Pregenerated sensors for MIDEAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042507Ensembl transcript IDs: ENSMUST00000046266.13, ENSMUST00000110294.2, ENSMUST00000220974.2
Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCACAGCCTTCCAGGTCCTCTGCGGAAGGAGGAACAATGCTGCCATaGGGCGAGCTTGTGCTTGGCTTGCCGTGGTGGCTTACTAAGGAC | + |
Preference number: 1 (lower is better) Translates to: AQPSRSSAEGGTMLP*GELVLGLPWWLTKD Trigger: GTCCTTAGTAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGACCTGGAAGGCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR GCA 90 bp | AGTCTGCACAGCCTTCCAGGTCCTCTGCGGAAGGAGGAACAATGCTaGCATGGGGCGAGCTTGTGCTTGGCTTGCCGTGGTGGCTTACTA | + |
Preference number: 1 (lower is better) Translates to: SLHSLPGPLRKEEQC*HGASLCLACRGGLL Trigger: TAGTAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGACCTGGAAGGCTGTGCAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 90 bp | GGTGGGTGGGTGGGTACTTTAGCTCTAAGGGGGCTGCTGAAGGCTTaGAGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAA | + |
Preference number: 1 (lower is better) Translates to: GGWVGTLALRGLLKA*RTAVRARDLRDGPE Trigger: TTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCTAAAGTACCCACCCACCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR GCA 90 bp | ACAGAAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTaGTGGCTTCCTGTGACTGATAACACTCCCCGCCTTCCCAGCCCG | + |
Preference number: 1 (lower is better) Translates to: TEKAGQRPAFDLTHI*WLPVTDNTPRLPSP Trigger: CGGGCTGGGAAGGCGGGGAGTGTTATCAGTCACAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 90 bp | AGCAGAGATCAGAGAAGCAGCTGTAGAGCTCTAGCCCATTCCAAGTaGCCCGGCCTCTCTAGGCTCCGGGAAAGCAGAACTCGGGACCAA | + |
Preference number: 1 (lower is better) Translates to: SRDQRSSCRALAHSK*PGLSRLRESRTRDQ Trigger: TTGGTCCCGAGTTCTGCTTTCCCGGAGCCTAGAGAGGCCGGGCCACTTGGAATGGGCTAGAGCTCTACAGCTGCTTCTCTGATCTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 90 bp | GAAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTaGCTTCCTGTGACTGATAACACTCCCCGCCTTCCCAGCCCGATC | + |
Preference number: 1 (lower is better) Translates to: EKAGQRPAFDLTHIC*LPVTDNTPRLPSPI Trigger: GATCGGGCTGGGAAGGCGGGGAGTGTTATCAGTCACAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR TCA 90 bp | GACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGTaGCTGATAACACTCCCCGCCTTCCCAGCCCGATCAGTTTCTGTC | + |
Preference number: 1 (lower is better) Translates to: DRDLPLTSPTSAGFL*LITLPAFPARSVSV Trigger: GACAGAAACTGATCGGGCTGGGAAGGCGGGGAGTGTTATCAGTCACAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR GCA 90 bp | CGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTaGCGTGGTGGCTTACTAAGGACCTGGGATGAAAGAGGCACAGAT | + |
Preference number: 1 (lower is better) Translates to: RKEEQCCHGASLCLA*RGGLLRTWDERGTD Trigger: ATCTGTGCCTCTTTCATCCCAGGTCCTTAGTAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 90 bp | GCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTCAGAGATaGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGAAT | + |
Preference number: 1 (lower is better) Translates to: AEGLEDSSEGKRPQR*PRTQARSVSWPSLN Trigger: ATTCAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 90 bp | CTCCGCTTTGAACTAGTTCAGTTTCCACACGGGCGCGCTGGAGCATaGGCCCCTCTAAAACAGTGTCTGGTGGGATCACTACCTAAAGGT | + |
Preference number: 1 (lower is better) Translates to: LRFELVQFPHGRAGA*APLKQCLVGSLPKG Trigger: ACCTTTAGGTAGTGATCCCACCAGACACTGTTTTAGAGGGGCCCATGCTCCAGCGCGCCCGTGTGGAAACTGAACTAGTTCAAAGCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGAGAGGTTCCAGGGACTaGGGTGCTGGGGAGCCCGGC | + |
Preference number: 2 (lower is better) Translates to: RPQRWPRTQARSVSWPSLRGSRD*GAGEPG Trigger: GCCGGGCTCCCCAGCACCCCAGTCCCTGGAACCTCT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGGGGCGAGCTTGTGCTTaGCTTGCCGTGGTGGCTTAC | + |
Preference number: 2 (lower is better) Translates to: GTVSVMAFSECRWKLGDRGRACA*LAVVAY Trigger: GTAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCC...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTGGGCGAGCTTGTGCTTaGCTTGCCGTGGTGGCTTAC | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPGRACA*LAVVAY Trigger: GTAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCC...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGCCAGGGCCATGGAACTaGGGGAGGGCTTGGGGATGC | + |
Preference number: 2 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLPGPWN*GRAWGC Trigger: GCATCCCCAAGCCCTCCCCCAGTTCCATGGCCCTGG...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CAA 90 bp | CCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTaGGCTTGCCGTGGTGGCTTACTAAGGACCTGGGATGAAAGAGGC | + |
Preference number: 2 (lower is better) Translates to: PLRKEEQCCHGASLC*ACRGGLLRTWDERG Trigger: GCCTCTTTCATCCCAGGTCCTTAGTAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTAGAGCAAAGTCCAAGTaGCCCTCTCCTGGCCCCTTC | + |
Preference number: 2 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLRAKSK*PSPGPF Trigger: GAAGGGGCCAGGAGAGGGTCACTTGGACTTTGCTCT...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTTCTGCTGGCTTCCTGTaGCTGATAACACTCCCCGCC | + |
Preference number: 2 (lower is better) Translates to: RTAVRARDLRDGPEHRHGSAGFL*LITLPA Trigger: GGCGGGGAGTGTTATCAGTCACAGGAAGCCAGCAGA...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTGGGGGACAGGCAGGGTaGCACTGTATAGGGACGTTA | + |
Preference number: 2 (lower is better) Translates to: RTAVRARDLRDGPEHRHGGGQAG*HCIGTL Trigger: TAACGTCCCTATACAGTGTCACCCTGCCTGTCCCCC...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTTCTCTAGGACCTGCTTaGGGCTCCTTTAGCAGCCTC | + |
Preference number: 2 (lower is better) Translates to: RTAVRARDLRDGPEHRHGSLGPA*GSFSSL Trigger: GAGGCTGCTAAAGGAGCCTCAAGCAGGTCCTAGAGA...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTGCTTTAGGCCCCTACTaGACTGGAAAGCGAAGGGGA | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPALGPY*TGKRRG Trigger: TCCCCTTCGCTTTCCAGTTCAGTAGGGGCCTAAAGC...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTTGTCATGGCCTTCTCTaGATGCAGGTGGAAGCTGGG | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPCHGLL*MQVEAG Trigger: CCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACA...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTGCCTTCCAGGTCCTCTaGGGAAGGAGGAACAATGCT | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPAFQVL*GRRNNA Trigger: AGCATTGTTCCTCCTTCCGCAGAGGACCTGGAAGGC...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTTCTCGGGCAGAGCTCTaGATCTTCTGGCCTCTGAAC | + |
Preference number: 2 (lower is better) Translates to: RTAVRARDLRDGPEHRHGSRAEL*IFWPLN Trigger: GTTCAGAGGCCAGAAGATGCAGAGCTCTGCCCGAGA...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTAGGCAAGAAGGAAGCTaGCACCAAAGAGCAGGCCAG | + |
Preference number: 2 (lower is better) Translates to: RTAVRARDLRDGPEHRHGRQEGS*HQRAGQ Trigger: CTGGCCTGCTCTTTGGTGCCAGCTTCCTTCTTGCCT...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTATGCACTTGGACCTCTaGAAAGCAAGAGGCCCCTGG | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPMHLDL*KARGPW Trigger: CCAGGGGCCTCTTGCTTTCCAGAGGTCCAAGTGCAT...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTTTCTCTGAATGCAGGTaGAAGCTGGGGGACAGGCAG | + |
Preference number: 2 (lower is better) Translates to: RTAVRARDLRDGPEHRHGFSECR*KLGDRQ Trigger: CTGCCTGTCCCCCAGCTTCCACCTGCATTCAGAGAA...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGCTTTAGGCCCCTACTaGACTGGAAAGCGAAGGGGA | + |
Preference number: 2 (lower is better) Translates to: RPQRWPRTQARSVSWPSLALGPY*TGKRRG Trigger: TCCCCTTCGCTTTCCAGTTCAGTAGGGGCCTAAAGC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTCTCGGGCAGAGCTCTaGATCTTCTGGCCTCTGAAC | + |
Preference number: 2 (lower is better) Translates to: RPQRWPRTQARSVSWPSLSRAEL*IFWPLN Trigger: GTTCAGAGGCCAGAAGATGCAGAGCTCTGCCCGAGA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGAGTTTCTGTCATTCCTaGGGCCAAGAGCCACAAGGT | + |
Preference number: 2 (lower is better) Translates to: GTVSVMAFSECRWKLGDRSFCHS*GQEPQG Trigger: ACCTTGTGGCTCTTGGCCGCAGGAATGACAGAAACT...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGCTCACCCACATCTGCTaGCTTCCTGTGACTGATAAC | + |
Preference number: 2 (lower is better) Translates to: GTVSVMAFSECRWKLGDRLTHIC*LPVTDN Trigger: GTTATCAGTCACAGGAAGCCAGCAGATGTGGGTGAG...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGTGCCGGGGTGGGAGGTaGGGCGGCAAGGACGGTGGG | + |
Preference number: 2 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRCRGGR*GGKDGG Trigger: CCCACCGTCCTTGCCGCCCCACCTCCCACCCCGGCA...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGACTAAGGACCTGGGATaGAAGAGGCACAGATGCAAC | + |
Preference number: 2 (lower is better) Translates to: SSAEGGTMLPWGELVLGLTKDLG*KRHRCN Trigger: GTTGCATCTGTGCCTCTTTCATCCCAGGTCCTTAGT...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTGTCCACCAAGGGGCCTaGGCCAGATATGGTTTAAAT | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPVHQGA*ARYGLN Trigger: ATTTAAACCATATCTGGCTCAGGCCCCTTGGTGGAC...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTGTCCACCAAGGGGCCTaGGCCAGATATGGTTTAAAT | + |
Preference number: 2 (lower is better) Translates to: RTAVRARDLRDGPEHRHGVHQGA*ARYGLN Trigger: ATTTAAACCATATCTGGCTCAGGCCCCTTGGTGGAC...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGAGCACAGGGCCTCTGTaGCGGGGTGGGAGGTGGGGC | + |
Preference number: 2 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRSTGPL*RGGRWG Trigger: GCCCCACCTCCCACCCCGGCACAGAGGCCCTGTGCT...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGGGCTTACTAAGGACCTaGGATGAAAGAGGCACAGAT | + |
Preference number: 2 (lower is better) Translates to: GTVSVMAFSECRWKLGDRGLLRT*DERGTD Trigger: ATCTGTGCCTCTTTCATCCCAGGTCCTTAGTAAGCC...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGATGCACTTGGACCTCTaGAAAGCAAGAGGCCCCTGG | + |
Preference number: 2 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLMHLDL*KARGPW Trigger: CCAGGGGCCTCTTGCTTTCCAGAGGTCCAAGTGCAT...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGACTAAGGACCTGGGATaGAAGAGGCACAGATGCAAC | + |
Preference number: 2 (lower is better) Translates to: RPQRWPRTQARSVSWPSLTKDLG*KRHRCN Trigger: GTTGCATCTGTGCCTCTTTCATCCCAGGTCCTTAGT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCGAACTCCAAACTTCTaGGAAAACTTTGACAGCCCC | + |
Preference number: 2 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLRTPNF*ENFDSP Trigger: GGGGCTGTCAAAGTTTTCTCAGAAGTTTGGAGTTCG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTACTCCCTCGAGCATTTaGAAGTACAGAAAAGGCAGG | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPTPSSI*KYRKGR Trigger: CCTGCCTTTTCTGTACTTTCAAATGCTCGAGGGAGT...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACAGCTTGTGCTTGGCTTaGCGTGGTGGCTTACTAAGG | + |
Preference number: 2 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHSLCLA*RGGLLR Trigger: CCTTAGTAAGCCACCACGGCAAGCCAAGCACAAGCT...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTAGAATTCTGGCCTCTTaGCAACTCCCTCGAGCATTT | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPRILAS*QLPRAF Trigger: AAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCT...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTGGCTTACTAAGGACCTaGGATGAAAGAGGCACAGAT | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPGLLRT*DERGTD Trigger: ATCTGTGCCTCTTTCATCCCAGGTCCTTAGTAAGCC...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGGGACCCCAGGGCCATaGAACTGGGGGAGGGCTTGG | + |
Preference number: 2 (lower is better) Translates to: VKQGALNRKNNKSQAQCVGTPGP*NWGRAW Trigger: CCAAGCCCTCCCCCAGTTCCATGGCCCTGGGGTCCC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR TCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGACTCCCTCGAGCATTTaGAAGTACAGAAAAGGCAGG | + |
Preference number: 2 (lower is better) Translates to: RPQRWPRTQARSVSWPSLTPSSI*KYRKGR Trigger: CCTGCCTTTTCTGTACTTTCAAATGCTCGAGGGAGT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR TCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGCGAACTCCAAACTTCTaGGAAAACTTTGACAGCCCC | + |
Preference number: 2 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLRTPNF*ENFDSP Trigger: GGGGCTGTCAAAGTTTTCTCAGAAGTTTGGAGTTCG...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTGGGATAAATGCACTTaGACCTCTGGAAAGCAAGAG | + |
Preference number: 2 (lower is better) Translates to: RPQRWPRTQARSVSWPSLWDKCT*TSGKQE Trigger: CTCTTGCTTTCCAGAGGTCCAAGTGCATTTATCCCA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR TCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGTGGCACTTTGGGGCTaGGCTGTGAAGGCACGCGTT | + |
Preference number: 2 (lower is better) Translates to: VKQGALNRKNNKSQAQCVVALWG*AVKARV Trigger: AACGCGTGCCTTCACAGCTCAGCCCCAAAGTGCCAC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGTGGGATAAATGCACTTaGACCTCTGGAAAGCAAGAG | + |
Preference number: 2 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLWDKCT*TSGKQE Trigger: CTCTTGCTTTCCAGAGGTCCAAGTGCATTTATCCCA...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR TCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAGCATCTTCTGGCCTCTaGACAGTTCCTCTCCGTGTA | + |
Preference number: 2 (lower is better) Translates to: NPISISNSQRAVGYFRSLASSGL*TVPLRV Trigger: TACACGGAGAGGAACTGTTCAGAGGCCAGAAGATGC...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTAACTGGGGGAGGGCTTaGGGATGCCAAAAAGGTGCC | + |
Preference number: 2 (lower is better) Translates to: VKQGALNRKNNKSQAQCVNWGRA*GCQKGA Trigger: GGCACCTTTTTGGCATCCCCAAGCCCTCCCCCAGTT...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTATTCCAAGCCAAATATaGTTTCTTCAAGCCAGAATC | + |
Preference number: 2 (lower is better) Translates to: RTAVRARDLRDGPEHRHGIPSQI*FLQARI Trigger: GATTCTGGCTTGAAGAAACCATATTTGGCTTGGAAT...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTATTCCAAGCCAAATATaGTTTCTTCAAGCCAGAATC | + |
Preference number: 2 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPIPSQI*FLQARI Trigger: GATTCTGGCTTGAAGAAACCATATTTGGCTTGGAAT...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR TCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGTCTCTAGGACCTGCTTaGGGCTCCTTTAGCAGCCTC | + |
Preference number: 2 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRSLGPA*GSFSSL Trigger: GAGGCTGCTAAAGGAGCCTCAAGCAGGTCCTAGAGA...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR GCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGATGGCCTTCTCTGAATaGAGGTGGAAGCTGGGGGAC | + |
Preference number: 2 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRMAFSE*RWKLGD Trigger: GTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCAT...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTAGGCAAGAAGGAAGCTaGCACCAAAGAGCAGGCCAG | + |
Preference number: 2 (lower is better) Translates to: VKQGALNRKNNKSQAQCVRQEGS*HQRAGQ Trigger: CTGGCCTGCTCTTTGGTGCCAGCTTCCTTCTTGCCT...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR GCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGACCTCACCCACATCTaGTGGCTTCCTGTGACTGAT | + |
Preference number: 2 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRDLTHI*WLPVTD Trigger: ATCAGTCACAGGAAGCCAGCAGATGTGGGTGAGGTC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGACCTCACCCACATCTaGTGGCTTCCTGTGACTGAT | + |
Preference number: 2 (lower is better) Translates to: VKQGALNRKNNKSQAQCVDLTHI*WLPVTD Trigger: ATCAGTCACAGGAAGCCAGCAGATGTGGGTGAGGTC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGCACGGTCAGTGTCATaGCCTTCTCTGAATGCAGGT | + |
Preference number: 2 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRARSVS*PSLNAG Trigger: ACCTGCATTCAGAGAAGGCCATGACACTGACCGTGC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR GCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAAAGCTTGTGCTTGGCTTaGCGTGGTGGCTTACTAAGG | + |
Preference number: 2 (lower is better) Translates to: KTRILASCQLPRAFESTESLCLA*RGGLLR Trigger: CCTTAGTAAGCCACCACGGCAAGCCAAGCACAAGCT...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGAGCTCTGCATCTTCTaGCCTCTGAACAGTTCCTCT | + |
Preference number: 2 (lower is better) Translates to: VKQGALNRKNNKSQAQCVELCIF*PLNSSS Trigger: AGAGGAACTGTTCAGAGGCCAGAAGATGCAGAGCTC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGCTCACCCACATCTGCTaGCTTCCTGTGACTGATAAC | + |
Preference number: 2 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRLTHIC*LPVTDN Trigger: GTTATCAGTCACAGGAAGCCAGCAGATGTGGGTGAG...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR TCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAATGTGAATATCAACATTaGGTGGGGTGCGGTGGGATC | + |
Preference number: 2 (lower is better) Translates to: KTRILASCQLPRAFESTECEYQH*VGCGGI Trigger: GATCCCACCGCACCCCACTCAATGTTGATATTCACA...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGAATATCAACATTGAGTaGGGTGCGGTGGGATCAGCT | + |
Preference number: 2 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRNINIE*GAVGSA Trigger: AGCTGATCCCACCGCACCCCACTCAATGTTGATATT...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAAAAGGTGCCTTATTTTaGGATAAATGCACTTGGACC | + |
Preference number: 2 (lower is better) Translates to: NPISISNSQRAVGYFRSLKGALF*DKCTWT Trigger: GGTCCAAGTGCATTTATCCCAAAATAAGGCACCTTT...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTAAAGGTGCCTTATTTTaGGATAAATGCACTTGGACC | + |
Preference number: 2 (lower is better) Translates to: VKQGALNRKNNKSQAQCVKGALF*DKCTWT Trigger: GGTCCAAGTGCATTTATCCCAAAATAAGGCACCTTT...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR GCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTTTATTTTGGGATAAATaGACTTGGACCTCTGGAAAG | + |
Preference number: 2 (lower is better) Translates to: VKQGALNRKNNKSQAQCVLFWDK*TWTSGK Trigger: CTTTCCAGAGGTCCAAGTGCATTTATCCCAAAATAA...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR GCA 72 bp | GCAATCCCTTTAGACATCATGAGCACAGGGCCTCTGTaGCGGGGTGGGAGGTGGGGCGGCAAGGACGGTGGG | + |
Preference number: 3 (lower is better) Translates to: AIPLDIMSTGPL*RGGRWGGKDGG Trigger: CCCACCGTCCTTGCCGCCCCACCTCCCACCCCGGCACAGAGGCCCTGTGCTCATGATGTCTAAAGGGATTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 72 bp | GACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTaGGGTGCTGGGGAGCCCGGCAATAGGATCCAGCAG | + |
Preference number: 3 (lower is better) Translates to: DPLLAPSRGSRD*GAGEPGNRIQQ Trigger: CTGCTGGATCCTATTGCCGGGCTCCCCAGCACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTGGGGCGAGCTTGTGCTaGGCTTGCCGTGGTGGCTTA | + |
Preference number: 3 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLGASLC*ACRGGL Trigger: TAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCCC...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR GCA 72 bp | AGCCTTCCAGGTCCTCTGCGGAAGGAGGAACAATGCTaGCATGGGGCGAGCTTGTGCTTGGCTTGCCGTGGT | + |
Preference number: 3 (lower is better) Translates to: SLPGPLRKEEQC*HGASLCLACRG Trigger: ACCACGGCAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGACCTGGAAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 72 bp | TCCAGGTCCTCTGCGGAAGGAGGAACAATGCTGCCATaGGGCGAGCTTGTGCTTGGCTTGCCGTGGTGGCTT | + |
Preference number: 3 (lower is better) Translates to: SRSSAEGGTMLP*GELVLGLPWWL Trigger: AAGCCACCACGGCAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGACCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR TCA 72 bp | CACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTaGGGCTCCTTTAGCAGCCTCCGGGACTCAAAGGTA | + |
Preference number: 3 (lower is better) Translates to: HQRAGQASLGPA*GSFSSLRDSKV Trigger: TACCTTTGAGTCCCGGAGGCTGCTAAAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR TCA 72 bp | CTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGTaGCTGATAACACTCCCCGCCTTCCCAGCCCGATCA | + |
Preference number: 3 (lower is better) Translates to: LPLTSPTSAGFL*LITLPAFPARS Trigger: TGATCGGGCTGGGAAGGCGGGGAGTGTTATCAGTCACAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 72 bp | CAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATaGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACA | + |
Preference number: 3 (lower is better) Translates to: QRWPRTQARSVS*PSLNAGGSWGT Trigger: TGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR GCA 72 bp | GCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTaGTGGCTTCCTGTGACTGATAACACTCCCCGCCTT | + |
Preference number: 3 (lower is better) Translates to: AGQRPAFDLTHI*WLPVTDNTPRL Trigger: AAGGCGGGGAGTGTTATCAGTCACAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 72 bp | TTTGTTCTGCAGAGCAAAGTCCAAGTGACCCTCTCCTaGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGCTG | + |
Preference number: 3 (lower is better) Translates to: FVLQSKVQVTLS*PLLEVPGTGVL Trigger: CAGCACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTTGCTCTGCAGAACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CAA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGAGCTTGTGCTTGGCTaGCCGTGGTGGCTTACTAAG | + |
Preference number: 3 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLELVLG*PWWLTK Trigger: CTTAGTAAGCCACCACGGCAAGCCAAGCACAAGCTC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCAAGCAGCAAAGGGGTaGAAAATAGCCCTCCGAGAT | + |
Preference number: 3 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLQAAKG*KIALRD Trigger: ATCTCGGAGGGCTATTTTCAACCCCTTTGCTGCTTG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR TCA 72 bp | GCTCCGGGAAAGCAGAACTCGGGACCAACCAGATACTaGGAGAACTGGATCCTGCAGCCCTTAACACTGTCC | + |
Preference number: 3 (lower is better) Translates to: APGKQNSGPTRY*ENWILQPLTLS Trigger: GGACAGTGTTAAGGGCTGCAGGATCCAGTTCTCTCAGTATCTGGTTGGTCCCGAGTTCTGCTTTCCCGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 72 bp | GAACTAGTTCAGTTTCCACACGGGCGCGCTGGAGCATaGGCCCCTCTAAAACAGTGTCTGGTGGGATCACTA | + |
Preference number: 3 (lower is better) Translates to: ELVQFPHGRAGA*APLKQCLVGSL Trigger: TAGTGATCCCACCAGACACTGTTTTAGAGGGGCCCATGCTCCAGCGCGCCCGTGTGGAAACTGAACTAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CAA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGAACTCCCTCGAGCATTaGAAAGTACAGAAAAGGCAG | + |
Preference number: 3 (lower is better) Translates to: GTVSVMAFSECRWKLGDRNSLEH*KVQKRQ Trigger: CTGCCTTTTCTGTACTTTCAAATGCTCGAGGGAGTT...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CAA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTATGCTAGTCATGAGTTaGTCAAAAGATCTCTCGGGC | + |
Preference number: 3 (lower is better) Translates to: RTAVRARDLRDGPEHRHGMLVMS*SKDLSG Trigger: GCCCGAGAGATCTTTTGACAAACTCATGACTAGCAT...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR CCA 72 bp | TTGTGCTTGGCTTGCCGTGGTGGCTTACTAAGGACCTaGGATGAAAGAGGCACAGATGCAACAGCAGAGATC | + |
Preference number: 3 (lower is better) Translates to: LCLACRGGLLRT*DERGTDATAEI Trigger: GATCTCTGCTGTTGCATCTGTGCCTCTTTCATCCCAGGTCCTTAGTAAGCCACCACGGCAAGCCAAGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CCA 72 bp | TGTCAAAAGATCTCTCGGGCAGAGCTCTGCATCTTCTaGCCTCTGAACAGTTCCTCTCCGTGTAGTAGGCTG | + |
Preference number: 3 (lower is better) Translates to: CQKISRAELCIF*PLNSSSPCSRL Trigger: CAGCCTACTACACGGAGAGGAACTGTTCAGAGGCCAGAAGATGCAGAGCTCTGCCCGAGAGATCTTTTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CAA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGGGGCGAGCTTGTGCTaGGCTTGCCGTGGTGGCTTA | + |
Preference number: 3 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRGASLC*ACRGGL Trigger: TAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCCC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCCCTTAACACTGTCCTaGGCCTTTGTAAATAAAAGA | + |
Preference number: 3 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLPLTLS*AFVNKR Trigger: TCTTTTATTTACAAAGGCCAAGGACAGTGTTAAGGG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CAA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGCCCTTAACACTGTCCTaGGCCTTTGTAAATAAAAGA | + |
Preference number: 3 (lower is better) Translates to: SSAEGGTMLPWGELVLGLPLTLS*AFVNKR Trigger: TCTTTTATTTACAAAGGCCAAGGACAGTGTTAAGGG...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR CCA 72 bp | GGATTAGTTGGTACCACTGAGCAGAGGAGTCTCATGTaGCTGAAGGATCTCATGTGGCTGCTATCACCTGTC | + |
Preference number: 3 (lower is better) Translates to: GLVGTTEQRSLM*LKDLMWLLSPV Trigger: GACAGGTGATAGCAGCCACATGAGATCCTTCAGCCACATGAGACTCCTCTGCTCAGTGGTACCAACTAATCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CAA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAACTTCTGAGAAAACTTaGACAGCCCCAGACGGGCTG | + |
Preference number: 3 (lower is better) Translates to: NPISISNSQRAVGYFRSLTSEKT*TAPDGL Trigger: CAGCCCGTCTGGGGCTGTCAAAGTTTTCTCAGAAGT...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR-3UTR CAA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGAACTCCCTCGAGCATTaGAAAGTACAGAAAAGGCAG | + |
Preference number: 3 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRNSLEH*KVQKRQ Trigger: CTGCCTTTTCTGTACTTTCAAATGCTCGAGGGAGTT...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR TCA 72 bp | CACTGTATAGGGACGTTATTGTCAAACAGGGAGCTCTaGATAGAAAGAACAACAAAAGCCAAGCCCAGTGTG | + |
Preference number: 3 (lower is better) Translates to: HCIGTLLSNREL*IERTTKAKPSV Trigger: CACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGACAATAACGTCCCTATACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR TCA 72 bp | GTGAGCCCCAATAAAAACATTTCAACAGCTGAGGCTTaGGTACTATTGCACTCTTCCTCCTCTGTCTTTAAC | + |
Preference number: 3 (lower is better) Translates to: VSPNKNISTAEA*VLLHSSSSVFN Trigger: GTTAAAGACAGAGGAGGAAGAGTGCAATAGTACTCAAGCCTCAGCTGTTGAAATGTTTTTATTGGGGCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR GCA 72 bp | ATAAAAACATTTCAACAGCTGAGGCTTGAGTACTATTaGACTCTTCCTCCTCTGTCTTTAACATCTGGCACA | + |
Preference number: 3 (lower is better) Translates to: IKTFQQLRLEYY*TLPPLSLTSGT Trigger: TGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAGTACTCAAGCCTCAGCTGTTGAAATGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
3UTR TCA 72 bp | TTTGCCAGTCTAGTAATAAATAATAACCCAGAACAGTaGGCCCCAATAAAAACATTTCAACAGCTGAGGCTT | + |
Preference number: 3 (lower is better) Translates to: FASLVINNNPEQ*APIKTFQQLRL Trigger: AAGCCTCAGCTGTTGAAATGTTTTTATTGGGGCTCACTGTTCTGGGTTATTATTTATTACTAGACTGGCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTTGCAGGGCCAGCTCCTaGTTGGTGCCGGCCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPCRASS*LVPAPG Trigger: CCCTGGGGCCGGCACCAACCAGGAGCTGGCCCTGCA...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR CCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGTGGAGGCCACCCCTGTaGGACCTTCGTGGGCCCCGT | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLWRPPL*DLRGPR Trigger: ACGGGGCCCACGAAGGTCCCACAGGGGTGGCCTCCA...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGCCACAGGCTGGGTGGTaGAGGCCACCCCTGTGGGAC | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLPQAGW*RPPLWD Trigger: GTCCCACAGGGGTGGCCTCCACCACCCAGCCTGTGG...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR CCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCCACAGGCTGGGTGGTaGAGGCCACCCCTGTGGGAC | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLPQAGW*RPPLWD Trigger: GTCCCACAGGGGTGGCCTCCACCACCCAGCCTGTGG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGGTGGGTCTGTCCCAGTaGCCCACCTGGTGCCAGGCC | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVVGLSQ*PTWCQA Trigger: GGCCTGGCACCAGGTGGGCCACTGGGACAGACCCAC...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR CCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGTCCCGGGAACTCGGGTaGACCGCCTGCGGGTCACGA | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVSRELG*TACGSR Trigger: TCGTGACCCGCAGGCGGTCCACCCGAGTTCCCGGGA...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGGGGCCAGCTCCTGGTTaGTGCCGGCCCCAGGGAAAA | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRGPAPG*CRPQGK Trigger: TTTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCC...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR TCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGGCCAGCCACTGTCACTaGTGCCTCCACCTCCGCCAC | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLASHCH*CLHLRH Trigger: GTGGCGGAGGTGGAGGCATCAGTGACAGTGGCTGGC...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGCCCTGCCGGAAGACCTaGCGGTTCACCTGGTGGCCA | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLPCRKT*RFTWWP Trigger: TGGCCACCAGGTGAACCGTCAGGTCTTCCGGCAGGG...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGTGCTGCTGCTGCTTCTaGGGTGGGAAGGAGGCGGTG | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRCCCCF*GGKEAV Trigger: CACCGCCTCCTTCCCACCTCAGAAGCAGCAGCAGCA...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGGCCTGCGGGTCACGATaGCTGACGGCTTGTGCTCGG | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVACGSR*LTACAR Trigger: CCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGC...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGGGCAGGGCTGCCGGTTaGTGTTGCTGCTGCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRGRAAG*CCCCCF Trigger: GAAGCAGCAGCAGCAACAGCAACCGGCAGCCCTGCC...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTAGGGGTAAGGGGCCATaGTGCGGTGAGCCAGGTGGG | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGRGKGP*CGEPGG Trigger: CCCACCTGGCTCACCGCAGCATGGCCCCTTACCCCT...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGGCTTCAGAATGGGGCTaGCCCAGGGTGCCTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVASEWG*PRVPGG Trigger: ACCGCCAGGCACCCTGGGGCAGCCCCATTCTGAAGC...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTGTGGTGGCTGTTCCTTaGCGGCTGGCTCCTGGTCCC | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGVVAVP*RLAPGP Trigger: GGGACCAGGAGCCAGCCGCCAAGGAACAGCCACCAC...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGTCCCAGTGGCCCACCTaGTGCCAGGCCAAAGTCCTG | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRSQWPT*CQAKVL Trigger: CAGGACTTTGGCCTGGCACCAGGTGGGCCACTGGGA...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGCTCCGCTCAGAGGGGTaGTCAGCAAGGCGCACGGGA | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLLRSEG*SARRTG Trigger: TCCCGTGCGCCTTGCTGACCACCCCTCTGAGCGGAG...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGTGGGGTTAGAGGGCTaGGGGCCCTGCCGGAAGACC | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLVGLEG*GPCRKT Trigger: GGTCTTCCGGCAGGGCCCTCAGCCCTCTAACCCCAC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTTGCTGCTGCTGCTTCTaGGGTGGGAAGGAGGCGGTG | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLCCCCF*GGKEAV Trigger: CACCGCCTCCTTCCCACCTCAGAAGCAGCAGCAGCA...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGCCTGCGGGTCACGATaGCTGACGGCTTGTGCTCGG | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLACGSR*LTACAR Trigger: CCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTAGACAGGAGGGGCGATaGAAGTGCCCGCCTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLRQEGR*KCPPWW Trigger: CCACCAAGGCGGGCACTTTCATCGCCCCTCCTGTCT...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGGGCAGGGCTGCCGGTTaGTGTTGCTGCTGCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVGRAAG*CCCCCF Trigger: GAAGCAGCAGCAGCAACAGCAACCGGCAGCCCTGCC...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGCAGTGGCCCACCTGGTaGCAGGCCAAAGTCCTGGTG | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVQWPTW*QAKVLV Trigger: CACCAGGACTTTGGCCTGGCACCAGGTGGGCCACTG...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGTCCGGCCGCGGCCGCTaGTTTGGTTTCCGCATGGAA | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVSGRGR*FGFRME Trigger: TTCCATGCGGAAACCAAAGCAGCGGCCGCGGCCGGA...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTCCAGCTCCTGGTTGGTaGCGGCCCCAGGGAAAATGC | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGPAPGW*RPQGKC Trigger: GCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTGG...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCCAGCTCCTGGTTGGTaGCGGCCCCAGGGAAAATGC | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLPAPGW*RPQGKC Trigger: GCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTGG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTTCCAGGCCCCGCCCTaGAGCCATCACAGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLFQAPP*SHHRAG Trigger: CCCAGCTCTGTGATGGCTCCAGGGCGGGGCCTGGAA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTGAGTTCAAGGGTGCTTaGGGCCTCCCCACCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPEFKGA*GLPTSS Trigger: GCTGGAGGTGGGGAGGCCCCAAGCACCCTTGAACTC...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTTCCCAGTGGCCCACCTaGTGCCAGGCCAAAGTCCTG | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGSQWPT*CQAKVL Trigger: CAGGACTTTGGCCTGGCACCAGGTGGGCCACTGGGA...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGTCAGCACCTCCGACTTaGGCCACCTCAGTTGGACCC | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRSAPPT*ATSVGP Trigger: GGGTCCAACTGAGGTGGCCCAAGTCGGAGGTGCTGA...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTCCGCGGCCGCTGCTTTaGTTTCCGCATGGAAGGCTC | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGPRPLL*FPHGRL Trigger: GAGCCTTCCATGCGGAAACCAAAGCAGCGGCCGCGG...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGGGCCAGCTCCTGGTTaGTGCCGGCCCCAGGGAAAA | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLGPAPG*CRPQGK Trigger: TTTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGGGCTTCTCTGAGGTCTaGATACCTGCAGACCCCGGG | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRGFSEV*IPADPG Trigger: CCCGGGGTCTGCAGGTATCCAGACCTCAGAGAAGCC...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGAGACAGGAGGGGCGATaGAAGTGCCCGCCTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLRQEGR*KCPPWW Trigger: CCACCAAGGCGGGCACTTTCATCGCCCCTCCTGTCT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGCTCCCTCGGCTTCTCTaGGGTCTGGATACCTGCAGA | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRLPRLL*GLDTCR Trigger: TCTGCAGGTATCCAGACCTCAGAGAAGCCGAGGGAG...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGCATCTGGGGCAGGGCTaGCGGTTGCTGTTGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLHLGQG*RLLLLL Trigger: CAGCAGCAACAGCAACCGGCAGCCCTGCCCCAGATG...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTGTCCCCGAGGCCCCCTaGTCTCATGACCTCCTCATT | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGVPEAP*SHDLLI Trigger: AATGAGGAGGTCATGAGAGCAGGGGGCCTCGGGGAC...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGGTCTTCAGCCTGAGCTaGAGCATCTGTCCCGGGAAC | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRVFSLS*SICPGN Trigger: GTTCCCGGGACAGATGCTGCAGCTCAGGCTGAAGAC...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTTTGGCGGCTGGCTCCTaGTCCCCAAAAGGACAACGC | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLLAAGS*SPKGQR Trigger: GCGTTGTCCTTTTGGGGACCAGGAGCCAGCCGCCAA...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTCTGTTCCTTGGCGGCTaGCTCCTGGTCCCCAAAAGG | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPLFLGG*LLVPKR Trigger: CCTTTTGGGGACCAGGAGCCAGCCGCCAAGGAACAG...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTAGGTACCCCCACACCTaGATGAGGGCTCCCTTTGGG | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGRYPHT*MRAPFG Trigger: CCCAAAGGGAGCCCTCATCCAGGTGTGGGGGTACCT...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTAGGTACCCCCACACCTaGATGAGGGCTCCCTTTGGG | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPRYPHT*MRAPFG Trigger: CCCAAAGGGAGCCCTCATCCAGGTGTGGGGGTACCT...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTCTGCTGCTTCTGAGGTaGGAAGGAGGCGGTGGGGTT | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGLLLLR*EGGGGV Trigger: AACCCCACCGCCTCCTTCCCACCTCAGAAGCAGCAG...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGGCTCCTGCCCAGGTTaGGTGCCAGCTCCATCGAGG | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLGSCPG*VPAPSR Trigger: CCTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGCCGCGGCCGCTGCTTTaGTTTCCGCATGGAAGGCTC | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLPRPLL*FPHGRL Trigger: GAGCCTTCCATGCGGAAACCAAAGCAGCGGCCGCGG...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGTCGATGGGCACTCTTTaGCGTGATAGGAGGAGGGGC | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRSMGTL*RDRRRG Trigger: GCCCCTCCTCCTATCACGCCAAAGAGTGCCCATCGA...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGCAGACCCCGGGGCGTTaGGCTCATGGCTCCGGAGAA | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLQTPGR*AHGSGE Trigger: TTCTCCGGAGCCATGAGCCCAACGCCCCGGGGTCTG...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACCAGACCCCGGGGCGTTaGGCTCATGGCTCCGGAGAA | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHQTPGR*AHGSGE Trigger: TTCTCCGGAGCCATGAGCCCAACGCCCCGGGGTCTG...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGCACCTGGTGGCCAAATaGCAGCTGGAAGGGTTGCAA | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRHLVAK*QLEGLQ Trigger: TTGCAACCCTTCCAGCTGGCATTTGGCCACCAGGTG...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGTCCCCGAGGCCCCCTaGTCTCATGACCTCCTCATT | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLVPEAP*SHDLLI Trigger: AATGAGGAGGTCATGAGAGCAGGGGGCCTCGGGGAC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTGTCTTCAGCCTGAGCTaGAGCATCTGTCCCGGGAAC | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLVFSLS*SICPGN Trigger: GTTCCCGGGACAGATGCTGCAGCTCAGGCTGAAGAC...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTCATCATGGGGATTTCTaGCTGGAACCGGGTCCCGAC | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGHHGDF*LEPGPD Trigger: GTCGGGACCCGGTTCCAGGCAGAAATCCCCATGATG...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTCATCATGGGGATTTCTaGCTGGAACCGGGTCCCGAC | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPHHGDF*LEPGPD Trigger: GTCGGGACCCGGTTCCAGGCAGAAATCCCCATGATG...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGACTCTGCAGTGGTGGTaGCTGTTCCTTGGCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLTLQWW*LFLGGW Trigger: CCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTCTTACTTGGGCCTGCTaGGACAACATGGCTGCCGTG | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGLTWAC*DNMAAV Trigger: CACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAG...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGAGTTCAAGGGTGCTTaGGGCCTCCCCACCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLEFKGA*GLPTSS Trigger: GCTGGAGGTGGGGAGGCCCCAAGCACCCTTGAACTC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGACGGCTTGTGCTCGGTaGGGTACTGCTCAAGACCAG | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLTACAR*GTAQDQ Trigger: CTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGT...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTTCGATGGGCACTCTTTaGCGTGATAGGAGGAGGGGC | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPSMGTL*RDRRRG Trigger: GCCCCTCCTCCTATCACGCCAAAGAGTGCCCATCGA...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTTTGGGGACTCTCTTCTaGGAGGAGGCACCCTTGGGA | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGLGTLF*EEAPLG Trigger: TCCCAAGGGTGCCTCCTCCCAGAAGAGAGTCCCCAA...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACAAGGCCATCTGGGGCTaGGGTAGCACGGGCTGTGAA | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHKAIWG*GSTGCE Trigger: TTCACAGCCCGTGCTACCTCAGCCCCAGATGGCCTT...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGCCCAGGGAAAATGCTTaGACAGGCAGCTGTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLPRENA*TGSCQQ Trigger: CTGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGG...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTTGGCAATGCCCTTGTTaGACAGCTTCCTCTCAGCCG | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPWQCPC*TASSQP Trigger: CGGCTGAGAGGAAGCTGTTCAACAAGGGCATTGCCA...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGTGGCAATGCCCTTGTTaGACAGCTTCCTCTCAGCCG | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVWQCPC*TASSQP Trigger: CGGCTGAGAGGAAGCTGTTCAACAAGGGCATTGCCA...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTCACCTGGTGGCCAAATaGCAGCTGGAAGGGTTGCAA | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPHLVAK*QLEGLQ Trigger: TTGCAACCCTTCCAGCTGGCATTTGGCCACCAGGTG...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGTTGGCGGCTGGCTCCTaGTCCCCAAAAGGACAACGC | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLLAAGS*SPKGQR Trigger: GCGTTGTCCTTTTGGGGACCAGGAGCCAGCCGCCAA...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTCTGAGGGACTGTGGTaGACTCTGCAGTGGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLSEGLW*TLQWWW Trigger: CCACCACCACTGCAGAGTCCACCACAGTCCCTCAGA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTGGGCAGTGTCTGGTTTaGGGGTTTCTTGGCTGCATG | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPGQCLV*GFLGCM Trigger: CATGCAGCCAAGAAACCCCCAAACCAGACACTGCCC...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGCTGCTGCTTCTGAGGTaGGAAGGAGGCGGTGGGGTT | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLLLLLR*EGGGGV Trigger: AACCCCACCGCCTCCTTCCCACCTCAGAAGCAGCAG...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGCAGAATTCCCTCCTTaGAGAGACGGCGGGAGCGAC | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLAEFPP*RDGGSD Trigger: GTCGCTCCCGCCGTCTCTCCAAGGAGGGAATTCTGC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGCACACCTGGAAGTTGTaGCCAACACGCTTTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: GTVSVMAFSECRWKLGDRHTWKL*PTRFSA Trigger: AGCGGAAAAGCGTGTTGGCCACAACTTCCAGGTGTG...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACTCAGCACCTCCGACTTaGGCCACCTCAGTTGGACCC | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHSAPPT*ATSVGP Trigger: GGGTCCAACTGAGGTGGCCCAAGTCGGAGGTGCTGA...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGCGATGCTCACAGGGGTaGCCTCCCCCATCACAGAGA | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLRCSQG*PPPSQR Trigger: TCTCTGTGATGGGGGAGGCCACCCCTGTGAGCATCG...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGCTCCCCTTCCAACTTaGCGTTCAGGTCTTCAGCCT | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLAPLPT*RSGLQP Trigger: AGGCTGAAGACCTGAACGTCAAGTTGGAAGGGGAGC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGGCTCTGGTAAGGGGTaGTGTTGGAGTAGACAGGAG | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLGSGKG*CWSRQE Trigger: CTCCTGTCTACTCCAACATCACCCCTTACCAGAGCC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACCTCCCTCGGCTTCTCTaGGGTCTGGATACCTGCAGA | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHLPRLL*GLDTCR Trigger: TCTGCAGGTATCCAGACCTCAGAGAAGCCGAGGGAG...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACTGTGAAGCAGGGTCCTaGAGGAGAGCCTTGCGCAGT | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHCEAGS*RRALRS Trigger: ACTGCGCAAGGCTCTCCTGCAGGACCCTGCTTCACA...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACTGGTGGACTCTGCAGTaGTGGTGGCTGTTCCTTGGC | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHWWTLQ*WWLFLG Trigger: GCCAAGGAACAGCCACCACCACTGCAGAGTCCACCA...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAGAGTGGGGTGGGGGCTaGCCAGGTTGCTGCTGCCAG | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLEWGGG*PGCCCQ Trigger: CTGGCAGCAGCAACCTGGCCAGCCCCCACCCCACTC...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCACACCTGGAAGTTGTaGCCAACACGCTTTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLHTWKL*PTRFSA Trigger: AGCGGAAAAGCGTGTTGGCCACAACTTCCAGGTGTG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACATGGGGATTTCTGCCTaGAACCGGGTCCCGACGTTG | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHMGISA*NRVPTL Trigger: CAACGTCGGGACCCGGTTCCAGGCAGAAATCCCCAT...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCTCGGTCTCTCATCATaGGGATTTCTGCCTGGAACC | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLLGLSS*GFLPGT Trigger: GGTTCCAGGCAGAAATCCCCATGATGAGAGACCGAG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CAA 72 bp | AAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTaGGCTTGCCGTGGTGGCTTACTAAGGACCTGGGAT | + |
Preference number: 4 (lower is better) Translates to: KEEQCCHGASLC*ACRGGLLRTWD Trigger: ATCCCAGGTCCTTAGTAAGCCACCACGGCAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACGCTCCCCTTCCAACTTaGCGTTCAGGTCTTCAGCCT | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHAPLPT*RSGLQP Trigger: AGGCTGAAGACCTGAACGTCAAGTTGGAAGGGGAGC...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTACCCTTGGGAACTTCTaGGAAGTCTTAACGTCCACC | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPTLGNF*EVLTST Trigger: GGTGGACGTTAAGACTTCTCAGAAGTTCCCAAGGGT...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGCCAGCTGGAAGGGTTaGAAGGGCAGTGTCTGGTTT | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLASWKG*KGSVWF Trigger: AAACCAGACACTGCCCTTGCAACCCTTCCAGCTGGC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGTCTGCTTCTCCCAGCTaGTCTCAAGATGTTCCCATG | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVSASPS*SQDVPM Trigger: CATGGGAACATCTTGAGAGCAGCTGGGAGAAGCAGA...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACCGGCCCCAGGGAAAATaGTTGAACAGGCAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHRPQGK*LNRQLS Trigger: TGACAGCTGCCTGTTCAAGCATTTTCCCTGGGGCCG...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGCGGCCCCAGGGAAAATaGTTGAACAGGCAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLRPQGK*LNRQLS Trigger: TGACAGCTGCCTGTTCAAGCATTTTCCCTGGGGCCG...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGTTTACCGAGCTTACTTaGGCCTGCTGGGACAACATG | + |
Preference number: 4 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVFTELT*ACWDNM Trigger: CATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAA...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTTTTACCGAGCTTACTTaGGCCTGCTGGGACAACATG | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLFTELT*ACWDNM Trigger: CATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAA...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGGGCAGTGTCTGGTTTaGGGGTTTCTTGGCTGCATG | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLGQCLV*GFLGCM Trigger: CATGCAGCCAAGAAACCCCCAAACCAGACACTGCCC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTGCAAGGGCAGTGTCTaGTTTGGGGGTTTCTTGGCT | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLCKGSV*FGGFLA Trigger: AGCCAAGAAACCCCCAAACCAGACACTGCCCTTGCA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTAGCCTTGCGCAGTTCTaGGTTCATATCTGGGTTGTG | + |
Preference number: 4 (lower is better) Translates to: RTAVRARDLRDGPEHRHGSLAQF*VHIWVV Trigger: CACAACCCAGATATGAACCCAGAACTGCGCAAGGCT...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACAGCAAATTAGCCTCCTaGGACACCCTGCGTCTCCGT | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHSKLAS*DTLRLR Trigger: ACGGAGACGCAGGGTGTCCCAGGAGGCTAATTTGCT...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTTGCAGGGCCAGCTCCTaGTTGGTGCCGGCCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVCRASS*LVPAPG Trigger: CCCTGGGGCCGGCACCAACCAGGAGCTGGCCCTGCA...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGACCTCAACCTCCTCTTaGCCTGACTTCTCGTCACCG | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLTSTSS*PDFSSP Trigger: CGGTGACGAGAAGTCAGGCCAAGAGGAGGTTGAGGT...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCAAAAGGACAACGCTTaGGTTTACTCTGAGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLQKDNA*VYSEPW Trigger: CCAAGGCTCAGAGTAAACGCAAGCGTTGTCCTTTTG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTTTTGTTCCCCTTCAGTaGCTCCGGGTGGTTATAGTA | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPFVPLQ*LRVVIV Trigger: TACTATAACCACCCGGAGGCACTGAAGGGGAACAAA...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTATCCGGCCGCGGCCGCTaGTTTGGTTTCCGCATGGAA | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLSGRGR*FGFRME Trigger: TTCCATGCGGAAACCAAAGCAGCGGCCGCGGCCGGA...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGAGATGTTCCCATGGCTaGCACACCAAGTCAGCCTTA | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLRCSHG*HTKSAL Trigger: TAAGGCTGACTTGGTGTGGCAGCCATGGGAACATCT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTATCACGCCCCTCCTCCTaGTCTCCCTTCTCCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLSRPSS*SPFSWV Trigger: CACCCAGGAGAAGGGAGAGCAGGAGGAGGGGCGTGA...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTCTTCTTCTCTTGCTCTaGGTGACTCTTCATGTGAGC | + |
Preference number: 4 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPLLLLL*VTLHVS Trigger: GCTCACATGAAGAGTCACGCAGAGCAAGAGAAGAAG...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGTTTACTCTGAGCCTTaGACTGGGCCTGGAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLVYSEP*TGPGGS Trigger: TGAACCTCCAGGCCCAGTCCAAGGCTCAGAGTAAAC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACGTTTACTCTGAGCCTTaGACTGGGCCTGGAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHVYSEP*TGPGGS Trigger: TGAACCTCCAGGCCCAGTCCAAGGCTCAGAGTAAAC...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGTGGAGGCCACCCCTGTaGGACCTTCGTGGGCCCCGT | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRWRPPL*DLRGPR Trigger: ACGGGGCCCACGAAGGTCCCACAGGGGTGGCCTCCA...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGACAACATGGCTGCCGTaGTCCTCTCAGATCCATACA | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLTTWLP*SSQIHT Trigger: TGTATGGATCTGAGAGGACCACGGCAGCCATGTTGT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGAGTGGGGTGGGGGCTaGCCAGGTTGCTGCTGCCAG | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVEWGGG*PGCCCQ Trigger: CTGGCAGCAGCAACCTGGCCAGCCCCCACCCCACTC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTGGTTTGGGGGTTTCTTaGCTGCATGGAAAGAGTTCA | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLGLGVS*LHGKSS Trigger: TGAACTCTTTCCATGCAGCCAAGAAACCCCCAAACC...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGGGTTTGGGGGTTTCTTaGCTGCATGGAAAGAGTTCA | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLGLGVS*LHGKSS Trigger: TGAACTCTTTCCATGCAGCCAAGAAACCCCCAAACC...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGTGGGTCTGTCCCAGTaGCCCACCTGGTGCCAGGCC | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRVGLSQ*PTWCQA Trigger: GGCCTGGCACCAGGTGGGCCACTGGGACAGACCCAC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGCAGGGTGCCTGGCGGTaGCTGCGGCAGAGACCAGTG | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRQGAWR*LRQRPV Trigger: CACTGGTCTCTGCCGCAGCCACCGCCAGGCACCCTG...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTCAGGGTGCCTGGCGGTaGCTGCGGCAGAGACCAGTG | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVQGAWR*LRQRPV Trigger: CACTGGTCTCTGCCGCAGCCACCGCCAGGCACCCTG...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGACCAAGTCAGCCTTATaGGGGTCAAAAGCTGCCAGC | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLTKSAL*GSKAAS Trigger: GCTGGCAGCTTTTGACCCCCATAAGGCTGACTTGGT...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACACCAAGTCAGCCTTATaGGGGTCAAAAGCTGCCAGC | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHTKSAL*GSKAAS Trigger: GCTGGCAGCTTTTGACCCCCATAAGGCTGACTTGGT...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGCCAGCCACTGTCACTaGTGCCTCCACCTCCGCCAC | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRASHCH*CLHLRH Trigger: GTGGCGGAGGTGGAGGCATCAGTGACAGTGGCTGGC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTCCCTGCCGGAAGACCTaGCGGTTCACCTGGTGGCCA | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVPCRKT*RFTWWP Trigger: TGGCCACCAGGTGAACCGTCAGGTCTTCCGGCAGGG...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGCGGGTCACGATGACTaGCGGCTTGTGCTCGGTGGG | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRAGHDD*RLVLGG Trigger: CCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTCGGGATGTTGCTGGTTaGTATGATGGCATTGAAGTA | + |
Preference number: 4 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLRDVAG*YDGIEV Trigger: TACTTCAATGCCATCATATCAACCAGCAACATCCCG...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGCAAAAGGACAACGCTTaGGTTTACTCTGAGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLQKDNA*VYSEPW Trigger: CCAAGGCTCAGAGTAAACGCAAGCGTTGTCCTTTTG...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGCTTCAGAATGGGGCTaGCCCAGGGTGCCTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVASEWG*PRVPGG Trigger: ACCGCCAGGCACCCTGGGGCAGCCCCATTCTGAAGC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACAGATGTTCCCATGGCTaGCACACCAAGTCAGCCTTA | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHRCSHG*HTKSAL Trigger: TAAGGCTGACTTGGTGTGGCAGCCATGGGAACATCT...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGTCTTCATGTGAGCACTaGGGCTCTTCACCTTGTAAA | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLSSCEH*GSSPCK Trigger: TTTACAAGGTGAAGAGCCGCAGTGCTCACATGAAGA...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGCTTCTTCTCTTGCTCTaGGTGACTCTTCATGTGAGC | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLLLLLL*VTLHVS Trigger: GCTCACATGAAGAGTCACGCAGAGCAAGAGAAGAAG...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGTGGTGGCTGTTCCTTaGCGGCTGGCTCCTGGTCCC | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVVVAVP*RLAPGP Trigger: GGGACCAGGAGCCAGCCGCCAAGGAACAGCCACCAC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGGTTTCTTGGCTGCATaGAAAGAGTTCAAGGGTGCT | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLGFLAA*KEFKGA Trigger: AGCACCCTTGAACTCTTTCCATGCAGCCAAGAAACC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGTTCTGGGTTCATATCTaGGTTGTGGGAAAAGGGGTA | + |
Preference number: 4 (lower is better) Translates to: SSAEGGTMLPWGELVLGLFWVHI*VVGKGV Trigger: TACCCCTTTTCCCACAACCCAGATATGAACCCAGAA...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAGCAGAATTCCCTCCTTaGAGAGACGGCGGGAGCGAC | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLAEFPP*RDGGSD Trigger: GTCGCTCCCGCCGTCTCTCCAAGGAGGGAATTCTGC...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGGCTCCTGCCCAGGTTaGGTGCCAGCTCCATCGAGG | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRGSCPG*VPAPSR Trigger: CCTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAATCCCGGGAACTCGGGTaGACCGCCTGCGGGTCACGA | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTESRELG*TACGSR Trigger: TCGTGACCCGCAGGCGGTCCACCCGAGTTCCCGGGA...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGCTCCGCTCAGAGGGGTaGTCAGCAAGGCGCACGGGA | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRLRSEG*SARRTG Trigger: TCCCGTGCGCCTTGCTGACCACCCCTCTGAGCGGAG...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR GCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTCATCTGGGGCAGGGCTaGCGGTTGCTGTTGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVHLGQG*RLLLLL Trigger: CAGCAGCAACAGCAACCGGCAGCCCTGCCCCAGATG...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR GCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTCAGTGGCCCACCTGGTaGCAGGCCAAAGTCCTGGTG | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVQWPTW*QAKVLV Trigger: CACCAGGACTTTGGCCTGGCACCAGGTGGGCCACTG...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR GCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGGTAAGGGGCCATGCTaGGGTGAGCCAGGTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVGKGPC*GEPGGS Trigger: AGACCCACCTGGCTCACCGCAGCATGGCCCCTTACC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR GCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGTCTGGATCAGCTTCTaGACCAGGAAGAAATCTTTC | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLVWISF*TRKKSF Trigger: GAAAGATTTCTTCCTGGTGCAGAAGCTGATCCAGAC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR GCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGTCACGCCCCTCCTCCTaGTCTCCCTTCTCCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRSRPSS*SPFSWV Trigger: CACCCAGGAGAAGGGAGAGCAGGAGGAGGGGCGTGA...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR GCA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTCTTCATGTGAGCACTaGGGCTCTTCACCTTGTAAA | + |
Preference number: 4 (lower is better) Translates to: RPQRWPRTQARSVSWPSLSSCEH*GSSPCK Trigger: TTTACAAGGTGAAGAGCCGCAGTGCTCACATGAAGA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR CCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTATGGTGGACTCTGCAGTaGTGGTGGCTGTTCCTTGGC | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLWWTLQ*WWLFLG Trigger: GCCAAGGAACAGCCACCACCACTGCAGAGTCCACCA...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAATTCCAGGCCCCGCCCTaGAGCCATCACAGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTEFQAPP*SHHRAG Trigger: CCCAGCTCTGTGATGGCTCCAGGGCGGGGCCTGGAA...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR CCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAACGGCTTGTGCTCGGTaGGGTACTGCTCAAGACCAG | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLTACAR*GTAQDQ Trigger: CTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGT...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTATTGGGGACTCTCTTCTaGGAGGAGGCACCCTTGGGA | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLLGTLF*EEAPLG Trigger: TCCCAAGGGTGCCTCCTCCCAGAAGAGAGTCCCCAA...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR TCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTAAGGCCATCTGGGGCTaGGGTAGCACGGGCTGTGAA | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVKAIWG*GSTGCE Trigger: TTCACAGCCCGTGCTACCTCAGCCCCAGATGGCCTT...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACCGGGATGTTGCTGGTTaGTATGATGGCATTGAAGTA | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHRDVAG*YDGIEV Trigger: TACTTCAATGCCATCATATCAACCAGCAACATCCCG...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR TCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTACCCAGGGAAAATGCTTaGACAGGCAGCTGTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLPRENA*TGSCQQ Trigger: CTGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGG...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAAGGTAAGGGGCCATGCTaGGGTGAGCCAGGTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTEGKGPC*GEPGGS Trigger: AGACCCACCTGGCTCACCGCAGCATGGCCCCTTACC...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTACTCTGCAGTGGTGGTaGCTGTTCCTTGGCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVTLQWW*LFLGGW Trigger: CCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGT...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGTTCTGGGTTCATATCTaGGTTGTGGGAAAAGGGGTA | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLFWVHI*VVGKGV Trigger: TACCCCTTTTCCCACAACCCAGATATGAACCCAGAA...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGGCTTCTCTGAGGTCTaGATACCTGCAGACCCCGGG | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRGFSEV*IPADPG Trigger: CCCGGGGTCTGCAGGTATCCAGACCTCAGAGAAGCC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTTGTGAAGCAGGGTCCTaGAGGAGAGCCTTGCGCAGT | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVCEAGS*RRALRS Trigger: ACTGCGCAAGGCTCTCCTGCAGGACCCTGCTTCACA...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGCTTACTTGGGCCTGCTaGGACAACATGGCTGCCGTG | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRLTWAC*DNMAAV Trigger: CACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAG...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTATGCAAGGGCAGTGTCTaGTTTGGGGGTTTCTTGGCT | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLCKGSV*FGGFLA Trigger: AGCCAAGAAACCCCCAAACCAGACACTGCCCTTGCA...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTATGGGGATTTCTGCCTaGAACCGGGTCCCGACGTTG | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVMGISA*NRVPTL Trigger: CAACGTCGGGACCCGGTTCCAGGCAGAAATCCCCAT...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CAA 72 bp | AGAGCAGGGCACGAACTCCAAACTTCTGAGAAAACTTaGACAGCCCCAGACGGGCTGTTAACAAGCAGCAAA | + |
Preference number: 4 (lower is better) Translates to: RAGHELQTSEKT*TAPDGLLTSSK Trigger: TTTGCTGCTTGTTAACAGCCCGTCTGGGGCTGTCAAAGTTTTCTCAGAAGTTTGGAGTTCGTGCCCTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CAA 72 bp | CTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTaGAAAGTACAGAAAAGGCAGGACAGAGACCTGCCT | + |
Preference number: 4 (lower is better) Translates to: LEFWPLANSLEH*KVQKRQDRDLP Trigger: AGGCAGGTCTCTGTCCTGCCTTTTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGTGGCCAAATGCCAGCTaGAAGGGTTGCAAGGGCAGT | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRWPNAS*KGCKGS Trigger: ACTGCCCTTGCAACCCTTCCAGCTGGCATTTGGCCA...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGAAGGCAGTTGATGCATaGGGTAGTAGTTCTCAAATA | + |
Preference number: 4 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLKAVDA*GSSSQI Trigger: TATTTGAGAACTACTACCCCATGCATCAACTGCCTT...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTAGCAAATTAGCCTCCTaGGACACCCTGCGTCTCCGT | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVSKLAS*DTLRLR Trigger: ACGGAGACGCAGGGTGTCCCAGGAGGCTAATTTGCT...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGACCTCAACCTCCTCTTaGCCTGACTTCTCGTCACCG | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRTSTSS*PDFSSP Trigger: CGGTGACGAGAAGTCAGGCCAAGAGGAGGTTGAGGT...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTCAGCCTCTCTTCACTTaGGGACTCTCTTCTGGGAGG | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVQPLFT*GLSSGR Trigger: CCTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTG...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACGGGAAGGTGTTCTCCTaGTTCTGGGTTTTATTAAAT | + |
Preference number: 4 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHGKVFS*FWVLLN Trigger: ATTTAATAAAACCCAGAACCAGGAGAACACCTTCCC...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAAGGCTCTGGTAAGGGGTaGTGTTGGAGTAGACAGGAG | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTEGSGKG*CWSRQE Trigger: CTCCTGTCTACTCCAACATCACCCCTTACCAGAGCC...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAGGTTTCTTGGCTGCATaGAAAGAGTTCAAGGGTGCT | + |
Preference number: 4 (lower is better) Translates to: NPISISNSQRAVGYFRSLGFLAA*KEFKGA Trigger: AGCACCCTTGAACTCTTTCCATGCAGCCAAGAAACC...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAATGGCCAAATGCCAGCTaGAAGGGTTGCAAGGGCAGT | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTEWPNAS*KGCKGS Trigger: ACTGCCCTTGCAACCCTTCCAGCTGGCATTTGGCCA...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGCTCAAGATGTTCCCATaGCTGCCACACCAAGTCAGC | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRLKMFP*LPHQVS Trigger: GCTGACTTGGTGTGGCAGCCATGGGAACATCTTGAG...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAACAGCCTCTCTTCACTTaGGGACTCTCTTCTGGGAGG | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTEQPLFT*GLSSGR Trigger: CCTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTG...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR TCA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTACCCTTGGGAACTTCTaGGAAGTCTTAACGTCCACC | + |
Preference number: 4 (lower is better) Translates to: VKQGALNRKNNKSQAQCVTLGNF*EVLTST Trigger: GGTGGACGTTAAGACTTCTCAGAAGTTCCCAAGGGT...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAAGAGCCATCACAGAGCTaGGCCACTTTACCGAGCTTA | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTEEPSQS*ATLPSL Trigger: TAAGCTCGGTAAAGTGGCCCAGCTCTGTGATGGCTC...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGAGCCTTGCGCAGTTCTaGGTTCATATCTGGGTTGTG | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRSLAQF*VHIWVV Trigger: CACAACCCAGATATGAACCCAGAACTGCGCAAGGCT...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAACTCAAGATGTTCCCATaGCTGCCACACCAAGTCAGC | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTELKMFP*LPHQVS Trigger: GCTGACTTGGTGTGGCAGCCATGGGAACATCTTGAG...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR CCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAAACAACATGGCTGCCGTaGTCCTCTCAGATCCATACA | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTETTWLP*SSQIHT Trigger: TGTATGGATCTGAGAGGACCACGGCAGCCATGTTGT...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR GCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAATTTGTTCCCCTTCAGTaGCTCCGGGTGGTTATAGTA | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTEFVPLQ*LRVVIV Trigger: TACTATAACCACCCGGAGGCACTGAAGGGGAACAAA...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR GCA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGTCTGGATCAGCTTCTaGACCAGGAAGAAATCTTTC | + |
Preference number: 4 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRVWISF*TRKKSF Trigger: GAAAGATTTCTTCCTGGTGCAGAAGCTGATCCAGAC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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3UTR CAA 72 bp | TCCGGGACTCAAAGGTATAAAATGCTAGTCATGAGTTaGTCAAAAGATCTCTCGGGCAGAGCTCTGCATCTT | + |
Preference number: 4 (lower is better) Translates to: SGTQRYKMLVMS*SKDLSGRALHL Trigger: AAGATGCAGAGCTCTGCCCGAGAGATCTTTTGACAAACTCATGACTAGCATTTTATACCTTTGAGTCCCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
||
CDS-3UTR CCA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAAGGGAAGGTGTTCTCCTaGTTCTGGGTTTTATTAAAT | + |
Preference number: 4 (lower is better) Translates to: KTRILASCQLPRAFESTEGKVFS*FWVLLN Trigger: ATTTAATAAAACCCAGAACCAGGAGAACACCTTCCC...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS CCA 90 bp | GCCCGCCGGCAGCGCTCACGCCCCTCCTCCTGCTCTCCCTTCTCCTaGGTGTCTGGCACCTCCTCCTCCCCCTCCTTCCTGGGTTCTGTC | + |
Preference number: 5 (lower is better) Translates to: ARRQRSRPSSCSPFS*VSGTSSSPSFLGSV Trigger: GACAGAACCCAGGAAGGAGGGGGAGGAGGAGGTGCCAGACACCCAGGAGAAGGGAGAGCAGGAGGAGGGGCGTGAGCGCTGCCGGCGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 90 bp | GGCTGCCCCAGGGTGCCTGGCGGTGGCTGCGGCAGAGACCAGTGGTaGAGGAACAGATTGCTCGCGGGCTCCTGCCCAGGTTGGGTGCCA | + |
Preference number: 5 (lower is better) Translates to: GCPRVPGGGCGRDQW*RNRLLAGSCPGWVP Trigger: TGGCACCCAACCTGGGCAGGAGCCCGCGAGCAATCTGTTCCTTCACCACTGGTCTCTGCCGCAGCCACCGCCAGGCACCCTGGGGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | TGCCTGGCGGTGGCTGCGGCAGAGACCAGTGGTGAAGGAACAGATTaGTCGCGGGCTCCTGCCCAGGTTGGGTGCCAGCTCCATCGAGGG | + |
Preference number: 5 (lower is better) Translates to: CLAVAAAETSGEGTD*SRAPAQVGCQLHRG Trigger: CCCTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCCCGCGAGCAATCTGTTCCTTCACCACTGGTCTCTGCCGCAGCCACCGCCAGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | GGGGTAAGGGGCCATGCTGCGGTGAGCCAGGTGGGTCTGTCCCAGTaGCCCACCTGGTGCCAGGCCAAAGTCCTGGTGCTGTTGCGAAGG | + |
Preference number: 5 (lower is better) Translates to: GVRGHAAVSQVGLSQ*PTWCQAKVLVLLRR Trigger: CCTTCGCAACAGCACCAGGACTTTGGCCTGGCACCAGGTGGGCCACTGGGACAGACCCACCTGGCTCACCGCAGCATGGCCCCTTACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | TCGCGGGCTCCTGCCCAGGTTGGGTGCCAGCTCCATCGAGGGAGTTaGAAGGCAGAATTCCCTCCTTGGAGAGACGGCGGGAGCGACGTG | + |
Preference number: 5 (lower is better) Translates to: SRAPAQVGCQLHRGS*KAEFPPWRDGGSDV Trigger: CACGTCGCTCCCGCCGTCTCTCCAAGGAGGGAATTCTGCCTTCCAACTCCCTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCCCGCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | GAATCCCAGGGCTTCAGAATGGGGCTGCCCCAGGGTGCCTGGCGGTaGCTGCGGCAGAGACCAGTGGTGAAGGAACAGATTGCTCGCGGG | + |
Preference number: 5 (lower is better) Translates to: ESQGFRMGLPQGAWR*LRQRPVVKEQIARG Trigger: CCCGCGAGCAATCTGTTCCTTCACCACTGGTCTCTGCCGCAGCCACCGCCAGGCACCCTGGGGCAGCCCCATTCTGAAGCCCTGGGATTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 90 bp | CAGCATCTGTCCCGGGAACTCGGGTGGACCGCCTGCGGGTCACGATaGCTGACGGCTTGTGCTCGGTGGGGTACTGCTCAAGACCAGTCC | + |
Preference number: 5 (lower is better) Translates to: QHLSRELGWTACGSR*LTACARWGTAQDQS Trigger: GGACTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCGGTCCACCCGAGTTCCCGGGACAGATGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | CGCCTGCGGGTCACGATGACTGACGGCTTGTGCTCGGTGGGGTACTaGTCAAGACCAGTCCCATCCTCGTCAGCACCTCCGACTTGGGCC | + |
Preference number: 5 (lower is better) Translates to: RLRVTMTDGLCSVGY*SRPVPSSSAPPTWA Trigger: GGCCCAAGTCGGAGGTGCTGACGAGGATGGGACTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | AGCTCCACAGGCTGGGTGGTGGAGGCCACCCCTGTGGGACCTTCGTaGGCCCCGTACTGTTCCTCCTTAGCTCTGAGGGACTGTGGTGGA | + |
Preference number: 5 (lower is better) Translates to: SSTGWVVEATPVGPS*APYCSSLALRDCGG Trigger: TCCACCACAGTCCCTCAGAGCTAAGGAGGAACAGTACGGGGCCCACGAAGGTCCCACAGGGGTGGCCTCCACCACCCAGCCTGTGGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | GGGTGCCAGCTCCATCGAGGGAGTTGGAAGGCAGAATTCCCTCCTTaGAGAGACGGCGGGAGCGACGTGGGAAGGCCATCTGGGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: GCQLHRGSWKAEFPP*RDGGSDVGRPSGAE Trigger: CTCAGCCCCAGATGGCCTTCCCACGTCGCTCCCGCCGTCTCTCCAAGGAGGGAATTCTGCCTTCCAACTCCCTCGATGGAGCTGGCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGTGGGGGCTGGCCAGGTaGCTGCTGCCAGCCACTGTC | + |
Preference number: 5 (lower is better) Translates to: GTVSVMAFSECRWKLGDRWGLAR*LLPATV Trigger: GACAGTGGCTGGCAGCAGCAACCTGGCCAGCCCCCA...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTGCAGACCCCGGGGCGTaGGGCTCATGGCTCCGGAGA | + |
Preference number: 5 (lower is better) Translates to: RTAVRARDLRDGPEHRHGADPGA*GSWLRR Trigger: TCTCCGGAGCCATGAGCCCAACGCCCCGGGGTCTGC...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS TCA 90 bp | ATCTGTCCCGGGAACTCGGGTGGACCGCCTGCGGGTCACGATGACTaGCGGCTTGTGCTCGGTGGGGTACTGCTCAAGACCAGTCCCATC | + |
Preference number: 5 (lower is better) Translates to: ICPGNSGGPPAGHDD*RLVLGGVLLKTSPI Trigger: GATGGGACTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCGGTCCACCCGAGTTCCCGGGACAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | GGAACTCGGGTGGACCGCCTGCGGGTCACGATGACTGACGGCTTGTaGTCGGTGGGGTACTGCTCAAGACCAGTCCCATCCTCGTCAGCA | + |
Preference number: 5 (lower is better) Translates to: GTRVDRLRVTMTDGL*SVGYCSRPVPSSSA Trigger: TGCTGACGAGGATGGGACTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCGGTCCACCCGAGTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | ATCTGTGACTCCCTCAGTTCTAACGGGAATCCCAGGGCTTCAGAATaGGGCTGCCCCAGGGTGCCTGGCGGTGGCTGCGGCAGAGACCAG | + |
Preference number: 5 (lower is better) Translates to: ICDSLSSNGNPRASE*GCPRVPGGGCGRDQ Trigger: CTGGTCTCTGCCGCAGCCACCGCCAGGCACCCTGGGGCAGCCCCATTCTGAAGCCCTGGGATTCCCGTTAGAACTGAGGGAGTCACAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTTGGGGGCTGGCCAGGTaGCTGCTGCCAGCCACTGTC | + |
Preference number: 5 (lower is better) Translates to: RTAVRARDLRDGPEHRHGWGLAR*LLPATV Trigger: GACAGTGGCTGGCAGCAGCAACCTGGCCAGCCCCCA...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGCTCTAAGGGGGCTGCTGAAGGCTTGGAGGACAGCAGTGAGGGCAAGAGACCTGGGCTCCTGCCCAGGTaGGGTGCCAGCTCCATCGAG | + |
Preference number: 5 (lower is better) Translates to: SSKGAAEGLEDSSEGKRPGLLPR*GASSIE Trigger: CTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCCC...AGGTCTCTTGCCCTCACTGCTGTCCTCCAAGCCTTCAGCAGCCCCCTTAGAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTAGGGCCAGCTCCTGGTaGGTGCCGGCCCCAGGGAAA | + |
Preference number: 5 (lower is better) Translates to: RTAVRARDLRDGPEHRHGRASSW*VPAPGK Trigger: TTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCCT...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | TCCTCTGCGGAAGGAGGAACAATGCTGCCATGGGGCGAGCTTGTGCTTGGCTTGAGGGCCAGCTCCTGGTaGGTGCCGGCCCCAGGGAAA | + |
Preference number: 5 (lower is better) Translates to: SSAEGGTMLPWGELVLGLRASSW*VPAPGK Trigger: TTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCCT...CAAGCCAAGCACAAGCTCGCCCCATGGCAGCATTGTTCCTCCTTCCGCAGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS TCA 90 bp | CACTTCGTATCATCTGTCCACAGTCCCCGAGGCCCCCTGCTCTCATaGCCTCCTCATTACCCATGGCGGGAGGCTCCCGCTCCCGACCAT | + |
Preference number: 5 (lower is better) Translates to: HFVSSVHSPRGPLLS*PPHYPWREAPAPDH Trigger: ATGGTCGGGAGCGGGAGCCTCCCGCCATGGGTAATGAGGAGGTCATGAGAGCAGGGGGCCTCGGGGACTGTGGACAGATGATACGAAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | CATGCTGCGGTGAGCCAGGTGGGTCTGTCCCAGTGGCCCACCTGGTaGCAGGCCAAAGTCCTGGTGCTGTTGCGAAGGCAGTTGATGCAT | + |
Preference number: 5 (lower is better) Translates to: HAAVSQVGLSQWPTW*QAKVLVLLRRQLMH Trigger: ATGCATCAACTGCCTTCGCAACAGCACCAGGACTTTGGCCTGGCACCAGGTGGGCCACTGGGACAGACCCACCTGGCTCACCGCAGCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | TTCGTGGGCCCCGTACTGTTCCTCCTTAGCTCTGAGGGACTGTGGTaGACTCTGCAGTGGTGGTGGCTGTTCCTTGGCGGCTGGCTCCTG | + |
Preference number: 5 (lower is better) Translates to: FVGPVLFLLSSEGLW*TLQWWWLFLGGWLL Trigger: CAGGAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGTCCCTCAGAGCTAAGGAGGAACAGTACGGGGCCCACGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | ACCTTCGTGGGCCCCGTACTGTTCCTCCTTAGCTCTGAGGGACTGTaGTGGACTCTGCAGTGGTGGTGGCTGTTCCTTGGCGGCTGGCTC | + |
Preference number: 5 (lower is better) Translates to: TFVGPVLFLLSSEGL*WTLQWWWLFLGGWL Trigger: GAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGTCCCTCAGAGCTAAGGAGGAACAGTACGGGGCCCACGAAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGAGAGTTCAAGGGTGCTaGGGGCCTCCCCACCTCCAG | + |
Preference number: 5 (lower is better) Translates to: GTVSVMAFSECRWKLGDRRVQGC*GPPHLQ Trigger: CTGGAGGTGGGGAGGCCCCAAGCACCCTTGAACTCT...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | GGCACGGTCAGTGTCATGGCCTTCTCTGAATGCAGGTGGAAGCTGGGGGACAGGCTTGGGCCACCTCAGTaGGACCCACAGTCCTCACGG | + |
Preference number: 5 (lower is better) Translates to: GTVSVMAFSECRWKLGDRLGPPQ*DPQSSR Trigger: CCGTGAGGACTGTGGGTCCAACTGAGGTGGCCCAAG...CCTGTCCCCCAGCTTCCACCTGCATTCAGAGAAGGCCATGACACTGACCGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGCAGACCCCGGGGCGTaGGGCTCATGGCTCCGGAGA | + |
Preference number: 5 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLADPGA*GSWLRR Trigger: TCTCCGGAGCCATGAGCCCAACGCCCCGGGGTCTGC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS GCA 90 bp | CTGAGGGCCCTGCCGGAAGACCTGACGGTTCACCTGGTGGCCAAATaGCAGCTGGAAGGGTTGCAAGGGCAGTGTCTGGTTTGGGGGTTT | + |
Preference number: 5 (lower is better) Translates to: LRALPEDLTVHLVAK*QLEGLQGQCLVWGF Trigger: AAACCCCCAAACCAGACACTGCCCTTGCAACCCTTCCAGCTGGCATTTGGCCACCAGGTGAACCGTCAGGTCTTCCGGCAGGGCCCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | CGCCCTGGAGCCATCACAGAGCTGGGCCACTTTACCGAGCTTACTTaGGCCTGCTGGGACAACATGGCTGCCGTGGTCCTCTCAGATCCA | + |
Preference number: 5 (lower is better) Translates to: RPGAITELGHFTELT*ACWDNMAAVVLSDP Trigger: TGGATCTGAGAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGTGGCCCAGCTCTGTGATGGCTCCAGGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | AAAGTCCAAGTGACCCTCTCCTGGCCCCTTCTAGAGGTTCCAGGGACTGGGGTGGGCTGCCGGTTGCTGTaGCTGCTGCTGCTTCTGAGG | + |
Preference number: 5 (lower is better) Translates to: KVQVTLSWPLLEVPGTGVGCRLL*LLLLLR Trigger: CCTCAGAAGCAGCAGCAGCAACAGCAACCGGCAGCC...CACCCCAGTCCCTGGAACCTCTAGAAGGGGCCAGGAGAGGGTCACTTGGACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTGGCTGCCGGTTGCTGTaGCTGCTGCTGCTTCTGAGG | + |
Preference number: 5 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLGCRLL*LLLLLR Trigger: CCTCAGAAGCAGCAGCAGCAACAGCAACCGGCAGCC...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGGCCGCGGCCGCTGCTTaGGTTTCCGCATGGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: RPQRWPRTQARSVSWPSLAAAAA*VSAWKA Trigger: AGCCTTCCATGCGGAAACCAAAGCAGCGGCCGCGGC...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS TCA 90 bp | GCGGCCGCTGCTTTGGTTTCCGCATGGAAGGCTCCCCTTCCAACTTaGCGTTCAGGTCTTCAGCCTGAGCTGCAGCATCTGTCCCGGGAA | + |
Preference number: 5 (lower is better) Translates to: AAAALVSAWKAPLPT*RSGLQPELQHLSRE Trigger: TTCCCGGGACAGATGCTGCAGCTCAGGCTGAAGACCTGAACGTCAAGTTGGAAGGGGAGCCTTCCATGCGGAAACCAAAGCAGCGGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 90 bp | GTGCAGGGCCAGCTCCTGGTTGGTGCCGGCCCCAGGGAAAATGCTTaGACAGGCAGCTGTCAGCAGGTCATCCACTTGTCTCTGCTTCTC | + |
Preference number: 5 (lower is better) Translates to: VQGQLLVGAGPRENA*TGSCQQVIHLSLLL Trigger: GAGAAGCAGAGACAAGTGGATGACCTGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | AGTGGTGAAGGAACAGATTGCTCGCGGGCTCCTGCCCAGGTTGGGTaGCAGCTCCATCGAGGGAGTTGGAAGGCAGAATTCCCTCCTTGG | + |
Preference number: 5 (lower is better) Translates to: SGEGTDCSRAPAQVG*QLHRGSWKAEFPPW Trigger: CCAAGGAGGGAATTCTGCCTTCCAACTCCCTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCCCGCGAGCAATCTGTTCCTTCACCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | GGACTGTGGTGGACTCTGCAGTGGTGGTGGCTGTTCCTTGGCGGCTaGCTCCTGGTCCCCAAAAGGACAACGCTTGCGTTTACTCTGAGC | + |
Preference number: 5 (lower is better) Translates to: GLWWTLQWWWLFLGG*LLVPKRTTLAFTLS Trigger: GCTCAGAGTAAACGCAAGCGTTGTCCTTTTGGGGACCAGGAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | CTTCAGTGCCTCCGGGTGGTTATAGTAGGGAGGTACCCCCACACCTaGATGAGGGCTCCCTTTGGGTCCACCGTAGAGGGGCAGGTGATT | + |
Preference number: 5 (lower is better) Translates to: LQCLRVVIVGRYPHT*MRAPFGSTVEGQVI Trigger: AATCACCTGCCCCTCTACGGTGGACCCAAAGGGAGCCCTCATCCAGGTGTGGGGGTACCTCCCTACTATAACCACCCGGAGGCACTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | GCCAGCTCCACTGCCTTCTGGGCCAGGGTCAGCAAATTAGCCTCCTaGGACACCCTGCGTCTCCGTTTTGTGCTCTGGATCACCCCACTT | + |
Preference number: 5 (lower is better) Translates to: ASSTAFWARVSKLAS*DTLRLRFVLWITPL Trigger: AAGTGGGGTGATCCAGAGCACAAAACGGAGACGCAGGGTGTCCCAGGAGGCTAATTTGCTGACCCTGGCCCAGAAGGCAGTGGAGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | ACCAGTCCCATCCTCGTCAGCACCTCCGACTTGGGCCACCTCAGTTaGACCCACAGTCCTCACGGGAACAGACACAGGAATGATGAGGGG | + |
Preference number: 5 (lower is better) Translates to: TSPILVSTSDLGHLS*THSPHGNRHRNDEG Trigger: CCCCTCATCATTCCTGTGTCTGTTCCCGTGAGGACTGTGGGTCCAACTGAGGTGGCCCAAGTCGGAGGTGCTGACGAGGATGGGACTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | ACAGGCGGGGTGACTTCAGAGCTATTAGAGCGGAGCAGGGTTCGATaGGCACTCTTTGGCGTGATAGGAGGAGGGGCCGGGATGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: TGGVTSELLERSRVR*ALFGVIGGGAGMLL Trigger: CAGCAACATCCCGGCCCCTCCTCCTATCACGCCAAAGAGTGCCCATCGAACCCTGCTCCGCTCTAATAGCTCTGAAGTCACCCCGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 90 bp | GGCACTCTTTGGCGTGATAGGAGGAGGGGCCGGGATGTTGCTGGTTaGTATGATGGCATTGAAGTAGAGGCCAGAGCCTTCCCGGACGGG | + |
Preference number: 5 (lower is better) Translates to: GTLWRDRRRGRDVAG*YDGIEVEARAFPDG Trigger: CCCGTCCGGGAAGGCTCTGGCCTCTACTTCAATGCCATCATATCAACCAGCAACATCCCGGCCCCTCCTCCTATCACGCCAAAGAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | GGAGCCATCACAGAGCTGGGCCACTTTACCGAGCTTACTTGGGCCTaGTGGGACAACATGGCTGCCGTGGTCCTCTCAGATCCATACACC | + |
Preference number: 5 (lower is better) Translates to: GAITELGHFTELTWA*WDNMAAVVLSDPYT Trigger: GGTGTATGGATCTGAGAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGTGGCCCAGCTCTGTGATGGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | CTTCTCCTCAGAGCCATTGGCATCCTGCATAGAGGCCAGCTCCACTaGCTTCTGGGCCAGGGTCAGCAAATTAGCCTCCTGGGACACCCT | + |
Preference number: 5 (lower is better) Translates to: LLLRAIGILHRGQLH*LLGQGQQISLLGHP Trigger: AGGGTGTCCCAGGAGGCTAATTTGCTGACCCTGGCCCAGAAGGCAGTGGAGCTGGCCTCTATGCAGGATGCCAATGGCTCTGAGGAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | GATAGTGCAGGGCCAGCTCCTGGTTGGTGCCGGCCCCAGGGAAAATaGTTGAACAGGCAGCTGTCAGCAGGTCATCCACTTGTCTCTGCT | + |
Preference number: 5 (lower is better) Translates to: DSAGPAPGWCRPQGK*LNRQLSAGHPLVSA Trigger: AGCAGAGACAAGTGGATGACCTGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCCTGCACTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTGCTCCATCGAGGGAGTaGGAAGGCAGAATTCCCTCC | + |
Preference number: 5 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLAPSRE*EGRIPS Trigger: GGAGGGAATTCTGCCTTCCAACTCCCTCGATGGAGC...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGCCCTGCGTCTCCGTTTaGTGCTCTGGATCACCCCAC | + |
Preference number: 5 (lower is better) Translates to: RPQRWPRTQARSVSWPSLPCVSV*CSGSPH Trigger: GTGGGGTGATCCAGAGCACAAAACGGAGACGCAGGG...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGCTTGGGCCACCTCAGTaGGACCCACAGTCCTCACGG | + |
Preference number: 5 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLLGPPQ*DPQSSR Trigger: CCGTGAGGACTGTGGGTCCAACTGAGGTGGCCCAAG...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGACGATGACTGACGGCTaGTGCTCGGTGGGGTACTGC | + |
Preference number: 5 (lower is better) Translates to: RPQRWPRTQARSVSWPSLTMTDG*CSVGYC Trigger: GCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTGGAGGGGCCGGGATGTaGCTGGTTGATATGATGGCA | + |
Preference number: 5 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLGGAGM*LVDMMA Trigger: TGCCATCATATCAACCAGCAACATCCCGGCCCCTCC...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTAAGGTGAGCGTCCCGTaGCGGCCGATTTTCACCTGT | + |
Preference number: 5 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLKVSVP*RPIFTC Trigger: ACAGGTGAAAATCGGCCGCAACGGGACGCTCACCTT...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS GCA 90 bp | GGGCCACTTTACCGAGCTTACTTGGGCCTGCTGGGACAACATGGCTaGCGTGGTCCTCTCAGATCCATACACCACACTGTTCAGGAGAGC | + |
Preference number: 5 (lower is better) Translates to: GPLYRAYLGLLGQHG*RGPLRSIHHTVQES Trigger: GCTCTCCTGAACAGTGTGGTGTATGGATCTGAGAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | GTGCCAGGCCAAAGTCCTGGTGCTGTTGCGAAGGCAGTTGATGCATaGGGTAGTAGTTCTCAAATAGCTGCATCTGGGGCAGGGCTGCCG | + |
Preference number: 5 (lower is better) Translates to: VPGQSPGAVAKAVDA*GSSSQIAASGAGLP Trigger: CGGCAGCCCTGCCCCAGATGCAGCTATTTGAGAACTACTACCCCATGCATCAACTGCCTTCGCAACAGCACCAGGACTTTGGCCTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | CGGCTAAGGCAGGCTCGGAAAACTCCACGCCACACCTGGAAGTTGTaGCCAACACGCTTTTCCGCTTCTCCTCAGAGCCATTGGCATCCT | + |
Preference number: 5 (lower is better) Translates to: RLRQARKTPRHTWKL*PTRFSASPQSHWHP Trigger: AGGATGCCAATGGCTCTGAGGAGAAGCGGAAAAGCGTGTTGGCCACAACTTCCAGGTGTGGCGTGGAGTTTTCCGAGCCTGCCTTAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | CTCTCTTGGCGGCTAAGGCAGGCTCGGAAAACTCCACGCCACACCTaGAAGTTGTGGCCAACACGCTTTTCCGCTTCTCCTCAGAGCCAT | + |
Preference number: 5 (lower is better) Translates to: LSWRLRQARKTPRHT*KLWPTRFSASPQSH Trigger: ATGGCTCTGAGGAGAAGCGGAAAAGCGTGTTGGCCACAACTTCCAGGTGTGGCGTGGAGTTTTCCGAGCCTGCCTTAGCCGCCAAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | TCAAAAGCTGCCAGCGCTCGGTCTCTCATCATGGGGATTTCTGCCTaGAACCGGGTCCCGACGTTGATTCGTGGTTCGATGCTCACAGGG | + |
Preference number: 5 (lower is better) Translates to: SKAASARSLIMGISA*NRVPTLIRGSMLTG Trigger: CCCTGTGAGCATCGAACCACGAATCAACGTCGGGACCCGGTTCCAGGCAGAAATCCCCATGATGAGAGACCGAGCGCTGGCAGCTTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTTTCAGGAGAGCCAGGTaGTTAGGAGGAGACAGCTCC | + |
Preference number: 5 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLFRRAR*LGGDSS Trigger: GGAGCTGTCTCCTCCTAACAACCTGGCTCTCCTGAA...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAGCTGGCACCAAAGAGCAGGCCAGGCCTCTCTAGGACCTGCTTGAGGCTCCTTTGGGAGGAGGCACCCTaGGGAACTTCTGAGAAGTCT | + |
Preference number: 5 (lower is better) Translates to: KLAPKSRPGLSRTCLRLLWEEAP*GTSEKS Trigger: AGACTTCTCAGAAGTTCCCAAGGGTGCCTCCTCCCA...AAGGAGCCTCAAGCAGGTCCTAGAGAGGCCTGGCCTGCTCTTTGGTGCCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS TCA 90 bp | CCTCTTGGCCTGACTTCTCGTCACCGATATCCAGGTCGCCGAAGGTaGGCGTCCCGTTGCGGCCGATTTTCACCTGTTTCTTGTAGGTGT | + |
Preference number: 5 (lower is better) Translates to: PLGLTSRHRYPGRRR*ASRCGRFSPVSCRC Trigger: ACACCTACAAGAAACAGGTGAAAATCGGCCGCAACGGGACGCTCACCTTCGGCGACCTGGATATCGGTGACGAGAAGTCAGGCCAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | AGCTGGGCCACTTTACCGAGCTTACTTGGGCCTGCTGGGACAACATaGCTGCCGTGGTCCTCTCAGATCCATACACCACACTGTTCAGGA | + |
Preference number: 5 (lower is better) Translates to: SWATLPSLLGPAGTT*LPWSSQIHTPHCSG Trigger: TCCTGAACAGTGTGGTGTATGGATCTGAGAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGTGGCCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | GTGGCCAAATGCCAGCTGGAAGGGTTGCAAGGGCAGTGTCTGGTTTaGGGGTTTCTTGGCTGCATGGAAAGAGTTCAAGGGTGCTTGGGG | + |
Preference number: 5 (lower is better) Translates to: VAKCQLEGLQGQCLV*GFLGCMERVQGCLG Trigger: CCCCAAGCACCCTTGAACTCTTTCCATGCAGCCAAGAAACCCCCAAACCAGACACTGCCCTTGCAACCCTTCCAGCTGGCATTTGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGAGGGCAGTGTCTGGTTaGGGGGTTTCTTGGCTGCAT | + |
Preference number: 5 (lower is better) Translates to: RPQRWPRTQARSVSWPSLRAVSG*GVSWLH Trigger: ATGCAGCCAAGAAACCCCCAAACCAGACACTGCCCT...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTCCTGCAGGAGAGCCTaGCGCAGTTCTGGGTTCATA | + |
Preference number: 5 (lower is better) Translates to: RPQRWPRTQARSVSWPSLSCRRA*RSSGFI Trigger: TATGAACCCAGAACTGCGCAAGGCTCTCCTGCAGGA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGGCTCCATCGAGGGAGTaGGAAGGCAGAATTCCCTCC | + |
Preference number: 5 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLAPSRE*EGRIPS Trigger: GGAGGGAATTCTGCCTTCCAACTCCCTCGATGGAGC...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTTCTCCTCAGAGCCATaGGCATCCTGCATAGAGGCC | + |
Preference number: 5 (lower is better) Translates to: RPQRWPRTQARSVSWPSLFSSEP*ASCIEA Trigger: GGCCTCTATGCAGGATGCCAATGGCTCTGAGGAGAA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGCCCCAGGGAAAATGCTaGAACAGGCAGCTGTCAGCA | + |
Preference number: 5 (lower is better) Translates to: RPQRWPRTQARSVSWPSLPQGKC*NRQLSA Trigger: TGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGGG...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGGACAGCAGTGAGGGCAAGAGACCTCAGAGATGGCCCAGAACACAGGCACGGTATGGCAATGCCCTTGTaGAACAGCTTCCTCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: RTAVRARDLRDGPEHRHGMAMPL*NSFLSA Trigger: GGCTGAGAGGAAGCTGTTCAACAAGGGCATTGCCAT...ACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCTCTTGCCCTCACTGCTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGCACTGGGCCACAGTCTaGGTCTGGATCAGCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLHWATV*VWISFC Trigger: GCAGAAGCTGATCCAGACCAAGACTGTGGCCCAGTG...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACCTCAGAGATGGCCCAGAACACAGGCACGGTCAGTGTCATGGCCTTCTCTGTGGGAGGAGGCACCCTaGGGAACTTCTGAGAAGTCT | + |
Preference number: 5 (lower is better) Translates to: RPQRWPRTQARSVSWPSLWEEAP*GTSEKS Trigger: AGACTTCTCAGAAGTTCCCAAGGGTGCCTCCTCCCA...CAGAGAAGGCCATGACACTGACCGTGCCTGTGTTCTGGGCCATCTCTGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS CCA 90 bp | ACTTTACCGAGCTTACTTGGGCCTGCTGGGACAACATGGCTGCCGTaGTCCTCTCAGATCCATACACCACACTGTTCAGGAGAGCCAGGT | + |
Preference number: 5 (lower is better) Translates to: TLPSLLGPAGTTWLP*SSQIHTPHCSGEPG Trigger: ACCTGGCTCTCCTGAACAGTGTGGTGTATGGATCTGAGAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | AAAAGGCAGGACAGAGACCTGCCTTTGACCTCACCCACATCTGCTGGCTTCCTGAGGGCAGTGTCTGGTTaGGGGGTTTCTTGGCTGCAT | + |
Preference number: 5 (lower is better) Translates to: KRQDRDLPLTSPTSAGFLRAVSG*GVSWLH Trigger: ATGCAGCCAAGAAACCCCCAAACCAGACACTGCCCT...CAGGAAGCCAGCAGATGTGGGTGAGGTCAAAGGCAGGTCTCTGTCCTGCCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS TCA 90 bp | TCACTTGGGGACTCTCTTCTGGGAGGAGGCACCCTTGGGAACTTCTaGGAAGTCTTAACGTCCACCTCAACCTCCTCTTGGCCTGACTTC | + |
Preference number: 5 (lower is better) Translates to: SLGDSLLGGGTLGNF*EVLTSTSTSSWPDF Trigger: GAAGTCAGGCCAAGAGGAGGTTGAGGTGGACGTTAAGACTTCTCAGAAGTTCCCAAGGGTGCCTCCTCCCAGAAGAGAGTCCCCAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 90 bp | AGGCAGCTGTCAGCAGGTCATCCACTTGTCTCTGCTTCTCCCAGCTaGTCTCAAGATGTTCCCATGGCTGCCACACCAAGTCAGCCTTAT | + |
Preference number: 5 (lower is better) Translates to: RQLSAGHPLVSASPS*SQDVPMAATPSQPY Trigger: ATAAGGCTGACTTGGTGTGGCAGCCATGGGAACATCTTGAGAGCAGCTGGGAGAAGCAGAGACAAGTGGATGACCTGCTGACAGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 90 bp | CAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAGGAGGCACCCTTaGGAACTTCTGAGAAGTCTTAACGTCCACCTCAACCTCCTCTTG | + |
Preference number: 5 (lower is better) Translates to: QPLFTWGLSSGRRHP*ELLRSLNVHLNLLL Trigger: CAAGAGGAGGTTGAGGTGGACGTTAAGACTTCTCAGAAGTTCCCAAGGGTGCCTCCTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGGTGGTGGCTGTTCCTaGGCGGCTGGCTCCTGGTCC | + |
Preference number: 5 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRGGGCS*AAGSWS Trigger: GGACCAGGAGCCAGCCGCCAAGGAACAGCCACCACC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAAGAGTTCAAGGGTGCTaGGGGCCTCCCCACCTCCAG | + |
Preference number: 5 (lower is better) Translates to: NPISISNSQRAVGYFRSLRVQGC*GPPHLQ Trigger: CTGGAGGTGGGGAGGCCCCAAGCACCCTTGAACTCT...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACATGGCAATGCCCTTGTaGAACAGCTTCCTCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHMAMPL*NSFLSA Trigger: GGCTGAGAGGAAGCTGTTCAACAAGGGCATTGCCAT...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AGACGGGATTGTTGGAGCAACTCCGGCCTGAGCATGACAGCACAAGGACAACACTGCGGCCTTCTTCTCTaGCTCTGCGTGACTCTTCAT | + |
Preference number: 5 (lower is better) Translates to: RRDCWSNSGLSMTAQGQHCGLLL*LCVTLH Trigger: ATGAAGAGTCACGCAGAGCAAGAGAAGAAGGCCGCA...GTGTTGTCCTTGTGCTGTCATGCTCAGGCCGGAGTTGCTCCAACAATCCCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAAGGGCTCCTGCCCAGGTaGGGTGCCAGCTCCATCGAG | + |
Preference number: 5 (lower is better) Translates to: KTRILASCQLPRAFESTEGLLPR*GASSIE Trigger: CTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCCC...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTAACGATGACTGACGGCTaGTGCTCGGTGGGGTACTGC | + |
Preference number: 5 (lower is better) Translates to: NPISISNSQRAVGYFRSLTMTDG*CSVGYC Trigger: GCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGT...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS GCA 90 bp | CTGCGGCCTTCTTCTCTTGCTCTGCGTGACTCTTCATGTGAGCACTaGGGCTCTTCACCTTGTAAAACACCCTGCCGCACTTTTTACAAG | + |
Preference number: 5 (lower is better) Translates to: LRPSSLALRDSSCEH*GSSPCKTPCRTFYK Trigger: CTTGTAAAAAGTGCGGCAGGGTGTTTTACAAGGTGAAGAGCCGCAGTGCTCACATGAAGAGTCACGCAGAGCAAGAGAAGAAGGCCGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGGGCAGAATTCCCTCCTaGGAGAGACGGCGGGAGCGA | + |
Preference number: 5 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRGRIPS*ERRRER Trigger: TCGCTCCCGCCGTCTCTCCAAGGAGGGAATTCTGCC...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTGGCAGAATTCCCTCCTaGGAGAGACGGCGGGAGCGA | + |
Preference number: 5 (lower is better) Translates to: VKQGALNRKNNKSQAQCVGRIPS*ERRRER Trigger: TCGCTCCCGCCGTCTCTCCAAGGAGGGAATTCTGCC...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTATCCTGCAGGAGAGCCTaGCGCAGTTCTGGGTTCATA | + |
Preference number: 5 (lower is better) Translates to: NPISISNSQRAVGYFRSLSCRRA*RSSGFI Trigger: TATGAACCCAGAACTGCGCAAGGCTCTCCTGCAGGA...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTCCCTGCGTCTCCGTTTaGTGCTCTGGATCACCCCAC | + |
Preference number: 5 (lower is better) Translates to: VKQGALNRKNNKSQAQCVPCVSV*CSGSPH Trigger: GTGGGGTGATCCAGAGCACAAAACGGAGACGCAGGG...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AACCCCATCTCTATTTCCAATTCCCAACGGGCTGTAGGCTATTTCCGCTCCTTACCCCAGGGAAAATGCTaGAACAGGCAGCTGTCAGCA | + |
Preference number: 5 (lower is better) Translates to: NPISISNSQRAVGYFRSLPQGKC*NRQLSA Trigger: TGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGGG...TAAGGAGCGGAAATAGCCTACAGCCCGTTGGGAATTGGAAATAGAGATGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTCACTGGGCCACAGTCTaGGTCTGGATCAGCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: VKQGALNRKNNKSQAQCVHWATV*VWISFC Trigger: GCAGAAGCTGATCCAGACCAAGACTGTGGCCCAGTG...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS TCA 90 bp | TCTGCACCAGGAAGAAATCTTTCTTATAGATGGCAATGCCCTTGTTaGACAGCTTCCTCTCAGCCGTCTTCCACTGGTCAGAGCCTGTGT | + |
Preference number: 5 (lower is better) Translates to: SAPGRNLSYRWQCPC*TASSQPSSTGQSLC Trigger: ACACAGGCTCTGACCAGTGGAAGACGGCTGAGAGGAAGCTGTTCAACAAGGGCATTGCCATCTATAAGAAAGATTTCTTCCTGGTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS-3UTR CAA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTTTCAGGAGAGCCAGGTaGTTAGGAGGAGACAGCTCC | + |
Preference number: 5 (lower is better) Translates to: VKQGALNRKNNKSQAQCVFRRAR*LGGDSS Trigger: GGAGCTGTCTCCTCCTAACAACCTGGCTCTCCTGAA...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGCAGCAGGTCATCCACTaGTCTCTGCTTCTCCCAGCT | + |
Preference number: 5 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRQQVIH*SLLLPA Trigger: AGCTGGGAGAAGCAGAGACAAGTGGATGACCTGCTG...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | GTCAAACAGGGAGCTCTGAATAGAAAGAACAACAAAAGCCAAGCCCAGTGTGTTCAGCAGGTCATCCACTaGTCTCTGCTTCTCCCAGCT | + |
Preference number: 5 (lower is better) Translates to: VKQGALNRKNNKSQAQCVQQVIH*SLLLPA Trigger: AGCTGGGAGAAGCAGAGACAAGTGGATGACCTGCTG...AACACACTGGGCTTGGCTTTTGTTGTTCTTTCTATTCAGAGCTCCCTGTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAAAAGGTGAGCGTCCCGTaGCGGCCGATTTTCACCTGT | + |
Preference number: 5 (lower is better) Translates to: KTRILASCQLPRAFESTEKVSVP*RPIFTC Trigger: ACAGGTGAAAATCGGCCGCAACGGGACGCTCACCTT...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | AAAACTAGAATTCTGGCCTCTTGCCAACTCCCTCGAGCATTTGAAAGTACAGAATTCTCCTCAGAGCCATaGGCATCCTGCATAGAGGCC | + |
Preference number: 5 (lower is better) Translates to: KTRILASCQLPRAFESTEFSSEP*ASCIEA Trigger: GGCCTCTATGCAGGATGCCAATGGCTCTGAGGAGAA...TTCTGTACTTTCAAATGCTCGAGGGAGTTGGCAAGAGGCCAGAATTCTAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS-3UTR CAA 90 bp | CTATTGCACTCTTCCTCCTCTGTCTTTAACATCTGGCACATGAGAAGAAAGAGGTGCGGCCTTCTTCTCTaGCTCTGCGTGACTCTTCAT | + |
Preference number: 5 (lower is better) Translates to: LLHSSSSVFNIWHMRRKRCGLLL*LCVTLH Trigger: ATGAAGAGTCACGCAGAGCAAGAGAAGAAGGCCGCA...CCTCTTTCTTCTCATGTGCCAGATGTTAAAGACAGAGGAGGAAGAGTGCAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS CCA 72 bp | GGCCATGCTGCGGTGAGCCAGGTGGGTCTGTCCCAGTaGCCCACCTGGTGCCAGGCCAAAGTCCTGGTGCTG | + |
Preference number: 6 (lower is better) Translates to: GHAAVSQVGLSQ*PTWCQAKVLVL Trigger: CAGCACCAGGACTTTGGCCTGGCACCAGGTGGGCCACTGGGACAGACCCACCTGGCTCACCGCAGCATGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | AGGGTGCCTGGCGGTGGCTGCGGCAGAGACCAGTGGTaGAGGAACAGATTGCTCGCGGGCTCCTGCCCAGGT | + |
Preference number: 6 (lower is better) Translates to: RVPGGGCGRDQW*RNRLLAGSCPG Trigger: ACCTGGGCAGGAGCCCGCGAGCAATCTGTTCCTTCACCACTGGTCTCTGCCGCAGCCACCGCCAGGCACCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GGCTGGGTGGTGGAGGCCACCCCTGTGGGACCTTCGTaGGCCCCGTACTGTTCCTCCTTAGCTCTGAGGGAC | + |
Preference number: 6 (lower is better) Translates to: GWVVEATPVGPS*APYCSSLALRD Trigger: GTCCCTCAGAGCTAAGGAGGAACAGTACGGGGCCCACGAAGGTCCCACAGGGGTGGCCTCCACCACCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | TCCCAGGGCTTCAGAATGGGGCTGCCCCAGGGTGCCTaGCGGTGGCTGCGGCAGAGACCAGTGGTGAAGGAA | + |
Preference number: 6 (lower is better) Translates to: SQGFRMGLPQGA*RWLRQRPVVKE Trigger: TTCCTTCACCACTGGTCTCTGCCGCAGCCACCGCCAGGCACCCTGGGGCAGCCCCATTCTGAAGCCCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | TCCCTCAGTTCTAACGGGAATCCCAGGGCTTCAGAATaGGGCTGCCCCAGGGTGCCTGGCGGTGGCTGCGGC | + |
Preference number: 6 (lower is better) Translates to: SLSSNGNPRASE*GCPRVPGGGCG Trigger: GCCGCAGCCACCGCCAGGCACCCTGGGGCAGCCCCATTCTGAAGCCCTGGGATTCCCGTTAGAACTGAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | GGGAACTCGGGTGGACCGCCTGCGGGTCACGATGACTaGCGGCTTGTGCTCGGTGGGGTACTGCTCAAGACC | + |
Preference number: 6 (lower is better) Translates to: GNSGGPPAGHDD*RLVLGGVLLKT Trigger: GGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCGGTCCACCCGAGTTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | TCCCGGGAACTCGGGTGGACCGCCTGCGGGTCACGATaGCTGACGGCTTGTGCTCGGTGGGGTACTGCTCAA | + |
Preference number: 6 (lower is better) Translates to: SRELGWTACGSR*LTACARWGTAQ Trigger: TTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCGGTCCACCCGAGTTCCCGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | TTCTCCCCTTCGCCGCTCTCTTCTCTCAGCGCCTGCTaGTGTGCGGCGGCCGCTGCAGCCTCCTTCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: FSPSPLSSLSAC*CAAAAAASFSF Trigger: GAAGGAGAAGGAGGCTGCAGCGGCCGCCGCACATCAGCAGGCGCTGAGAGAAGAGAGCGGCGAAGGGGAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 |
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CDS GCA 72 bp | GTGAGCCAGGTGGGTCTGTCCCAGTGGCCCACCTGGTaGCAGGCCAAAGTCCTGGTGCTGTTGCGAAGGCAG | + |
Preference number: 6 (lower is better) Translates to: VSQVGLSQWPTW*QAKVLVLLRRQ Trigger: CTGCCTTCGCAACAGCACCAGGACTTTGGCCTGGCACCAGGTGGGCCACTGGGACAGACCCACCTGGCTCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | GTGGCTGCGGCAGAGACCAGTGGTGAAGGAACAGATTaGTCGCGGGCTCCTGCCCAGGTTGGGTGCCAGCTC | + |
Preference number: 6 (lower is better) Translates to: VAAAETSGEGTD*SRAPAQVGCQL Trigger: GAGCTGGCACCCAACCTGGGCAGGAGCCCGCGAGCAATCTGTTCCTTCACCACTGGTCTCTGCCGCAGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | CGGGTGGACCGCCTGCGGGTCACGATGACTGACGGCTaGTGCTCGGTGGGGTACTGCTCAAGACCAGTCCCA | + |
Preference number: 6 (lower is better) Translates to: RVDRLRVTMTDG*CSVGYCSRPVP Trigger: TGGGACTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCGGTCCACCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 90 bp | CCGGGAACTCGGGTGGACCGCCTGCGGGTCACGATGACTGACGGCTaGTGCTCGGTGGGGTACTGCTCAAGACCAGTCCCATCCTCGTCA | + |
Preference number: 6 (lower is better) Translates to: PGTRVDRLRVTMTDG*CSVGYCSRPVPSSS Trigger: TGACGAGGATGGGACTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCGGTCCACCCGAGTTCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | TCATCTGTCCACAGTCCCCGAGGCCCCCTGCTCTCATaGCCTCCTCATTACCCATGGCGGGAGGCTCCCGCT | + |
Preference number: 6 (lower is better) Translates to: SSVHSPRGPLLS*PPHYPWREAPA Trigger: AGCGGGAGCCTCCCGCCATGGGTAATGAGGAGGTCATGAGAGCAGGGGGCCTCGGGGACTGTGGACAGATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | GTGGACCGCCTGCGGGTCACGATGACTGACGGCTTGTaGTCGGTGGGGTACTGCTCAAGACCAGTCCCATCC | + |
Preference number: 6 (lower is better) Translates to: VDRLRVTMTDGL*SVGYCSRPVPS Trigger: GGATGGGACTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGACCCGCAGGCGGTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CTTAGCTCTGAGGGACTGTGGTGGACTCTGCAGTGGTaGTGGCTGTTCCTTGGCGGCTGGCTCCTGGTCCCC | + |
Preference number: 6 (lower is better) Translates to: LSSEGLWWTLQW*WLFLGGWLLVP Trigger: GGGGACCAGGAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGTCCCTCAGAGCTAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CCTGCCCAGGTTGGGTGCCAGCTCCATCGAGGGAGTTaGAAGGCAGAATTCCCTCCTTGGAGAGACGGCGGG | + |
Preference number: 6 (lower is better) Translates to: PAQVGCQLHRGS*KAEFPPWRDGG Trigger: CCCGCCGTCTCTCCAAGGAGGGAATTCTGCCTTCCAACTCCCTCGATGGAGCTGGCACCCAACCTGGGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GGCTTCAGAATGGGGCTGCCCCAGGGTGCCTGGCGGTaGCTGCGGCAGAGACCAGTGGTGAAGGAACAGATT | + |
Preference number: 6 (lower is better) Translates to: GFRMGLPQGAWR*LRQRPVVKEQI Trigger: AATCTGTTCCTTCACCACTGGTCTCTGCCGCAGCCACCGCCAGGCACCCTGGGGCAGCCCCATTCTGAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 90 bp | CCGCCCTGGAGCCATCACAGAGCTGGGCCACTTTACCGAGCTTACTaGGGCCTGCTGGGACAACATGGCTGCCGTGGTCCTCTCAGATCC | + |
Preference number: 6 (lower is better) Translates to: PPWSHHRAGPLYRAY*GLLGQHGCRGPLRS Trigger: GGATCTGAGAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGTGGCCCAGCTCTGTGATGGCTCCAGGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 90 bp | TCCCTCGGCTTCTCTGAGGTCTGGATACCTGCAGACCCCGGGGCGTaGGGCTCATGGCTCCGGAGAATGAGAACGTCATTGGCCGCCTCA | + |
Preference number: 6 (lower is better) Translates to: SLGFSEVWIPADPGA*GSWLRRMRTSLAAS Trigger: TGAGGCGGCCAATGACGTTCTCATTCTCCGGAGCCATGAGCCCAACGCCCCGGGGTCTGCAGGTATCCAGACCTCAGAGAAGCCGAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | CAGACCCCGGGGCGTTGGGCTCATGGCTCCGGAGAATaGGAACGTCATTGGCCGCCTCATTGGCCTGTAGTG | + |
Preference number: 6 (lower is better) Translates to: QTPGRWAHGSGE*ERHWPPHWPVV Trigger: CACTACAGGCCAATGAGGCGGCCAATGACGTTCTCATTCTCCGGAGCCATGAGCCCAACGCCCCGGGGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CTCCTTAGCTCTGAGGGACTGTGGTGGACTCTGCAGTaGTGGTGGCTGTTCCTTGGCGGCTGGCTCCTGGTC | + |
Preference number: 6 (lower is better) Translates to: LLSSEGLWWTLQ*WWLFLGGWLLV Trigger: GACCAGGAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGTCCCTCAGAGCTAAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CTCCGGGTGGTTATAGTAGGGAGGTACCCCCACACCTaGATGAGGGCTCCCTTTGGGTCCACCGTAGAGGGG | + |
Preference number: 6 (lower is better) Translates to: LRVVIVGRYPHT*MRAPFGSTVEG Trigger: CCCCTCTACGGTGGACCCAAAGGGAGCCCTCATCCAGGTGTGGGGGTACCTCCCTACTATAACCACCCGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GCCTCCCCACCTCCAGCTGCACCTTCTGTGGCACCATaGGCTGCACTGCGTTTCCATAGTGATCCAGCTGGG | + |
Preference number: 6 (lower is better) Translates to: ASPPPAAPSVAP*AALRFHSDPAG Trigger: CCCAGCTGGATCACTATGGAAACGCAGTGCAGCCCATGGTGCCACAGAAGGTGCAGCTGGAGGTGGGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | GACTGTGGTGGACTCTGCAGTGGTGGTGGCTGTTCCTaGGCGGCTGGCTCCTGGTCCCCAAAAGGACAACGC | + |
Preference number: 6 (lower is better) Translates to: DCGGLCSGGGCS*AAGSWSPKGQR Trigger: GCGTTGTCCTTTTGGGGACCAGGAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | GCTCCATCGAGGGAGTTGGAAGGCAGAATTCCCTCCTaGGAGAGACGGCGGGAGCGACGTGGGAAGGCCATC | + |
Preference number: 6 (lower is better) Translates to: APSRELEGRIPS*ERRRERRGKAI Trigger: GATGGCCTTCCCACGTCGCTCCCGCCGTCTCTCCAAGGAGGGAATTCTGCCTTCCAACTCCCTCGATGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | GTGAAGGAACAGATTGCTCGCGGGCTCCTGCCCAGGTaGGGTGCCAGCTCCATCGAGGGAGTTGGAAGGCAG | + |
Preference number: 6 (lower is better) Translates to: VKEQIARGLLPR*GASSIEGVGRQ Trigger: CTGCCTTCCAACTCCCTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCCCGCGAGCAATCTGTTCCTTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | TGGCGGCTGGCTCCTGGTCCCCAAAAGGACAACGCTTaGGTTTACTCTGAGCCTTGGACTGGGCCTGGAGGT | + |
Preference number: 6 (lower is better) Translates to: WRLAPGPQKDNA*VYSEPWTGPGG Trigger: ACCTCCAGGCCCAGTCCAAGGCTCAGAGTAAACGCAAGCGTTGTCCTTTTGGGGACCAGGAGCCAGCCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | CTCCAGCTGCACCTTCTGTGGCACCATGGGCTGCACTaGGTTTCCATAGTGATCCAGCTGGGGACCTCCAGG | + |
Preference number: 6 (lower is better) Translates to: LQLHLLWHHGLH*VSIVIQLGTSR Trigger: CCTGGAGGTCCCCAGCTGGATCACTATGGAAACGCAGTGCAGCCCATGGTGCCACAGAAGGTGCAGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | GGAACAGATTGCTCGCGGGCTCCTGCCCAGGTTGGGTaGCAGCTCCATCGAGGGAGTTGGAAGGCAGAATTC | + |
Preference number: 6 (lower is better) Translates to: GTDCSRAPAQVG*QLHRGSWKAEF Trigger: GAATTCTGCCTTCCAACTCCCTCGATGGAGCTGGCACCCAACCTGGGCAGGAGCCCGCGAGCAATCTGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | GTCACGATGACTGACGGCTTGTGCTCGGTGGGGTACTaGTCAAGACCAGTCCCATCCTCGTCAGCACCTCCG | + |
Preference number: 6 (lower is better) Translates to: VTMTDGLCSVGY*SRPVPSSSAPP Trigger: CGGAGGTGCTGACGAGGATGGGACTGGTCTTGAGCAGTACCCCACCGAGCACAAGCCGTCAGTCATCGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | ACTGTGGTGGACTCTGCAGTGGTGGTGGCTGTTCCTTaGCGGCTGGCTCCTGGTCCCCAAAAGGACAACGCT | + |
Preference number: 6 (lower is better) Translates to: TVVDSAVVVAVP*RLAPGPQKDNA Trigger: AGCGTTGTCCTTTTGGGGACCAGGAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CCCGTACTGTTCCTCCTTAGCTCTGAGGGACTGTGGTaGACTCTGCAGTGGTGGTGGCTGTTCCTTGGCGGC | + |
Preference number: 6 (lower is better) Translates to: PVLFLLSSEGLW*TLQWWWLFLGG Trigger: GCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGTCCCTCAGAGCTAAGGAGGAACAGTACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GCCATCACAGAGCTGGGCCACTTTACCGAGCTTACTTaGGCCTGCTGGGACAACATGGCTGCCGTGGTCCTC | + |
Preference number: 6 (lower is better) Translates to: AITELGHFTELT*ACWDNMAAVVL Trigger: GAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGTGGCCCAGCTCTGTGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CTCCATCGAGGGAGTTGGAAGGCAGAATTCCCTCCTTaGAGAGACGGCGGGAGCGACGTGGGAAGGCCATCT | + |
Preference number: 6 (lower is better) Translates to: LHRGSWKAEFPP*RDGGSDVGRPS Trigger: AGATGGCCTTCCCACGTCGCTCCCGCCGTCTCTCCAAGGAGGGAATTCTGCCTTCCAACTCCCTCGATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GGGACTCATGCAGATAGTGCAGGGCCAGCTCCTGGTTaGTGCCGGCCCCAGGGAAAATGCTTGAACAGGCAG | + |
Preference number: 6 (lower is better) Translates to: GTHADSAGPAPG*CRPQGKCLNRQ Trigger: CTGCCTGTTCAAGCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCCTGCACTATCTGCATGAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | ATGAGGGGTACCATCCCACTCTCCTCCCGAGCTCTCTaGGCGGCTAAGGCAGGCTCGGAAAACTCCACGCCA | + |
Preference number: 6 (lower is better) Translates to: MRGTIPLSSRAL*AAKAGSENSTP Trigger: TGGCGTGGAGTTTTCCGAGCCTGCCTTAGCCGCCAAGAGAGCTCGGGAGGAGAGTGGGATGGTACCCCTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 90 bp | GCTCTGAGGGACTGTGGTGGACTCTGCAGTGGTGGTGGCTGTTCCTaGGCGGCTGGCTCCTGGTCCCCAAAAGGACAACGCTTGCGTTTA | + |
Preference number: 6 (lower is better) Translates to: ALRDCGGLCSGGGCS*AAGSWSPKGQRLRL Trigger: TAAACGCAAGCGTTGTCCTTTTGGGGACCAGGAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCACCACAGTCCCTCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | CTGCCGGAAGACCTGACGGTTCACCTGGTGGCCAAATaGCAGCTGGAAGGGTTGCAAGGGCAGTGTCTGGTT | + |
Preference number: 6 (lower is better) Translates to: LPEDLTVHLVAK*QLEGLQGQCLV Trigger: AACCAGACACTGCCCTTGCAACCCTTCCAGCTGGCATTTGGCCACCAGGTGAACCGTCAGGTCTTCCGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | ACTTCGTATCATCTGTCCACAGTCCCCGAGGCCCCCTaGTCTCATGACCTCCTCATTACCCATGGCGGGAGG | + |
Preference number: 6 (lower is better) Translates to: TSYHLSTVPEAP*SHDLLITHGGR Trigger: CCTCCCGCCATGGGTAATGAGGAGGTCATGAGAGCAGGGGGCCTCGGGGACTGTGGACAGATGATACGAAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | AGCTGCCAGCGCTCGGTCTCTCATCATGGGGATTTCTaGCTGGAACCGGGTCCCGACGTTGATTCGTGGTTC | + |
Preference number: 6 (lower is better) Translates to: SCQRSVSHHGDF*LEPGPDVDSWF Trigger: GAACCACGAATCAACGTCGGGACCCGGTTCCAGGCAGAAATCCCCATGATGAGAGACCGAGCGCTGGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | ACTCATGCAGATAGTGCAGGGCCAGCTCCTGGTTGGTaGCGGCCCCAGGGAAAATGCTTGAACAGGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: THADSAGPAPGW*RPQGKCLNRQL Trigger: CAGCTGCCTGTTCAAGCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCCTGCACTATCTGCATGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | TGGACTCTGCAGTGGTGGTGGCTGTTCCTTGGCGGCTaGCTCCTGGTCCCCAAAAGGACAACGCTTGCGTTT | + |
Preference number: 6 (lower is better) Translates to: WTLQWWWLFLGG*LLVPKRTTLAF Trigger: AAACGCAAGCGTTGTCCTTTTGGGGACCAGGAGCCAGCCGCCAAGGAACAGCCACCACCACTGCAGAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GCTATTAGAGCGGAGCAGGGTTCGATGGGCACTCTTTaGCGTGATAGGAGGAGGGGCCGGGATGTTGCTGGT | + |
Preference number: 6 (lower is better) Translates to: AIRAEQGSMGTL*RDRRRGRDVAG Trigger: ACCAGCAACATCCCGGCCCCTCCTCCTATCACGCCAAAGAGTGCCCATCGAACCCTGCTCCGCTCTAATAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GTGACTTCAGAGCTATTAGAGCGGAGCAGGGTTCGATaGGCACTCTTTGGCGTGATAGGAGGAGGGGCCGGG | + |
Preference number: 6 (lower is better) Translates to: VTSELLERSRVR*ALFGVIGGGAG Trigger: CCCGGCCCCTCCTCCTATCACGCCAAAGAGTGCCCATCGAACCCTGCTCCGCTCTAATAGCTCTGAAGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GCCAGCGCTCGGTCTCTCATCATGGGGATTTCTGCCTaGAACCGGGTCCCGACGTTGATTCGTGGTTCGATG | + |
Preference number: 6 (lower is better) Translates to: ASARSLIMGISA*NRVPTLIRGSM Trigger: CATCGAACCACGAATCAACGTCGGGACCCGGTTCCAGGCAGAAATCCCCATGATGAGAGACCGAGCGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | AGCCATCACAGAGCTGGGCCACTTTACCGAGCTTACTaGGGCCTGCTGGGACAACATGGCTGCCGTGGTCCT | + |
Preference number: 6 (lower is better) Translates to: SHHRAGPLYRAY*GLLGQHGCRGP Trigger: AGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGTGGCCCAGCTCTGTGATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | CATCCTCGTCAGCACCTCCGACTTGGGCCACCTCAGTaGGACCCACAGTCCTCACGGGAACAGACACAGGAA | + |
Preference number: 6 (lower is better) Translates to: HPRQHLRLGPPQ*DPQSSREQTQE Trigger: TTCCTGTGTCTGTTCCCGTGAGGACTGTGGGTCCAACTGAGGTGGCCCAAGTCGGAGGTGCTGACGAGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | CCAGCTCCTGGTTGGTGCCGGCCCCAGGGAAAATGCTaGAACAGGCAGCTGTCAGCAGGTCATCCACTTGTC | + |
Preference number: 6 (lower is better) Translates to: PAPGWCRPQGKC*NRQLSAGHPLV Trigger: GACAAGTGGATGACCTGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 90 bp | ACAGGAATGATGAGGGGTACCATCCCACTCTCCTCCCGAGCTCTCTaGGCGGCTAAGGCAGGCTCGGAAAACTCCACGCCACACCTGGAA | + |
Preference number: 6 (lower is better) Translates to: TGMMRGTIPLSSRAL*AAKAGSENSTPHLE Trigger: TTCCAGGTGTGGCGTGGAGTTTTCCGAGCCTGCCTTAGCCGCCAAGAGAGCTCGGGAGGAGAGTGGGATGGTACCCCTCATCATTCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 90 bp | AGTGCAGGGCCAGCTCCTGGTTGGTGCCGGCCCCAGGGAAAATGCTaGAACAGGCAGCTGTCAGCAGGTCATCCACTTGTCTCTGCTTCT | + |
Preference number: 6 (lower is better) Translates to: SAGPAPGWCRPQGKC*NRQLSAGHPLVSAS Trigger: AGAAGCAGAGACAAGTGGATGACCTGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTGGCCCTGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 90 bp | TGGCGGCTAAGGCAGGCTCGGAAAACTCCACGCCACACCTGGAAGTaGTGGCCAACACGCTTTTCCGCTTCTCCTCAGAGCCATTGGCAT | + |
Preference number: 6 (lower is better) Translates to: WRLRQARKTPRHTWK*WPTRFSASPQSHWH Trigger: ATGCCAATGGCTCTGAGGAGAAGCGGAAAAGCGTGTTGGCCACAACTTCCAGGTGTGGCGTGGAGTTTTCCGAGCCTGCCTTAGCCGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | CAGCTCCTGGTTGGTGCCGGCCCCAGGGAAAATGCTTaGACAGGCAGCTGTCAGCAGGTCATCCACTTGTCT | + |
Preference number: 6 (lower is better) Translates to: QLLVGAGPRENA*TGSCQQVIHLS Trigger: AGACAAGTGGATGACCTGCTGACAGCTGCCTGTTCAAGCATTTTCCCTGGGGCCGGCACCAACCAGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | GCCTCCTGGGACACCCTGCGTCTCCGTTTTGTGCTCTaGATCACCCCACTTCGTATCATCTGTCCACAGTCC | + |
Preference number: 6 (lower is better) Translates to: ASWDTLRLRFVL*ITPLRIICPQS Trigger: GGACTGTGGACAGATGATACGAAGTGGGGTGATCCAGAGCACAAAACGGAGACGCAGGGTGTCCCAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | ACTGCCTTCTGGGCCAGGGTCAGCAAATTAGCCTCCTaGGACACCCTGCGTCTCCGTTTTGTGCTCTGGATC | + |
Preference number: 6 (lower is better) Translates to: TAFWARVSKLAS*DTLRLRFVLWI Trigger: GATCCAGAGCACAAAACGGAGACGCAGGGTGTCCCAGGAGGCTAATTTGCTGACCCTGGCCCAGAAGGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CGGCTAAGGCAGGCTCGGAAAACTCCACGCCACACCTaGAAGTTGTGGCCAACACGCTTTTCCGCTTCTCCT | + |
Preference number: 6 (lower is better) Translates to: RLRQARKTPRHT*KLWPTRFSASP Trigger: AGGAGAAGCGGAAAAGCGTGTTGGCCACAACTTCCAGGTGTGGCGTGGAGTTTTCCGAGCCTGCCTTAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | TGGCCCACCTGGTGCCAGGCCAAAGTCCTGGTGCTGTaGCGAAGGCAGTTGATGCATGGGGTAGTAGTTCTC | + |
Preference number: 6 (lower is better) Translates to: WPTWCQAKVLVL*RRQLMHGVVVL Trigger: GAGAACTACTACCCCATGCATCAACTGCCTTCGCAACAGCACCAGGACTTTGGCCTGGCACCAGGTGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | AGCACGGGCTGTGAAGCAGGGTCCTGCAGGAGAGCCTaGCGCAGTTCTGGGTTCATATCTGGGTTGTGGGAA | + |
Preference number: 6 (lower is better) Translates to: STGCEAGSCRRA*RSSGFISGLWE Trigger: TTCCCACAACCCAGATATGAACCCAGAACTGCGCAAGGCTCTCCTGCAGGACCCTGCTTCACAGCCCGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | AGGCAGGCTCGGAAAACTCCACGCCACACCTGGAAGTaGTGGCCAACACGCTTTTCCGCTTCTCCTCAGAGC | + |
Preference number: 6 (lower is better) Translates to: RQARKTPRHTWK*WPTRFSASPQS Trigger: GCTCTGAGGAGAAGCGGAAAAGCGTGTTGGCCACAACTTCCAGGTGTGGCGTGGAGTTTTCCGAGCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | TTCTCTGAGGTCTGGATACCTGCAGACCCCGGGGCGTaGGGCTCATGGCTCCGGAGAATGAGAACGTCATTG | + |
Preference number: 6 (lower is better) Translates to: FSEVWIPADPGA*GSWLRRMRTSL Trigger: CAATGACGTTCTCATTCTCCGGAGCCATGAGCCCAACGCCCCGGGGTCTGCAGGTATCCAGACCTCAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 90 bp | GGTGGCCAAATGCCAGCTGGAAGGGTTGCAAGGGCAGTGTCTGGTTaGGGGGTTTCTTGGCTGCATGGAAAGAGTTCAAGGGTGCTTGGG | + |
Preference number: 6 (lower is better) Translates to: GGQMPAGRVARAVSG*GVSWLHGKSSRVLG Trigger: CCCAAGCACCCTTGAACTCTTTCCATGCAGCCAAGAAACCCCCAAACCAGACACTGCCCTTGCAACCCTTCCAGCTGGCATTTGGCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | CTGACTTCTCGTCACCGATATCCAGGTCGCCGAAGGTaGGCGTCCCGTTGCGGCCGATTTTCACCTGTTTCT | + |
Preference number: 6 (lower is better) Translates to: LTSRHRYPGRRR*ASRCGRFSPVS Trigger: AGAAACAGGTGAAAATCGGCCGCAACGGGACGCTCACCTTCGGCGACCTGGATATCGGTGACGAGAAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | AGGGTTGCAAGGGCAGTGTCTGGTTTGGGGGTTTCTTaGCTGCATGGAAAGAGTTCAAGGGTGCTTGGGGCC | + |
Preference number: 6 (lower is better) Translates to: RVARAVSGLGVS*LHGKSSRVLGA Trigger: GGCCCCAAGCACCCTTGAACTCTTTCCATGCAGCCAAGAAACCCCCAAACCAGACACTGCCCTTGCAACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CAGGCTCGGAAAACTCCACGCCACACCTGGAAGTTGTaGCCAACACGCTTTTCCGCTTCTCCTCAGAGCCAT | + |
Preference number: 6 (lower is better) Translates to: QARKTPRHTWKL*PTRFSASPQSH Trigger: ATGGCTCTGAGGAGAAGCGGAAAAGCGTGTTGGCCACAACTTCCAGGTGTGGCGTGGAGTTTTCCGAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | AGATGTTCCCATGGCTGCCACACCAAGTCAGCCTTATaGGGGTCAAAAGCTGCCAGCGCTCGGTCTCTCATC | + |
Preference number: 6 (lower is better) Translates to: RCSHGCHTKSAL*GSKAASARSLI Trigger: GATGAGAGACCGAGCGCTGGCAGCTTTTGACCCCCATAAGGCTGACTTGGTGTGGCAGCCATGGGAACATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS TCA 72 bp | TGGCGTGATAGGAGGAGGGGCCGGGATGTTGCTGGTTaGTATGATGGCATTGAAGTAGAGGCCAGAGCCTTC | + |
Preference number: 6 (lower is better) Translates to: WRDRRRGRDVAG*YDGIEVEARAF Trigger: GAAGGCTCTGGCCTCTACTTCAATGCCATCATATCAACCAGCAACATCCCGGCCCCTCCTCCTATCACGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | TACCGAGCTTACTTGGGCCTGCTGGGACAACATGGCTaGCGTGGTCCTCTCAGATCCATACACCACACTGTT | + |
Preference number: 6 (lower is better) Translates to: YRAYLGLLGQHG*RGPLRSIHHTV Trigger: AACAGTGTGGTGTATGGATCTGAGAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | GAACAGGCAGCTGTCAGCAGGTCATCCACTTGTCTCTaGTTCTCCCAGCTGCTCTCAAGATGTTCCCATGGC | + |
Preference number: 6 (lower is better) Translates to: EQAAVSRSSTCL*FSQLLSRCSHG Trigger: GCCATGGGAACATCTTGAGAGCAGCTGGGAGAAGCAGAGACAAGTGGATGACCTGCTGACAGCTGCCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | ACTTTACCGAGCTTACTTGGGCCTGCTGGGACAACATaGCTGCCGTGGTCCTCTCAGATCCATACACCACAC | + |
Preference number: 6 (lower is better) Translates to: TLPSLLGPAGTT*LPWSSQIHTPH Trigger: GTGTGGTGTATGGATCTGAGAGGACCACGGCAGCCATGTTGTCCCAGCAGGCCCAAGTAAGCTCGGTAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | TGCTTCTCCCAGCTGCTCTCAAGATGTTCCCATGGCTaGCACACCAAGTCAGCCTTATGGGGGTCAAAAGCT | + |
Preference number: 6 (lower is better) Translates to: CFSQLLSRCSHG*HTKSALWGSKA Trigger: AGCTTTTGACCCCCATAAGGCTGACTTGGTGTGGCAGCCATGGGAACATCTTGAGAGCAGCTGGGAGAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | TCAGCAGGTCATCCACTTGTCTCTGCTTCTCCCAGCTaGTCTCAAGATGTTCCCATGGCTGCCACACCAAGT | + |
Preference number: 6 (lower is better) Translates to: SAGHPLVSASPS*SQDVPMAATPS Trigger: ACTTGGTGTGGCAGCCATGGGAACATCTTGAGAGCAGCTGGGAGAAGCAGAGACAAGTGGATGACCTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CAA 72 bp | ATGCCAGCTGGAAGGGTTGCAAGGGCAGTGTCTGGTTaGGGGGTTTCTTGGCTGCATGGAAAGAGTTCAAGG | + |
Preference number: 6 (lower is better) Translates to: MPAGRVARAVSG*GVSWLHGKSSR Trigger: CCTTGAACTCTTTCCATGCAGCCAAGAAACCCCCAAACCAGACACTGCCCTTGCAACCCTTCCAGCTGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS GCA 72 bp | TCTTCTCTTGCTCTGCGTGACTCTTCATGTGAGCACTaGGGCTCTTCACCTTGTAAAACACCCTGCCGCACT | + |
Preference number: 6 (lower is better) Translates to: SSLALRDSSCEH*GSSPCKTPCRT Trigger: AGTGCGGCAGGGTGTTTTACAAGGTGAAGAGCCGCAGTGCTCACATGAAGAGTCACGCAGAGCAAGAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |
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CDS CCA 72 bp | CAAAGTCCTGGTGCTGTTGCGAAGGCAGTTGATGCATaGGGTAGTAGTTCTCAAATAGCTGCATCTGGGGCA | + |
Preference number: 6 (lower is better) Translates to: QSPGAVAKAVDA*GSSSQIAASGA Trigger: TGCCCCAGATGCAGCTATTTGAGAACTACTACCCCATGCATCAACTGCCTTCGCAACAGCACCAGGACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046266.13 ENSMUST00000110294.2 ENSMUST00000220974.2 |