Pregenerated sensors for MIEF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022412Ensembl transcript IDs: ENSMUST00000023048.12, ENSMUST00000166030.2, ENSMUST00000228788.3, ENSMUST00000229138.2
Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCCTTGAGGATCTTGAGGCAAAGAGACCGGCAGCCGGAGTCCGCCTaGTCCAAAGCCCGTAAGCGTGCTGTCTCAGCAGGGCGAAGGCTC | + |
Preference number: 1 (lower is better) Translates to: ALRILRQRDRQPESA*SKARKRAVSAGRRL Trigger: GAGCCTTCGCCCTGCTGAGACAGCACGCTTACGGGCTTTGGACCAGGCGGACTCCGGCTGCCGGTCTCTTTGCCTCAAGATCCTCAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CCA 90 bp | CAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCTCTaGCCTGTGGAGGTACCTATAGTGGCAAGGACAGGGGTCAGGTGG | + |
Preference number: 1 (lower is better) Translates to: QESSEGAGLAWSCAL*PVEVPIVARTGVRW Trigger: CCACCTGACCCCTGTCCTTGCCACTATAGGTACCTCCACAGGCCAGAGGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR CCA 90 bp | TCAGCCAACATGTCTGGAGACCAGTCAGCCTCCTCCTGGGCCAAGTaGAGGATGACGTTGGTTAGCTGGCTGGCAGTGAGGTGGCCCAGA | + |
Preference number: 1 (lower is better) Translates to: SANMSGDQSASSWAK*RMTLVSWLAVRWPR Trigger: TCTGGGCCACCTCACTGCCAGCCAGCTAACCAACGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTGGTCTCCAGACATGTTGGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CCA 90 bp | TGGGCCAAGTGGAGGATGACGTTGGTTAGCTGGCTGGCAGTGAGGTaGCCCAGAGCTGGAGTGGACTTGCATATGGCCTTGAGGATCTTG | + |
Preference number: 1 (lower is better) Translates to: WAKWRMTLVSWLAVR*PRAGVDLHMALRIL Trigger: CAAGATCCTCAAGGCCATATGCAAGTCCACTCCAGCTCTGGGCCACCTCACTGCCAGCCAGCTAACCAACGTCATCCTCCACTTGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR GCA 90 bp | GGCTGGCCAGTTGATGGAGCCTGCCACCACTTTCTCAAAGGTGTCTaGCACTGTCTTTGGGGAGAGGTAGCCACCTACAACACATCGGTC | + |
Preference number: 1 (lower is better) Translates to: GWPVDGACHHFLKGV*HCLWGEVATYNTSV Trigger: GACCGATGTGTTGTAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGACACCTTTGAGAAAGTGGTGGCAGGCTCCATCAACTGGCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CCA 90 bp | GGCTCAGCCGCCACAGGTTGTCATACTGAGCTAACCGGTGTGGTCTaGCCACCAAGACAGTGTCACCAAGGGTTACTGATGGCAGGAAGT | + |
Preference number: 1 (lower is better) Translates to: GSAATGCHTELTGVV*PPRQCHQGLLMAGS Trigger: ACTTCCTGCCATCAGTAACCCTTGGTGACACTGTCTTGGTGGCCAGACCACACCGGTTAGCTCAGTATGACAACCTGTGGCGGCTGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR TCA 90 bp | GGTGGGTGGGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTaGCCAGGACAATTACCAGCAAAACAGGAGGCACCTAGGGACCCT | + |
Preference number: 1 (lower is better) Translates to: GGWGNRRDVNLISMK*PGQLPAKQEAPRDP Trigger: AGGGTCCCTAGGTGCCTCCTGTTTTGCTGGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCCCACCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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3UTR GCA 90 bp | GAAAGCAAATGTGGTCACTGGGTTTCGGCTGGCATTCCCTCCTTTTaGCTTCCCATGGCCTCCGTGGCTAAAGCAAGGCCACCTTCTACC | + |
Preference number: 1 (lower is better) Translates to: ESKCGHWVSAGIPSF*LPMASVAKARPPST Trigger: GGTAGAAGGTGGCCTTGCTTTAGCCACGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCCAGCCGAAACCCAGTGACCACATTTGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR CCA 90 bp | GTGGTCACTGGGTTTCGGCTGGCATTCCCTCCTTTTGCCTTCCCATaGCCTCCGTGGCTAAAGCAAGGCCACCTTCTACCAGCAATTAAG | + |
Preference number: 1 (lower is better) Translates to: VVTGFRLAFPPFAFP*PPWLKQGHLLPAIK Trigger: CTTAATTGCTGGTAGAAGGTGGCCTTGCTTTAGCCACGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCCAGCCGAAACCCAGTGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR TCA 90 bp | CTACCAGCAATTAAGGGGAAACCAGCATCTTACAGGTGCTGCCTGTaGAGCCCCCACACCTGCCTTGTCTGTGTGACTCTGATGACCACA | + |
Preference number: 1 (lower is better) Translates to: LPAIKGKPASYRCCL*SPHTCLVCVTLMTT Trigger: TGTGGTCATCAGAGTCACACAGACAAGGCAGGTGTGGGGGCTTCACAGGCAGCACCTGTAAGATGCTGGTTTCCCCTTAATTGCTGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR TCA 90 bp | ACTCTGGGTTCTCACGACGAACCAGGAAGAAACCAGGGACATTCATaGTGGTGTCCTCCCCAGGTATGCATGACCACAGGTTCTGCTCCA | + |
Preference number: 1 (lower is better) Translates to: TLGSHDEPGRNQGHS*WCPPQVCMTTGSAP Trigger: TGGAGCAGAACCTGTGGTCATGCATACCTGGGGAGGACACCATCATGAATGTCCCTGGTTTCTTCCTGGTTCGTCGTGAGAACCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR GCA 90 bp | ACATTCATGATGGTGTCCTCCCCAGGTATGCATGACCACAGGTTCTaGTCCAGCACAAGGGGGACAATGAGTTGGATATGGTCAGCCGTC | + |
Preference number: 1 (lower is better) Translates to: TFMMVSSPGMHDHRF*SSTRGTMSWIWSAV Trigger: GACGGCTGACCATATCCAACTCATTGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATGCATACCTGGGGAGGACACCATCATGAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CCA 90 bp | CAAAGGCTGATTTGCCAGGGCAGAGGCTCTTTGCCAGCCTCACCCTaGAAACCTAAATACTGTCTTATTCCTCTGCAGAGCTCAGCCTGG | + |
Preference number: 1 (lower is better) Translates to: QRLICQGRGSLPASP*KPKYCLIPLQSSAW Trigger: CCAGGCTGAGCTCTGCAGAGGAATAAGACAGTATTTAGGTTTCCAGGGTGAGGCTGGCAAAGAGCCTCTGCCCTGGCAAATCAGCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR CCA 90 bp | TTGCTTAGGGTAGGGAGAGGAGATAAGCTTGTTTTCCAGGAACCATaGGCAAAGGCTGATTTGCCAGGGCAGAGGCTCTTTGCCAGCCTC | + |
Preference number: 1 (lower is better) Translates to: LLRVGRGDKLVFQEP*AKADLPGQRLFASL Trigger: GAGGCTGGCAAAGAGCCTCTGCCCTGGCAAATCAGCCTTTGCCCATGGTTCCTGGAAAACAAGCTTATCTCCTCTCCCTACCCTAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR TCA 90 bp | CAGGTATGCATGACCACAGGTTCTGCTCCAGCACAAGGGGGACAATaGGTTGGATATGGTCAGCCGTCACCACCTGCAGATCATCATAGA | + |
Preference number: 1 (lower is better) Translates to: QVCMTTGSAPAQGGQ*VGYGQPSPPADHHR Trigger: TCTATGATGATCTGCAGGTGGTGACGGCTGACCATATCCAACTCATTGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATGCATACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR TCA 90 bp | GAAGAAACCAGGGACATTCATGATGGTGTCCTCCCCAGGTATGCATaGCCACAGGTTCTGCTCCAGCACAAGGGGGACAATGAGTTGGAT | + |
Preference number: 1 (lower is better) Translates to: EETRDIHDGVLPRYA*PQVLLQHKGDNELD Trigger: ATCCAACTCATTGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATGCATACCTGGGGAGGACACCATCATGAATGTCCCTGGTTTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR GCA 90 bp | GAGGAGATAAGCTTGTTTTCCAGGAACCATGGGCAAAGGCTGATTTaGCAGGGCAGAGGCTCTTTGCCAGCCTCACCCTGGAAACCTAAA | + |
Preference number: 1 (lower is better) Translates to: EEISLFSRNHGQRLI*QGRGSLPASPWKPK Trigger: TTTAGGTTTCCAGGGTGAGGCTGGCAAAGAGCCTCTGCCCTGGCAAATCAGCCTTTGCCCATGGTTCCTGGAAAACAAGCTTATCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR GCA 90 bp | TCTTTGGGGAGAGGTAGCCACCTACAACACATCGGTCCCAATAACTaGTACCACGAGGAAAGTACTCTGGGTTCTCACGACGAACCAGGA | + |
Preference number: 1 (lower is better) Translates to: SLGRGSHLQHIGPNN*YHEESTLGSHDEPG Trigger: TCCTGGTTCGTCGTGAGAACCCAGAGTACTTTCCTCGTGGTAGCAGTTATTGGGACCGATGTGTTGTAGGTGGCTACCTCTCCCCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR TCA 90 bp | ACTGATGGCAGGAAGTCAATGACAAGATGTTTGTCCTTCTCATACTaGACTTCTAGTGTCAGGGCCTCTGGGGGTGGTGCTGGTCGGATC | + |
Preference number: 1 (lower is better) Translates to: TDGRKSMTRCLSFSY*TSSVRASGGGAGRI Trigger: GATCCGACCAGCACCACCCCCAGAGGCCCTGACACTAGAAGTTCAGTATGAGAAGGACAAACATCTTGTCATTGACTTCCTGCCATCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR TCA 90 bp | TGCCTTGTCTGTGTGACTCTGATGACCACACATAGAAACAAACAGTaGGACACAGGCTCTCCAAATCAGCTTCAGCGTGCTAGCCCTGAG | + |
Preference number: 1 (lower is better) Translates to: CLVCVTLMTTHRNKQ*DTGSPNQLQRASPE Trigger: CTCAGGGCTAGCACGCTGAAGCTGATTTGGAGAGCCTGTGTCTCACTGTTTGTTTCTATGTGTGGTCATCAGAGTCACACAGACAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR TCA 90 bp | GCTCCTATATGGCCCCAGCCAAGACAGGACACAAAGATTAGTGACTaGTTCCATTCTACCAGCAGGCAAGTGACTGGAAGGCAAGTTGTG | + |
Preference number: 1 (lower is better) Translates to: APIWPQPRQDTKISD*FHSTSRQVTGRQVV Trigger: CACAACTTGCCTTCCAGTCACTTGCCTGCTGGTAGAATGGAATCAGTCACTAATCTTTGTGTCCTGTCTTGGCTGGGGCCATATAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR TCA 90 bp | TTCCATCCAAGCATCCCAGAGCATGTGGCCGCCTCCCATACTTTATaGCAAAGAATGACAGCAAAGAAGGCATGCCCAGCTAATCCACAA | + |
Preference number: 1 (lower is better) Translates to: FHPSIPEHVAASHTL*QRMTAKKACPANPQ Trigger: TTGTGGATTAGCTGGGCATGCCTTCTTTGCTGTCATTCTTTGTCATAAAGTATGGGAGGCGGCCACATGCTCTGGGATGCTTGGATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR TCA 90 bp | TTATCAAGTCATAATGCCAAGGAAATGTACCTTGGTAGAAGGCTCTaGACACACAGTGCATCCTGCTCTCAGATCTCCCAGCCTGAAGCG | + |
Preference number: 1 (lower is better) Translates to: LSSHNAKEMYLGRRL*THSASCSQISQPEA Trigger: CGCTTCAGGCTGGGAGATCTGAGAGCAGGATGCACTGTGTGTTCAGAGCCTTCTACCAAGGTACATTTCCTTGGCATTATGACTTGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR CCA 90 bp | TACAACACATCGGTCCCAATAACTGCTACCACGAGGAAAGTACTCTaGGTTCTCACGACGAACCAGGAAGAAACCAGGGACATTCATGAT | + |
Preference number: 1 (lower is better) Translates to: YNTSVPITATTRKVL*VLTTNQEETRDIHD Trigger: ATCATGAATGTCCCTGGTTTCTTCCTGGTTCGTCGTGAGAACCCAGAGTACTTTCCTCGTGGTAGCAGTTATTGGGACCGATGTGTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR TCA 90 bp | CCACCAAGACAGTGTCACCAAGGGTTACTGATGGCAGGAAGTCAATaGCAAGATGTTTGTCCTTCTCATACTGAACTTCTAGTGTCAGGG | + |
Preference number: 1 (lower is better) Translates to: PPRQCHQGLLMAGSQ*QDVCPSHTELLVSG Trigger: CCCTGACACTAGAAGTTCAGTATGAGAAGGACAAACATCTTGTCATTGACTTCCTGCCATCAGTAACCCTTGGTGACACTGTCTTGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR TCA 90 bp | ATTCCTCTGCAGAGCTCAGCCTGGAAACATGCAATCACTCTTCTGTaGCATCAACTACAGGCAACATCTTCATTAGGCAAATGTACTCTG | + |
Preference number: 1 (lower is better) Translates to: IPLQSSAWKHAITLL*HQLQATSSLGKCTL Trigger: CAGAGTACATTTGCCTAATGAAGATGTTGCCTGTAGTTGATGTCACAGAAGAGTGATTGCATGTTTCCAGGCTGAGCTCTGCAGAGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR TCA 90 bp | CTAAGTTCACTAACATATGGCTGTGATTTAGGACATTTGGAATCTTaGGCATCTTCAAGTTCTGGGGGTTCATTTGCACTCTGCCTGGCA | + |
Preference number: 1 (lower is better) Translates to: LSSLTYGCDLGHLES*ASSSSGGSFALCLA Trigger: TGCCAGGCAGAGTGCAAATGAACCCCCAGAACTTGAAGATGCTCAAGATTCCAAATGTCCTAAATCACAGCCATATGTTAGTGAACTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR TCA 90 bp | CTAGAATGGCAAATCAGAACCAGAGTTACTGTCAGCCTCTTGTCATaGACGGAAGAAAAAGGACACATAGAAATGACATTCCAAATGTCC | + |
Preference number: 1 (lower is better) Translates to: LEWQIRTRVTVSLLS*TEEKGHIEMTFQMS Trigger: GGACATTTGGAATGTCATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTGGTTCTGATTTGCCATTCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR CAA 90 bp | AGGTGGCCCAGAGCTGGAGTGGACTTGCATATGGCCTTGAGGATCTaGAGGCAAAGAGACCGGCAGCCGGAGTCCGCCTGGTCCAAAGCC | + |
Preference number: 2 (lower is better) Translates to: RWPRAGVDLHMALRI*RQRDRQPESAWSKA Trigger: GGCTTTGGACCAGGCGGACTCCGGCTGCCGGTCTCTTTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCACTCCAGCTCTGGGCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | ACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCCACCTAGGGACCCTGTaGGGCACCAACCACGTAGCC | + |
Preference number: 2 (lower is better) Translates to: TNLPRSQVREQGWHGHVPHLGTL*GTNHVA Trigger: GGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTG...GGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | AAGGACAGGGGTCAGGTGGGAGGTTCTGGCCCTGGGTATGTTCCTGCTCTAAGGCAGTCAGCCTCCTCCTaGGCCAAGTGGAGGATGACG | + |
Preference number: 2 (lower is better) Translates to: KDRGQVGGSGPGYVPALRQSASS*AKWRMT Trigger: CGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG...CCTTAGAGCAGGAACATACCCAGGGCCAGAACCTCCCACCTGACCCCTGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | CTTGCATATGGCCTTGAGGATCTTGAGGCAAAGAGACCGGCAGCCGGAGTCCGCCTATGGCTGGCCAGTTaGTGGAGCCTGCCACCACTT | + |
Preference number: 2 (lower is better) Translates to: LAYGLEDLEAKRPAAGVRLWLAS*WSLPPL Trigger: AAGTGGTGGCAGGCTCCATCAACTGGCCAGCCATAG...GCGGACTCCGGCTGCCGGTCTCTTTGCCTCAAGATCCTCAAGGCCATATGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | ACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCATGACGTTGGTTAGCTaGCTGGCAGTGAGGTGGCCC | + |
Preference number: 2 (lower is better) Translates to: TNLPRSQVREQGWHGHVPMTLVS*LAVRWP Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAACGTCAT...GGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATAAAACACCCAAAGGCTaGGGCCAGCACTCCACACCC | + |
Preference number: 2 (lower is better) Translates to: GSTNLPRSQVREQGWHGHKTPKG*GQHSTP Trigger: GGGTGTGGAGTGCTGGCCTCAGCCTTTGGGTGTTTT...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | GGAGCAGGGCTGGCATGGTCATGTGCCCTCTGGCCTGTGGAGGTACCTATAGTGCACAGGTTGTCATACTaGGCTAACCGGTGTGGTCTG | + |
Preference number: 2 (lower is better) Translates to: GAGLAWSCALWPVEVPIVHRLSY*ANRCGL Trigger: CAGACCACACCGGTTAGCTCAGTATGACAACCTGTG...CACTATAGGTACCTCCACAGGCCAGAGGGCACATGACCATGCCAGCCCTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | GTGGTCACTGGGTTTCGGCTGGCATTCCCTCCTTTTGCCTTCCCATGGCCTCCGAGCAAATGTGGTCACTaGGTTTCGGCTGGCATTCCC | + |
Preference number: 2 (lower is better) Translates to: VVTGFRLAFPPFAFPWPPSKCGH*VSAGIP Trigger: GGGAATGCCAGCCGAAACCCAGTGACCACATTTGCT...CGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCCAGCCGAAACCCAGTGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | GTGGTCACTGGGTTTCGGCTGGCATTCCCTCCTTTTGCCTTCCCATGGCCTCCGCAGCAGCAAGAACCTTaGACTGTCTATGCCAGCCCT | + |
Preference number: 2 (lower is better) Translates to: VVTGFRLAFPPFAFPWPPQQQEP*TVYASP Trigger: AGGGCTGGCATAGACAGTCCAAGGTTCTTGCTGCTG...CGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCCAGCCGAAACCCAGTGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | GGAGCAGGGCTGGCATGGTCATGTGCCCTCTGGCCTGTGGAGGTACCTATAGTGACGAGGAAAGTACTCTaGGTTCTCACGACGAACCAG | + |
Preference number: 2 (lower is better) Translates to: GAGLAWSCALWPVEVPIVTRKVL*VLTTNQ Trigger: CTGGTTCGTCGTGAGAACCCAGAGTACTTTCCTCGT...CACTATAGGTACCTCCACAGGCCAGAGGGCACATGACCATGCCAGCCCTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | GGCAGAGGCTCTTTGCCAGCCTCACCCTGGAAACCTAAATACTGTCTTATTCCTCACCTAGGGACCCTGTaGGGCACCAACCACGTAGCC | + |
Preference number: 2 (lower is better) Translates to: GRGSLPASPWKPKYCLIPHLGTL*GTNHVA Trigger: GGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTG...AGGAATAAGACAGTATTTAGGTTTCCAGGGTGAGGCTGGCAAAGAGCCTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAACACCTAGGGACCCTGTaGGGCACCAACCACGTAGCC | + |
Preference number: 2 (lower is better) Translates to: RREQTRGQGAEPDIADRKHLGTL*GTNHVA Trigger: GGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTG...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | AGCCTGGTACAAGGGTCACTGTGTTCCCAAGGGCCTCCTCATTTACCTTGGCTTAAAACACCCAAAGGCTaGGGCCAGCACTCCACACCC | + |
Preference number: 2 (lower is better) Translates to: SLVQGSLCSQGPPHLPWLKTPKG*GQHSTP Trigger: GGGTGTGGAGTGCTGGCCTCAGCCTTTGGGTGTTTT...AAGCCAAGGTAAATGAGGAGGCCCTTGGGAACACAGTGACCCTTGTACCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
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3UTR-3UTR GCA 90 bp | TGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTTGGCCTCTGGGGGTGGTaGTGGTCGGATCACATAGTC | + |
Preference number: 2 (lower is better) Translates to: WHSQLGLSTKREAGQSIFGLWGW*WSDHIV Trigger: GACTATGTGATCCGACCAGCACCACCCCCAGAGGCC...AAAGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | AGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTGACTGGGCCTTTACCTaGCCTACGTCTGCAGCAGCA | + |
Preference number: 2 (lower is better) Translates to: SGTANWVFQQRGKQGRASDWAFT*PTSAAA Trigger: TGCTGCTGCAGACGTAGGGCAGGTAAAGGCCCAGTC...AGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | GTGGTCACTGGGTTTCGGCTGGCATTCCCTCCTTTTGCCTTCCCATGGCCTCCGGTTTTCCAGGAACCATaGGCAAAGGCTGATTTGCCA | + |
Preference number: 2 (lower is better) Translates to: VVTGFRLAFPPFAFPWPPVFQEP*AKADLP Trigger: TGGCAAATCAGCCTTTGCCCATGGTTCCTGGAAAAC...CGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCCAGCCGAAACCCAGTGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | TGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTTACCATGGGCAAAGGCTaGTTTGCCAGGGCAGAGGCT | + |
Preference number: 2 (lower is better) Translates to: WHSQLGLSTKREAGQSIFTMGKG*FARAEA Trigger: AGCCTCTGCCCTGGCAAATCAGCCTTTGCCCATGGT...AAAGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | TGGTTTTGCAGCATTCTACCAGCTCTCCCTCCAACAGGCAGCAGCAAGAACCTTCTCCCCAGGTATGCATaGCCACAGGTTCTGCTCCAG | + |
Preference number: 2 (lower is better) Translates to: WFCSILPALPPTGSSKNLLPRYA*PQVLLQ Trigger: CTGGAGCAGAACCTGTGGTCATGCATACCTGGGGAG...AAGGTTCTTGCTGCTGCCTGTTGGAGGGAGAGCTGGTAGAATGCTGCAAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | CTTGCATATGGCCTTGAGGATCTTGAGGCAAAGAGACCGGCAGCCGGAGTCCGCGATCATCATAGAGGCTaGCACTCAAGTACATGTCCC | + |
Preference number: 2 (lower is better) Translates to: LAYGLEDLEAKRPAAGVRDHHRG*HSSTCP Trigger: GGGACATGTACTTGAGTGGCAGCCTCTATGATGATC...GCGGACTCCGGCTGCCGGTCTCTTTGCCTCAAGATCCTCAAGGCCATATGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | AGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTCATGACCACAGGTTCTaGTCCAGCACAAGGGGGACA | + |
Preference number: 2 (lower is better) Translates to: SGTANWVFQQRGKQGRASHDHRF*SSTRGT Trigger: TGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...AGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | ACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCGCCTGGCATCCTAAATaGAATCAGTTCAGAGATGGC | + |
Preference number: 2 (lower is better) Translates to: TNLPRSQVREQGWHGHVPAWHPK*NQFRDG Trigger: GCCATCTCTGAACTGATTCCATTTAGGATGCCAGGC...GGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR-3UTR TCA 90 bp | AGCCCCCACACCTGCCTTGTCTGTGTGACTCTGATGACCACACATAGAAACAAAACCATGGGCAAAGGCTaGTTTGCCAGGGCAGAGGCT | + |
Preference number: 2 (lower is better) Translates to: SPHTCLVCVTLMTTHRNKTMGKG*FARAEA Trigger: AGCCTCTGCCCTGGCAAATCAGCCTTTGCCCATGGT...TTTGTTTCTATGTGTGGTCATCAGAGTCACACAGACAAGGCAGGTGTGGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATACAAGAAAGCAAATGTaGTCACTGGGTTTCGGCTGG | + |
Preference number: 2 (lower is better) Translates to: GSTNLPRSQVREQGWHGHTRKQM*SLGFGW Trigger: CCAGCCGAAACCCAGTGACCACATTTGCTTTCTTGT...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | TCACCAGTTCAATTTCTCTCCTTCAAGGAGAAGGAGGATAAAGGTTCTCTGGGCGGAGCAGGGCTGGCATaGTCATGTGCCCTCTGGCCT | + |
Preference number: 2 (lower is better) Translates to: SPVQFLSFKEKEDKGSLGGAGLA*SCALWP Trigger: AGGCCAGAGGGCACATGACCATGCCAGCCCTGCTCC...GCCCAGAGAACCTTTATCCTCCTTCTCCTTGAAGGAGAGAAATTGAACTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR CAA 90 bp | TCCAGGAACCATGGGCAAAGGCTGATTTGCCAGGGCAGAGGCTCTTaGCCAGCCTCACCCTGGAAACCTAAATACTGTCTTATTCCTCTG | + |
Preference number: 2 (lower is better) Translates to: SRNHGQRLICQGRGS*PASPWKPKYCLIPL Trigger: CAGAGGAATAAGACAGTATTTAGGTTTCCAGGGTGAGGCTGGCAAAGAGCCTCTGCCCTGGCAAATCAGCCTTTGCCCATGGTTCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | CATCAACTACAGGCAACATCTTCATTAGGCAAATGTACTCTGGGGACAAGAGCCTACAGGTGCTGCCTGTaGAGCCCCCACACCTGCCTT | + |
Preference number: 2 (lower is better) Translates to: HQLQATSSLGKCTLGTRAYRCCL*SPHTCL Trigger: AAGGCAGGTGTGGGGGCTTCACAGGCAGCACCTGTA...GGCTCTTGTCCCCAGAGTACATTTGCCTAATGAAGATGTTGCCTGTAGTTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATAACTCGTCTATTTCTTaGGGGGTGAGCTCTGCAAAT | + |
Preference number: 2 (lower is better) Translates to: GSTNLPRSQVREQGWHGHNSSIS*GVSSAN Trigger: ATTTGCAGAGCTCACCCCTCAAGAAATAGACGAGTT...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATAAGTGGGGAGCACAGTaGTTGGTTACAAAAATAGGG | + |
Preference number: 2 (lower is better) Translates to: GSTNLPRSQVREQGWHGHKWGAQ*LVTKIG Trigger: CCCTATTTTTGTAACCAAGCACTGTGCTCCCCACTT...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | TGGTTTTGCAGCATTCTACCAGCTCTCCCTCCAACAGGCAGCAGCAAGAACCTTTGTCCTCCCCAGGTATaGATGACCACAGGTTCTGCT | + |
Preference number: 2 (lower is better) Translates to: WFCSILPALPPTGSSKNLCPPQV*MTTGSA Trigger: AGCAGAACCTGTGGTCATGCATACCTGGGGAGGACA...AAGGTTCTTGCTGCTGCCTGTTGGAGGGAGAGCTGGTAGAATGCTGCAAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | CAGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCGCCTGGCATCCTAAATaGAATCAGTTCAGAGATGGC | + |
Preference number: 2 (lower is better) Translates to: QWHSQLGLSTKREAGQSIAWHPK*NQFRDG Trigger: GCCATCTCTGAACTGATTCCATTTAGGATGCCAGGC...GATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR-3UTR CCA 90 bp | TGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTTAGAAAGGCAGAGCAGTaGCACAGCCAACTGGGTCTT | + |
Preference number: 2 (lower is better) Translates to: WHSQLGLSTKREAGQSIFRKAEQ*HSQLGL Trigger: AAGACCCAGTTGGCTGTGCCACTGCTCTGCCTTTCT...AAAGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR-3UTR CCA 90 bp | TTCTACCAGCAGGCAAGTGACTGGAAGGCAAGTTGTGGACTTGGCCTCAGAGACTGCATGCTGATATTCTaGACACTCAGTCTCAGGGGC | + |
Preference number: 2 (lower is better) Translates to: FYQQASDWKASCGLGLRDCMLIF*TLSLRG Trigger: GCCCCTGAGACTGAGTGTCCAGAATATCAGCATGCA...GTCTCTGAGGCCAAGTCCACAACTTGCCTTCCAGTCACTTGCCTGCTGGTAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR-3UTR CCA 90 bp | TGGCCATATATAGCAATCTTAGCAGCAAGGTGGGAAGCCCCAACTCTTTTCTGTGCATATCAGGCAGCTTaGCCCGCAGGAAGCTCCGGA | + |
Preference number: 2 (lower is better) Translates to: WPYIAILAARWEAPTLFCAYQAA*PAGSSG Trigger: TCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGC...ACAGAAAAGAGTTGGGGCTTCCCACCTTGCTGCTAAGATTGCTATATATGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | GGCAGAGGCTCTTTGCCAGCCTCACCCTGGAAACCTAAATACTGTCTTATTCCTAACCAGGGACATTCATaGTGGTGTCCTCCCCAGGTA | + |
Preference number: 2 (lower is better) Translates to: GRGSLPASPWKPKYCLIPNQGHS*WCPPQV Trigger: TACCTGGGGAGGACACCATCATGAATGTCCCTGGTT...AGGAATAAGACAGTATTTAGGTTTCCAGGGTGAGGCTGGCAAAGAGCCTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | CACTCAGTCTCAGGGGCTTGTAACCTCCTAGCCTGGTACAAGGGTCACTGTGTTACTGTCTTATTCCTCTaGAGAGCTCAGCCTGGAAAC | + |
Preference number: 2 (lower is better) Translates to: HSVSGACNLLAWYKGHCVTVLFL*RAQPGN Trigger: GTTTCCAGGCTGAGCTCTGCAGAGGAATAAGACAGT...AACACAGTGACCCTTGTACCAGGCTAGGAGGTTACAAGCCCCTGAGACTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
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3UTR-3UTR GCA 90 bp | CATCAACTACAGGCAACATCTTCATTAGGCAAATGTACTCTGGGGACAAGAGCCAGGGCAGAGGCTCTTTaGCAGCCTCACCCTGGAAAC | + |
Preference number: 2 (lower is better) Translates to: HQLQATSSLGKCTLGTRARAEAL*QPHPGN Trigger: GTTTCCAGGGTGAGGCTGGCAAAGAGCCTCTGCCCT...GGCTCTTGTCCCCAGAGTACATTTGCCTAATGAAGATGTTGCCTGTAGTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGAGGCATTCCCTCCTTTTaGCTTCCCATGGCCTCCGTG | + |
Preference number: 2 (lower is better) Translates to: SHAAEDADFTSSISLLQGGIPSF*LPMASV Trigger: CACGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCC...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
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3UTR-3UTR GCA 90 bp | AGCCTGGTACAAGGGTCACTGTGTTCCCAAGGGCCTCCTCATTTACCTTGGCTTACAGCAAAGAAGGCATaGCCAGCTAATCCACAAACC | + |
Preference number: 2 (lower is better) Translates to: SLVQGSLCSQGPPHLPWLTAKKA*PANPQT Trigger: GGTTTGTGGATTAGCTGGGCATGCCTTCTTTGCTGT...AAGCCAAGGTAAATGAGGAGGCCCTTGGGAACACAGTGACCCTTGTACCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR-3UTR CCA 90 bp | ACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCCCCAACTCTTTTCTGTaGGTCTTATCTATGTACTCT | + |
Preference number: 2 (lower is better) Translates to: TNLPRSQVREQGWHGHVPPNSFL*VLSMYS Trigger: AGAGTACATAGATAAGACCCACAGAAAAGAGTTGGG...GGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR-3UTR CCA 90 bp | GCTCAGACAGCGAGCAGTAGAGGGTATATCCCAACTCGTCTATTTCTTGAGGGGACAATGAGTTGGATATaGTCAGCCGTCACCACCTGC | + |
Preference number: 2 (lower is better) Translates to: AQTASSRGYIPTRLFLEGTMSWI*SAVTTC Trigger: GCAGGTGGTGACGGCTGACCATATCCAACTCATTGT...CCCCTCAAGAAATAGACGAGTTGGGATATACCCTCTACTGCTCGCTGTCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | GGAGCAGGGCTGGCATGGTCATGTGCCCTCTGGCCTGTGGAGGTACCTATAGTGAACACAATACTAGAATaGCAAATCAGAACCAGAGTT | + |
Preference number: 2 (lower is better) Translates to: GAGLAWSCALWPVEVPIVNTILE*QIRTRV Trigger: AACTCTGGTTCTGATTTGCCATTCTAGTATTGTGTT...CACTATAGGTACCTCCACAGGCCAGAGGGCACATGACCATGCCAGCCCTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | AGCCCCCACACCTGCCTTGTCTGTGTGACTCTGATGACCACACATAGAAACAAACAAGAGCCACCAGGGTaGCCAAGAAAGAGAAAGATA | + |
Preference number: 2 (lower is better) Translates to: SPHTCLVCVTLMTTHRNKQEPPG*PRKRKI Trigger: TATCTTTCTCTTTCTTGGTCACCCTGGTGGCTCTTG...TTTGTTTCTATGTGTGGTCATCAGAGTCACACAGACAAGGCAGGTGTGGGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGGCAATCACTCTTCTGTaGCATCAACTACAGGCAACA | + |
Preference number: 2 (lower is better) Translates to: IEKRANKRPRGRTGHSRQAITLL*HQLQAT Trigger: TGTTGCCTGTAGTTGATGTCACAGAAGAGTGATTGC...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | TTCTACCAGCAGGCAAGTGACTGGAAGGCAAGTTGTGGACTTGGCCTCAGAGACGCCTCCCATACTTTATaGCAAAGAATGACAGCAAAG | + |
Preference number: 2 (lower is better) Translates to: FYQQASDWKASCGLGLRDASHTL*QRMTAK Trigger: CTTTGCTGTCATTCTTTGTCATAAAGTATGGGAGGC...GTCTCTGAGGCCAAGTCCACAACTTGCCTTCCAGTCACTTGCCTGCTGGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR-3UTR GCA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAGTGGGGAGCACAGTaGTTGGTTACAAAAATAGGG | + |
Preference number: 2 (lower is better) Translates to: IEKRANKRPRGRTGHSRQKWGAQ*LVTKIG Trigger: CCCTATTTTTGTAACCAAGCACTGTGCTCCCCACTT...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | CAGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTCTAAAATCTGGTTTTaGAGCATTCTACCAGCTCTC | + |
Preference number: 2 (lower is better) Translates to: QWHSQLGLSTKREAGQSISKIWF*SILPAL Trigger: GAGAGCTGGTAGAATGCTGCAAAACCAGATTTTAGA...GATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR-3UTR GCA 90 bp | CTTAGGGTAGGGAGAGGAGATAAGCTTGTTTTCCAGGAACCATGGGCAAAGGCTTTTCTCAAAGGTGTCTaGCACTGTCTTTGGGGAGAG | + |
Preference number: 2 (lower is better) Translates to: LRVGRGDKLVFQEPWAKAFLKGV*HCLWGE Trigger: CTCTCCCCAAAGACAGTGGCAGACACCTTTGAGAAA...AGCCTTTGCCCATGGTTCCTGGAAAACAAGCTTATCTCCTCTCCCTACCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | TGGTTTTGCAGCATTCTACCAGCTCTCCCTCCAACAGGCAGCAGCAAGAACCTTTCAATCTCATCAGCATaGAGTGACCAGGACAATTAC | + |
Preference number: 2 (lower is better) Translates to: WFCSILPALPPTGSSKNLSISSA*SDQDNY Trigger: GTAATTGTCCTGGTCACTTCATGCTGATGAGATTGA...AAGGTTCTTGCTGCTGCCTGTTGGAGGGAGAGCTGGTAGAATGCTGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGTCAATCTCATCAGCATaGAGTGACCAGGACAATTAC | + |
Preference number: 2 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRSISSA*SDQDNY Trigger: GTAATTGTCCTGGTCACTTCATGCTGATGAGATTGA...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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3UTR-3UTR GCA 90 bp | AGCCTGGTACAAGGGTCACTGTGTTCCCAAGGGCCTCCTCATTTACCTTGGCTTTCTAAAATCTGGTTTTaGAGCATTCTACCAGCTCTC | + |
Preference number: 2 (lower is better) Translates to: SLVQGSLCSQGPPHLPWLSKIWF*SILPAL Trigger: GAGAGCTGGTAGAATGCTGCAAAACCAGATTTTAGA...AAGCCAAGGTAAATGAGGAGGCCCTTGGGAACACAGTGACCCTTGTACCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR-3UTR GCA 90 bp | TTTGTGTCACCCTCATTAGGAACAACACAGCCACAGAGTGCATCACCAGAATCACCAGTTGATGGAGCCTaGCACCACTTTCTCAAAGGT | + |
Preference number: 2 (lower is better) Translates to: FVSPSLGTTQPQSASPESPVDGA*HHFLKG Trigger: ACCTTTGAGAAAGTGGTGGCAGGCTCCATCAACTGG...TGATTCTGGTGATGCACTCTGTGGCTGTGTTGTTCCTAATGAGGGTGACACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | AATACTTCTGACAGGAAATCTAACTCCTCTCTAAAATCTGGTTTTGCAGCATTCAGGACAGGGGTCAGGTaGGAGGTTCTGGCCCTGGGT | + |
Preference number: 2 (lower is better) Translates to: NTSDRKSNSSLKSGFAAFRTGVR*EVLALG Trigger: ACCCAGGGCCAGAACCTCCCACCTGACCCCTGTCCT...GAATGCTGCAAAACCAGATTTTAGAGAGGAGTTAGATTTCCTGTCAGAAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | CATAGAAATGACATTCCAAATGTCCCTTCCCCCACCCATAGGATGATTACATGGGTACATGTCCCGAAGTaGCATATCAGGCAGCTTGGC | + |
Preference number: 2 (lower is better) Translates to: HRNDIPNVPSPTHRMITWVHVPK*HIRQLG Trigger: GCCAAGCTGCCTGATATGCCACTTCGGGACATGTAC...CCATGTAATCATCCTATGGGTGGGGGAAGGGACATTTGGAATGTCATTTCTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | GATGTTTTCAGCTCCTACTTTGTTTTTATTAACTACCAGGAGGGCATGTTTCAGGAGGGACCCTATGGCTaGCCAGTTGATGGAGCCTGC | + |
Preference number: 2 (lower is better) Translates to: DVFSSYFVFINYQEGMFQEGPYG*PVDGAC Trigger: GCAGGCTCCATCAACTGGCCAGCCATAGGGTCCCTC...CTGAAACATGCCCTCCTGGTAGTTAATAAAAACAAAGTAGGAGCTGAAAACATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | AATGGAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGTCCTCCTGGGCCAAGTaGAGGATGACGTTGGTTAGC | + |
Preference number: 2 (lower is better) Translates to: NGISSEMAAEESYNTSDRSSWAK*RMTLVS Trigger: GCTAACCAACGTCATCCTCCACTTGGCCCAGGAGGA...CCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CAA 90 bp | TTCCATTCTACCAGCAGGCAAGTGACTGGAAGGCAAGTTGTGGACTaGGCCTCAGAGACCAAGGGTTTAAAAGACTACAAGGTGATCAAA | + |
Preference number: 2 (lower is better) Translates to: FHSTSRQVTGRQVVD*ASETKGLKDYKVIK Trigger: TTTGATCACCTTGTAGTCTTTTAAACCCTTGGTCTCTGAGGCCAAGTCCACAACTTGCCTTCCAGTCACTTGCCTGCTGGTAGAATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR-3UTR TCA 90 bp | CATCAACTACAGGCAACATCTTCATTAGGCAAATGTACTCTGGGGACAAGAGCCCAAGAGCCACCAGGGTaGCCAAGAAAGAGAAAGATA | + |
Preference number: 2 (lower is better) Translates to: HQLQATSSLGKCTLGTRAQEPPG*PRKRKI Trigger: TATCTTTCTCTTTCTTGGTCACCCTGGTGGCTCTTG...GGCTCTTGTCCCCAGAGTACATTTGCCTAATGAAGATGTTGCCTGTAGTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | CTTAGGGTAGGGAGAGGAGATAAGCTTGTTTTCCAGGAACCATGGGCAAAGGCTATGGCAGGAAGTCAATaGCAAGATGTTTGTCCTTCT | + |
Preference number: 2 (lower is better) Translates to: LRVGRGDKLVFQEPWAKAMAGSQ*QDVCPS Trigger: AGAAGGACAAACATCTTGTCATTGACTTCCTGCCAT...AGCCTTTGCCCATGGTTCCTGGAAAACAAGCTTATCTCCTCTCCCTACCCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CCA 90 bp | GGAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAACAGCAGCAAGAACCTTaGACTGTCTATGCCAGCCCT | + |
Preference number: 2 (lower is better) Translates to: GISSEMAAEESYNTSDRKQQQEP*TVYASP Trigger: AGGGCTGGCATAGACAGTCCAAGGTTCTTGCTGCTG...TTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR-3UTR CCA 90 bp | AGGATAAAGGTTCTCTGGGCCTTAGTAGCTAAGCTGCTCCTATATGGCCCCAGCCTCCTCTCTAAAATCTaGTTTTGCAGCATTCTACCA | + |
Preference number: 2 (lower is better) Translates to: RIKVLWALVAKLLLYGPSLLSKI*FCSILP Trigger: TGGTAGAATGCTGCAAAACCAGATTTTAGAGAGGAG...GCTGGGGCCATATAGGAGCAGCTTAGCTACTAAGGCCCAGAGAACCTTTATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR-3UTR CCA 90 bp | GTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCTAACTGTCTGCCACTGTCTTTaGGGAGAGGTAGCCACCTAC | + |
Preference number: 2 (lower is better) Translates to: VQRWQLRSLIILLTGNLTVCHCL*GEVATY Trigger: GTAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGAC...AGTTAGATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR TCA 90 bp | AGGATAAAGGTTCTCTGGGCCTTAGTAGCTAAGCTGCTCCTATATGGCCCCAGCAAGAAAGATAAAGCCTaGCAAGAAAGCAAATGTGGT | + |
Preference number: 2 (lower is better) Translates to: RIKVLWALVAKLLLYGPSKKDKA*QESKCG Trigger: ACCACATTTGCTTTCTTGTCAGGCTTTATCTTTCTT...GCTGGGGCCATATAGGAGCAGCTTAGCTACTAAGGCCCAGAGAACCTTTATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
||
3UTR-3UTR CCA 90 bp | AATACTTCTGACAGGAAATCTAACTCCTCTCTAAAATCTGGTTTTGCAGCATTCGGGAGGTTCTGGCCCTaGGTATGTTCCTGCTCTAAG | + |
Preference number: 2 (lower is better) Translates to: NTSDRKSNSSLKSGFAAFGRFWP*VCSCSK Trigger: CTTAGAGCAGGAACATACCCAGGGCCAGAACCTCCC...GAATGCTGCAAAACCAGATTTTAGAGAGGAGTTAGATTTCCTGTCAGAAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR-3UTR TCA 90 bp | AGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCTAACTCCTCTCGCAATCACTCTTCTGTaGCATCAACTACAGGCAACA | + |
Preference number: 2 (lower is better) Translates to: RWQLRSLIILLTGNLTPLAITLL*HQLQAT Trigger: TGTTGCCTGTAGTTGATGTCACAGAAGAGTGATTGC...GAGAGGAGTTAGATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR-3UTR TCA 90 bp | GAAAAAGGACACATAGAAATGACATTCCAAATGTCCCTTCCCCCACCCATAGGACATAGAAACAAACAGTaGGACACAGGCTCTCCAAAT | + |
Preference number: 2 (lower is better) Translates to: EKGHIEMTFQMSLPPPIGHRNKQ*DTGSPN Trigger: ATTTGGAGAGCCTGTGTCTCACTGTTTGTTTCTATG...TCCTATGGGTGGGGGAAGGGACATTTGGAATGTCATTTCTATGTGTCCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR-3UTR TCA 90 bp | CATCACCAGAATCACACTGATGGAGAGGTAGTAAGAACAGATAAAGAAAGACCTGTCAGCCTCTTGTCATaGACGGAAGAAAAAGGACAC | + |
Preference number: 2 (lower is better) Translates to: HHQNHTDGEVVRTDKERPVSLLS*TEEKGH Trigger: GTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGAC...AGGTCTTTCTTTATCTGTTCTTACTACCTCTCCATCAGTGTGATTCTGGTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
||
3UTR-3UTR CCA 90 bp | TCACCAGTTCAATTTCTCTCCTTCAAGGAGAAGGAGGATAAAGGTTCTCTGGGCCCCAACTCTTTTCTGTaGGTCTTATCTATGTACTCT | + |
Preference number: 2 (lower is better) Translates to: SPVQFLSFKEKEDKGSLGPNSFL*VLSMYS Trigger: AGAGTACATAGATAAGACCCACAGAAAAGAGTTGGG...GCCCAGAGAACCTTTATCCTCCTTCTCCTTGAAGGAGAGAAATTGAACTGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
||
3UTR-3UTR CCA 90 bp | GAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATTTGCCAGCCTCACCCTaGAAACCTAAATACTGTCTT | + |
Preference number: 2 (lower is better) Translates to: ESVQRWQLRSLIILLTGNLPASP*KPKYCL Trigger: AAGACAGTATTTAGGTTTCCAGGGTGAGGCTGGCAA...ATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR-3UTR CCA 90 bp | GATGTTTTCAGCTCCTACTTTGTTTTTATTAACTACCAGGAGGGCATGTTTCAGTTGCCAGCCTCACCCTaGAAACCTAAATACTGTCTT | + |
Preference number: 2 (lower is better) Translates to: DVFSSYFVFINYQEGMFQLPASP*KPKYCL Trigger: AAGACAGTATTTAGGTTTCCAGGGTGAGGCTGGCAA...CTGAAACATGCCCTCCTGGTAGTTAATAAAAACAAAGTAGGAGCTGAAAACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR-3UTR TCA 90 bp | TCTAAGAGGTTCCTGCTTATAAGATGGCCAAGTCATGATCTTGGATTGCAAAGCAAGAAAGATAAAGCCTaGCAAGAAAGCAAATGTGGT | + |
Preference number: 2 (lower is better) Translates to: SKRFLLIRWPSHDLGLQSKKDKA*QESKCG Trigger: ACCACATTTGCTTTCTTGTCAGGCTTTATCTTTCTT...GCTTTGCAATCCAAGATCATGACTTGGCCATCTTATAAGCAGGAACCTCTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR-3UTR TCA 90 bp | GATGTTTTCAGCTCCTACTTTGTTTTTATTAACTACCAGGAGGGCATGTTTCAGAAGATGGCCAAGTCATaGTCTTGGATTGCAAAGCAT | + |
Preference number: 2 (lower is better) Translates to: DVFSSYFVFINYQEGMFQKMAKS*SWIAKH Trigger: ATGCTTTGCAATCCAAGATCATGACTTGGCCATCTT...CTGAAACATGCCCTCCTGGTAGTTAATAAAAACAAAGTAGGAGCTGAAAACATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
||
3UTR CCA 72 bp | ATCTTGAGGCAAAGAGACCGGCAGCCGGAGTCCGCCTaGTCCAAAGCCCGTAAGCGTGCTGTCTCAGCAGGG | + |
Preference number: 3 (lower is better) Translates to: ILRQRDRQPESA*SKARKRAVSAG Trigger: CCCTGCTGAGACAGCACGCTTACGGGCTTTGGACCAGGCGGACTCCGGCTGCCGGTCTCTTTGCCTCAAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR-3UTR CAA 90 bp | GGAGCAGGGCTGGCATGGTCATGTGCCCTCTGGCCTGTGGAGGTACCTATAGTGCCTATGGCTGGCCAGTaGATGGAGCCTGCCACCACT | + |
Preference number: 3 (lower is better) Translates to: GAGLAWSCALWPVEVPIVPMAGQ*MEPATT Trigger: AGTGGTGGCAGGCTCCATCAACTGGCCAGCCATAGG...CACTATAGGTACCTCCACAGGCCAGAGGGCACATGACCATGCCAGCCCTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR TCA 72 bp | GCAGGGCGAAGGCTCAGCCGCCACAGGTTGTCATACTaGGCTAACCGGTGTGGTCTGGCCACCAAGACAGTG | + |
Preference number: 3 (lower is better) Translates to: AGRRLSRHRLSY*ANRCGLATKTV Trigger: CACTGTCTTGGTGGCCAGACCACACCGGTTAGCTCAGTATGACAACCTGTGGCGGCTGAGCCTTCGCCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR CCA 72 bp | AGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCTCTaGCCTGTGGAGGTACCTATAGTGGCAAGGACAGGG | + |
Preference number: 3 (lower is better) Translates to: SEGAGLAWSCAL*PVEVPIVARTG Trigger: CCCTGTCCTTGCCACTATAGGTACCTCCACAGGCCAGAGGGCACATGACCATGCCAGCCCTGCTCCCTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR CCA 72 bp | ACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTaGCATGGTCATGTGCCCTCTGGCCTGTGGAGGTAC | + |
Preference number: 3 (lower is better) Translates to: TNLPRSQVREQG*HGHVPSGLWRY Trigger: GTACCTCCACAGGCCAGAGGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
||
3UTR CCA 72 bp | ATGTCTGGAGACCAGTCAGCCTCCTCCTGGGCCAAGTaGAGGATGACGTTGGTTAGCTGGCTGGCAGTGAGG | + |
Preference number: 3 (lower is better) Translates to: MSGDQSASSWAK*RMTLVSWLAVR Trigger: CCTCACTGCCAGCCAGCTAACCAACGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTGGTCTCCAGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR-3UTR CAA 90 bp | AAGGACAGGGGTCAGGTGGGAGGTTCTGGCCCTGGGTATGTTCCTGCTCTAAGGTGTCTGCCACTGTCTTaGGGGAGAGGTAGCCACCTA | + |
Preference number: 3 (lower is better) Translates to: KDRGQVGGSGPGYVPALRCLPLS*GRGSHL Trigger: TAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGACA...CCTTAGAGCAGGAACATACCCAGGGCCAGAACCTCCCACCTGACCCCTGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR GCA 72 bp | TGTGGTCACTGGGTTTCGGCTGGCATTCCCTCCTTTTaGCTTCCCATGGCCTCCGTGGCTAAAGCAAGGCCA | + |
Preference number: 3 (lower is better) Translates to: CGHWVSAGIPSF*LPMASVAKARP Trigger: TGGCCTTGCTTTAGCCACGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCCAGCCGAAACCCAGTGACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR CCA 72 bp | GGACACTCAGTCTCAGGGGCTTGTAACCTCCTAGCCTaGTACAAGGGTCACTGTGTTCCCAAGGGCCTCCTC | + |
Preference number: 3 (lower is better) Translates to: GHSVSGACNLLA*YKGHCVPKGLL Trigger: GAGGAGGCCCTTGGGAACACAGTGACCCTTGTACCAGGCTAGGAGGTTACAAGCCCCTGAGACTGAGTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
||
3UTR CCA 72 bp | ACCAGCTCTCCCTCCAACAGGCAGCAGCAAGAACCTTaGACTGTCTATGCCAGCCCTTCCATGCCTACTCAG | + |
Preference number: 3 (lower is better) Translates to: TSSPSNRQQQEP*TVYASPSMPTQ Trigger: CTGAGTAGGCATGGAAGGGCTGGCATAGACAGTCCAAGGTTCTTGCTGCTGCCTGTTGGAGGGAGAGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
||
3UTR-3UTR CAA 90 bp | GCCTTCCCATGGCCTCCGTGGCTAAAGCAAGGCCACCTTCTACCAGCAATTAAGAAGTGGAGGATGACGTaGGTTAGCTGGCTGGCAGTG | + |
Preference number: 3 (lower is better) Translates to: AFPWPPWLKQGHLLPAIKKWRMT*VSWLAV Trigger: CACTGCCAGCCAGCTAACCAACGTCATCCTCCACTT...CTTAATTGCTGGTAGAAGGTGGCCTTGCTTTAGCCACGGAGGCCATGGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR-3UTR CAA 90 bp | GTGGTCACTGGGTTTCGGCTGGCATTCCCTCCTTTTGCCTTCCCATGGCCTCCGCAACTCGTCTATTTCTaGAGGGGTGAGCTCTGCAAA | + |
Preference number: 3 (lower is better) Translates to: VVTGFRLAFPPFAFPWPPQLVYF*RGELCK Trigger: TTTGCAGAGCTCACCCCTCAAGAAATAGACGAGTTG...CGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCCAGCCGAAACCCAGTGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR CCA 72 bp | TGGCAAGGACAGGGGTCAGGTGGGAGGTTCTGGCCCTaGGTATGTTCCTGCTCTAAGGCAACACCTAAGAAA | + |
Preference number: 3 (lower is better) Translates to: WQGQGSGGRFWP*VCSCSKATPKK Trigger: TTTCTTAGGTGTTGCCTTAGAGCAGGAACATACCCAGGGCCAGAACCTCCCACCTGACCCCTGTCCTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR TCA 72 bp | ATTAAGGGGAAACCAGCATCTTACAGGTGCTGCCTGTaGAGCCCCCACACCTGCCTTGTCTGTGTGACTCTG | + |
Preference number: 3 (lower is better) Translates to: IKGKPASYRCCL*SPHTCLVCVTL Trigger: CAGAGTCACACAGACAAGGCAGGTGTGGGGGCTTCACAGGCAGCACCTGTAAGATGCTGGTTTCCCCTTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR TCA 72 bp | ATGACCACAGGTTCTGCTCCAGCACAAGGGGGACAATaGGTTGGATATGGTCAGCCGTCACCACCTGCAGAT | + |
Preference number: 3 (lower is better) Translates to: MTTGSAPAQGGQ*VGYGQPSPPAD Trigger: ATCTGCAGGTGGTGACGGCTGACCATATCCAACTCATTGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR TCA 72 bp | AGGGACATTCATGATGGTGTCCTCCCCAGGTATGCATaGCCACAGGTTCTGCTCCAGCACAAGGGGGACAAT | + |
Preference number: 3 (lower is better) Translates to: RDIHDGVLPRYA*PQVLLQHKGDN Trigger: ATTGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATGCATACCTGGGGAGGACACCATCATGAATGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR GCA 72 bp | GGTCAGCCGTCACCACCTGCAGATCATCATAGAGGCTaGCACTCAAGTACATGTCCCGAAGTGGCATATCAG | + |
Preference number: 3 (lower is better) Translates to: GQPSPPADHHRG*HSSTCPEVAYQ Trigger: CTGATATGCCACTTCGGGACATGTACTTGAGTGGCAGCCTCTATGATGATCTGCAGGTGGTGACGGCTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR GCA 72 bp | ATGGTGTCCTCCCCAGGTATGCATGACCACAGGTTCTaGTCCAGCACAAGGGGGACAATGAGTTGGATATGG | + |
Preference number: 3 (lower is better) Translates to: MVSSPGMHDHRF*SSTRGTMSWIW Trigger: CCATATCCAACTCATTGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATGCATACCTGGGGAGGACACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR CCA 72 bp | CACAGGTTCTGCTCCAGCACAAGGGGGACAATGAGTTaGATATGGTCAGCCGTCACCACCTGCAGATCATCA | + |
Preference number: 3 (lower is better) Translates to: HRFCSSTRGTMS*IWSAVTTCRSS Trigger: TGATGATCTGCAGGTGGTGACGGCTGACCATATCCAACTCATTGTCCCCCTTGTGCTGGAGCAGAACCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CCA 72 bp | TGCCACCACTTTCTCAAAGGTGTCTGCCACTGTCTTTaGGGAGAGGTAGCCACCTACAACACATCGGTCCCA | + |
Preference number: 3 (lower is better) Translates to: CHHFLKGVCHCL*GEVATYNTSVP Trigger: TGGGACCGATGTGTTGTAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGACACCTTTGAGAAAGTGGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CCA 72 bp | GCCACAGGTTGTCATACTGAGCTAACCGGTGTGGTCTaGCCACCAAGACAGTGTCACCAAGGGTTACTGATG | + |
Preference number: 3 (lower is better) Translates to: ATGCHTELTGVV*PPRQCHQGLLM Trigger: CATCAGTAACCCTTGGTGACACTGTCTTGGTGGCCAGACCACACCGGTTAGCTCAGTATGACAACCTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CCA 72 bp | TCGGTCCCAATAACTGCTACCACGAGGAAAGTACTCTaGGTTCTCACGACGAACCAGGAAGAAACCAGGGAC | + |
Preference number: 3 (lower is better) Translates to: SVPITATTRKVL*VLTTNQEETRD Trigger: GTCCCTGGTTTCTTCCTGGTTCGTCGTGAGAACCCAGAGTACTTTCCTCGTGGTAGCAGTTATTGGGACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR-3UTR CAA 90 bp | TGGCCATATATAGCAATCTTAGCAGCAAGGTGGGAAGCCCCAACTCTTTTCTGTGCAGCAGCAAGAACCTaGGACTGTCTATGCCAGCCC | + |
Preference number: 3 (lower is better) Translates to: WPYIAILAARWEAPTLFCAAART*DCLCQP Trigger: GGGCTGGCATAGACAGTCCAAGGTTCTTGCTGCTGC...ACAGAAAAGAGTTGGGGCTTCCCACCTTGCTGCTAAGATTGCTATATATGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR-3UTR CAA 90 bp | GGCAGAGGCTCTTTGCCAGCCTCACCCTGGAAACCTAAATACTGTCTTATTCCTAAGGGGGACAATGAGTaGGATATGGTCAGCCGTCAC | + |
Preference number: 3 (lower is better) Translates to: GRGSLPASPWKPKYCLIPKGDNE*DMVSRH Trigger: GTGACGGCTGACCATATCCAACTCATTGTCCCCCTT...AGGAATAAGACAGTATTTAGGTTTCCAGGGTGAGGCTGGCAAAGAGCCTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR TCA 72 bp | GGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTaGCCAGGACAATTACCAGCAAAACAGGAGGCACCT | + |
Preference number: 3 (lower is better) Translates to: GNRRDVNLISMK*PGQLPAKQEAP Trigger: AGGTGCCTCCTGTTTTGCTGGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
||
3UTR TCA 72 bp | AGCATCCCAGAGCATGTGGCCGCCTCCCATACTTTATaGCAAAGAATGACAGCAAAGAAGGCATGCCCAGCT | + |
Preference number: 3 (lower is better) Translates to: SIPEHVAASHTL*QRMTAKKACPA Trigger: AGCTGGGCATGCCTTCTTTGCTGTCATTCTTTGTCATAAAGTATGGGAGGCGGCCACATGCTCTGGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR TCA 72 bp | TGGCCCCAGCCAAGACAGGACACAAAGATTAGTGACTaGTTCCATTCTACCAGCAGGCAAGTGACTGGAAGG | + |
Preference number: 3 (lower is better) Translates to: WPQPRQDTKISD*FHSTSRQVTGR Trigger: CCTTCCAGTCACTTGCCTGCTGGTAGAATGGAATCAGTCACTAATCTTTGTGTCCTGTCTTGGCTGGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
||
3UTR GCA 72 bp | AGAGGTAGCCACCTACAACACATCGGTCCCAATAACTaGTACCACGAGGAAAGTACTCTGGGTTCTCACGAC | + |
Preference number: 3 (lower is better) Translates to: RGSHLQHIGPNN*YHEESTLGSHD Trigger: GTCGTGAGAACCCAGAGTACTTTCCTCGTGGTAGCAGTTATTGGGACCGATGTGTTGTAGGTGGCTACCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR CCA 72 bp | GTAGGGAGAGGAGATAAGCTTGTTTTCCAGGAACCATaGGCAAAGGCTGATTTGCCAGGGCAGAGGCTCTTT | + |
Preference number: 3 (lower is better) Translates to: VGRGDKLVFQEP*AKADLPGQRLF Trigger: AAAGAGCCTCTGCCCTGGCAAATCAGCCTTTGCCCATGGTTCCTGGAAAACAAGCTTATCTCCTCTCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR GCA 72 bp | ACCCACATCACTCCACCTGCAGTTAAACATAGAACCTaGATGCTGATATTCTGGACACTCAGTCTCAGGGGC | + |
Preference number: 3 (lower is better) Translates to: THITPPAVKHRT*MLIFWTLSLRG Trigger: GCCCCTGAGACTGAGTGTCCAGAATATCAGCATGCAGGTTCTATGTTTAACTGCAGGTGGAGTGATGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
||
3UTR CCA 72 bp | TTCTCTCCTTCAAGGAGAAGGAGGATAAAGGTTCTCTaGGCCTTAGTAGCTAAGCTGCTCCTATATGGCCCC | + |
Preference number: 3 (lower is better) Translates to: FSPSRRRRIKVL*ALVAKLLLYGP Trigger: GGGGCCATATAGGAGCAGCTTAGCTACTAAGGCCCAGAGAACCTTTATCCTCCTTCTCCTTGAAGGAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
||
3UTR-3UTR CAA 90 bp | GGAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAAGCAGCAGCAAGAACCTaGGACTGTCTATGCCAGCCC | + |
Preference number: 3 (lower is better) Translates to: GISSEMAAEESYNTSDRKAAART*DCLCQP Trigger: GGGCTGGCATAGACAGTCCAAGGTTCTTGCTGCTGC...TTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
||
3UTR TCA 72 bp | CATAATGCCAAGGAAATGTACCTTGGTAGAAGGCTCTaGACACACAGTGCATCCTGCTCTCAGATCTCCCAG | + |
Preference number: 3 (lower is better) Translates to: HNAKEMYLGRRL*THSASCSQISQ Trigger: CTGGGAGATCTGAGAGCAGGATGCACTGTGTGTTCAGAGCCTTCTACCAAGGTACATTTCCTTGGCATTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
||
3UTR TCA 72 bp | AGGAAGTCAATGACAAGATGTTTGTCCTTCTCATACTaGACTTCTAGTGTCAGGGCCTCTGGGGGTGGTGCT | + |
Preference number: 3 (lower is better) Translates to: RKSMTRCLSFSY*TSSVRASGGGA Trigger: AGCACCACCCCCAGAGGCCCTGACACTAGAAGTTCAGTATGAGAAGGACAAACATCTTGTCATTGACTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR TCA 72 bp | TGTGTGACTCTGATGACCACACATAGAAACAAACAGTaGGACACAGGCTCTCCAAATCAGCTTCAGCGTGCT | + |
Preference number: 3 (lower is better) Translates to: CVTLMTTHRNKQ*DTGSPNQLQRA Trigger: AGCACGCTGAAGCTGATTTGGAGAGCCTGTGTCTCACTGTTTGTTTCTATGTGTGGTCATCAGAGTCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR TCA 72 bp | AGCATGTGGCCGCCTCCCATACTTTATGACAAAGAATaGCAGCAAAGAAGGCATGCCCAGCTAATCCACAAA | + |
Preference number: 3 (lower is better) Translates to: SMWPPPILYDKE*QQRRHAQLIHK Trigger: TTTGTGGATTAGCTGGGCATGCCTTCTTTGCTGTCATTCTTTGTCATAAAGTATGGGAGGCGGCCACATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
||
3UTR-3UTR CAA 90 bp | TGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTTTTTCAGTTAAGGTTCTaGGCTTTATCACGTTTCTCA | + |
Preference number: 3 (lower is better) Translates to: WHSQLGLSTKREAGQSIFFQLRF*ALSRFS Trigger: TGAGAAACGTGATAAAGCCAAGAACCTTAACTGAAA...AAAGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
||
3UTR TCA 72 bp | CAGAGCTCAGCCTGGAAACATGCAATCACTCTTCTGTaGCATCAACTACAGGCAACATCTTCATTAGGCAAA | + |
Preference number: 3 (lower is better) Translates to: QSSAWKHAITLL*HQLQATSSLGK Trigger: TTTGCCTAATGAAGATGTTGCCTGTAGTTGATGTCACAGAAGAGTGATTGCATGTTTCCAGGCTGAGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
||
3UTR TCA 72 bp | CAGTGTCACCAAGGGTTACTGATGGCAGGAAGTCAATaGCAAGATGTTTGTCCTTCTCATACTGAACTTCTA | + |
Preference number: 3 (lower is better) Translates to: QCHQGLLMAGSQ*QDVCPSHTELL Trigger: TAGAAGTTCAGTATGAGAAGGACAAACATCTTGTCATTGACTTCCTGCCATCAGTAACCCTTGGTGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
||
3UTR CCA 72 bp | ATTACATGGCCATATATAGCAATCTTAGCAGCAAGGTaGGAAGCCCCAACTCTTTTCTGTGGGTCTTATCTA | + |
Preference number: 3 (lower is better) Translates to: ITWPYIAILAAR*EAPTLFCGSYL Trigger: TAGATAAGACCCACAGAAAAGAGTTGGGGCTTCCCACCTTGCTGCTAAGATTGCTATATATGGCCATGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR CCA 72 bp | TTTAGGACATTTGGAATCTTGAGCATCTTCAAGTTCTaGGGGTTCATTTGCACTCTGCCTGGCATCCTAAAT | + |
Preference number: 3 (lower is better) Translates to: FRTFGILSIFKF*GFICTLPGILN Trigger: ATTTAGGATGCCAGGCAGAGTGCAAATGAACCCCCAGAACTTGAAGATGCTCAAGATTCCAAATGTCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR CCA 72 bp | GTTCTGAGGACTTCTAAGAGGTTCCTGCTTATAAGATaGCCAAGTCATGATCTTGGATTGCAAAGCATAGTC | + |
Preference number: 3 (lower is better) Translates to: VLRTSKRFLLIR*PSHDLGLQSIV Trigger: GACTATGCTTTGCAATCCAAGATCATGACTTGGCCATCTTATAAGCAGGAACCTCTTAGAAGTCCTCAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR TCA 72 bp | CAAATCAGAACCAGAGTTACTGTCAGCCTCTTGTCATaGACGGAAGAAAAAGGACACATAGAAATGACATTC | + |
Preference number: 3 (lower is better) Translates to: QIRTRVTVSLLS*TEEKGHIEMTF Trigger: GAATGTCATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTGGTTCTGATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR-3UTR CAA 90 bp | AATACTTCTGACAGGAAATCTAACTCCTCTCTAAAATCTGGTTTTGCAGCATTCCTAATTTCAAATGGGTaGCTGCAGAGTCAGTGCTAT | + |
Preference number: 3 (lower is better) Translates to: NTSDRKSNSSLKSGFAAFLISNG*LQSQCY Trigger: ATAGCACTGACTCTGCAGCAACCCATTTGAAATTAG...GAATGCTGCAAAACCAGATTTTAGAGAGGAGTTAGATTTCCTGTCAGAAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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3UTR CAA 72 bp | CAGTCAGCCTCCTCCTGGGCCAAGTGGAGGATGACGTaGGTTAGCTGGCTGGCAGTGAGGTGGCCCAGAGCT | + |
Preference number: 4 (lower is better) Translates to: QSASSWAKWRMT*VSWLAVRWPRA Trigger: AGCTCTGGGCCACCTCACTGCCAGCCAGCTAACCAACGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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CDS-3UTR GCA 90 bp | AAGGACAGGGGTCAGGTGGGAGGTTCTGGCCCTGGGTATGTTCCTGCTCTAAGGTGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT | + |
Preference number: 4 (lower is better) Translates to: KDRGQVGGSGPGYVPALRCLARA*SPAGMA Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...CCTTAGAGCAGGAACATACCCAGGGCCAGAACCTCCCACCTGACCCCTGTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | GCCTTCCCATGGCCTCCGTGGCTAAAGCAAGGCCACCTTCTACCAGCAATTAAGGCCCCTCCTGGCCAATaGTTTGGGCCGGGGTGGGCA | + |
Preference number: 4 (lower is better) Translates to: AFPWPPWLKQGHLLPAIKAPPGQ*FGPGWA Trigger: TGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGC...CTTAATTGCTGGTAGAAGGTGGCCTTGCTTTAGCCACGGAGGCCATGGGAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
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CDS-3UTR CCA 90 bp | CAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCTCGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT | + |
Preference number: 4 (lower is better) Translates to: QSSQESSEGAGLAWSCALALQQG*LPGSGS Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...GAGGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATTGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT | + |
Preference number: 4 (lower is better) Translates to: GSTNLPRSQVREQGWHGHCLARA*SPAGMA Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | ACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCGAGGGACCCTATGGCTaGCCAGTTGATGGAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: TNLPRSQVREQGWHGHVPEGPYG*PVDGAC Trigger: GCAGGCTCCATCAACTGGCCAGCCATAGGGTCCCTC...GGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR CAA 72 bp | AGAGCTGGAGTGGACTTGCATATGGCCTTGAGGATCTaGAGGCAAAGAGACCGGCAGCCGGAGTCCGCCTGG | + |
Preference number: 4 (lower is better) Translates to: RAGVDLHMALRI*RQRDRQPESAW Trigger: CCAGGCGGACTCCGGCTGCCGGTCTCTTTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCACTCCAGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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3UTR CAA 72 bp | AGGTGGCCCAGAGCTGGAGTGGACTTGCATATGGCCTaGAGGATCTTGAGGCAAAGAGACCGGCAGCCGGAG | + |
Preference number: 4 (lower is better) Translates to: RWPRAGVDLHMA*RILRQRDRQPE Trigger: CTCCGGCTGCCGGTCTCTTTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCACTCCAGCTCTGGGCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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CDS-3UTR GCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATATGTCCACCGCAGCTTaGTTGGCCCGAGCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: GSTNLPRSQVREQGWHGHMSTAA*LARACS Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACAT...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGGGCCTCTGGGGGTGGTaGTGGTCGGATCACATAGTC | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTEGLWGW*WSDHIV Trigger: GACTATGTGATCCGACCAGCACCACCCCCAGAGGCC...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGGCCCCTCCTGGCCAATaGTTTGGGCCGGGGTGGGCA | + |
Preference number: 4 (lower is better) Translates to: IEKRANKRPRGRTGHSRQAPPGQ*FGPGWA Trigger: TGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGC...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGGAGGGACCCTATGGCTaGCCAGTTGATGGAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTEEGPYG*PVDGAC Trigger: GCAGGCTCCATCAACTGGCCAGCCATAGGGTCCCTC...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR TCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGCTATGGCTGGCCAGTTaGTGGAGCCTGCCACCACTT | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTELWLAS*WSLPPL Trigger: AAGTGGTGGCAGGCTCCATCAACTGGCCAGCCATAG...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | AGGATAAAGGTTCTCTGGGCCTTAGTAGCTAAGCTGCTCCTATATGGCCCCAGCCTACCTGGCCCCTCCTaGCCAATGGTTTGGGCCGGG | + |
Preference number: 4 (lower is better) Translates to: RIKVLWALVAKLLLYGPSLPGPS*PMVWAG Trigger: CCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAG...GCTGGGGCCATATAGGAGCAGCTTAGCTACTAAGGCCCAGAGAACCTTTATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCCTACCTGGCCCCTCCTaGCCAATGGTTTGGGCCGGG | + |
Preference number: 4 (lower is better) Translates to: GKPQGRQSHQHEVTRTITLPGPS*PMVWAG Trigger: CCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAG...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | CACTCAGTCTCAGGGGCTTGTAACCTCCTAGCCTGGTACAAGGGTCACTGTGTTGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT | + |
Preference number: 4 (lower is better) Translates to: HSVSGACNLLAWYKGHCVALQQG*LPGSGS Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...AACACAGTGACCCTTGTACCAGGCTAGGAGGTTACAAGCCCCTGAGACTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGATGACGTTGGTTAGCTaGCTGGCAGTGAGGTGGCCC | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTEMTLVS*LAVRWP Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAACGTCAT...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGTCTGTGGGAAGGGTCTaGAGGGACCGGCTCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: IEKRANKRPRGRTGHSRQSVGRV*RDRLRP Trigger: AGGCCTGAGCCGGTCCCTGCAGACCCTTCCCACAGA...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR GCA 90 bp | CAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCTCTGTCCTCCCCAGGTATaGATGACCACAGGTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: QSSQESSEGAGLAWSCALCPPQV*MTTGSA Trigger: AGCAGAACCTGTGGTCATGCATACCTGGGGAGGACA...GAGGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRALQQG*LPGSGS Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGAGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT | + |
Preference number: 4 (lower is better) Translates to: EQTRGQGAEPDIADRKARALQQG*LPGSGS Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGGTCTGCCACTGTCTTTaGGGAGAGGTAGCCACCTAC | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTEVCHCL*GEVATY Trigger: GTAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGAC...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | AGCCTGGTACAAGGGTCACTGTGTTCCCAAGGGCCTCCTCATTTACCTTGGCTTCAGGGCCTCTGGGGGTaGTGCTGGTCGGATCACATA | + |
Preference number: 4 (lower is better) Translates to: SLVQGSLCSQGPPHLPWLQGLWG*CWSDHI Trigger: TATGTGATCCGACCAGCACCACCCCCAGAGGCCCTG...AAGCCAAGGTAAATGAGGAGGCCCTTGGGAACACAGTGACCCTTGTACCAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATCTAACCGGTGTGGTCTaGCCACCAAGACAGTGTCAC | + |
Preference number: 4 (lower is better) Translates to: GSTNLPRSQVREQGWHGHLTGVV*PPRQCH Trigger: GTGACACTGTCTTGGTGGCCAGACCACACCGGTTAG...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTG | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTEGHAES*LLQVYL Trigger: CAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCC...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR TCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATCACAGGTTGTCATACTaGGCTAACCGGTGTGGTCTG | + |
Preference number: 4 (lower is better) Translates to: GSTNLPRSQVREQGWHGHHRLSY*ANRCGL Trigger: CAGACCACACCGGTTAGCTCAGTATGACAACCTGTG...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | AGCCCCCACACCTGCCTTGTCTGTGTGACTCTGATGACCACACATAGAAACAAATCTGTGGGAAGGGTCTaGAGGGACCGGCTCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: SPHTCLVCVTLMTTHRNKSVGRV*RDRLRP Trigger: AGGCCTGAGCCGGTCCCTGCAGACCCTTCCCACAGA...TTTGTTTCTATGTGTGGTCATCAGAGTCACACAGACAAGGCAGGTGTGGGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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CDS-3UTR GCA 90 bp | AGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGA | + |
Preference number: 4 (lower is better) Translates to: SGTANWVFQQRGKQGRASSSRDG*PVPVVR Trigger: TCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...AGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAATGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKCLARA*SPAGMA Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | GCCTTCCCATGGCCTCCGTGGCTAAAGCAAGGCCACCTTCTACCAGCAATTAAGAGAGCCCATCCAGTTTaGCTCCTCCCAGCTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: AFPWPPWLKQGHLLPAIKRAHPV*LLPAPL Trigger: AAGAGGAGCTGGGAGGAGCCAAACTGGATGGGCTCT...CTTAATTGCTGGTAGAAGGTGGCCTTGCTTTAGCCACGGAGGCCATGGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGGTACATGTCCCGAAGTaGCATATCAGGCAGCTTGGC | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTEVHVPK*HIRQLG Trigger: GCCAAGCTGCCTGATATGCCACTTCGGGACATGTAC...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGACAGGGCCTCTGGGGGTaGTGCTGGTCGGATCACATA | + |
Preference number: 4 (lower is better) Translates to: EQTRGQGAEPDIADRKARQGLWG*CWSDHI Trigger: TATGTGATCCGACCAGCACCACCCCCAGAGGCCCTG...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | TGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTTCAGTCAGCCTCCTCCTaGGCCAAGTGGAGGATGACG | + |
Preference number: 4 (lower is better) Translates to: WHSQLGLSTKREAGQSIFQSASS*AKWRMT Trigger: CGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG...AAAGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR CAA 72 bp | AAGCTTGTTTTCCAGGAACCATGGGCAAAGGCTGATTaGCCAGGGCAGAGGCTCTTTGCCAGCCTCACCCTG | + |
Preference number: 4 (lower is better) Translates to: KLVFQEPWAKAD*PGQRLFASLTL Trigger: CAGGGTGAGGCTGGCAAAGAGCCTCTGCCCTGGCAAATCAGCCTTTGCCCATGGTTCCTGGAAAACAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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3UTR CAA 72 bp | CCACAGGTTCTGCTCCAGCACAAGGGGGACAATGAGTaGGATATGGTCAGCCGTCACCACCTGCAGATCATC | + |
Preference number: 4 (lower is better) Translates to: PQVLLQHKGDNE*DMVSRHHLQII Trigger: GATGATCTGCAGGTGGTGACGGCTGACCATATCCAACTCATTGTCCCCCTTGTGCTGGAGCAGAACCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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CDS-3UTR TCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGCTCCCCAGGTATGCATaGCCACAGGTTCTGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRLPRYA*PQVLLQ Trigger: CTGGAGCAGAACCTGTGGTCATGCATACCTGGGGAG...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGCGATGGCCGTACCAATaGCATTGTCATCCTTCTTCC | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTERWPYQ*HCHPSS Trigger: GGAAGAAGGATGACAATGGCATTGGTACGGCCATCG...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR GCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGA | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRSSRDG*PVPVVR Trigger: TCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR GCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAATGTCCACCGCAGCTTaGTTGGCCCGAGCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKMSTAA*LARACS Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACAT...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | TGGGAGAACACAATACTAGAATGGCAAATCAGAACCAGAGTTACTGTCAGCCTCGCCCCTCCTGGCCAATaGTTTGGGCCGGGGTGGGCA | + |
Preference number: 4 (lower is better) Translates to: WENTILEWQIRTRVTVSLAPPGQ*FGPGWA Trigger: TGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGC...GAGGCTGACAGTAACTCTGGTTCTGATTTGCCATTCTAGTATTGTGTTCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCATATCAGGCAGCTTaGCCCGCAGGAAGCTCCGGA | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKAYQAA*PAGSSG Trigger: TCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGC...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGACAATGAGTTGGATATaGTCAGCCGTCACCACCTGC | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTETMSWI*SAVTTC Trigger: GCAGGTGGTGACGGCTGACCATATCCAACTCATTGT...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAACAGGGCCTCTGGGGGTaGTGCTGGTCGGATCACATA | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKQGLWG*CWSDHI Trigger: TATGTGATCCGACCAGCACCACCCCCAGAGGCCCTG...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGAGAGGTGGCCCAGAGCTaGAGTGGACTTGCATATGGC | + |
Preference number: 4 (lower is better) Translates to: EQTRGQGAEPDIADRKAREVAQS*SGLAYG Trigger: GCCATATGCAAGTCCACTCCAGCTCTGGGCCACCTC...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCATGACGTTGGTTAGCTaGCTGGCAGTGAGGTGGCCC | + |
Preference number: 4 (lower is better) Translates to: GKPQGRQSHQHEVTRTITMTLVS*LAVRWP Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAACGTCAT...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | TATTCTGGACACTCAGTCTCAGGGGCTTGTAACCTCCTAGCCTGGTACAAGGGTATGACGTTGGTTAGCTaGCTGGCAGTGAGGTGGCCC | + |
Preference number: 4 (lower is better) Translates to: YSGHSVSGACNLLAWYKGMTLVS*LAVRWP Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAACGTCAT...ACCCTTGTACCAGGCTAGGAGGTTACAAGCCCCTGAGACTGAGTGTCCAGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAACAGTCAGCCTCCTCCTaGGCCAAGTGGAGGATGACG | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKQSASS*AKWRMT Trigger: CGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | TACAAGGGTCACTGTGTTCCCAAGGGCCTCCTCATTTACCTTGGCTTGAGCTTTCAGTCAGCCTCCTCCTaGGCCAAGTGGAGGATGACG | + |
Preference number: 4 (lower is better) Translates to: YKGHCVPKGLLIYLGLSFQSASS*AKWRMT Trigger: CGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG...AAAGCTCAAGCCAAGGTAAATGAGGAGGCCCTTGGGAACACAGTGACCCTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | AGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTAACCAGGGACATTCATaGTGGTGTCCTCCCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: SGTANWVFQQRGKQGRASNQGHS*WCPPQV Trigger: TACCTGGGGAGGACACCATCATGAATGTCCCTGGTT...AGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGGGACCGGCTCAGGCCTaGCTTCATGTCCTTGTTCAA | + |
Preference number: 4 (lower is better) Translates to: IEKRANKRPRGRTGHSRQGPAQA*LHVLVQ Trigger: TTGAACAAGGACATGAAGGCAGGCCTGAGCCGGTCC...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR GCA 90 bp | TTCTACCAGCAGGCAAGTGACTGGAAGGCAAGTTGTGGACTTGGCCTCAGAGACTCTCCTGCAGGGACATaGGGAGTCGTGACTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: FYQQASDWKASCGLGLRDSPAGT*GVVTSS Trigger: TGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGA...GTCTCTGAGGCCAAGTCCACAACTTGCCTTCCAGTCACTTGCCTGCTGGTAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGCATGACCACAGGTTCTaGTCCAGCACAAGGGGGACA | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRHDHRF*SSTRGT Trigger: TGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCCATGACCACAGGTTCTaGTCCAGCACAAGGGGGACA | + |
Preference number: 4 (lower is better) Translates to: GKPQGRQSHQHEVTRTITHDHRF*SSTRGT Trigger: TGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | GGTAGCACCAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATTTTCTCAAAGGTGTCTaGCACTGTCTTTGGGGAGAG | + |
Preference number: 4 (lower is better) Translates to: GSTNLPRSQVREQGWHGHFLKGV*HCLWGE Trigger: CTCTCCCCAAAGACAGTGGCAGACACCTTTGAGAAA...ATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTGGTGCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | CAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCTCAGAGCACAAAATCGATaGCCGTACCAATGCCATTGT | + |
Preference number: 4 (lower is better) Translates to: QSSQESSEGAGLAWSCALRAQNR*PYQCHC Trigger: ACAATGGCATTGGTACGGCCATCGATTTTGTGCTCT...GAGGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGGCACCAGCCGGGCATTaGAGAGCACAAAATCGATGG | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRAPAGH*RAQNRW Trigger: CCATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGC...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCAGAGCCCATCCAGTTTaGCTCCTCCCAGCTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: GKPQGRQSHQHEVTRTITRAHPV*LLPAPL Trigger: AAGAGGAGCTGGGAGGAGCCAAACTGGATGGGCTCT...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAAGGCAGAAGAGTCTGTaGGAAGGGTCTGCAGGGACC | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKRQKSL*EGSAGT Trigger: GGTCCCTGCAGACCCTTCCCACAGACTCTTCTGCCT...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGTGGTTTGGGCCGGGGTaGGCAGAATGTATCTGTGTC | + |
Preference number: 4 (lower is better) Translates to: IEKRANKRPRGRTGHSRQWFGPG*AECICV Trigger: GACACAGATACATTCTGCCCACCCCGGCCCAAACCA...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGACTAACCGGTGTGGTCTaGCCACCAAGACAGTGTCAC | + |
Preference number: 4 (lower is better) Translates to: EQTRGQGAEPDIADRKARLTGVV*PPRQCH Trigger: GTGACACTGTCTTGGTGGCCAGACCACACCGGTTAG...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | TACAAGGGTCACTGTGTTCCCAAGGGCCTCCTCATTTACCTTGGCTTGAGCTTTGAGGTGGCCCAGAGCTaGAGTGGACTTGCATATGGC | + |
Preference number: 4 (lower is better) Translates to: YKGHCVPKGLLIYLGLSFEVAQS*SGLAYG Trigger: GCCATATGCAAGTCCACTCCAGCTCTGGGCCACCTC...AAAGCTCAAGCCAAGGTAAATGAGGAGGCCCTTGGGAACACAGTGACCCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTG | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRGHAES*LLQVYL Trigger: CAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCC...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR TCA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGAAACCAGGGACATTCATaGTGGTGTCCTCCCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: EQTRGQGAEPDIADRKARNQGHS*WCPPQV Trigger: TACCTGGGGAGGACACCATCATGAATGTCCCTGGTT...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR TCA 90 bp | TATTCTGGACACTCAGTCTCAGGGGCTTGTAACCTCCTAGCCTGGTACAAGGGTCACAGGTTGTCATACTaGGCTAACCGGTGTGGTCTG | + |
Preference number: 4 (lower is better) Translates to: YSGHSVSGACNLLAWYKGHRLSY*ANRCGL Trigger: CAGACCACACCGGTTAGCTCAGTATGACAACCTGTG...ACCCTTGTACCAGGCTAGGAGGTTACAAGCCCCTGAGACTGAGTGTCCAGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGAACTCGTCTATTTCTTaGGGGGTGAGCTCTGCAAAT | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTENSSIS*GVSSAN Trigger: ATTTGCAGAGCTCACCCCTCAAGAAATAGACGAGTT...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | CATAGAAATGACATTCCAAATGTCCCTTCCCCCACCCATAGGATGATTACATGGTCTGTGGGAAGGGTCTaGAGGGACCGGCTCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: HRNDIPNVPSPTHRMITWSVGRV*RDRLRP Trigger: AGGCCTGAGCCGGTCCCTGCAGACCCTTCCCACAGA...CCATGTAATCATCCTATGGGTGGGGGAAGGGACATTTGGAATGTCATTTCTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGATCTCCTGCAGGGACATaGGGAGTCGTGACTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: EQTRGQGAEPDIADRKARSPAGT*GVVTSS Trigger: TGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGA...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | TTTGTGTCACCCTCATTAGGAACAACACAGCCACAGAGTGCATCACCAGAATCAATGTCCACCGCAGCTTaGTTGGCCCGAGCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: FVSPSLGTTQPQSASPESMSTAA*LARACS Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACAT...TGATTCTGGTGATGCACTCTGTGGCTGTGTTGTTCCTAATGAGGGTGACACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCTGTCCTCCCCAGGTATaGATGACCACAGGTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: GKPQGRQSHQHEVTRTITCPPQV*MTTGSA Trigger: AGCAGAACCTGTGGTCATGCATACCTGGGGAGGACA...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | CTTAGGGTAGGGAGAGGAGATAAGCTTGTTTTCCAGGAACCATGGGCAAAGGCTTGGTTTGGGCCGGGGTaGGCAGAATGTATCTGTGTC | + |
Preference number: 4 (lower is better) Translates to: LRVGRGDKLVFQEPWAKAWFGPG*AECICV Trigger: GACACAGATACATTCTGCCCACCCCGGCCCAAACCA...AGCCTTTGCCCATGGTTCCTGGAAAACAAGCTTATCTCCTCTCCCTACCCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
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CDS-3UTR CCA 90 bp | GGAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAACTACCTGGCCCCTCCTaGCCAATGGTTTGGGCCGGG | + |
Preference number: 4 (lower is better) Translates to: GISSEMAAEESYNTSDRKLPGPS*PMVWAG Trigger: CCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAG...TTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGAGCATATCAGGCAGCTTaGCCCGCAGGAAGCTCCGGA | + |
Preference number: 4 (lower is better) Translates to: SHAAEDADFTSSISLLQGAYQAA*PAGSSG Trigger: TCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGC...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAATCCTCCTGGGCCAAGTaGAGGATGACGTTGGTTAGC | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKSSWAK*RMTLVS Trigger: GCTAACCAACGTCATCCTCCACTTGGCCCAGGAGGA...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR TCA 90 bp | TTTGTGTCACCCTCATTAGGAACAACACAGCCACAGAGTGCATCACCAGAATCACTCCCCAGGTATGCATaGCCACAGGTTCTGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: FVSPSLGTTQPQSASPESLPRYA*PQVLLQ Trigger: CTGGAGCAGAACCTGTGGTCATGCATACCTGGGGAG...TGATTCTGGTGATGCACTCTGTGGCTGTGTTGTTCCTAATGAGGGTGACACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | TACTGTCTTATTCCTCTGCAGAGCTCAGCCTGGAAACATGCAATCACTCTTCTGCTATGGCTGGCCAGTTaGTGGAGCCTGCCACCACTT | + |
Preference number: 4 (lower is better) Translates to: YCLIPLQSSAWKHAITLLLWLAS*WSLPPL Trigger: AAGTGGTGGCAGGCTCCATCAACTGGCCAGCCATAG...CAGAAGAGTGATTGCATGTTTCCAGGCTGAGCTCTGCAGAGGAATAAGACAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
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CDS-3UTR TCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGACTATGGCTGGCCAGTTaGTGGAGCCTGCCACCACTT | + |
Preference number: 4 (lower is better) Translates to: SHAAEDADFTSSISLLQGLWLAS*WSLPPL Trigger: AAGTGGTGGCAGGCTCCATCAACTGGCCAGCCATAG...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGATGGCAGGAAGTCAATaGCAAGATGTTTGTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: APRDPVRHQPRSQVFLTEMAGSQ*QDVCPS Trigger: AGAAGGACAAACATCTTGTCATTGACTTCCTGCCAT...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR TCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAACACAGGTTGTCATACTaGGCTAACCGGTGTGGTCTG | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKHRLSY*ANRCGL Trigger: CAGACCACACCGGTTAGCTCAGTATGACAACCTGTG...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGCGATGGCCGTACCAATaGCATTGTCATCCTTCTTCC | + |
Preference number: 4 (lower is better) Translates to: IEKRANKRPRGRTGHSRQRWPYQ*HCHPSS Trigger: GGAAGAAGGATGACAATGGCATTGGTACGGCCATCG...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR GCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGGAAAGAAGTTTCTCCTaGAGGGACATGCGGAGTCGT | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRERSFS*RDMRSR Trigger: ACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTTC...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGATCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGA | + |
Preference number: 4 (lower is better) Translates to: SHAAEDADFTSSISLLQGSSRDG*PVPVVR Trigger: TCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | TTTGTGTCACCCTCATTAGGAACAACACAGCCACAGAGTGCATCACCAGAATCATCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGA | + |
Preference number: 4 (lower is better) Translates to: FVSPSLGTTQPQSASPESSSRDG*PVPVVR Trigger: TCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...TGATTCTGGTGATGCACTCTGTGGCTGTGTTGTTCCTAATGAGGGTGACACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | TGGGAGAACACAATACTAGAATGGCAAATCAGAACCAGAGTTACTGTCAGCCTCATGTCCACCGCAGCTTaGTTGGCCCGAGCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: WENTILEWQIRTRVTVSLMSTAA*LARACS Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACAT...GAGGCTGACAGTAACTCTGGTTCTGATTTGCCATTCTAGTATTGTGTTCTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGCCAGTTGATGGAGCCTaGCACCACTTTCTCAAAGGT | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRPVDGA*HHFLKG Trigger: ACCTTTGAGAAAGTGGTGGCAGGCTCCATCAACTGG...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAATTCTTCAAGTCTACCTaGCCCCTCCTGGCCAATGGT | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKFFKST*PLLANG Trigger: ACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAA...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | TACAAGGGTCACTGTGTTCCCAAGGGCCTCCTCATTTACCTTGGCTTGAGCTTTTTCTTCAAGTCTACCTaGCCCCTCCTGGCCAATGGT | + |
Preference number: 4 (lower is better) Translates to: YKGHCVPKGLLIYLGLSFFFKST*PLLANG Trigger: ACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAA...AAAGCTCAAGCCAAGGTAAATGAGGAGGCCCTTGGGAACACAGTGACCCTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGTCACCAAGGGTTACTaGTGGCAGGAAGTCAATGAC | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKVTKGY*WQEVND Trigger: GTCATTGACTTCCTGCCATCAGTAACCCTTGGTGAC...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATTCTGTGGGAAGGGTCTaGAGGGACCGGCTCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNSVGRV*RDRLRP Trigger: AGGCCTGAGCCGGTCCCTGCAGACCCTTCCCACAGA...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGAAAGAAGTTTCTCCTaGAGGGACATGCGGAGTCGT | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKERSFS*RDMRSR Trigger: ACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTTC...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | GTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCTAACTTGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT | + |
Preference number: 4 (lower is better) Translates to: VQRWQLRSLIILLTGNLTCLARA*SPAGMA Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...AGTTAGATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGGATCATCATAGAGGCTaGCACTCAAGTACATGTCCC | + |
Preference number: 4 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRDHHRG*HSSTCP Trigger: GGGACATGTACTTGAGTGGCAGCCTCTATGATGATC...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | TCACCAGTTCAATTTCTCTCCTTCAAGGAGAAGGAGGATAAAGGTTCTCTGGGCCATGACCACAGGTTCTaGTCCAGCACAAGGGGGACA | + |
Preference number: 4 (lower is better) Translates to: SPVQFLSFKEKEDKGSLGHDHRF*SSTRGT Trigger: TGTCCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...GCCCAGAGAACCTTTATCCTCCTTCTCCTTGAAGGAGAGAAATTGAACTGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGATTTCTCAAAGGTGTCTaGCACTGTCTTTGGGGAGAG | + |
Preference number: 4 (lower is better) Translates to: EQTRGQGAEPDIADRKARFLKGV*HCLWGE Trigger: CTCTCCCCAAAGACAGTGGCAGACACCTTTGAGAAA...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR GCA 90 bp | AGCCCCCACACCTGCCTTGTCTGTGTGACTCTGATGACCACACATAGAAACAAACCAGTTGATGGAGCCTaGCACCACTTTCTCAAAGGT | + |
Preference number: 4 (lower is better) Translates to: SPHTCLVCVTLMTTHRNKPVDGA*HHFLKG Trigger: ACCTTTGAGAAAGTGGTGGCAGGCTCCATCAACTGG...TTTGTTTCTATGTGTGGTCATCAGAGTCACACAGACAAGGCAGGTGTGGGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
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CDS-3UTR GCA 90 bp | GGAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAAGGCCTCTGGGGGTGGTaGTGGTCGGATCACATAGTC | + |
Preference number: 4 (lower is better) Translates to: GISSEMAAEESYNTSDRKGLWGW*WSDHIV Trigger: GACTATGTGATCCGACCAGCACCACCCCCAGAGGCC...TTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGAAGAGCCCATCCAGTTTaGCTCCTCCCAGCTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: SHAAEDADFTSSISLLQGRAHPV*LLPAPL Trigger: AAGAGGAGCTGGGAGGAGCCAAACTGGATGGGCTCT...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | TACAAGGGTCACTGTGTTCCCAAGGGCCTCCTCATTTACCTTGGCTTGAGCTTTACGAGGAAAGTACTCTaGGTTCTCACGACGAACCAG | + |
Preference number: 4 (lower is better) Translates to: YKGHCVPKGLLIYLGLSFTRKVL*VLTTNQ Trigger: CTGGTTCGTCGTGAGAACCCAGAGTACTTTCCTCGT...AAAGCTCAAGCCAAGGTAAATGAGGAGGCCCTTGGGAACACAGTGACCCTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAACGAGGAAAGTACTCTaGGTTCTCACGACGAACCAG | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKTRKVL*VLTTNQ Trigger: CTGGTTCGTCGTGAGAACCCAGAGTACTTTCCTCGT...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | TCACCAGTTCAATTTCTCTCCTTCAAGGAGAAGGAGGATAAAGGTTCTCTGGGCCTAACCGGTGTGGTCTaGCCACCAAGACAGTGTCAC | + |
Preference number: 4 (lower is better) Translates to: SPVQFLSFKEKEDKGSLGLTGVV*PPRQCH Trigger: GTGACACTGTCTTGGTGGCCAGACCACACCGGTTAG...GCCCAGAGAACCTTTATCCTCCTTCTCCTTGAAGGAGAGAAATTGAACTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGATCCTCCTGGGCCAAGTaGAGGATGACGTTGGTTAGC | + |
Preference number: 4 (lower is better) Translates to: SHAAEDADFTSSISLLQGSSWAK*RMTLVS Trigger: GCTAACCAACGTCATCCTCCACTTGGCCCAGGAGGA...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | TGGCCATATATAGCAATCTTAGCAGCAAGGTGGGAAGCCCCAACTCTTTTCTGTTCCTCCTGGGCCAAGTaGAGGATGACGTTGGTTAGC | + |
Preference number: 4 (lower is better) Translates to: WPYIAILAARWEAPTLFCSSWAK*RMTLVS Trigger: GCTAACCAACGTCATCCTCCACTTGGCCCAGGAGGA...ACAGAAAAGAGTTGGGGCTTCCCACCTTGCTGCTAAGATTGCTATATATGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR CAA 72 bp | ACCAGCAGGCAAGTGACTGGAAGGCAAGTTGTGGACTaGGCCTCAGAGACCAAGGGTTTAAAAGACTACAAG | + |
Preference number: 4 (lower is better) Translates to: TSRQVTGRQVVD*ASETKGLKDYK Trigger: CTTGTAGTCTTTTAAACCCTTGGTCTCTGAGGCCAAGTCCACAACTTGCCTTCCAGTCACTTGCCTGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | AGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTATGGCAGGAAGTCAATaGCAAGATGTTTGTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: SGTANWVFQQRGKQGRASMAGSQ*QDVCPS Trigger: AGAAGGACAAACATCTTGTCATTGACTTCCTGCCAT...AGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | AGGATAAAGGTTCTCTGGGCCTTAGTAGCTAAGCTGCTCCTATATGGCCCCAGCAACTCGTCTATTTCTTaGGGGGTGAGCTCTGCAAAT | + |
Preference number: 4 (lower is better) Translates to: RIKVLWALVAKLLLYGPSNSSIS*GVSSAN Trigger: ATTTGCAGAGCTCACCCCTCAAGAAATAGACGAGTT...GCTGGGGCCATATAGGAGCAGCTTAGCTACTAAGGCCCAGAGAACCTTTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGATCTCCTGCAGGGACATaGGGAGTCGTGACTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: SHAAEDADFTSSISLLQGSPAGT*GVVTSS Trigger: TGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGA...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGATGTCCTCCCCAGGTATaGATGACCACAGGTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: SHAAEDADFTSSISLLQGCPPQV*MTTGSA Trigger: AGCAGAACCTGTGGTCATGCATACCTGGGGAGGACA...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATGGCCTCTGGGGGTGGTaGTGGTCGGATCACATAGTC | + |
Preference number: 4 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNGLWGW*WSDHIV Trigger: GACTATGTGATCCGACCAGCACCACCCCCAGAGGCC...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGAAGAGCACAAAATCGATaGCCGTACCAATGCCATTGT | + |
Preference number: 4 (lower is better) Translates to: EQTRGQGAEPDIADRKARRAQNR*PYQCHC Trigger: ACAATGGCATTGGTACGGCCATCGATTTTGTGCTCT...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CCA 90 bp | AGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCTAACTCCTCTCAGGCAGAAGAGTCTGTaGGAAGGGTCTGCAGGGACC | + |
Preference number: 4 (lower is better) Translates to: RWQLRSLIILLTGNLTPLRQKSL*EGSAGT Trigger: GGTCCCTGCAGACCCTTCCCACAGACTCTTCTGCCT...GAGAGGAGTTAGATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | TCCCATGCTGCAGAAGACGCTGATTTCACCAGTTCAATTTCTCTCCTTCAAGGATTCTTCAAGTCTACCTaGCCCCTCCTGGCCAATGGT | + |
Preference number: 4 (lower is better) Translates to: SHAAEDADFTSSISLLQGFFKST*PLLANG Trigger: ACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAA...TCCTTGAAGGAGAGAAATTGAACTGGTGAAATCAGCGTCTTCTGCAGCATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | TGGGAGAACACAATACTAGAATGGCAAATCAGAACCAGAGTTACTGTCAGCCTCGTCTGCCACTGTCTTTaGGGAGAGGTAGCCACCTAC | + |
Preference number: 4 (lower is better) Translates to: WENTILEWQIRTRVTVSLVCHCL*GEVATY Trigger: GTAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGAC...GAGGCTGACAGTAACTCTGGTTCTGATTTGCCATTCTAGTATTGTGTTCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | TGGGAGAACACAATACTAGAATGGCAAATCAGAACCAGAGTTACTGTCAGCCTCGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTG | + |
Preference number: 4 (lower is better) Translates to: WENTILEWQIRTRVTVSLGHAES*LLQVYL Trigger: CAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCC...GAGGCTGACAGTAACTCTGGTTCTGATTTGCCATTCTAGTATTGTGTTCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | ATTCCAAATGTCCCTTCCCCCACCCATAGGATGATTACATGGCCATATATAGCAAACCAGGGACATTCATaGTGGTGTCCTCCCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: IPNVPSPTHRMITWPYIANQGHS*WCPPQV Trigger: TACCTGGGGAGGACACCATCATGAATGTCCCTGGTT...TGCTATATATGGCCATGTAATCATCCTATGGGTGGGGGAAGGGACATTTGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | TGGTTTTGCAGCATTCTACCAGCTCTCCCTCCAACAGGCAGCAGCAAGAACCTTATGGCAGGAAGTCAATaGCAAGATGTTTGTCCTTCT | + |
Preference number: 4 (lower is better) Translates to: WFCSILPALPPTGSSKNLMAGSQ*QDVCPS Trigger: AGAAGGACAAACATCTTGTCATTGACTTCCTGCCAT...AAGGTTCTTGCTGCTGCCTGTTGGAGGGAGAGCTGGTAGAATGCTGCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAATCGGTCCCAATAACTaGTACCACGAGGAAAGTACT | + |
Preference number: 4 (lower is better) Translates to: RREQTRGQGAEPDIADRKIGPNN*YHEEST Trigger: AGTACTTTCCTCGTGGTAGCAGTTATTGGGACCGAT...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CCA 90 bp | GGAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAAAGAGCCCATCCAGTTTaGCTCCTCCCAGCTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: GISSEMAAEESYNTSDRKRAHPV*LLPAPL Trigger: AAGAGGAGCTGGGAGGAGCCAAACTGGATGGGCTCT...TTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | CAGGAGGGCATGTTTCAGTTAAGGTTCTTGGCTTTATCACGTTTCTCATACTATAGGCAGAAGAGTCTGTaGGAAGGGTCTGCAGGGACC | + |
Preference number: 4 (lower is better) Translates to: QEGMFQLRFLALSRFSYYRQKSL*EGSAGT Trigger: GGTCCCTGCAGACCCTTCCCACAGACTCTTCTGCCT...ATAGTATGAGAAACGTGATAAAGCCAAGAACCTTAACTGAAACATGCCCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATAGGCAGAAGAGTCTGTaGGAAGGGTCTGCAGGGACC | + |
Preference number: 4 (lower is better) Translates to: ESVQRWQLRSLIILLTGNRQKSL*EGSAGT Trigger: GGTCCCTGCAGACCCTTCCCACAGACTCTTCTGCCT...ATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | CATCAACTACAGGCAACATCTTCATTAGGCAAATGTACTCTGGGGACAAGAGCCACAATGAGTTGGATATaGTCAGCCGTCACCACCTGC | + |
Preference number: 4 (lower is better) Translates to: HQLQATSSLGKCTLGTRATMSWI*SAVTTC Trigger: GCAGGTGGTGACGGCTGACCATATCCAACTCATTGT...GGCTCTTGTCCCCAGAGTACATTTGCCTAATGAAGATGTTGCCTGTAGTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023048.12 |
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CDS-3UTR CCA 90 bp | TCACCAGTTCAATTTCTCTCCTTCAAGGAGAAGGAGGATAAAGGTTCTCTGGGCACAATGAGTTGGATATaGTCAGCCGTCACCACCTGC | + |
Preference number: 4 (lower is better) Translates to: SPVQFLSFKEKEDKGSLGTMSWI*SAVTTC Trigger: GCAGGTGGTGACGGCTGACCATATCCAACTCATTGT...GCCCAGAGAACCTTTATCCTCCTTCTCCTTGAAGGAGAGAAATTGAACTGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GGAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAAGTCTGCCACTGTCTTTaGGGAGAGGTAGCCACCTAC | + |
Preference number: 4 (lower is better) Translates to: GISSEMAAEESYNTSDRKVCHCL*GEVATY Trigger: GTAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGAC...TTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CATAGAAATGACATTCCAAATGTCCCTTCCCCCACCCATAGGATGATTACATGGCGATGGCCGTACCAATaGCATTGTCATCCTTCTTCC | + |
Preference number: 4 (lower is better) Translates to: HRNDIPNVPSPTHRMITWRWPYQ*HCHPSS Trigger: GGAAGAAGGATGACAATGGCATTGGTACGGCCATCG...CCATGTAATCATCCTATGGGTGGGGGAAGGGACATTTGGAATGTCATTTCTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | GAAAAAGGACACATAGAAATGACATTCCAAATGTCCCTTCCCCCACCCATAGGACGATGGCCGTACCAATaGCATTGTCATCCTTCTTCC | + |
Preference number: 4 (lower is better) Translates to: EKGHIEMTFQMSLPPPIGRWPYQ*HCHPSS Trigger: GGAAGAAGGATGACAATGGCATTGGTACGGCCATCG...TCCTATGGGTGGGGGAAGGGACATTTGGAATGTCATTTCTATGTGTCCTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CATAGAAATGACATTCCAAATGTCCCTTCCCCCACCCATAGGATGATTACATGGCCAGTTGATGGAGCCTaGCACCACTTTCTCAAAGGT | + |
Preference number: 4 (lower is better) Translates to: HRNDIPNVPSPTHRMITWPVDGA*HHFLKG Trigger: ACCTTTGAGAAAGTGGTGGCAGGCTCCATCAACTGG...CCATGTAATCATCCTATGGGTGGGGGAAGGGACATTTGGAATGTCATTTCTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCTAACTGCACCAGCCGGGCATTaGAGAGCACAAAATCGATGG | + |
Preference number: 4 (lower is better) Translates to: VQRWQLRSLIILLTGNLTAPAGH*RAQNRW Trigger: CCATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGC...AGTTAGATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCTAACTTGGTTTGGGCCGGGGTaGGCAGAATGTATCTGTGTC | + |
Preference number: 4 (lower is better) Translates to: VQRWQLRSLIILLTGNLTWFGPG*AECICV Trigger: GACACAGATACATTCTGCCCACCCCGGCCCAAACCA...AGTTAGATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | AATACTTCTGACAGGAAATCTAACTCCTCTCTAAAATCTGGTTTTGCAGCATTCGCATATCAGGCAGCTTaGCCCGCAGGAAGCTCCGGA | + |
Preference number: 4 (lower is better) Translates to: NTSDRKSNSSLKSGFAAFAYQAA*PAGSSG Trigger: TCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGC...GAATGCTGCAAAACCAGATTTTAGAGAGGAGTTAGATTTCCTGTCAGAAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | TGGCCATATATAGCAATCTTAGCAGCAAGGTGGGAAGCCCCAACTCTTTTCTGTAGAGCACAAAATCGATaGCCGTACCAATGCCATTGT | + |
Preference number: 4 (lower is better) Translates to: WPYIAILAARWEAPTLFCRAQNR*PYQCHC Trigger: ACAATGGCATTGGTACGGCCATCGATTTTGTGCTCT...ACAGAAAAGAGTTGGGGCTTCCCACCTTGCTGCTAAGATTGCTATATATGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | GAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATGTACATGTCCCGAAGTaGCATATCAGGCAGCTTGGC | + |
Preference number: 4 (lower is better) Translates to: ESVQRWQLRSLIILLTGNVHVPK*HIRQLG Trigger: GCCAAGCTGCCTGATATGCCACTTCGGGACATGTAC...ATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATGTCACCAAGGGTTACTaGTGGCAGGAAGTCAATGAC | + |
Preference number: 4 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNVTKGY*WQEVND Trigger: GTCATTGACTTCCTGCCATCAGTAACCCTTGGTGAC...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | TGGGAGAACACAATACTAGAATGGCAAATCAGAACCAGAGTTACTGTCAGCCTCAACTCGTCTATTTCTTaGGGGGTGAGCTCTGCAAAT | + |
Preference number: 4 (lower is better) Translates to: WENTILEWQIRTRVTVSLNSSIS*GVSSAN Trigger: ATTTGCAGAGCTCACCCCTCAAGAAATAGACGAGTT...GAGGCTGACAGTAACTCTGGTTCTGATTTGCCATTCTAGTATTGTGTTCTCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATACGAGGAAAGTACTCTaGGTTCTCACGACGAACCAG | + |
Preference number: 4 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNTRKVL*VLTTNQ Trigger: CTGGTTCGTCGTGAGAACCCAGAGTACTTTCCTCGT...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | GATGTTTTCAGCTCCTACTTTGTTTTTATTAACTACCAGGAGGGCATGTTTCAGGAAAGAAGTTTCTCCTaGAGGGACATGCGGAGTCGT | + |
Preference number: 4 (lower is better) Translates to: DVFSSYFVFINYQEGMFQERSFS*RDMRSR Trigger: ACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTTC...CTGAAACATGCCCTCCTGGTAGTTAATAAAAACAAAGTAGGAGCTGAAAACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | GAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATGATCATCATAGAGGCTaGCACTCAAGTACATGTCCC | + |
Preference number: 4 (lower is better) Translates to: ESVQRWQLRSLIILLTGNDHHRG*HSSTCP Trigger: GGGACATGTACTTGAGTGGCAGCCTCTATGATGATC...ATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATGATCATCATAGAGGCTaGCACTCAAGTACATGTCCC | + |
Preference number: 4 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNDHHRG*HSSTCP Trigger: GGGACATGTACTTGAGTGGCAGCCTCTATGATGATC...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATTTTCTCAAAGGTGTCTaGCACTGTCTTTGGGGAGAG | + |
Preference number: 4 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNFLKGV*HCLWGE Trigger: CTCTCCCCAAAGACAGTGGCAGACACCTTTGAGAAA...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CCA 90 bp | AATACTTCTGACAGGAAATCTAACTCCTCTCTAAAATCTGGTTTTGCAGCATTCGTACATGTCCCGAAGTaGCATATCAGGCAGCTTGGC | + |
Preference number: 4 (lower is better) Translates to: NTSDRKSNSSLKSGFAAFVHVPK*HIRQLG Trigger: GCCAAGCTGCCTGATATGCCACTTCGGGACATGTAC...GAATGCTGCAAAACCAGATTTTAGAGAGGAGTTAGATTTCCTGTCAGAAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR CAA 72 bp | CAGTTTTATCAAGTCATAATGCCAAGGAAATGTACCTaGGTAGAAGGCTCTGAACACACAGTGCATCCTGCT | + |
Preference number: 4 (lower is better) Translates to: QFYQVIMPRKCT*VEGSEHTVHPA Trigger: AGCAGGATGCACTGTGTGTTCAGAGCCTTCTACCAAGGTACATTTCCTTGGCATTATGACTTGATAAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR TCA 90 bp | AATACTTCTGACAGGAAATCTAACTCCTCTCTAAAATCTGGTTTTGCAGCATTCGTCACCAAGGGTTACTaGTGGCAGGAAGTCAATGAC | + |
Preference number: 4 (lower is better) Translates to: NTSDRKSNSSLKSGFAAFVTKGY*WQEVND Trigger: GTCATTGACTTCCTGCCATCAGTAACCCTTGGTGAC...GAATGCTGCAAAACCAGATTTTAGAGAGGAGTTAGATTTCCTGTCAGAAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CAGGAGGGCATGTTTCAGTTAAGGTTCTTGGCTTTATCACGTTTCTCATACTATATCGGTCCCAATAACTaGTACCACGAGGAAAGTACT | + |
Preference number: 4 (lower is better) Translates to: QEGMFQLRFLALSRFSYYIGPNN*YHEEST Trigger: AGTACTTTCCTCGTGGTAGCAGTTATTGGGACCGAT...ATAGTATGAGAAACGTGATAAAGCCAAGAACCTTAACTGAAACATGCCCTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR GCA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATATCGGTCCCAATAACTaGTACCACGAGGAAAGTACT | + |
Preference number: 4 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNIGPNN*YHEEST Trigger: AGTACTTTCCTCGTGGTAGCAGTTATTGGGACCGAT...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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3UTR CAA 72 bp | TACAGTTTTAGGCATCAAGTATATAGTCTGCTAATCTaGACACTCTCAAAATACCTCCCAAACAGAAGTAGG | + |
Preference number: 4 (lower is better) Translates to: YSFRHQVYSLLI*TLSKYLPNRSR Trigger: CCTACTTCTGTTTGGGAGGTATTTTGAGAGTGTCAAGATTAGCAGACTATATACTTGATGCCTAAAACTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS GCA 90 bp | GCCCGCAGGAAGCTCCGGAGCTCAGCACATATGTCCACCGCAGCTTaGTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTGCCCGGTTC | + |
Preference number: 5 (lower is better) Translates to: ARRKLRSSAHMSTAA*LARACSPAGMAARF Trigger: GAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATATGTGCTGAGCTCCGGAGCTTCCTGCGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 90 bp | GCAGGAAGCTCCGGAGCTCAGCACATATGTCCACCGCAGCTTGCTTaGCCCGAGCCTGCTCTCCAGCAGGGATGGCTGCCCGGTTCCGGT | + |
Preference number: 5 (lower is better) Translates to: AGSSGAQHICPPQLA*PEPALQQGWLPGSG Trigger: ACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATATGTGCTGAGCTCCGGAGCTTCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | GTGGTCACTGGGTTTCGGCTGGCATTCCCTCCTTTTGCCTTCCCATGGCCTCCGTATGTCCACCGCAGCTaGCTTGGCCCGAGCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: VVTGFRLAFPPFAFPWPPYVHRS*LGPSLL Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATA...CGGAGGCCATGGGAAGGCAAAAGGAGGGAATGCCAGCCGAAACCCAGTGACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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CDS CCA 90 bp | TGTCCACCGCAGCTTGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGTAAGAAAGAAGTTTCTCCTGCAGGG | + |
Preference number: 5 (lower is better) Translates to: CPPQLAWPEPALQQG*LPGSGSKKEVSPAG Trigger: CCCTGCAGGAGAAACTTCTTTCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | CAATCTTCCCAGGAGTCAAGTGAGGGAGCAGGGCTGGCATGGTCATGTGCCCTCTATGTCCACCGCAGCTaGCTTGGCCCGAGCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: QSSQESSEGAGLAWSCALYVHRS*LGPSLL Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATA...GAGGGCACATGACCATGCCAGCCCTGCTCCCTCACTTGACTCCTGGGAAGATTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS GCA 90 bp | CACCGCAGCTTGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGAAAGAAGTTTCTCCTGCAGGGACAT | + |
Preference number: 5 (lower is better) Translates to: HRSLLGPSLLSSRDG*PVPVVRKKFLLQGH Trigger: ATGTCCCTGCAGGAGAAACTTCTTTCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 90 bp | GGCTGCCACTCAAGTACATGTCCCGAAGTGGCATATCAGGCAGCTTaGCCCGCAGGAAGCTCCGGAGCTCAGCACATATGTCCACCGCAG | + |
Preference number: 5 (lower is better) Translates to: GCHSSTCPEVAYQAA*PAGSSGAQHICPPQ Trigger: CTGCGGTGGACATATGTGCTGAGCTCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGCCACTTCGGGACATGTACTTGAGTGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS GCA 90 bp | CACCGCAGCTTGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGAAAGAAGTTTCTCCTGTGTCAAAGG | + |
Preference number: 5 (lower is better) Translates to: HRSLLGPSLLSSRDG*PVPVVRKKFLLCQR Trigger: CCTTTGACACAGGAGAAACTTCTTTCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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CDS CCA 90 bp | TTCTCCTGCAGGGACATGCGGAGTCGTGACTTCTTCAAGTCTACCTaGCCCCTCCTGGCCAATGGTTTGGGCCGGGGTGGGCAGAATGTA | + |
Preference number: 5 (lower is better) Translates to: FSCRDMRSRDFFKST*PLLANGLGRGGQNV Trigger: TACATTCTGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 90 bp | TGTCCACCGCAGCTTGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGTAAGAAAGAAGTTTCTCCTGTGTCA | + |
Preference number: 5 (lower is better) Translates to: CPPQLAWPEPALQQG*LPGSGSKKEVSPVS Trigger: TGACACAGGAGAAACTTCTTTCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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CDS GCA 90 bp | GCACCAGCCGGGCATTGGAGAGCACAAAATCGATGGCCGTACCAATaGCATTGTCATCCTTCTTCCCTTTGCGCTCACCAGCGCCTGCCA | + |
Preference number: 5 (lower is better) Translates to: APAGHWRAQNRWPYQ*HCHPSSLCAHQRLP Trigger: TGGCAGGCGCTGGTGAGCGCAAAGGGAAGAAGGATGACAATGGCATTGGTACGGCCATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS CCA 90 bp | GGGACATGCGGAGTCGTGACTTCTTCAAGTCTACCTGGCCCCTCCTaGCCAATGGTTTGGGCCGGGGTGGGCAGAATGTATCTGTGTCAA | + |
Preference number: 5 (lower is better) Translates to: GTCGVVTSSSLPGPS*PMVWAGVGRMYLCQ Trigger: TTGACACAGATACATTCTGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 90 bp | CTGCAGATCATCATAGAGGCTGCCACTCAAGTACATGTCCCGAAGTaGCATATCAGGCAGCTTGGCCCGCAGGAAGCTCCGGAGCTCAGC | + |
Preference number: 5 (lower is better) Translates to: LQIIIEAATQVHVPK*HIRQLGPQEAPELS Trigger: GCTGAGCTCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGCCACTTCGGGACATGTACTTGAGTGGCAGCCTCTATGATGATCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGTCCACCGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA | + |
Preference number: 5 (lower is better) Translates to: IEKRANKRPRGRTGHSRQSTAAC*ARACSP Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGA...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CAA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCGGCATATCAGGCAGCTaGGCCCGCAGGAAGCTCCGG | + |
Preference number: 5 (lower is better) Translates to: GKPQGRQSHQHEVTRTITGISGS*ARRKLR Trigger: CCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGCC...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CAA 90 bp | TGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTTGGCATATCAGGCAGCTaGGCCCGCAGGAAGCTCCGG | + |
Preference number: 5 (lower is better) Translates to: WHSQLGLSTKREAGQSIFGISGS*ARRKLR Trigger: CCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGCC...AAAGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS GCA 90 bp | CTGCCCGGTTCCGGTAGTAAGAAAGAAGTTTCTCCTGCAGGGACATaGGGAGTCGTGACTTCTTCAAGTCTACCTGGCCCCTCCTGGCCA | + |
Preference number: 5 (lower is better) Translates to: LPGSGSKKEVSPAGT*GVVTSSSLPGPSWP Trigger: TGGCCAGGAGGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTTCTTACTACCGGAACCGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 90 bp | CACCCACACCCAGCACCAGCCGGGCATTGGAGAGCACAAAATCGATaGCCGTACCAATGCCATTGTCATCCTTCTTCCCTTTGCGCTCAC | + |
Preference number: 5 (lower is better) Translates to: HPHPAPAGHWRAQNR*PYQCHCHPSSLCAH Trigger: GTGAGCGCAAAGGGAAGAAGGATGACAATGGCATTGGTACGGCCATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGCTGGGTGTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCTATGTCCACCGCAGCTaGCTTGGCCCGAGCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: GKPQGRQSHQHEVTRTITYVHRS*LGPSLL Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATA...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CAA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGGCATATCAGGCAGCTaGGCCCGCAGGAAGCTCCGG | + |
Preference number: 5 (lower is better) Translates to: RREQTRGQGAEPDIADRKGISGS*ARRKLR Trigger: CCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGCC...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS CCA 90 bp | GTCGTGACTTCTTCAAGTCTACCTGGCCCCTCCTGGCCAATGGTTTaGGCCGGGGTGGGCAGAATGTATCTGTGTCAAAGGCAGAAGAGT | + |
Preference number: 5 (lower is better) Translates to: VVTSSSLPGPSWPMV*AGVGRMYLCQRQKS Trigger: ACTCTTCTGCCTTTGACACAGATACATTCTGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAAGTCACGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCTCATCCTTCTTCCCTTaGCGCTCACCAGCGCCTGCC | + |
Preference number: 5 (lower is better) Translates to: GKPQGRQSHQHEVTRTITSSFFP*RSPAPA Trigger: GGCAGGCGCTGGTGAGCGCAAAGGGAAGAAGGATGA...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CAA 90 bp | GGCAGAGGCTCTTTGCCAGCCTCACCCTGGAAACCTAAATACTGTCTTATTCCTTATGTCCACCGCAGCTaGCTTGGCCCGAGCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: GRGSLPASPWKPKYCLIPYVHRS*LGPSLL Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATA...AGGAATAAGACAGTATTTAGGTTTCCAGGGTGAGGCTGGCAAAGAGCCTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 |
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CDS-3UTR CAA 90 bp | GGGAAACCGCAGGGACGTCAATCTCATCAGCATGAAGTGACCAGGACAATTACCCCTATGGCTGGCCAGTaGATGGAGCCTGCCACCACT | + |
Preference number: 5 (lower is better) Translates to: GKPQGRQSHQHEVTRTITPMAGQ*MEPATT Trigger: AGTGGTGGCAGGCTCCATCAACTGGCCAGCCATAGG...GGTAATTGTCCTGGTCACTTCATGCTGATGAGATTGACGTCCCTGCGGTTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS TCA 90 bp | CCGGTAGTAAGAAAGAAGTTTCTCCTGCAGGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTGGCCCCTCCTGGCCAATGGTTTGGG | + |
Preference number: 5 (lower is better) Translates to: PVVRKKFLLQGHAES*LLQVYLAPPGQWFG Trigger: CCCAAACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTTCTTACTACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGGCCGTACCAATGCCATaGTCATCCTTCTTCCCTTTG | + |
Preference number: 5 (lower is better) Translates to: APRDPVRHQPRSQVFLTEAVPMP*SSFFPL Trigger: CAAAGGGAAGAAGGATGACAATGGCATTGGTACGGC...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CAA 90 bp | CAGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCAAGGGGGACAATGAGTaGGATATGGTCAGCCGTCAC | + |
Preference number: 5 (lower is better) Translates to: QWHSQLGLSTKREAGQSIKGDNE*DMVSRH Trigger: GTGACGGCTGACCATATCCAACTCATTGTCCCCCTT...GATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS CCA 90 bp | GTAGTAAGAAAGAAGTTTCTCCTGTGTCAAAGGCAGAAGAGTCTGTaGGAAGGGTCTGCAGGGACCGGCTCAGGCCTGCCTTCATGTCCT | + |
Preference number: 5 (lower is better) Translates to: VVRKKFLLCQRQKSL*EGSAGTGSGLPSCP Trigger: AGGACATGAAGGCAGGCCTGAGCCGGTCCCTGCAGACCCTTCCCACAGACTCTTCTGCCTTTGACACAGGAGAAACTTCTTTCTTACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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CDS-3UTR CAA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGAAGCACCAGCCGGGCATaGGAGAGCACAAAATCGATG | + |
Preference number: 5 (lower is better) Translates to: EQTRGQGAEPDIADRKARSTSRA*ESTKSM Trigger: CATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGCT...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CAA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGAGCACCAGCCGGGCATaGGAGAGCACAAAATCGATG | + |
Preference number: 5 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRSTSRA*ESTKSM Trigger: CATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGCT...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 |
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CDS-3UTR CAA 90 bp | TGGTTTTGCAGCATTCTACCAGCTCTCCCTCCAACAGGCAGCAGCAAGAACCTTAGCACCAGCCGGGCATaGGAGAGCACAAAATCGATG | + |
Preference number: 5 (lower is better) Translates to: WFCSILPALPPTGSSKNLSTSRA*ESTKSM Trigger: CATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGCT...AAGGTTCTTGCTGCTGCCTGTTGGAGGGAGAGCTGGTAGAATGCTGCAAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | GCACCTAGGGACCCTGTGAGGCACCAACCACGTAGCCAAGTGTTTCTAACGGAGGACTTGCATATGGCCTaGAGGATCTTGAGGCAAAGA | + |
Preference number: 5 (lower is better) Translates to: APRDPVRHQPRSQVFLTEDLHMA*RILRQR Trigger: TCTTTGCCTCAAGATCCTCAAGGCCATATGCAAGTC...CTCCGTTAGAAACACTTGGCTACGTGGTTGGTGCCTCACAGGGTCCCTAGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CAA 90 bp | ATAGAGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAGTGGAGGATGACGTaGGTTAGCTGGCTGGCAGTG | + |
Preference number: 5 (lower is better) Translates to: IEKRANKRPRGRTGHSRQKWRMT*VSWLAV Trigger: CACTGCCAGCCAGCTAACCAACGTCATCCTCCACTT...CTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CAA 90 bp | TGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTTAAGTGGAGGATGACGTaGGTTAGCTGGCTGGCAGTG | + |
Preference number: 5 (lower is better) Translates to: WHSQLGLSTKREAGQSIFKWRMT*VSWLAV Trigger: CACTGCCAGCCAGCTAACCAACGTCATCCTCCACTT...AAAGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | TGGCCATATATAGCAATCTTAGCAGCAAGGTGGGAAGCCCCAACTCTTTTCTGTTCATCCTTCTTCCCTTaGCGCTCACCAGCGCCTGCC | + |
Preference number: 5 (lower is better) Translates to: WPYIAILAARWEAPTLFCSSFFP*RSPAPA Trigger: GGCAGGCGCTGGTGAGCGCAAAGGGAAGAAGGATGA...ACAGAAAAGAGTTGGGGCTTCCCACCTTGCTGCTAAGATTGCTATATATGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | GGAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCCACCGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA | + |
Preference number: 5 (lower is better) Translates to: GISSEMAAEESYNTSDRKSTAAC*ARACSP Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGA...TTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | TCTAAGAGGTTCCTGCTTATAAGATGGCCAAGTCATGATCTTGGATTGCAAAGCTCCACCGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA | + |
Preference number: 5 (lower is better) Translates to: SKRFLLIRWPSHDLGLQSSTAAC*ARACSP Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGA...GCTTTGCAATCCAAGATCATGACTTGGCCATCTTATAAGCAGGAACCTCTTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGAAGGGGGACAATGAGTaGGATATGGTCAGCCGTCAC | + |
Preference number: 5 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRKGDNE*DMVSRH Trigger: GTGACGGCTGACCATATCCAACTCATTGTCCCCCTT...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CAA 90 bp | AGAAGAGAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAATGTCTGCCACTGTCTTaGGGGAGAGGTAGCCACCTA | + |
Preference number: 5 (lower is better) Translates to: RREQTRGQGAEPDIADRKCLPLS*GRGSHL Trigger: TAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGACA...TTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTCTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CAA 90 bp | CAGCCTAGAGTAAGGCGGCAAGTGGGGAGCACAGTGCTTGGTTACAAAAATAGGAGAGCTGGAGTGGACTaGCATATGGCCTTGAGGATC | + |
Preference number: 5 (lower is better) Translates to: QPRVRRQVGSTVLGYKNRRAGVD*HMALRI Trigger: GATCCTCAAGGCCATATGCAAGTCCACTCCAGCTCT...CCTATTTTTGTAACCAAGCACTGTGCTCCCCACTTGCCGCCTTACTCTAGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CAA 90 bp | ATTCCAAATGTCCCTTCCCCCACCCATAGGATGATTACATGGCCATATATAGCATCATCCTTCTTCCCTTaGCGCTCACCAGCGCCTGCC | + |
Preference number: 5 (lower is better) Translates to: IPNVPSPTHRMITWPYIASSFFP*RSPAPA Trigger: GGCAGGCGCTGGTGAGCGCAAAGGGAAGAAGGATGA...TGCTATATATGGCCATGTAATCATCCTATGGGTGGGGGAAGGGACATTTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | TGGGAGAACACAATACTAGAATGGCAAATCAGAACCAGAGTTACTGTCAGCCTCCCTATGGCTGGCCAGTaGATGGAGCCTGCCACCACT | + |
Preference number: 5 (lower is better) Translates to: WENTILEWQIRTRVTVSLPMAGQ*MEPATT Trigger: AGTGGTGGCAGGCTCCATCAACTGGCCAGCCATAGG...GAGGCTGACAGTAACTCTGGTTCTGATTTGCCATTCTAGTATTGTGTTCTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | AGTGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTGACTTGCATATGGCCTaGAGGATCTTGAGGCAAAGA | + |
Preference number: 5 (lower is better) Translates to: SGTANWVFQQRGKQGRASDLHMA*RILRQR Trigger: TCTTTGCCTCAAGATCCTCAAGGCCATATGCAAGTC...AGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | TACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATGACATTTCCACCGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA | + |
Preference number: 5 (lower is better) Translates to: YCQPLVMNGRKRTHRNDISTAAC*ARACSP Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGA...AATGTCATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | TCACCAGTTCAATTTCTCTCCTTCAAGGAGAAGGAGGATAAAGGTTCTCTGGGCTGTCTGCCACTGTCTTaGGGGAGAGGTAGCCACCTA | + |
Preference number: 5 (lower is better) Translates to: SPVQFLSFKEKEDKGSLGCLPLS*GRGSHL Trigger: TAGGTGGCTACCTCTCCCCAAAGACAGTGGCAGACA...GCCCAGAGAACCTTTATCCTCCTTCTCCTTGAAGGAGAGAAATTGAACTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | TGGCACAGCCAACTGGGTCTTTCAACAAAGAGGGAAGCAGGGCAGAGCATCTTTCAACTCGTCTATTTCTaGAGGGGTGAGCTCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: WHSQLGLSTKREAGQSIFQLVYF*RGELCK Trigger: TTTGCAGAGCTCACCCCTCAAGAAATAGACGAGTTG...AAAGATGCTCTGCCCTGCTTCCCTCTTTGTTGAAAGACCCAGTTGGCTGTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | GAGCAAACAAGAGGCCAAGGGGCAGAACCGGACATAGCAGACAGAAAAGCAAGACAACTCGTCTATTTCTaGAGGGGTGAGCTCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: EQTRGQGAEPDIADRKARQLVYF*RGELCK Trigger: TTTGCAGAGCTCACCCCTCAAGAAATAGACGAGTTG...TCTTGCTTTTCTGTCTGCTATGTCCGGTTCTGCCCCTTGGCCTCTTGTTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 |
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CDS-3UTR CAA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATTCATCCTTCTTCCCTTaGCGCTCACCAGCGCCTGCC | + |
Preference number: 5 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNSSFFP*RSPAPA Trigger: GGCAGGCGCTGGTGAGCGCAAAGGGAAGAAGGATGA...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | CAGAGTTACTGTCAGCCTCTTGTCATGAACGGAAGAAAAAGGACACATAGAAATCCTATGGCTGGCCAGTaGATGGAGCCTGCCACCACT | + |
Preference number: 5 (lower is better) Translates to: QSYCQPLVMNGRKRTHRNPMAGQ*MEPATT Trigger: AGTGGTGGCAGGCTCCATCAACTGGCCAGCCATAGG...ATTTCTATGTGTCCTTTTTCTTCCGTTCATGACAAGAGGCTGACAGTAACTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | TGGGAGAACACAATACTAGAATGGCAAATCAGAACCAGAGTTACTGTCAGCCTCAAGTGGAGGATGACGTaGGTTAGCTGGCTGGCAGTG | + |
Preference number: 5 (lower is better) Translates to: WENTILEWQIRTRVTVSLKWRMT*VSWLAV Trigger: CACTGCCAGCCAGCTAACCAACGTCATCCTCCACTT...GAGGCTGACAGTAACTCTGGTTCTGATTTGCCATTCTAGTATTGTGTTCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | TCTAAGAGGTTCCTGCTTATAAGATGGCCAAGTCATGATCTTGGATTGCAAAGCAGCACCAGCCGGGCATaGGAGAGCACAAAATCGATG | + |
Preference number: 5 (lower is better) Translates to: SKRFLLIRWPSHDLGLQSSTSRA*ESTKSM Trigger: CATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGCT...GCTTTGCAATCCAAGATCATGACTTGGCCATCTTATAAGCAGGAACCTCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | AGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCTAACTCCTCTCAGAGCTGGAGTGGACTaGCATATGGCCTTGAGGATC | + |
Preference number: 5 (lower is better) Translates to: RWQLRSLIILLTGNLTPLRAGVD*HMALRI Trigger: GATCCTCAAGGCCATATGCAAGTCCACTCCAGCTCT...GAGAGGAGTTAGATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | CATAGAAATGACATTCCAAATGTCCCTTCCCCCACCCATAGGATGATTACATGGGACTTGCATATGGCCTaGAGGATCTTGAGGCAAAGA | + |
Preference number: 5 (lower is better) Translates to: HRNDIPNVPSPTHRMITWDLHMA*RILRQR Trigger: TCTTTGCCTCAAGATCCTCAAGGCCATATGCAAGTC...CCATGTAATCATCCTATGGGTGGGGGAAGGGACATTTGGAATGTCATTTCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | CAGGAGGGCATGTTTCAGTTAAGGTTCTTGGCTTTATCACGTTTCTCATACTATAGAGCTGGAGTGGACTaGCATATGGCCTTGAGGATC | + |
Preference number: 5 (lower is better) Translates to: QEGMFQLRFLALSRFSYYRAGVD*HMALRI Trigger: GATCCTCAAGGCCATATGCAAGTCCACTCCAGCTCT...ATAGTATGAGAAACGTGATAAAGCCAAGAACCTTAACTGAAACATGCCCTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS-3UTR CAA 90 bp | GAATCAGTTCAGAGATGGCAGCTGAGGAGTCTTATAATACTTCTGACAGGAAATCAACTCGTCTATTTCTaGAGGGGTGAGCTCTGCAAA | + |
Preference number: 5 (lower is better) Translates to: ESVQRWQLRSLIILLTGNQLVYF*RGELCK Trigger: TTTGCAGAGCTCACCCCTCAAGAAATAGACGAGTTG...ATTTCCTGTCAGAAGTATTATAAGACTCCTCAGCTGCCATCTCTGAACTGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023048.12 ENSMUST00000229138.2 |
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CDS CAA 90 bp | CGCAGGAAGCTCCGGAGCTCAGCACATATGTCCACCGCAGCTTGCTaGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTGCCCGGTTCCGG | + |
Preference number: 6 (lower is better) Translates to: RRKLRSSAHMSTAAC*ARACSPAGMAARFR Trigger: CCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATATGTGCTGAGCTCCGGAGCTTCCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CAA 72 bp | CTCCGGAGCTCAGCACATATGTCCACCGCAGCTTGCTaGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTGCC | + |
Preference number: 6 (lower is better) Translates to: LRSSAHMSTAAC*ARACSPAGMAA Trigger: GGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATATGTGCTGAGCTCCGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CAA 72 bp | GAAGCTCCGGAGCTCAGCACATATGTCCACCGCAGCTaGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGC | + |
Preference number: 6 (lower is better) Translates to: EAPELSTYVHRS*LGPSLLSSRDG Trigger: GCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATATGTGCTGAGCTCCGGAGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS GCA 72 bp | AAGCTCCGGAGCTCAGCACATATGTCCACCGCAGCTTaGTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGCT | + |
Preference number: 6 (lower is better) Translates to: KLRSSAHMSTAA*LARACSPAGMA Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCGGTGGACATATGTGCTGAGCTCCGGAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CAA 90 bp | GTGGGAAGGGTCTGCAGGGACCGGCTCAGGCCTGCCTTCATGTCCTaGTTCAATAGGCGAGGAGAGCCCATCCAGTTTGGCTCCTCCCAG | + |
Preference number: 6 (lower is better) Translates to: VGRVCRDRLRPAFMS*FNRRGEPIQFGSSQ Trigger: CTGGGAGGAGCCAAACTGGATGGGCTCTCCTCGCCTATTGAACAAGGACATGAAGGCAGGCCTGAGCCGGTCCCTGCAGACCCTTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS CAA 72 bp | GTCTGCAGGGACCGGCTCAGGCCTGCCTTCATGTCCTaGTTCAATAGGCGAGGAGAGCCCATCCAGTTTGGC | + |
Preference number: 6 (lower is better) Translates to: VCRDRLRPAFMS*FNRRGEPIQFG Trigger: GCCAAACTGGATGGGCTCTCCTCGCCTATTGAACAAGGACATGAAGGCAGGCCTGAGCCGGTCCCTGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS CAA 90 bp | AGGCTGCCACTCAAGTACATGTCCCGAAGTGGCATATCAGGCAGCTaGGCCCGCAGGAAGCTCCGGAGCTCAGCACATATGTCCACCGCA | + |
Preference number: 6 (lower is better) Translates to: RLPLKYMSRSGISGS*ARRKLRSSAHMSTA Trigger: TGCGGTGGACATATGTGCTGAGCTCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGCCACTTCGGGACATGTACTTGAGTGGCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 72 bp | GGCAGAATGTATCTGTGTCAAAGGCAGAAGAGTCTGTaGGAAGGGTCTGCAGGGACCGGCTCAGGCCTGCCT | + |
Preference number: 6 (lower is better) Translates to: GRMYLCQRQKSL*EGSAGTGSGLP Trigger: AGGCAGGCCTGAGCCGGTCCCTGCAGACCCTTCCCACAGACTCTTCTGCCTTTGACACAGATACATTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 72 bp | TACCTGGCCCCTCCTGGCCAATGGTTTGGGCCGGGGTaGGCAGAATGTATCTGTGTCAAAGGCAGAAGAGTC | + |
Preference number: 6 (lower is better) Translates to: YLAPPGQWFGPG*AECICVKGRRV Trigger: GACTCTTCTGCCTTTGACACAGATACATTCTGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 72 bp | CAGCTTGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGTAAGAAAGAAGTTTCT | + |
Preference number: 6 (lower is better) Translates to: QLAWPEPALQQG*LPGSGSKKEVS Trigger: AGAAACTTCTTTCTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS GCA 72 bp | AGGGGCACTGATTGCCCGGTCATACATCCGCTTAACTaGCAGTGTGGCAATGCCCAACATAGCTGCTCCACC | + |
Preference number: 6 (lower is better) Translates to: RGTDCPVIHPLN*QCGNAQHSCST Trigger: GGTGGAGCAGCTATGTTGGGCATTGCCACACTGGCAGTTAAGCGGATGTATGACCGGGCAATCAGTGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS CCA 72 bp | TCTTCAAGTCTACCTGGCCCCTCCTGGCCAATGGTTTaGGCCGGGGTGGGCAGAATGTATCTGTGTCAAAGG | + |
Preference number: 6 (lower is better) Translates to: SSSLPGPSWPMV*AGVGRMYLCQR Trigger: CCTTTGACACAGATACATTCTGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 72 bp | AAGAAGTTTCTCCTGTGTCAAAGGCAGAAGAGTCTGTaGGAAGGGTCTGCAGGGACCGGCTCAGGCCTGCCT | + |
Preference number: 6 (lower is better) Translates to: KKFLLCQRQKSL*EGSAGTGSGLP Trigger: AGGCAGGCCTGAGCCGGTCCCTGCAGACCCTTCCCACAGACTCTTCTGCCTTTGACACAGGAGAAACTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228788.3 |
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CDS CAA 72 bp | CTCAAGTACATGTCCCGAAGTGGCATATCAGGCAGCTaGGCCCGCAGGAAGCTCCGGAGCTCAGCACATATG | + |
Preference number: 6 (lower is better) Translates to: LKYMSRSGISGS*ARRKLRSSAHM Trigger: CATATGTGCTGAGCTCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGCCACTTCGGGACATGTACTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CAA 90 bp | AGTCGTGACTTCTTCAAGTCTACCTGGCCCCTCCTGGCCAATGGTTaGGGCCGGGGTGGGCAGAATGTATCTGTGTCAAAGGCAGAAGAG | + |
Preference number: 6 (lower is better) Translates to: SRDFFKSTWPLLANG*GRGGQNVSVSKAEE Trigger: CTCTTCTGCCTTTGACACAGATACATTCTGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAAGTCACGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 72 bp | TCAAGTACATGTCCCGAAGTGGCATATCAGGCAGCTTaGCCCGCAGGAAGCTCCGGAGCTCAGCACATATGT | + |
Preference number: 6 (lower is better) Translates to: SSTCPEVAYQAA*PAGSSGAQHIC Trigger: ACATATGTGCTGAGCTCCGGAGCTTCCTGCGGGCCAAGCTGCCTGATATGCCACTTCGGGACATGTACTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CAA 72 bp | TTCTTCAAGTCTACCTGGCCCCTCCTGGCCAATGGTTaGGGCCGGGGTGGGCAGAATGTATCTGTGTCAAAG | + |
Preference number: 6 (lower is better) Translates to: FFKSTWPLLANG*GRGGQNVSVSK Trigger: CTTTGACACAGATACATTCTGCCCACCCCGGCCCAAACCATTGGCCAGGAGGGGCCAGGTAGACTTGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS TCA 72 bp | AGAAAGAAGTTTCTCCTGCAGGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTGGCCCCTCCTGGCCAA | + |
Preference number: 6 (lower is better) Translates to: RKKFLLQGHAES*LLQVYLAPPGQ Trigger: TTGGCCAGGAGGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CCA 72 bp | CCAGCACCAGCCGGGCATTGGAGAGCACAAAATCGATaGCCGTACCAATGCCATTGTCATCCTTCTTCCCTT | + |
Preference number: 6 (lower is better) Translates to: PAPAGHWRAQNR*PYQCHCHPSSL Trigger: AAGGGAAGAAGGATGACAATGGCATTGGTACGGCCATCGATTTTGTGCTCTCCAATGCCCGGCTGGTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 ENSMUST00000229138.2 |
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CDS GCA 72 bp | TCCGGTAGTAAGAAAGAAGTTTCTCCTGCAGGGACATaGGGAGTCGTGACTTCTTCAAGTCTACCTGGCCCC | + |
Preference number: 6 (lower is better) Translates to: SGSKKEVSPAGT*GVVTSSSLPGP Trigger: GGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTTCTTACTACCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000229138.2 |
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CDS CAA 72 bp | TTGGAGAGCACAAAATCGATGGCCGTACCAATGCCATaGTCATCCTTCTTCCCTTTGCGCTCACCAGCGCCT | + |
Preference number: 6 (lower is better) Translates to: LESTKSMAVPMP*SSFFPLRSPAP Trigger: AGGCGCTGGTGAGCGCAAAGGGAAGAAGGATGACAATGGCATTGGTACGGCCATCGATTTTGTGCTCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023048.12 ENSMUST00000166030.2 ENSMUST00000228788.3 ENSMUST00000229138.2 |