGCCTGGGTGATGGTGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | GTCCTCCAGCTGACCCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCAAGAAACTCCAGGGCTTaGAGAAACCGTTCCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VLQLTPSECLQETWGCYPRNSRA*RNRSPK Trigger: CTTGGGGGAACGGTTTCTGCAAGCCCTGGAGTTTCT...TGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAGCTGGAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | AATGCACCACCATCAGGAAGCCACTGTCCTTCAGCAGCTAAGCAGCTGTCCTCCGTGCTCAGCAGTCCCTaGCTGGAGCCCGTCGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: NAPPSGSHCPSAAKQLSSVLSSP*LEPVVE Trigger: CTCTACGACGGGCTCCAGGCAGGGACTGCTGAGCAC...GGAGGACAGCTGCTTAGCTGCTGAAGGACAGTGGCTTCCTGATGGTGGTGCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR TCA 90 bp | CAGGGGAGGCCAGCCACACTCAGATGTCAGCAACCCAGAGTCTCTGGGTTTGAGACTCGTGTTGCACTTTaGGCAGCAGCTCCTCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: QGRPATLRCQQPRVSGFETRVAL*AAAPPK Trigger: CTTCGGAGGAGCTGCTGCTCAAAGTGCAACACGAGT...CTCAAACCCAGAGACTCTGGGTTGCTGACATCTGAGTGTGGCTGGCCTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCAAGGCCTGAGGACCCAATCAGAAAAACAAATGCACCACCATCAGGAGGGCGTGGGCTCCACTaGCACAGAGGGGGAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SASRPEDPIRKTNAPPSGGRGLH*HRGGGG Trigger: TCCCCCTCCCCCTCTGTGCCAGTGGAGCCCACGCCC...TCCTGATGGTGGTGCATTTGTTTTTCTGATTGGGTCCTCAGGCCTTGAAGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR TCA 90 bp | CAAATGCACCACCATCAGGAAGCCACTGTCCTTCAGCAGCTAAGCAGCTGTCCTACACTGGGGTTGAAGTaGCAGGGCAGGCTAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QMHHHQEATVLQQLSSCPTLGLK*QGRLAC Trigger: GCAGGCTAGCCTGCCCTGTCACTTCAACCCCAGTGT...AGGACAGCTGCTTAGCTGCTGAAGGACAGTGGCTTCCTGATGGTGGTGCATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | AGGTCTAGGAGCAGCCTCTATGGGATTGCCTTGCATAGACAGCACAGAGTTCAGCCCACCCGGCACGAGTaGACCAAAGGGCAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSRSSLYGIALHRQHRVQPTRHE*TKGQFW Trigger: CCAGAACTGCCCTTTGGTGCACTCGTGCCGGGTGGG...CTGAACTCTGTGCTGTCTATGCAAGGCAATCCCATAGAGGCTGCTCCTAGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | AGGTCTAGGAGCAGCCTCTATGGGATTGCCTTGCATAGACAGCACAGAGTTCAGCAGGGCAGGCTAGCCTaGTCCAAGCTGCCCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: RSRSSLYGIALHRQHRVQQGRLA*SKLPTR Trigger: TCTGGTGGGCAGCTTGGAGCAGGCTAGCCTGCCCTG...CTGAACTCTGTGCTGTCTATGCAAGGCAATCCCATAGAGGCTGCTCCTAGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CCA 90 bp | AATGCACCACCATCAGGAAGCCACTGTCCTTCAGCAGCTAAGCAGCTGTCCTCCGAGAATGAATGGGCGTaGGCTCCACTGGCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: NAPPSGSHCPSAAKQLSSENEWA*APLAQR Trigger: CCTCTGTGCCAGTGGAGCCCACGCCCATTCATTCTC...GGAGGACAGCTGCTTAGCTGCTGAAGGACAGTGGCTTCCTGATGGTGGTGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR TCA 90 bp | AGGTCTAGGAGCAGCCTCTATGGGATTGCCTTGCATAGACAGCACAGAGTTCAGCAATGGCTGGCCAGTTaGCAGAGGCTGACAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSRSSLYGIALHRQHRVQQWLAS*QRLTGP Trigger: AGGCCCTGTCAGCCTCTGTCAACTGGCCAGCCATTG...CTGAACTCTGTGCTGTCTATGCAAGGCAATCCCATAGAGGCTGCTCCTAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| 3UTR CAA 72 bp | GATGTCAGCAACCCAGAGTCTCTGGGTTTGAGACTCTaGATCACCATCACCCAGGCACATGCCCACGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: DVSNPESLGLRL*ITITQAHAHVW Trigger: CCACACGTGGGCATGTGCCTGGGTGATGGTGATCAAGAGTCTCAAACCCAGAGACTCTGGGTTGCTGACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CCA 90 bp | AGGTCTAGGAGCAGCCTCTATGGGATTGCCTTGCATAGACAGCACAGAGTTCAGTCGTGGGAGAATGAATaGGCGTGGGCTCCACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RSRSSLYGIALHRQHRVQSWENE*AWAPLA Trigger: TGCCAGTGGAGCCCACGCCCATTCATTCTCCCACGA...CTGAACTCTGTGCTGTCTATGCAAGGCAATCCCATAGAGGCTGCTCCTAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CCA 90 bp | AATTCGTGGCCCATAGAGAAAACCAAGCAGAAGAGAACGAGACCTTCCTTCCCTAGCATCGAGGCTCCCTaGCCACAGTGTCCACGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NSWPIEKTKQKRTRPSFPSIEAP*PQCPRQ Trigger: CTGGCGTGGACACTGTGGCCAGGGAGCCTCGATGCT...AGGGAAGGAAGGTCTCGTTCTCTTCTGCTTGGTTTTCTCTATGGGCCACGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CCA 90 bp | AGGTCTAGGAGCAGCCTCTATGGGATTGCCTTGCATAGACAGCACAGAGTTCAGCGAGTACCAGCATCCTaGTCATCCAGGGCCCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RSRSSLYGIALHRQHRVQRVPAS*SSRARK Trigger: TTTGCGGGCCCTGGATGACCAGGATGCTGGTACTCG...CTGAACTCTGTGCTGTCTATGCAAGGCAATCCCATAGAGGCTGCTCCTAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | AATTCGTGGCCCATAGAGAAAACCAAGCAGAAGAGAACGAGACCTTCCTTCCCTCCGCTCTGTTTCCTCTaGTTCTGGGAGAACTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NSWPIEKTKQKRTRPSFPPLCFL*FWENSA Trigger: GGCAGAGTTCTCCCAGAAGCAGAGGAAACAGAGCGG...AGGGAAGGAAGGTCTCGTTCTCTTCTGCTTGGTTTTCTCTATGGGCCACGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR GCA 90 bp | AATTCGTGGCCCATAGAGAAAACCAAGCAGAAGAGAACGAGACCTTCCTTCCCTTCCAGGCACTCGTGTTaGACTTTGAGCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSWPIEKTKQKRTRPSFPSRHSC*TLSSSS Trigger: GGAGCTGCTGCTCAAAGTGCAACACGAGTGCCTGGA...AGGGAAGGAAGGTCTCGTTCTCTTCTGCTTGGTTTTCTCTATGGGCCACGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 90 bp | GGTCCCATGGGCTGCACCCACGGGGATGAAACTCAAGCTGAGTCCTaGGTACAGCCCAGCATCGAGGCTCCCTGGCCACAGTGTCCACGC | + |
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Preference number: 5 (lower is better) Translates to: GPMGCTHGDETQAES*VQPSIEAPWPQCPR Trigger: GCGTGGACACTGTGGCCAGGGAGCCTCGATGCTGGGCTGTACGCAGGACTCAGCTTGAGTTTCATCCCCGTGGGTGCAGCCCATGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CAA 90 bp | GTCCTCCAGCTGACCCCCTCGGAGTGCCTCCAGGAGACCTGGGGCTGTTACCCAGGGGTAATCACATGCTaGCGCTCGAAGGCCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VLQLTPSECLQETWGCYPGVITC*RSKASS Trigger: GCTGCTGGCCTTCGAGCGCAAGCATGTGATTACCCC...TGGGTAACAGCCCCAGGTCTCCTGGAGGCACTCCGAGGGGGTCAGCTGGAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS TCA 90 bp | CGGGCCAGATCAGACACCCGAGCAGGCTGCCAATGGCTGGCCAGTTaGCAGAGGCTGACAGGGCCTTCCGTAGCAGCTCCAGCAAGACTC | + |
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Preference number: 5 (lower is better) Translates to: RARSDTRAGCQWLAS*QRLTGPSVAAPARL Trigger: GAGTCTTGCTGGAGCTGCTACGGAAGGCCCTGTCAGCCTCTGTCAACTGGCCAGCCATTGGCAGCCTGCTCGGGTGTCTGATCTGGCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 90 bp | GGCAGGCTAGCCTGCTCCAAGCTGCCCACCAGAAACTCCAGGGCTTaGAGAAACCGTTCCCCCAAGGCCTCCTCAGTCCAGGCCACTTCC | + |
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Preference number: 5 (lower is better) Translates to: GRLACSKLPTRNSRA*RNRSPKASSVQATS Trigger: GGAAGTGGCCTGGACTGAGGAGGCCTTGGGGGAACGGTTTCTGCAAGCCCTGGAGTTTCTGGTGGGCAGCTTGGAGCAGGCTAGCCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS TCA 90 bp | TCCTCAGTCCAGGCCACTTCCTCTTCACCCAGATGCAGAACCACCTaGGTCAGGTGGCTCCAGCCCAGCCGCACTAGAGCCGGATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SSVQATSSSPRCRTT*VRWLQPSRTRAGWP Trigger: TGGCCATCCGGCTCTAGTGCGGCTGGGCTGGAGCCACCTGACTCAGGTGGTTCTGCATCTGGGTGAAGAGGAAGTGGCCTGGACTGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 90 bp | TCATCCAGGGCCCGCAAACGGGCGGTCTCTACTGGATATAGATCCTaGAGCCAGAGATTGCTGGCCAGCCCCTCTAGGGGCCAAGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSRARKRAVSTGYRS*SQRLLASPSRGQAS Trigger: GCTGGCTTGGCCCCTAGAGGGGCTGGCCAGCAATCTCTGGCTGCAGGATCTATATCCAGTAGAGACCGCCCGTTTGCGGGCCCTGGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 90 bp | GCCAGCTGTTTCGCCAACGTCACGTGGGCTTCTGGGGTAATCACATaGTTGCGCTCGAAGGCCAGCAGCCTCTCCTGGAACGTCAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: ASCFANVTWASGVIT*LRSKASSLSWNVRH Trigger: GTGCCTGACGTTCCAGGAGAGGCTGCTGGCCTTCGAGCGCAAGCATGTGATTACCCCAGAAGCCCACGTGACGTTGGCGAAACAGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CCA 90 bp | GGCAATGTCTCCAGCCAGCTGTTTCGCCAACGTCACGTGGGCTTCTaGGGTAATCACATGCTTGCGCTCGAAGGCCAGCAGCCTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GNVSSQLFRQRHVGF*GNHMLALEGQQPLL Trigger: CAGGAGAGGCTGCTGGCCTTCGAGCGCAAGCATGTGATTACCCCAGAAGCCCACGTGACGTTGGCGAAACAGCTGGCTGGAGACATTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CCA 90 bp | AGCTCCAAGGCAATGTCTCCAGCCAGCTGTTTCGCCAACGTCACGTaGGCTTCTGGGGTAATCACATGCTTGCGCTCGAAGGCCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSKAMSPASCFANVT*ASGVITCLRSKASS Trigger: GCTGCTGGCCTTCGAGCGCAAGCATGTGATTACCCCAGAAGCCCACGTGACGTTGGCGAAACAGCTGGCTGGAGACATTGCCTTGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CAA 90 bp | GAAGCCACTGTCCTTCAGCAGCTAAGCAGCTGTCCTCCAGCTGACCCCCTCGGACACTCGTGTTGCACTTaGAGCAGCAGCTCCTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: EATVLQQLSSCPPADPLGHSCCT*SSSSSE Trigger: TTCGGAGGAGCTGCTGCTCAAAGTGCAACACGAGTG...TCCGAGGGGGTCAGCTGGAGGACAGCTGCTTAGCTGCTGAAGGACAGTGGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CAA 90 bp | GATCACCATCACCCAGGCACATGCCCACGTGTGGGCTTAGGTGATGTCACTCCCCTCCAGGCACTCGTGTaGCACTTTGAGCAGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: DHHHPGTCPRVGLGDVTPLQALV*HFEQQL Trigger: GAGCTGCTGCTCAAAGTGCAACACGAGTGCCTGGAG...GGGAGTGACATCACCTAAGCCCACACGTGGGCATGTGCCTGGGTGATGGTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS TCA 90 bp | TCCTCTTCCCGGAAGTTACCCAAGAGGTTCACACTGGGGTTGAAGTaGCAGGGCAGGCTAGCCTGCTCCAAGCTGCCCACCAGAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: SSSRKLPKRFTLGLK*QGRLACSKLPTRNS Trigger: GGAGTTTCTGGTGGGCAGCTTGGAGCAGGCTAGCCTGCCCTGTCACTTCAACCCCAGTGTGAACCTCTTGGGTAACTTCCGGGAAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 90 bp | GGGACTACCATGAGCACAGCTAAAGTGAACTCCAGGCACTCGTGTTaGACTTTGAGCAGCAGCTCCTCCGAAGCCACATCGGGCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: GTTMSTAKVNSRHSC*TLSSSSSEATSGQI Trigger: GATCTGGCCCGATGTGGCTTCGGAGGAGCTGCTGCTCAAAGTGCAACACGAGTGCCTGGAGTTCACTTTAGCTGTGCTCATGGTAGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CAA 90 bp | AGGTCTAGGAGCAGCCTCTATGGGATTGCCTTGCATAGACAGCACAGAGTTCAGTTCCAGCTGTCCCCCTaGGTGTCATCCTCATCTGGA | + |
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Preference number: 5 (lower is better) Translates to: RSRSSLYGIALHRQHRVQFQLSP*VSSSSG Trigger: TCCAGATGAGGATGACACCAAGGGGGACAGCTGGAA...CTGAACTCTGTGCTGTCTATGCAAGGCAATCCCATAGAGGCTGCTCCTAGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGCCTGAGGACCCAATCAGAAAAACAAATGCACCACCATCAGGAAGCCACCAGAAACTCCAGGGCTaGCAGAAACCGTTCCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: SRPEDPIRKTNAPPSGSHQKLQG*QKPFPQ Trigger: TTGGGGGAACGGTTTCTGCAAGCCCTGGAGTTTCTG...GTGGCTTCCTGATGGTGGTGCATTTGTTTTTCTGATTGGGTCCTCAGGCCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 72 bp | GGCTGCACCCACGGGGATGAAACTCAAGCTGAGTCCTaGGTACAGCCCAGCATCGAGGCTCCCTGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: GCTHGDETQAES*VQPSIEAPWPQ Trigger: CTGTGGCCAGGGAGCCTCGATGCTGGGCTGTACGCAGGACTCAGCTTGAGTTTCATCCCCGTGGGTGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CAA 90 bp | TCGGGCCAGATCAGACACCCGAGCAGGCTGCCAATGGCTGGCCAGTaGACAGAGGCTGACAGGGCCTTCCGTAGCAGCTCCAGCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: SGQIRHPSRLPMAGQ*TEADRAFRSSSSKT Trigger: AGTCTTGCTGGAGCTGCTACGGAAGGCCCTGTCAGCCTCTGTCAACTGGCCAGCCATTGGCAGCCTGCTCGGGTGTCTGATCTGGCCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CAA 90 bp | CGCAAACGGGCGGTCTCTACTGGATATAGATCCTGCAGCCAGAGATaGCTGGCCAGCCCCTCTAGGGGCCAAGCCAGCAGCAGGCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RKRAVSTGYRSCSQR*LASPSRGQASSRRS Trigger: TGACCGCCTGCTGCTGGCTTGGCCCCTAGAGGGGCTGGCCAGCAATCTCTGGCTGCAGGATCTATATCCAGTAGAGACCGCCCGTTTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS TCA 72 bp | TCAGACACCCGAGCAGGCTGCCAATGGCTGGCCAGTTaGCAGAGGCTGACAGGGCCTTCCGTAGCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SDTRAGCQWLAS*QRLTGPSVAAP Trigger: TGGAGCTGCTACGGAAGGCCCTGTCAGCCTCTGTCAACTGGCCAGCCATTGGCAGCCTGCTCGGGTGTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS TCA 72 bp | CAGGCCACTTCCTCTTCACCCAGATGCAGAACCACCTaGGTCAGGTGGCTCCAGCCCAGCCGCACTAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: QATSSSPRCRTT*VRWLQPSRTRA Trigger: GGCTCTAGTGCGGCTGGGCTGGAGCCACCTGACTCAGGTGGTTCTGCATCTGGGTGAAGAGGAAGTGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 72 bp | GCCCGCAAACGGGCGGTCTCTACTGGATATAGATCCTaGAGCCAGAGATTGCTGGCCAGCCCCTCTAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ARKRAVSTGYRS*SQRLLASPSRG Trigger: GCCCCTAGAGGGGCTGGCCAGCAATCTCTGGCTGCAGGATCTATATCCAGTAGAGACCGCCCGTTTGCGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 72 bp | GCCTGCTCCAAGCTGCCCACCAGAAACTCCAGGGCTTaGAGAAACCGTTCCCCCAAGGCCTCCTCAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ACSKLPTRNSRA*RNRSPKASSVQ Trigger: CTGGACTGAGGAGGCCTTGGGGGAACGGTTTCTGCAAGCCCTGGAGTTTCTGGTGGGCAGCTTGGAGCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CCA 72 bp | GTCAGGTGGCTCCAGCCCAGCCGCACTAGAGCCGGATaGCCACGACAGATACCACACAGCAGCAGCAACAAC | + |
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Preference number: 6 (lower is better) Translates to: VRWLQPSRTRAG*PRQIPHSSSNN Trigger: GTTGTTGCTGCTGCTGTGTGGTATCTGTCGTGGCCATCCGGCTCTAGTGCGGCTGGGCTGGAGCCACCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CAA 72 bp | GCTCTCAGCAGGCTCAGTTCCTTCCAGCTGTCCCCCTaGGTGTCATCCTCATCTGGAGGGCTGGTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ALSRLSSFQLSP*VSSSSGGLVAL Trigger: CAGGGCCACCAGCCCTCCAGATGAGGATGACACCAAGGGGGACAGCTGGAAGGAACTGAGCCTGCTGAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CAA 72 bp | ATCAGACACCCGAGCAGGCTGCCAATGGCTGGCCAGTaGACAGAGGCTGACAGGGCCTTCCGTAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: IRHPSRLPMAGQ*TEADRAFRSSS Trigger: GGAGCTGCTACGGAAGGCCCTGTCAGCCTCTGTCAACTGGCCAGCCATTGGCAGCCTGCTCGGGTGTCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS TCA 72 bp | CGGAAGTTACCCAAGAGGTTCACACTGGGGTTGAAGTaGCAGGGCAGGCTAGCCTGCTCCAAGCTGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: RKLPKRFTLGLK*QGRLACSKLPT Trigger: GGTGGGCAGCTTGGAGCAGGCTAGCCTGCCCTGTCACTTCAACCCCAGTGTGAACCTCTTGGGTAACTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 72 bp | TTCGCCAACGTCACGTGGGCTTCTGGGGTAATCACATaGTTGCGCTCGAAGGCCAGCAGCCTCTCCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: FANVTWASGVIT*LRSKASSLSWN Trigger: GTTCCAGGAGAGGCTGCTGGCCTTCGAGCGCAAGCATGTGATTACCCCAGAAGCCCACGTGACGTTGGCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CCA 72 bp | TCCAGCCAGCTGTTTCGCCAACGTCACGTGGGCTTCTaGGGTAATCACATGCTTGCGCTCGAAGGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSQLFRQRHVGF*GNHMLALEGQQ Trigger: CTGCTGGCCTTCGAGCGCAAGCATGTGATTACCCCAGAAGCCCACGTGACGTTGGCGAAACAGCTGGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CCA 72 bp | GCAATGTCTCCAGCCAGCTGTTTCGCCAACGTCACGTaGGCTTCTGGGGTAATCACATGCTTGCGCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: AMSPASCFANVT*ASGVITCLRSK Trigger: CTTCGAGCGCAAGCATGTGATTACCCCAGAAGCCCACGTGACGTTGGCGAAACAGCTGGCTGGAGACATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS CAA 90 bp | ACCATGAGCACAGCTAAAGTGAACTCCAGGCACTCGTGTTGCACTTaGAGCAGCAGCTCCTCCGAAGCCACATCGGGCCAGATCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: TMSTAKVNSRHSCCT*SSSSSEATSGQIRH Trigger: GTGTCTGATCTGGCCCGATGTGGCTTCGGAGGAGCTGCTGCTCAAAGTGCAACACGAGTGCCTGGAGTTCACTTTAGCTGTGCTCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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| CDS GCA 72 bp | ATGAGCACAGCTAAAGTGAACTCCAGGCACTCGTGTTaGACTTTGAGCAGCAGCTCCTCCGAAGCCACATCG | + |
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Preference number: 6 (lower is better) Translates to: MSTAKVNSRHSC*TLSSSSSEATS Trigger: CGATGTGGCTTCGGAGGAGCTGCTGCTCAAAGTGCAACACGAGTGCCTGGAGTTCACTTTAGCTGTGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018743.5 |
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