Pregenerated sensors for MIDN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035621Ensembl transcript IDs: ENSMUST00000042057.12, ENSMUST00000099492.10, ENSMUST00000144526.2, ENSMUST00000146516.8, ENSMUST00000151202.2, ENSMUST00000153477.8
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGGGTGGGTGGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTaGTACATATTTGGAGCTGGAGAGGTGGGAGGGAAGGGCCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: AGVGGFLRLGHPGTD*YIFGAGEVGGKGPV Trigger: AACAGGGCCCTTCCCTCCCACCTCTCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCCACCCACCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR GCA 90 bp | CTGCTACATATTTGGAGCTGGAGAGGTGGGAGGGAAGGGCCCTGTTaGAGAGGCCGTGACCATGGTAAGGGAATAGAGTGGGCATGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LLHIWSWRGGREGPC*RGRDHGKGIEWACD Trigger: GTCACATGCCCACTCTATTCCCTTACCATGGTCACGGCCTCTGCAACAGGGCCCTTCCCTCCCACCTCTCCAGCTCCAAATATGTAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR TCA 90 bp | GCCCGTCATTGTAGCACTTGGGAGACTGAGGCAGGAGGAAGGCTGTaGGTTAAGTGGGCTTCGTGGACAAAGGTATCCTCTGTGAGTCTA | + |
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Preference number: 1 (lower is better) Translates to: ARHCSTWETEAGGRL*VKWASWTKVSSVSL Trigger: TAGACTCACAGAGGATACCTTTGTCCACGAAGCCCACTTAACTCACAGCCTTCCTCCTGCCTCAGTCTCCCAAGTGCTACAATGACGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR GCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCTCGGAGGTGACCTCGTaGCCCCCAGAGCTGGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: RALPSVELMQAQSRTPLPSEVTS*PPELGR Trigger: GCGGCCCAGCTCTGGGGGGCACGAGGTCACCTCCGA...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR GCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCTCGGAGGTGACCTCGTaGCCCCCAGAGCTGGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPSEVTS*PPELGR Trigger: GCGGCCCAGCTCTGGGGGGCACGAGGTCACCTCCGA...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGCGGAAGGGCTGGGGTaGGTGGCTTCCTCCGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPAEGLG*VASSVW Trigger: CCAGACGGAGGAAGCCACCCACCCCAGCCCTTCCGC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGCCAAGTCTGCAGACTaGGGTGGGGGTGGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KRTMGGLLPEASNLSPVDAKSAD*GGGGGG Trigger: CCCACCCCCACCCCCACCCCAGTCTGCAGACTTGGC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCGGGATCCAGCTGGCCTaGAACAGTGGCCAAGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RALPSVELMQAQSRTPLPGIQLA*NSGQVC Trigger: GCAGACTTGGCCACTGTTCCAGGCCAGCTGGATCCC...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGTGGCAGGCTGGGCCTaGAGAAGAGGTACAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPVAGWA*RRGTGV Trigger: CACCCCTGTACCTCTTCTCCAGGCCCAGCCTGCCAC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCTTGGAGCTGGAGAGGTaGGAGGGAAGGGCCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPLELER*EGRALL Trigger: CAACAGGGCCCTTCCCTCCCACCTCTCCAGCTCCAA...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACTTGGAGCTGGAGAGGTaGGAGGGAAGGGCCCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: KRTMGGLLPEASNLSPVDLELER*EGRALL Trigger: CAACAGGGCCCTTCCCTCCCACCTCTCCAGCTCCAA...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGGTTATGGAAGGGGGTaGGGAGAGCTAGGCAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: KRTMGGLLPEASNLSPVDGYGRG*GELGRA Trigger: CGCTCTGCCTAGCTCTCCCCACCCCCTTCCATAACC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAGCTGGCCTGGAACAGTaGCCAAGTCTGCAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: RELWVGSCLRPPISAQWTAGLEQ*PSLQTG Trigger: CCCAGTCTGCAGACTTGGCCACTGTTCCAGGCCAGC...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAGGGATCCAGCTGGCCTaGAACAGTGGCCAAGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RELWVGSCLRPPISAQWTGIQLA*NSGQVC Trigger: GCAGACTTGGCCACTGTTCCAGGCCAGCTGGATCCC...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACATCTTCCCATCCCCAGTaGCAGGCTGGGCCTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: RELWVGSCLRPPISAQWTSSHPQ*QAGPGE Trigger: TTCTCCAGGCCCAGCCTGCCACTGGGGATGGGAAGA...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGCATGTGACCAGGGATaGGGGGTAGACAATCGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KRTMGGLLPEASNLSPVDACDQG*GVDNRG Trigger: TCCCCGATTGTCTACCCCGCATCCCTGGTCACATGC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCCGTCATTGTAGCACTTaGGAGACTGAGGCAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPRHCST*ETEAGG Trigger: TCCTCCTGCCTCAGTCTCCCAAGTGCTACAATGACG...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACACGTCATTGTAGCACTTaGGAGACTGAGGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RELWVGSCLRPPISAQWTRHCST*ETEAGG Trigger: TCCTCCTGCCTCAGTCTCCCAAGTGCTACAATGACG...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGAGGTAAGGGAATAGAGTaGGCATGTGACCAGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGGKGIE*ACDQGC Trigger: GCATCCCTGGTCACATGCCCACTCTATTCCCTTACC...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAAGACTGCTACATATTTaGAGCTGGAGAGGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RELWVGSCLRPPISAQWTRLLHI*SWRGGR Trigger: CCTCCCACCTCTCCAGCTCCAAATATGTAGCAGTCT...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAGGCAGGGGATCCAGCTaGCCTGGAACAGTGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: KHTVGEETRTGSQPRTKEGRGSS*PGTVAK Trigger: CTTGGCCACTGTTCCAGGCCAGCTGGATCCCCTGCC...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAGGTTTAAACACACAGTaGGGGAAGAGACAAGGACGG | + |
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Preference number: 2 (lower is better) Translates to: RELWVGSCLRPPISAQWTGLNTQ*GKRQGR Trigger: CCGTCCTTGTCTCTTCCCCCACTGTGTGTTTAAACC...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGGTTTAAACACACAGTaGGGGAAGAGACAAGGACGG | + |
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Preference number: 2 (lower is better) Translates to: KRTMGGLLPEASNLSPVDGLNTQ*GKRQGR Trigger: CCGTCCTTGTCTCTTCCCCCACTGTGTGTTTAAACC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAGGGTGGGACTCATCCTaGGGTCCCCAACCCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KHTVGEETRTGSQPRTKEGWDSS*GPQPSS Trigger: AGATGAGGGTTGGGGACCCCAGGATGAGTCCCACCC...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAGCTGGCCTGGAACAGTaGCCAAGTCTGCAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: KHTVGEETRTGSQPRTKEAGLEQ*PSLQTG Trigger: CCCAGTCTGCAGACTTGGCCACTGTTCCAGGCCAGC...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR TCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAGCAGGAGGAAGGCTGTaGGTTAAGTGGGCTTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: KHTVGEETRTGSQPRTKEAGGRL*VKWASW Trigger: CCACGAAGCCCACTTAACTCACAGCCTTCCTCCTGC...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR GCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAGCATGTGACCAGGGATaGGGGGTAGACAATCGGGGA | + |
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Preference number: 2 (lower is better) Translates to: KHTVGEETRTGSQPRTKEACDQG*GVDNRG Trigger: TCCCCGATTGTCTACCCCGCATCCCTGGTCACATGC...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACACAGAGAACAGCCACTTaGTTCAGCTTTTTCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: RELWVGSCLRPPISAQWTQRTAT*FSFFHP Trigger: TGGATGGAAAAAGCTGAAGCAAGTGGCTGTTCTCTG...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR CAA 90 bp | TCAGAGAACAGCCACTTGCTTCAGCTTTTTCCATCCAACGAGCTTTaGTGGCAAGAGCAAGGCCAGCCAAGCATAGTGGCAAAGGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: SENSHLLQLFPSNEL*WQEQGQPSIVAKAR Trigger: ACGGGCCTTTGCCACTATGCTTGGCTGGCCTTGCTCTTGCCACAAAAGCTCGTTGGATGGAAAAAGCTGAAGCAAGTGGCTGTTCTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAATCCCCCAAGCTCCATTaGGAAAGAAGGTTAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KHTVGEETRTGSQPRTKESPKLH*ERRLRK Trigger: TTTCCTTAACCTTCTTTCCCAATGGAGCTTGGGGGA...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR CCA 72 bp | GAGGAAAGAGACGGCGAGGCCAGTGTCCAGAGAGGATaGCCGCCTCGCGAGGAAAAGAGGCATCCCCCGCCT | + |
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Preference number: 3 (lower is better) Translates to: EERDGEASVQRG*PPREEKRHPPP Trigger: AGGCGGGGGATGCCTCTTTTCCTCGCGAGGCGGCCATCCTCTCTGGACACTGGCCTCGCCGTCTCTTTCCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR GCA 72 bp | GGTGGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTaGTACATATTTGGAGCTGGAGAGGTGGGAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GGFLRLGHPGTD*YIFGAGEVGGK Trigger: CTTCCCTCCCACCTCTCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CAA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCCCATCCAACGAGCTTTaGTGGCAAGAGCAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPPSNEL*WQEQGQ Trigger: CTGGCCTTGCTCTTGCCACAAAAGCTCGTTGGATGG...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR TCA 72 bp | GAGTTAAGTGGGCTTCGTGGACAAAGGTATCCTCTGTaGGTCTATCAGCTTTCCGGGGTGGGAGGGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: ELSGLRGQRYPL*VYQLSGVGGAG Trigger: CCCTGCCCCTCCCACCCCGGAAAGCTGATAGACTCACAGAGGATACCTTTGTCCACGAAGCCCACTTAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CAA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGTCCCCCAAGCTCCATaGGGAAAGAAGGTTAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPVPQAP*GKKVKE Trigger: TTCCTTAACCTTCTTTCCCAATGGAGCTTGGGGGAC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CAA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCTCAGAGAACAGCCACTaGCTTCAGCTTTTTCCATCC | + |
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Preference number: 3 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPSENSH*LQLFPS Trigger: GGATGGAAAAAGCTGAAGCAAGTGGCTGTTCTCTGA...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR TCA 72 bp | TGTAGCACTTGGGAGACTGAGGCAGGAGGAAGGCTGTaGGTTAAGTGGGCTTCGTGGACAAAGGTATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: CSTWETEAGGRL*VKWASWTKVSS Trigger: AGAGGATACCTTTGTCCACGAAGCCCACTTAACTCACAGCCTTCCTCCTGCCTCAGTCTCCCAAGTGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CAA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAACCATCCAACGAGCTTTaGTGGCAAGAGCAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: KHTVGEETRTGSQPRTKEPSNEL*WQEQGQ Trigger: CTGGCCTTGCTCTTGCCACAAAAGCTCGTTGGATGG...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR-3UTR CAA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAACAGACTGCTACATATTaGGAGCTGGAGAGGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KHTVGEETRTGSQPRTKEQTATY*ELERWE Trigger: CTCCCACCTCTCCAGCTCCAAATATGTAGCAGTCTG...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| 3UTR TCA 72 bp | CAACCCTCATCTGTAAAGTGCTTGGAGAATCTACATTaGGTTAAAAACCTGAATTGGGTTATGGAAGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: QPSSVKCLENLH*VKNLNWVMEGG Trigger: ACCCCCTTCCATAACCCAATTCAGGTTTTTAACTCAATGTAGATTCTCCAAGCACTTTACAGATGAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAAGCCTGTGGCCTCGCTaGGGCCACCTCCACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGSLWPR*GHLHPH Trigger: GTGGGGGTGGAGGTGGCCCCAGCGAGGCCACAGGCT...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAATGGCGGTGCTGGAGTaGGGCATGCTGGGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGMAVLE*GMLGCQ Trigger: CTGGCAGCCCAGCATGCCCCACTCCAGCACCGCCAT...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAGTACACGGGCGGCACTaGACACCGGCCTACAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGVHGRH*TPAYRV Trigger: CACCCTGTAGGCCGGTGTCCAGTGCCGCCCGTGTAC...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAGGTGGGGCTGCTGCCTaGGGTGGATGTGGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGGGAAA*GGCGAA Trigger: AGCAGCTCCACATCCACCCCAGGCAGCAGCCCCACC...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCGCCGAGGCCGCCCACTaGTGTCCTGGCAGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPAEAAH*CPGSWG Trigger: ACCCCAACTGCCAGGACAGCAGTGGGCGGCCTCGGC...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAGGAAGGAGCCAGCAGTaGCAGGTGAGGGGGATACAG | + |
|
Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGGRSQQ*QVRGIQ Trigger: CTGTATCCCCCTCACCTGTCACTGCTGGCTCCTTCC...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAGCCAGAGAAGGTCCCTaGGAAGACCCCTGGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGAREGP*EDPWSM Trigger: CATGCTCCAGGGGTCTTCTCAGGGACCTTCTCTGGC...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATGCTGGAGTGGGGCATaGTGGGCTGCCAGTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGCWSGA*WAASCN Trigger: GTTGCAACTGGCAGCCCAGCATGCCCCACTCCAGCA...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCATGGCGGTGCTGGAGTaGGGCATGCTGGGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPMAVLE*GMLGCQ Trigger: CTGGCAGCCCAGCATGCCCCACTCCAGCACCGCCAT...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCTGCCTGGGGTGGATGTaGAGCTGCTGCTGGCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPCLGWM*SCCWRV Trigger: CACCCGCCAGCAGCAGCTCCACATCCACCCCAGGCA...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGTGCGGGATCGAGGGGTaGGGCTGCTGCCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVQSVASSCPVYGIGDVQCGIEG*GCCLGW Trigger: CCACCCCAGGCAGCAGCCCCACCCCTCGATCCCGCA...CTGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAAGCCTGTGGCCTCGCTaGGGCCACCTCCACCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTSLWPR*GHLHPH Trigger: GTGGGGGTGGAGGTGGCCCCAGCGAGGCCACAGGCT...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAGCAGCTTCCCCGAACTaGGCCGGGTGTCTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGAASPN*AGCLCE Trigger: TTCACAAAGACACCCGGCTCAGTTCGGGGAAGCTGC...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCCTGACAGAAAGTCACTaGCCTGGGGCCTCTCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPLTESH*PGASRR Trigger: GCGGCGAGAGGCCCCAGGTCAGTGACTTTCTGTCAG...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042057.12 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGACAAAGGCGAGCGGCCTaGCAGAAAGTCACTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGQRRAA*QKVTDL Trigger: CAGGTCAGTGACTTTCTGTCAGGCCGCTCGCCTTTG...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCCACCGGCCTACAGGGTaGAGACACTGGGGTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPHRPTG*RHWGGY Trigger: GTAGCCACCCCAGTGTCTTCACCCTGTAGGCCGGTG...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGGGCGGCGGCTGCTGCTaGGGCAGCAGCAAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: SVQSVASSCPVYGIGDVQGGGCC*GSSKHM Trigger: CATGTGCTTGCTGCTGCCGCAGCAGCAGCCGCCGCC...CTGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGCCCCTCTCTGGGCTCTaGGGTCCCTGTCGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVQSVASSCPVYGIGDVQPLSGL*GPCRCH Trigger: GTGGCACCGACAGGGACCCCAGAGCCCAGAGAGGGG...CTGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042057.12 |
||
| CDS-3UTR CCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCAGAAAGTCACTGACCTaGGGCCTCTCGCCGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPRKSLT*GLSPPL Trigger: GAGGGGCGGCGAGAGGCCCCAGGTCAGTGACTTTCT...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042057.12 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAATGTGGAGCTGCTGCTaGCGGGTGGAGAACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGMWSCC*RVENSP Trigger: TGGACTGTTCTCCACCCGCCAGCAGCAGCTCCACAT...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGGCGGCGGCTGCTGCTaGGGCAGCAGCAAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: KRTMGGLLPEASNLSPVDGGGCC*GSSKHM Trigger: CATGTGCTTGCTGCTGCCGCAGCAGCAGCCGCCGCC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAGCCGAGGCCGCCCACTaGTGTCCTGGCAGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTAEAAH*CPGSWG Trigger: ACCCCAACTGCCAGGACAGCAGTGGGCGGCCTCGGC...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACATCCGGCCTCGAGGCCTaGGACATGAGGCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTSGLEA*DMRPAS Trigger: GGAAGCTGGCCTCATGTCCCAGGCCTCGAGGCCGGA...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACATGCCTGGGGTGGATGTaGAGCTGCTGCTGGCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTCLGWM*SCCWRV Trigger: CACCCGCCAGCAGCAGCTCCACATCCACCCCAGGCA...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CCA 90 bp | AGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGGGCTGCTGCCTGGGGTaGATGTGGAGCTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVQSVASSCPVYGIGDVQGCCLG*MWSCCW Trigger: CCAGCAGCAGCTCCACATCCACCCCAGGCAGCAGCC...CTGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGATGCGGGATCGAGGGGTaGGGCTGCTGCCTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGCGIEG*GCCLGW Trigger: CCACCCCAGGCAGCAGCCCCACCCCTCGATCCCGCA...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATTGCACATTCGAATCTaGCTCTGGCCCTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELGRSASSLWRPPAPCMGLHIRI*LWPWSR Trigger: CCTGCTCCAGGGCCAGAGCCAGATTCGAATGTGCAA...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAGCGGAGCTGGGTCAGTaGGGGTGGCATGCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTAELGQ*GWHALV Trigger: TACCAGGGCATGCCACCCTCACTGACCCAGCTCCGC...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR TCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGAGGCAGGTGAGCACTaGGCATGGCAGCGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTMGGLLPEASNLSPVDEAGEH*AWQRSW Trigger: CCAGCTCCGCTGCCATGCTCAGTGCTCACCTGCCTC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR GCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGCAAGCACATGGCGGTaGTGGAGTGGGGCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTASTWR*WSGACW Trigger: CCAGCATGCCCCACTCCAGCACCGCCATGTGCTTGC...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACATCCGGCCTCGAGGCCTaGGACATGAGGCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTSGLEA*DMRPAS Trigger: GGAAGCTGGCCTCATGTCCCAGGCCTCGAGGCCGGA...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAAGCACATGGCGGTGCTaGAGTGGGGCATGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTSTWRC*SGACWA Trigger: AGCCCAGCATGCCCCACTCCAGCACCGCCATGTGCT...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGCAGCAGCAAGCACATaGCGGTGCTGGAGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTAAAST*RCWSGA Trigger: TGCCCCACTCCAGCACCGCCATGTGCTTGCTGCTGC...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGTACACGGGCGGCACTaGACACCGGCCTACAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTMGGLLPEASNLSPVDVHGRH*TPAYRV Trigger: CACCCTGTAGGCCGGTGTCCAGTGCCGCCCGTGTAC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCATGTGGAGCTGCTGCTaGCGGGTGGAGAACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPMWSCC*RVENSP Trigger: TGGACTGTTCTCCACCCGCCAGCAGCAGCTCCACAT...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGGCTGCTGCCTGGGGTaGATGTGGAGCTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPGCCLG*MWSCCW Trigger: CCAGCAGCAGCTCCACATCCACCCCAGGCAGCAGCC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGGTGGGGCTGCTGCCTaGGGTGGATGTGGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPGGAAA*GGCGAA Trigger: AGCAGCTCCACATCCACCCCAGGCAGCAGCCCCACC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGGCCAGCTTTGCGGCTaGGGGTCCAGTGGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTMGGLLPEASNLSPVDGQLCG*GSSGKA Trigger: GGCCTTACCACTGGACCCCCAGCCGCAAAGCTGGCC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGGCCAGCTTTGCGGCTaGGGGTCCAGTGGTAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPGQLCG*GSSGKA Trigger: GGCCTTACCACTGGACCCCCAGCCGCAAAGCTGGCC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGGAAGGAGCCAGCAGTaGCAGGTGAGGGGGATACAG | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTGRSQQ*QVRGIQ Trigger: CTGTATCCCCCTCACCTGTCACTGCTGGCTCCTTCC...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGAGCGGAGCTGGGTCAGTaGGGGTGGCATGCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGAELGQ*GWHALV Trigger: TACCAGGGCATGCCACCCTCACTGACCCAGCTCCGC...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGAGAGGCAGGTGAGCACTaGGCATGGCAGCGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGEAGEH*AWQRSW Trigger: CCAGCTCCGCTGCCATGCTCAGTGCTCACCTGCCTC...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAGCACGAGCGTCAACTTaGTCCCATCCCCCACGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTARAST*SHPPRR Trigger: TCGGCGTGGGGGATGGGAGCAAGTTGACGCTCGTGC...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGCACGAGCGTCAACTTaGTCCCATCCCCCACGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPARAST*SHPPRR Trigger: TCGGCGTGGGGGATGGGAGCAAGTTGACGCTCGTGC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACATGCTGGAGTGGGGCATaGTGGGCTGCCAGTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTCWSGA*WAASCN Trigger: GTTGCAACTGGCAGCCCAGCATGCCCCACTCCAGCA...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAGCAAGCACATGGCGGTaGTGGAGTGGGGCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTASTWR*WSGACW Trigger: CCAGCATGCCCCACTCCAGCACCGCCATGTGCTTGC...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAACAGGTTGTGGAGGCTaGGTGGGATCGGAAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTTGCGG*VGSEGA Trigger: GGCTCCTTCCGATCCCACGCAGCCTCCACAACCTGT...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCCGCAGGCGCTTCTGCTaGAACAGGAGCTGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPRRRFC*NRSWRR Trigger: ACGCCTCCAGCTCCTGTTGCAGCAGAAGCGCCTGCG...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACCGCAGGCGCTTCTGCTaGAACAGGAGCTGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KRTMGGLLPEASNLSPVDRRRFC*NRSWRR Trigger: ACGCCTCCAGCTCCTGTTGCAGCAGAAGCGCCTGCG...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGTCCCCGTAGTGCTGTaGATCGCCAGGCTCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTVPVVL*IARLMG Trigger: ACCCATGAGCCTGGCGATCCACAGCACTACGGGGAC...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGGCTGCTGCTGGCGGGTaGAGAACAGTCCATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVQSVASSCPVYGIGDVQAAAGG*RTVHLL Trigger: GAGCAGATGGACTGTTCTCCACCCGCCAGCAGCAGC...CTGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGCTGCTGCTGGCGGGTaGAGAACAGTCCATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTAAAGG*RTVHLL Trigger: GAGCAGATGGACTGTTCTCCACCCGCCAGCAGCAGC...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCTGCTGTCCTGGCAGTTaGGGTGTAGTGTGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPCCPGS*GVVCQR Trigger: TCTCTGGCACACTACACCCCAACTGCCAGGACAGCA...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGCGCCCACTGCTGTCCTaGCAGTTGGGGTGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVQSVASSCPVYGIGDVQRPLLS*QLGCSV Trigger: CACACTACACCCCAACTGCCAGGACAGCAGTGGGCG...CTGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAGCATGGCAGCGGAGCTaGGTCAGTGAGGGTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTAWQRS*VSEGGM Trigger: CATGCCACCCTCACTGACCCAGCTCCGCTGCCATGC...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCATTCGAATCTGGCTCTaGCCCTGGAGCAGGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPIRIWL*PWSRDV Trigger: CACATCCCTGCTCCAGGGCCAGAGCCAGATTCGAAT...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | AGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGGCAGCTTCCCCGAACTaGGCCGGGTGTCTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVQSVASSCPVYGIGDVQAASPN*AGCLCE Trigger: TTCACAAAGACACCCGGCTCAGTTCGGGGAAGCTGC...CTGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACACAAAGGCGAGCGGCCTaGCAGAAAGTCACTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTQRRAA*QKVTDL Trigger: CAGGTCAGTGACTTTCTGTCAGGCCGCTCGCCTTTG...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGACACCGGCCTACAGGGTaGAGACACTGGGGTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGHRPTG*RHWGGY Trigger: GTAGCCACCCCAGTGTCTTCACCCTGTAGGCCGGTG...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGCCAGAGAAGGTCCCTaGGAAGACCCCTGGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPAREGP*EDPWSM Trigger: CATGCTCCAGGGGTCTTCTCAGGGACCTTCTCTGGC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCCTGACAGAAAGTCACTaGCCTGGGTCTCGGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPLTESH*PGSRSN Trigger: GTTTGACCGAGACCCAGGTCAGTGACTTTCTGTCAG...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACACCCACGCCGAATTCCTaGAGCTTCCCCGAACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTPTPNS*SFPELS Trigger: GCTCAGTTCGGGGAAGCTGCAGGAATTCGGCGTGGG...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCTGGGGTCCCTGTCGGTaGCACGGACGCTTAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPWGPCR*HGRLNK Trigger: TTTATTTAAGCGTCCGTGGCACCGACAGGGACCCCA...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042057.12 |
||
| CDS-3UTR GCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACATGGATGTGGAGCTGCTaGTGGCGGGTGGAGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTWMWSC*WRVENS Trigger: ACTGTTCTCCACCCGCCAGCAGCAGCTCCACATCCA...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGTATCTGCAGAATGGTaGCGATGTCACGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTVSAEW*RCHAEA Trigger: GGCCTCGGCGTGACATCGGCACCATTCTGCAGATAC...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCGGTACTTTGAGGCGTTaGGACAACCTTTTGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RALPSVELMQAQSRTPLPGTLRR*DNLLRS Trigger: GCTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACC...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGCTCAGGACAGGTTGTaGAGGCTGCGTGGGATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRTMGGLLPEASNLSPVDAQDRL*RLRGIG Trigger: TCCGATCCCACGCAGCCTCCACAACCTGTCCTGAGC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCGCTCAGGACAGGTTGTaGAGGCTGCGTGGGATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPAQDRL*RLRGIG Trigger: TCCGATCCCACGCAGCCTCCACAACCTGTCCTGAGC...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACACGCCCACTGCTGTCCTaGCAGTTGGGGTGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTRPLLS*QLGCSV Trigger: CACACTACACCCCAACTGCCAGGACAGCAGTGGGCG...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGACCCACGCCGAATTCCTaGAGCTTCCCCGAACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGPTPNS*SFPELS Trigger: GCTCAGTTCGGGGAAGCTGCAGGAATTCGGCGTGGG...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCTGGATGTGGAGCTGCTaGTGGCGGGTGGAGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPWMWSC*WRVENS Trigger: ACTGTTCTCCACCCGCCAGCAGCAGCTCCACATCCA...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGGGATGTGGAGGAGGTaGCTGCCAGCTTTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTMGGLLPEASNLSPVDGMWRR*LPAFHR Trigger: CCTGTGAAAAGCTGGCAGCCACCTCCTCCACATCCC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAATTCGAATCTGGCTCTaGCCCTGGAGCAGGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTIRIWL*PWSRDV Trigger: CACATCCCTGCTCCAGGGCCAGAGCCAGATTCGAAT...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACATGCTGTCCTGGCAGTTaGGGTGTAGTGTGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTCCPGS*GVVCQR Trigger: TCTCTGGCACACTACACCCCAACTGCCAGGACAGCA...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGAGGGATGTGGAGGAGGTaGCTGCCAGCTTTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGGMWRR*LPAFHR Trigger: CCTGTGAAAAGCTGGCAGCCACCTCCTCCACATCCC...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAAGCACATGGCGGTGCTaGAGTGGGGCATGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHTVGEETRTGSQPRTKESTWRC*SGACWA Trigger: AGCCCAGCATGCCCCACTCCAGCACCGCCATGTGCT...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAGCAGCAGCAAGCACATaGCGGTGCTGGAGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KHTVGEETRTGSQPRTKEAAAST*RCWSGA Trigger: TGCCCCACTCCAGCACCGCCATGTGCTTGCTGCTGC...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAGCATGGCAGCGGAGCTaGGTCAGTGAGGGTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KHTVGEETRTGSQPRTKEAWQRS*VSEGGM Trigger: CATGCCACCCTCACTGACCCAGCTCCGCTGCCATGC...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCACCACAAACTCGGACTaGATGTCCGGGTTGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPTTNSD*MSGLTS Trigger: TGAAGTCAACCCGGACATCCAGTCCGAGTTTGTGGT...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAACCACAAACTCGGACTaGATGTCCGGGTTGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTTTNSD*MSGLTS Trigger: TGAAGTCAACCCGGACATCCAGTCCGAGTTTGTGGT...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACCACTTAGGAGGTCATTaGGTATCTGCAGAATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRTMGGLLPEASNLSPVDHLGGH*VSAEWC Trigger: GCACCATTCTGCAGATACTCAATGACCTCCTAAGTG...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAACAGGTTGTGGAGGCTaGGTGGGATCGGAAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHTVGEETRTGSQPRTKETGCGG*VGSEGA Trigger: GGCTCCTTCCGATCCCACGCAGCCTCCACAACCTGT...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGACACTTAGGAGGTCATTaGGTATCTGCAGAATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGHLGGH*VSAEWC Trigger: GCACCATTCTGCAGATACTCAATGACCTCCTAAGTG...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGAAAACTTTCCAAGGCTTaGATAACGGACTGTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGKLSKA*ITDCSG Trigger: GCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTT...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAACAGGTGAGGAAGGGCTaGTGGATACTGGGGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KHTVGEETRTGSQPRTKEQVRKG*WILGVH Trigger: GTGTACCCCCAGTATCCAGCAGCCCTTCCTCACCTG...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAGTATCTGCAGAATGGTaGCGATGTCACGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHTVGEETRTGSQPRTKEVSAEW*RCHAEA Trigger: GGCCTCGGCGTGACATCGGCACCATTCTGCAGATAC...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACAAGGTCATTGAGTATCTaGAGAATGGTGCCGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RELWVGSCLRPPISAQWTRSLSI*RMVPMS Trigger: TGACATCGGCACCATTCTGCAGATACTCAATGACCT...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR GCA 90 bp | CAAACCGAATTCTCGCTTGGCCTCTACCGTTCAGGATCCCCTTCCCACCCACCCAGGTCATTGAGTATCTaGAGAATGGTGCCGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTEFSLGLYRSGSPSHPPRSLSI*RMVPMS Trigger: TGACATCGGCACCATTCTGCAGATACTCAATGACCT...GGGTGGGTGGGAAGGGGATCCTGAACGGTAGAGGCCAAGCGAGAATTCGGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| 3UTR CAA 72 bp | AGCCACTTGCTTCAGCTTTTTCCATCCAACGAGCTTTaGTGGCAAGAGCAAGGCCAGCCAAGCATAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHLLQLFPSNEL*WQEQGQPSIVA Trigger: TGCCACTATGCTTGGCTGGCCTTGCTCTTGCCACAAAAGCTCGTTGGATGGAAAAAGCTGAAGCAAGTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS GCA 90 bp | GTCGTAGCGGGTCCCCGTAGTGCTGTGGATCGCCAGGCTCATGGGTaGGGCCGACTCCGTGGCCGTGTTCAGCTCGCAGGCGCCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVAGPRSAVDRQAHG*GRLRGRVQLAGAAG Trigger: CCCGGCGGCGCCTGCGAGCTGAACACGGCCACGGAGTCGGCCGCACCCATGAGCCTGGCGATCCACAGCACTACGGGGACCCGCTACGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000151202.2 |
||
| CDS GCA 90 bp | TTTGCGGCTGGGGGTCCAGTGGTAAGGCCCCCGGGCGTCCCGCCGTaGCTTCCTGCGCAGGCGCTTCTGCTGCAACAGGAGCTGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FAAGGPVVRPPGVPP*LPAQALLLQQELEA Trigger: CGCCTCCAGCTCCTGTTGCAGCAGAAGCGCCTGCGCAGGAAGGCACGGCGGGACGCCCGGGGGCCTTACCACTGGACCCCCAGCCGCAAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS GCA 90 bp | GGCCCCCGGGCGTCCCGCCGTGCCTTCCTGCGCAGGCGCTTCTGCTaGAACAGGAGCTGGAGGCGTTCCACTTTGCAACGTGTGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRASRRAFLRRRFC*NRSWRRSTLQRVAR Trigger: CCGTGCCACACGTTGCAAAGTGGAACGCCTCCAGCTCCTGTTGCAGCAGAAGCGCCTGCGCAGGAAGGCACGGCGGGACGCCCGGGGGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS GCA 90 bp | TGGGGGTCCAGTGGTAAGGCCCCCGGGCGTCCCGCCGTGCCTTCCTaGGCAGGCGCTTCTGCTGCAACAGGAGCTGGAGGCGTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: WGSSGKAPGRPAVPS*AGASAATGAGGVPL Trigger: AAGTGGAACGCCTCCAGCTCCTGTTGCAGCAGAAGCGCCTGCGCAGGAAGGCACGGCGGGACGCCCGGGGGCCTTACCACTGGACCCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAAGCGCCAGGCGTTCCTaGGGTACTTTGAGGCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELGRSASSLWRPPAPCMGSARRS*GTLRRW Trigger: CCAACGCCTCAAAGTACCCAAGGAACGCCTGGCGCT...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CCA 90 bp | CAGGTGAGGAAGGGCTGCTGGATACTGGGGGTACACGGGCGGCACTaGACACCGGCCTACAGGGTGAAGACACTGGGGTGGCTACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVRKGCWILGVHGRH*TPAYRVKTLGWLHW Trigger: CCAGTGTAGCCACCCCAGTGTCTTCACCCTGTAGGCCGGTGTCCAGTGCCGCCCGTGTACCCCCAGTATCCAGCAGCCCTTCCTCACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS CCA 90 bp | AATGACCGCACCAGGTTTGCGGGATCGAGGGGTGGGGCTGCTGCCTaGGGTGGATGTGGAGCTGCTGCTGGCGGGTGGAGAACAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NDRTRFAGSRGGAAA*GGCGAAAGGWRTVH Trigger: ATGGACTGTTCTCCACCCGCCAGCAGCAGCTCCACATCCACCCCAGGCAGCAGCCCCACCCCTCGATCCCGCAAACCTGGTGCGGTCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS GCA 90 bp | CCGGGTGTCGCTGGGGGCTGGGTCTCGGTCAAACTTTCCAAGGCTTaGATAACGGACTGTTCCGGCCTCGAGGCCTGGGACATGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGVAGGWVSVKLSKA*ITDCSGLEAWDMRP Trigger: TGGCCTCATGTCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTTGACCGAGACCCAGCCCCCAGCGACACCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042057.12 |
||
| CDS GCA 90 bp | GGGGTGGATGTGGAGCTGCTGCTGGCGGGTGGAGAACAGTCCATCTaGTCAGGACAGGTTGTGGAGGCTGCGTGGGATCGGAAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GVDVELLLAGGEQSI*SGQVVEAAWDRKEP Trigger: TGGCTCCTTCCGATCCCACGCAGCCTCCACAACCTGTCCTGAGCAGATGGACTGTTCTCCACCCGCCAGCAGCAGCTCCACATCCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS-3UTR CAA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCTCTGCTCAGGACAGGTaGTGGAGGCTGCGTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RALPSVELMQAQSRTPLPSAQDR*WRLRGI Trigger: GATCCCACGCAGCCTCCACAACCTGTCCTGAGCAGA...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 90 bp | AGTGGGGCATGCTGGGCTGCCAGTTGCAACTGCACAAACATCATGTaGTCCCCGACTCGCAGGGCCAGGGTCAAAGGCGAGCGGCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGACWAASCNCTNIM*SPTRRARVKGERPD Trigger: GTCAGGCCGCTCGCCTTTGACCCTGGCCCTGCGAGTCGGGGATCACATGATGTTTGTGCAGTTGCAACTGGCAGCCCAGCATGCCCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS CCA 90 bp | TGCAGAATGGTGCCGATGTCACGCCGAGGCCGCCCACTGCTGTCCTaGCAGTTGGGGTGTAGTGTGCCAGAGAAGGTCCCTGAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: CRMVPMSRRGRPLLS*QLGCSVPEKVPEKT Trigger: GGTCTTCTCAGGGACCTTCTCTGGCACACTACACCCCAACTGCCAGGACAGCAGTGGGCGGCCTCGGCGTGACATCGGCACCATTCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CAA 90 bp | CGCGCCCTCCCCAGCGTGGAGTTAATGCAGGCACAGTCCAGAACCCCTCTTCCCTCACAGGAGGTAGTTTaGGGGGTGAGGTCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RALPSVELMQAQSRTPLPSQEVV*GVRSGA Trigger: AGCCCCTGACCTCACCCCCAAAACTACCTCCTGTGA...GGGAAGAGGGGTTCTGGACTGTGCCTGCATTAACTCCACGCTGGGGAGGGCGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS TCA 90 bp | AGGGTGGCATGCCCTGGTAGTGCCTCGTGGCACTTAGGAGGTCATTaGGTATCTGCAGAATGGTGCCGATGTCACGCCGAGGCCGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVACPGSASWHLGGH*VSAEWCRCHAEAAH Trigger: GTGGGCGGCCTCGGCGTGACATCGGCACCATTCTGCAGATACTCAATGACCTCCTAAGTGCCACGAGGCACTACCAGGGCATGCCACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS GCA 90 bp | GGCAGCAGCAAGCACATGGCGGTGCTGGAGTGGGGCATGCTGGGCTaGCAGTTGCAACTGCACAAACATCATGTGATCCCCGACTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSKHMAVLEWGMLG*QLQLHKHHVIPDSQ Trigger: CTGCGAGTCGGGGATCACATGATGTTTGTGCAGTTGCAACTGGCAGCCCAGCATGCCCCACTCCAGCACCGCCATGTGCTTGCTGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS-3UTR CAA 90 bp | CAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACACGGTCTCCAGGGGGCTaGCACATTCGAATCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRPVCGVLLPRVWDRGCTRSPGG*HIRIWL Trigger: GAGCCAGATTCGAATGTGCAAGCCCCCTGGAGACCG...TGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 90 bp | GCCGGGTGTCTTTGTGAAGCAGCGCCAGGCGTTCCTTGGGTACTTTaGGGCGTTGGGACAACCTTTTGCGCAGCCCTTCCACGGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: AGCLCEAAPGVPWVL*GVGTTFCAALPRSR Trigger: ACGAGACCGTGGAAGGGCTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCCAAGGAACGCCTGGCGCTGCTTCACAAAGACACCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 90 bp | CATGTGATCCCCGACTCGCAGGGCCAGGGTCAAAGGCGAGCGGCCTaGCAGAAAGTCACTGACCTGGGTCTCGGTCAAACTTTCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HVIPDSQGQGQRRAA*QKVTDLGLGQTFQG Trigger: GCCTTGGAAAGTTTGACCGAGACCCAGGTCAGTGACTTTCTGTCAGGCCGCTCGCCTTTGACCCTGGCCCTGCGAGTCGGGGATCACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACCTGCTGTCCTGGCAGTaGGGGTGTAGTGTGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KRTMGGLLPEASNLSPVDLLSWQ*GCSVPE Trigger: CTCTGGCACACTACACCCCAACTGCCAGGACAGCAG...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CAA 90 bp | GAGCTGGGCCGCTCAGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGAGCACTTAGGAGGTCATaGAGTATCTGCAGAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ELGRSASSLWRPPAPCMGALRRS*SICRMV Trigger: CACCATTCTGCAGATACTCAATGACCTCCTAAGTGC...TCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCTGAGCGGCCCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS-3UTR CAA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACACGGTCTCCAGGGGGCTaGCACATTCGAATCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RELWVGSCLRPPISAQWTRSPGG*HIRIWL Trigger: GAGCCAGATTCGAATGTGCAAGCCCCCTGGAGACCG...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CCA 90 bp | AAACTTTCCAAGGCTTGCATAACGGACTGTTCCGGCCTCGAGGCCTaGGACATGAGGCCAGCTTCCACCGTGGGCACGAGCGTCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KLSKACITDCSGLEA*DMRPASTVGTSVNL Trigger: CAAGTTGACGCTCGTGCCCACGGTGGAAGCTGGCCTCATGTCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CAA 90 bp | AGCGTCCAGTCTGTGGCGTCCTCCTGCCCCGTGTATGGGATAGGGGATGTACAGGGGTACTTTGAGGCGTaGGGACAACCTTTTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVQSVASSCPVYGIGDVQGYFEA*GQPFAQ Trigger: CTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCC...CTGTACATCCCCTATCCCATACACGGGGCAGGAGGACGCCACAGACTGGACGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CAA 90 bp | GGCTTCCTCCGTCTGGGCCATCCGGGAACAGACTGCTACATATTTGGAGCTGGAAGCGCCAGGCGTTCCTaGGGTACTTTGAGGCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GFLRLGHPGTDCYIFGAGSARRS*GTLRRW Trigger: CCAACGCCTCAAAGTACCCAAGGAACGCCTGGCGCT...TCCAGCTCCAAATATGTAGCAGTCTGTTCCCGGATGGCCCAGACGGAGGAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CAA 90 bp | AGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACATCACAGGAGGTAGTTTaGGGGGTGAGGTCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RELWVGSCLRPPISAQWTSQEVV*GVRSGA Trigger: AGCCCCTGACCTCACCCCCAAAACTACCTCCTGTGA...TGTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CCA 90 bp | GGGTGTAGTGTGCCAGAGAAGGTCCCTGAGAAGACCCCTGGAGCATaGTTCACGAAGCTCTCAATGACCGCACCAGGTTTGCGGGATCGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSVPEKVPEKTPGA*FTKLSMTAPGLRDR Trigger: TCGATCCCGCAAACCTGGTGCGGTCATTGAGAGCTTCGTGAACCATGCTCCAGGGGTCTTCTCAGGGACCTTCTCTGGCACACTACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CAA 90 bp | AAGAGAACTATGGGTGGGCTCCTGCCTGAGGCCTCCAATCTCAGCCCAGTGGACGGGTACTTTGAGGCGTaGGGACAACCTTTTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KRTMGGLLPEASNLSPVDGYFEA*GQPFAQ Trigger: CTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCC...GTCCACTGGGCTGAGATTGGAGGCCTCAGGCAGGAGCCCACCCATAGTTCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS GCA 90 bp | GACAGAAAGTCACTGACCTGGGTCTCGGTCAAACTTTCCAAGGCTTaGATAACGGACTGTTCCGGCCTCGAGGCCTGGGACATGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DRKSLTWVSVKLSKA*ITDCSGLEAWDMRP Trigger: TGGCCTCATGTCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTTGACCGAGACCCAGGTCAGTGACTTTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099492.10 |
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| CDS-3UTR CAA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAATCTGCTCAGGACAGGTaGTGGAGGCTGCGTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: KHTVGEETRTGSQPRTKESAQDR*WRLRGI Trigger: GATCCCACGCAGCCTCCACAACCTGTCCTGAGCAGA...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CAA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAACTGCTGTCCTGGCAGTaGGGGTGTAGTGTGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KHTVGEETRTGSQPRTKELLSWQ*GCSVPE Trigger: CTCTGGCACACTACACCCCAACTGCCAGGACAGCAG...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS-3UTR CAA 90 bp | AAACACACAGTGGGGGAAGAGACAAGGACGGGTTCACAGCCTAGAACAAAGGAAATGCTGGGCTGCCAGTaGCAACTGCACAAACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: KHTVGEETRTGSQPRTKEMLGCQ*QLHKHH Trigger: ATGATGTTTGTGCAGTTGCAACTGGCAGCCCAGCAT...TTCCTTTGTTCTAGGCTGTGAACCCGTCCTTGTCTCTTCCCCCACTGTGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CCA 72 bp | TGTGGATCGCCAGGCTCATGGGTGCGGCCGACTCCGTaGCCGTGTTCAGCTCGCAGGCGCCGCCGGGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CGSPGSWVRPTP*PCSARRRRRGP Trigger: GGGCCCCCGGCGGCGCCTGCGAGCTGAACACGGCCACGGAGTCGGCCGCACCCATGAGCCTGGCGATCCACA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000151202.2 |
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| CDS GCA 72 bp | GGTGGCTACACTGGAGTCTCCCCGGGCGGCGGCGGCTaGTGCTGCGGCAGCAGCAAGCACATGGCGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGYTGVSPGGGG*CCGSSKHMAVL Trigger: CAGCACCGCCATGTGCTTGCTGCTGCCGCAGCAGCAGCCGCCGCCGCCCGGGGAGACTCCAGTGTAGCCACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS GCA 72 bp | GGGGGTCCAGTGGTAAGGCCCCCGGGCGTCCCGCCGTaGCTTCCTGCGCAGGCGCTTCTGCTGCAACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGPVVRPPGVPP*LPAQALLLQQE Trigger: CTCCTGTTGCAGCAGAAGCGCCTGCGCAGGAAGGCACGGCGGGACGCCCGGGGGCCTTACCACTGGACCCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS CCA 72 bp | CACTGCTGCTGCTGTCGCTACGGCCAGCTTTGCGGCTaGGGGTCCAGTGGTAAGGCCCCCGGGCGTCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HCCCCRYGQLCG*GSSGKAPGRPA Trigger: GGCGGGACGCCCGGGGGCCTTACCACTGGACCCCCAGCCGCAAAGCTGGCCGTAGCGACAGCAGCAGCAGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS GCA 72 bp | AGCCTGTGGCCTCGCTGGGGCCACCTCCACCCCCACTaGTGCTGCTGTCGCTACGGCCAGCTTTGCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLWPRWGHLHPH*CCCRYGQLCGW Trigger: CCAGCCGCAAAGCTGGCCGTAGCGACAGCAGCAGCAGTGGGGGTGGAGGTGGCCCCAGCGAGGCCACAGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS TCA 72 bp | CCCGACTCGCAGGGCCAGGGTCAAAGGCGAGCGGCCTaGCAGAAAGTCACTGACCTGGGGCCTCTCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PDSQGQGQRRAA*QKVTDLGPLAA Trigger: GGCGGCGAGAGGCCCCAGGTCAGTGACTTTCTGTCAGGCCGCTCGCCTTTGACCCTGGCCCTGCGAGTCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042057.12 |
||
| CDS GCA 72 bp | GGTCCCCGTAGTGCTGTGGATCGCCAGGCTCATGGGTaGGGCCGACTCCGTGGCCGTGTTCAGCTCGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPRSAVDRQAHG*GRLRGRVQLAG Trigger: GCCTGCGAGCTGAACACGGCCACGGAGTCGGCCGCACCCATGAGCCTGGCGATCCACAGCACTACGGGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000151202.2 |
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| CDS CCA 72 bp | CACTGGACACCGGCCTACAGGGTGAAGACACTGGGGTaGCTACACTGGAGTCTCCCCGGGCGGCGGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HWTPAYRVKTLG*LHWSLPGRRRL Trigger: CAGCCGCCGCCGCCCGGGGAGACTCCAGTGTAGCCACCCCAGTGTCTTCACCCTGTAGGCCGGTGTCCAGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS TCA 72 bp | CCAGGGTCAAAGGCGAGCGGCCTGACAGAAAGTCACTaGCCTGGGGCCTCTCGCCGCCCCTCTCTGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGSKASGLTESH*PGASRRPSLGS Trigger: AGAGCCCAGAGAGGGGCGGCGAGAGGCCCCAGGTCAGTGACTTTCTGTCAGGCCGCTCGCCTTTGACCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000153477.8 |
||
| CDS TCA 72 bp | GGGTACACGGGCGGCACTGGACACCGGCCTACAGGGTaGAGACACTGGGGTGGCTACACTGGAGTCTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GYTGGTGHRPTG*RHWGGYTGVSP Trigger: CGGGGAGACTCCAGTGTAGCCACCCCAGTGTCTTCACCCTGTAGGCCGGTGTCCAGTGCCGCCCGTGTACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS GCA 72 bp | CGGGCGTCCCGCCGTGCCTTCCTGCGCAGGCGCTTCTaGTGCAACAGGAGCTGGAGGCGTTCCACTTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RASRRAFLRRRF*CNRSWRRSTLQ Trigger: TTGCAAAGTGGAACGCCTCCAGCTCCTGTTGCAGCAGAAGCGCCTGCGCAGGAAGGCACGGCGGGACGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS CCA 72 bp | GCTGCTGCTGCGGCAGCAGCAAGCACATGGCGGTGCTaGAGTGGGGCATGCTGGGCTGCCAGTTGCAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAAASTWRC*SGACWAASCNC Trigger: GCAGTTGCAACTGGCAGCCCAGCATGCCCCACTCCAGCACCGCCATGTGCTTGCTGCTGCCGCAGCAGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS GCA 72 bp | GCGTCCCGCCGTGCCTTCCTGCGCAGGCGCTTCTGCTaGAACAGGAGCTGGAGGCGTTCCACTTTGCAACGT | + |
|
Preference number: 6 (lower is better) Translates to: ASRRAFLRRRFC*NRSWRRSTLQR Trigger: ACGTTGCAAAGTGGAACGCCTCCAGCTCCTGTTGCAGCAGAAGCGCCTGCGCAGGAAGGCACGGCGGGACGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS CCA 72 bp | AAGGGCTGCTGGATACTGGGGGTACACGGGCGGCACTaGACACCGGCCTACAGGGTGAAGACACTGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KGCWILGVHGRH*TPAYRVKTLGW Trigger: CCACCCCAGTGTCTTCACCCTGTAGGCCGGTGTCCAGTGCCGCCCGTGTACCCCCAGTATCCAGCAGCCCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
||
| CDS CCA 72 bp | GTGCCGATGTCACGCCGAGGCCGCCCACTGCTGTCCTaGCAGTTGGGGTGTAGTGTGCCAGAGAAGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPMSRRGRPLLS*QLGCSVPEKVP Trigger: AGGGACCTTCTCTGGCACACTACACCCCAACTGCCAGGACAGCAGTGGGCGGCCTCGGCGTGACATCGGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
||
| CDS CAA 90 bp | GCCTGGGACATGAGGCCAGCTTCCACCGTGGGCACGAGCGTCAACTaGCTCCCATCCCCCACGCCGAATTCCTGCAGCTTCCCCGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: AWDMRPASTVGTSVN*LPSPTPNSCSFPEL Trigger: CAGTTCGGGGAAGCTGCAGGAATTCGGCGTGGGGGATGGGAGCAAGTTGACGCTCGTGCCCACGGTGGAAGCTGGCCTCATGTCCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CAA 90 bp | CCCGGGTGTCGCTGGGGGCTGGGTCTCGGTCAAACTTTCCAAGGCTaGCATAACGGACTGTTCCGGCCTCGAGGCCTGGGACATGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PGCRWGLGLGQTFQG*HNGLFRPRGLGHEA Trigger: GGCCTCATGTCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTTGACCGAGACCCAGCCCCCAGCGACACCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042057.12 |
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| CDS GCA 72 bp | GTGGAGCTGCTGCTGGCGGGTGGAGAACAGTCCATCTaGTCAGGACAGGTTGTGGAGGCTGCGTGGGATCGG | + |
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Preference number: 6 (lower is better) Translates to: VELLLAGGEQSI*SGQVVEAAWDR Trigger: CCGATCCCACGCAGCCTCCACAACCTGTCCTGAGCAGATGGACTGTTCTCCACCCGCCAGCAGCAGCTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS GCA 72 bp | GCAGAATGGTGCCGATGTCACGCCGAGGCCGCCCACTaGTGTCCTGGCAGTTGGGGTGTAGTGTGCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: AEWCRCHAEAAH*CPGSWGVVCQR Trigger: TCTCTGGCACACTACACCCCAACTGCCAGGACAGCAGTGGGCGGCCTCGGCGTGACATCGGCACCATTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CCA 72 bp | AAGGCTTGCATAACGGACTGTTCCGGCCTCGAGGCCTaGGACATGAGGCCAGCTTCCACCGTGGGCACGAGC | + |
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Preference number: 6 (lower is better) Translates to: KACITDCSGLEA*DMRPASTVGTS Trigger: GCTCGTGCCCACGGTGGAAGCTGGCCTCATGTCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CAA 90 bp | AGCGCCAGGCGTTCCTTGGGTACTTTGAGGCGTTGGGACAACCTTTaGCGCAGCCCTTCCACGGTCTCGTCGTGGGGCACCGACAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SARRSLGTLRRWDNL*RSPSTVSSWGTDRS Trigger: CGACCTGTCGGTGCCCCACGACGAGACCGTGGAAGGGCTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCCAAGGAACGCCTGGCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 72 bp | CATCCCCCACGCCGAATTCCTGCAGCTTCCCCGAACTaGGCCGGGTGTCTTTGTGAAGCAGCGCCAGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: HPPRRIPAASPN*AGCLCEAAPGV Trigger: AACGCCTGGCGCTGCTTCACAAAGACACCCGGCTCAGTTCGGGGAAGCTGCAGGAATTCGGCGTGGGGGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 72 bp | CCCGACTCGCAGGGCCAGGGTCAAAGGCGAGCGGCCTaGCAGAAAGTCACTGACCTGGGTCTCGGTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: PDSQGQGQRRAA*QKVTDLGLGQT Trigger: AGTTTGACCGAGACCCAGGTCAGTGACTTTCTGTCAGGCCGCTCGCCTTTGACCCTGGCCCTGCGAGTCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS GCA 72 bp | GCTGGGGGCTGGGTCTCGGTCAAACTTTCCAAGGCTTaGATAACGGACTGTTCCGGCCTCGAGGCCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AGGWVSVKLSKA*ITDCSGLEAWD Trigger: GTCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTTGACCGAGACCCAGCCCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000144526.2 ENSMUST00000153477.8 |
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| CDS GCA 72 bp | GAGCATGGCAGCGGAGCTGGGTCAGTGAGGGTGGCATaGCCTGGTAGTGCCTCGTGGCACTTAGGAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: EHGSGAGSVRVA*PGSASWHLGGH Trigger: ATGACCTCCTAAGTGCCACGAGGCACTACCAGGGCATGCCACCCTCACTGACCCAGCTCCGCTGCCATGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CCA 72 bp | GCTGCCTGGGGTGGATGTGGAGCTGCTGCTGGCGGGTaGAGAACAGTCCATCTGCTCAGGACAGGTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: AAWGGCGAAAGG*RTVHLLRTGCG Trigger: TCCACAACCTGTCCTGAGCAGATGGACTGTTCTCCACCCGCCAGCAGCAGCTCCACATCCACCCCAGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS CCA 72 bp | TGTCACGCCGAGGCCGCCCACTGCTGTCCTGGCAGTTaGGGTGTAGTGTGCCAGAGAAGGTCCCTGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CHAEAAHCCPGS*GVVCQRRSLRR Trigger: TCTTCTCAGGGACCTTCTCTGGCACACTACACCCCAACTGCCAGGACAGCAGTGGGCGGCCTCGGCGTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CAA 72 bp | ATGAGGCCAGCTTCCACCGTGGGCACGAGCGTCAACTaGCTCCCATCCCCCACGCCGAATTCCTGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MRPASTVGTSVN*LPSPTPNSCSF Trigger: GAAGCTGCAGGAATTCGGCGTGGGGGATGGGAGCAAGTTGACGCTCGTGCCCACGGTGGAAGCTGGCCTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CAA 72 bp | CGCTGGGGGCTGGGTCTCGGTCAAACTTTCCAAGGCTaGCATAACGGACTGTTCCGGCCTCGAGGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RWGLGLGQTFQG*HNGLFRPRGLG Trigger: TCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTTGACCGAGACCCAGCCCCCAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000144526.2 ENSMUST00000153477.8 |
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| CDS CAA 72 bp | TGGCGGGTGGAGAACAGTCCATCTGCTCAGGACAGGTaGTGGAGGCTGCGTGGGATCGGAAGGAGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: WRVENSPSAQDR*WRLRGIGRSQQ Trigger: CTGCTGGCTCCTTCCGATCCCACGCAGCCTCCACAACCTGTCCTGAGCAGATGGACTGTTCTCCACCCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS GCA 72 bp | GGTTCTCTGTCTGTCGAAGACGGTCTCCAGGGGGCTTaGACATTCGAATCTGGCTCTGGCCCTGGAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GSLSVEDGLQGA*TFESGSGPGAG Trigger: CCCTGCTCCAGGGCCAGAGCCAGATTCGAATGTGCAAGCCCCCTGGAGACCGTCTTCGACAGACAGAGAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CCA 72 bp | AGCAGCGCCAGGCGTTCCTTGGGTACTTTGAGGCGTTaGGACAACCTTTTGCGCAGCCCTTCCACGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSARRSLGTLRR*DNLLRSPSTVS Trigger: CGAGACCGTGGAAGGGCTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCCAAGGAACGCCTGGCGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CAA 72 bp | CGTTCCTTGGGTACTTTGAGGCGTTGGGACAACCTTTaGCGCAGCCCTTCCACGGTCTCGTCGTGGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: RSLGTLRRWDNL*RSPSTVSSWGT Trigger: GGTGCCCCACGACGAGACCGTGGAAGGGCTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCCAAGGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CAA 72 bp | CGGTTCTCTGTCTGTCGAAGACGGTCTCCAGGGGGCTaGCACATTCGAATCTGGCTCTGGCCCTGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RFSVCRRRSPGG*HIRIWLWPWSR Trigger: CCTGCTCCAGGGCCAGAGCCAGATTCGAATGTGCAAGCCCCCTGGAGACCGTCTTCGACAGACAGAGAACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CAA 90 bp | GTCTTTGTGAAGCAGCGCCAGGCGTTCCTTGGGTACTTTGAGGCGTaGGGACAACCTTTTGCGCAGCCCTTCCACGGTCTCGTCGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VFVKQRQAFLGYFEA*GQPFAQPFHGLVVG Trigger: CCCCACGACGAGACCGTGGAAGGGCTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCCAAGGAACGCCTGGCGCTGCTTCACAAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 72 bp | TCCTGCAGCTTCCCCGAACTGAGCCGGGTGTCTTTGTaGAGCAGCGCCAGGCGTTCCTTGGGTACTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SCSFPELSRVSL*SSARRSLGTLR Trigger: CCTCAAAGTACCCAAGGAACGCCTGGCGCTGCTTCACAAAGACACCCGGCTCAGTTCGGGGAAGCTGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 72 bp | TGCTGGGCTGCCAGTTGCAACTGCACAAACATCATGTaGTCCCCGACTCGCAGGGCCAGGGTCAAAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: CWAASCNCTNIM*SPTRRARVKGE Trigger: CTCGCCTTTGACCCTGGCCCTGCGAGTCGGGGATCACATGATGTTTGTGCAGTTGCAACTGGCAGCCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS CAA 72 bp | AAGCAGCGCCAGGCGTTCCTTGGGTACTTTGAGGCGTaGGGACAACCTTTTGCGCAGCCCTTCCACGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: KQRQAFLGYFEA*GQPFAQPFHGL Trigger: GAGACCGTGGAAGGGCTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCCAAGGAACGCCTGGCGCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS GCA 72 bp | AAGCACATGGCGGTGCTGGAGTGGGGCATGCTGGGCTaGCAGTTGCAACTGCACAAACATCATGTGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: KHMAVLEWGMLG*QLQLHKHHVIP Trigger: GGGGATCACATGATGTTTGTGCAGTTGCAACTGGCAGCCCAGCATGCCCCACTCCAGCACCGCCATGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS GCA 72 bp | TCACTGACCTGGGTCTCGGTCAAACTTTCCAAGGCTTaGATAACGGACTGTTCCGGCCTCGAGGCCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SLTWVSVKLSKA*ITDCSGLEAWD Trigger: GTCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTTGACCGAGACCCAGGTCAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS CAA 72 bp | GTCACTGACCTGGGTCTCGGTCAAACTTTCCAAGGCTaGCATAACGGACTGTTCCGGCCTCGAGGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: VTDLGLGQTFQG*HNGLFRPRGLG Trigger: TCCCAGGCCTCGAGGCCGGAACAGTCCGTTATGCAAGCCTTGGAAAGTTTGACCGAGACCCAGGTCAGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS TCA 72 bp | CTTTGTGAAGCAGCGCCAGGCGTTCCTTGGGTACTTTaGGGCGTTGGGACAACCTTTTGCGCAGCCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LCEAAPGVPWVL*GVGTTFCAALP Trigger: TGGAAGGGCTGCGCAAAAGGTTGTCCCAACGCCTCAAAGTACCCAAGGAACGCCTGGCGCTGCTTCACAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 72 bp | TGCCCTGGTAGTGCCTCGTGGCACTTAGGAGGTCATTaGGTATCTGCAGAATGGTGCCGATGTCACGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: CPGSASWHLGGH*VSAEWCRCHAE Trigger: CTCGGCGTGACATCGGCACCATTCTGCAGATACTCAATGACCTCCTAAGTGCCACGAGGCACTACCAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS TCA 72 bp | CCAGGGTCAAAGGCGAGCGGCCTGACAGAAAGTCACTaGCCTGGGTCTCGGTCAAACTTTCCAAGGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PGSKASGLTESH*PGSRSNFPRLA Trigger: TGCAAGCCTTGGAAAGTTTGACCGAGACCCAGGTCAGTGACTTTCTGTCAGGCCGCTCGCCTTTGACCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099492.10 ENSMUST00000146516.8 |
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| CDS CCA 72 bp | GTGCCAGAGAAGGTCCCTGAGAAGACCCCTGGAGCATaGTTCACGAAGCTCTCAATGACCGCACCAGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VPEKVPEKTPGA*FTKLSMTAPGL Trigger: CAAACCTGGTGCGGTCATTGAGAGCTTCGTGAACCATGCTCCAGGGGTCTTCTCAGGGACCTTCTCTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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| CDS CAA 72 bp | CGCTTCTGCTGCAACAGGAGCTGGAGGCGTTCCACTTaGCAACGTGTGGCACGGTTCTCTGTCTGTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RFCCNRSWRRST*QRVARFSVCRR Trigger: TCTTCGACAGACAGAGAACCGTGCCACACGTTGCAAAGTGGAACGCCTCCAGCTCCTGTTGCAGCAGAAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042057.12 ENSMUST00000099492.10 |
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