RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MICU2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021973

Ensembl transcript IDs: ENSMUST00000022543.10

Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGAGAGAACCAGCTCCTACAGGCTGGCCTCTGACTTCCCACTGTaGCACACACTTATTCACCTCCCGTCATCCCTCCCAAATCCCCCA +
Preference number: 1 (lower is better)
Translates to: TERTSSYRLASDFPL*HTLIHLPSSLPNPP
Trigger: TGGGGGATTTGGGAGGGATGACGGGAGGTGAATAAGTGTGTGCCACAGTGGGAAGTCAGAGGCCAGCCTGTAGGAGCTGGTTCTCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR CCA 90 bp GGAAAGCATGGTACACAGCTGTGTCCTTTGCTGGCTGAGCTCCCCTaGGAGTGTCTGGGAGAGGACACTCTATTTATATTTCAAAAGCAT +
Preference number: 1 (lower is better)
Translates to: GKHGTQLCPLLAELP*ECLGEDTLFIFQKH
Trigger: ATGCTTTTGAAATATAAATAGAGTGTCCTCTCCCAGACACTCCCAGGGGAGCTCAGCCAGCAAAGGACACAGCTGTGTACCATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR GCA 90 bp GTGATCTGTGTGTGTATGAGTGGTTTTAGATGGAACTCTGTGTGCTaGTTGTTAGGAAAGCATGGTACACAGCTGTGTCCTTTGCTGGCT +
Preference number: 1 (lower is better)
Translates to: VICVCMSGFRWNSVC*LLGKHGTQLCPLLA
Trigger: AGCCAGCAAAGGACACAGCTGTGTACCATGCTTTCCTAACAAGCAGCACACAGAGTTCCATCTAAAACCACTCATACACACACAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR CCA 90 bp GTGTGTGATCTGTGTGTGATCTGTGTGTGTATGAGTGGTTTTAGATaGAACTCTGTGTGCTGCTTGTTAGGAAAGCATGGTACACAGCTG +
Preference number: 1 (lower is better)
Translates to: VCDLCVICVCMSGFR*NSVCCLLGKHGTQL
Trigger: CAGCTGTGTACCATGCTTTCCTAACAAGCAGCACACAGAGTTCCATCTAAAACCACTCATACACACACAGATCACACACAGATCACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR-3UTR TCA 90 bp AGAAACATGGGGGTATTTACAGGAGCAGGGGCTTCCACACACACATGTATGTCCCTACAGGCTGGCCTCTaGCTTCCCACTGTGGCACAC +
Preference number: 2 (lower is better)
Translates to: RNMGVFTGAGASTHTCMSLQAGL*LPTVAH
Trigger: GTGTGCCACAGTGGGAAGTCAGAGGCCAGCCTGTAG...GGACATACATGTGTGTGTGGAAGCCCCTGCTCCTGTAAATACCCCCATGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR-3UTR GCA 90 bp AGAAACATGGGGGTATTTACAGGAGCAGGGGCTTCCACACACACATGTATGTCCCACAGCTGTGTCCTTTaGTGGCTGAGCTCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: RNMGVFTGAGASTHTCMSHSCVL*WLSSPG
Trigger: CCCAGGGGAGCTCAGCCAGCAAAGGACACAGCTGTG...GGACATACATGTGTGTGTGGAAGCCCCTGCTCCTGTAAATACCCCCATGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR-3UTR CCA 90 bp TGGAACTCTGTGTGCTGCTTGTTAGGAAAGCATGGTACACAGCTGTGTCCTTTGCCAGCTCCTACAGGCTaGCCTCTGACTTCCCACTGT +
Preference number: 2 (lower is better)
Translates to: WNSVCCLLGKHGTQLCPLPAPTG*PLTSHC
Trigger: ACAGTGGGAAGTCAGAGGCCAGCCTGTAGGAGCTGG...CAAAGGACACAGCTGTGTACCATGCTTTCCTAACAAGCAGCACACAGAGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR-3UTR CCA 90 bp CGGACACTGCCATTATGTGCTATTTCAAGGCAGGGAGCAAAGAACACTGGAGCAGGAAAAACCACTTTCTaGCTCCTGGAGCTCCATCAG +
Preference number: 2 (lower is better)
Translates to: RTLPLCAISRQGAKNTGAGKTTF*LLELHQ
Trigger: CTGATGGAGCTCCAGGAGCCAGAAAGTGGTTTTTCC...TGCTCCAGTGTTCTTTGCTCCCTGCCTTGAAATAGCACATAATGGCAGTGTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR-3UTR TCA 90 bp GCCAGACCGGACACTGCCATTATGTGCTATTTCAAGGCAGGGAGCAAAGAACACCCCCAAATCAGAAAGTaGGTCTTCACATCTTCACAC +
Preference number: 2 (lower is better)
Translates to: ARPDTAIMCYFKAGSKEHPQIRK*VFTSSH
Trigger: GTGTGAAGATGTGAAGACTCACTTTCTGATTTGGGG...GTGTTCTTTGCTCCCTGCCTTGAAATAGCACATAATGGCAGTGTCCGGTCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR CAA 90 bp ATCTGTGTGTGTATGAGTGGTTTTAGATGGAACTCTGTGTGCTGCTaGTTAGGAAAGCATGGTACACAGCTGTGTCCTTTGCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: ICVCMSGFRWNSVCC*LGKHGTQLCPLLAE
Trigger: CTCAGCCAGCAAAGGACACAGCTGTGTACCATGCTTTCCTAACAAGCAGCACACAGAGTTCCATCTAAAACCACTCATACACACACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR-3UTR CCA 90 bp GTAAATACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAAGAAACAGTCAGCTCTTaGAAAAACCACTTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: VNTSSCCQTGHCHYVLFQETVSS*KNHFLA
Trigger: AGCCAGAAAGTGGTTTTTCCAAGAGCTGACTGTTTC...TTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGTATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR TCA 72 bp GTAGACAGAGAGAACCAGCTCCTACAGGCTGGCCTCTaGCTTCCCACTGTGGCACACACTTATTCACCTCCC +
Preference number: 3 (lower is better)
Translates to: VDRENQLLQAGL*LPTVAHTYSPP
Trigger: GGGAGGTGAATAAGTGTGTGCCACAGTGGGAAGTCAGAGGCCAGCCTGTAGGAGCTGGTTCTCTCTGTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR CCA 72 bp TCCCATGGTAGACAGAGAGAACCAGCTCCTACAGGCTaGCCTCTGACTTCCCACTGTGGCACACACTTATTC +
Preference number: 3 (lower is better)
Translates to: SHGRQREPAPTG*PLTSHCGTHLF
Trigger: GAATAAGTGTGTGCCACAGTGGGAAGTCAGAGGCCAGCCTGTAGGAGCTGGTTCTCTCTGTCTACCATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR GCA 72 bp CTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTaGTATTTCAAGGCAGGGAGCAAAGAACACTGGAGC +
Preference number: 3 (lower is better)
Translates to: LHPAARPDTAIM*YFKAGSKEHWS
Trigger: GCTCCAGTGTTCTTTGCTCCCTGCCTTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR CCA 72 bp GGTACACAGCTGTGTCCTTTGCTGGCTGAGCTCCCCTaGGAGTGTCTGGGAGAGGACACTCTATTTATATTT +
Preference number: 3 (lower is better)
Translates to: GTQLCPLLAELP*ECLGEDTLFIF
Trigger: AAATATAAATAGAGTGTCCTCTCCCAGACACTCCCAGGGGAGCTCAGCCAGCAAAGGACACAGCTGTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR GCA 72 bp GGCAGGGAGCAAAGAACACTGGAGCAAGCCTTTAACTaGAAGTATTCCCTAAGCTATCACGGCTTCTGGGAT +
Preference number: 3 (lower is better)
Translates to: GREQRTLEQAFN*KYSLSYHGFWD
Trigger: ATCCCAGAAGCCGTGATAGCTTAGGGAATACTTGCAGTTAAAGGCTTGCTCCAGTGTTCTTTGCTCCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR TCA 72 bp TATCACGGCTTCTGGGATCAGTACCTGTCTTGGGAATaGAGTTCCTTCCCTGACTTGTTTAGCCCTCCAGAA +
Preference number: 3 (lower is better)
Translates to: YHGFWDQYLSWE*SSFPDLFSPPE
Trigger: TTCTGGAGGGCTAAACAAGTCAGGGAAGGAACTTCATTCCCAAGACAGGTACTGATCCCAGAAGCCGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR-3UTR CAA 90 bp GGGATCAGTACCTGTCTTGGGAATGAAGTTCCTTCCCTGACTTGTTTAGCCCTCAGAAACAGTCAGCTCTaGGAAAAACCACTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: GISTCLGNEVPSLTCLALRNSQL*EKPLSG
Trigger: GCCAGAAAGTGGTTTTTCCAAGAGCTGACTGTTTCT...GAGGGCTAAACAAGTCAGGGAAGGAACTTCATTCCCAAGACAGGTACTGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR GCA 72 bp GTGTGTATGAGTGGTTTTAGATGGAACTCTGTGTGCTaGTTGTTAGGAAAGCATGGTACACAGCTGTGTCCT +
Preference number: 3 (lower is better)
Translates to: VCMSGFRWNSVC*LLGKHGTQLCP
Trigger: AGGACACAGCTGTGTACCATGCTTTCCTAACAAGCAGCACACAGAGTTCCATCTAAAACCACTCATACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR CCA 72 bp CTGTGTGTGATCTGTGTGTGTATGAGTGGTTTTAGATaGAACTCTGTGTGCTGCTTGTTAGGAAAGCATGGT +
Preference number: 3 (lower is better)
Translates to: LCVICVCMSGFR*NSVCCLLGKHG
Trigger: ACCATGCTTTCCTAACAAGCAGCACACAGAGTTCCATCTAAAACCACTCATACACACACAGATCACACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR CCA 72 bp AAGAAACTCAATGAAGACATAGAAACAGTCAGCTCTTaGAAAAACCACTTTCTGGCTCCTGGAGCTCCATCA +
Preference number: 3 (lower is better)
Translates to: KKLNEDIETVSS*KNHFLAPGAPS
Trigger: TGATGGAGCTCCAGGAGCCAGAAAGTGGTTTTTCCAAGAGCTGACTGTTTCTATGTCTTCATTGAGTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR GCA 90 bp GCTCGAGACCTGAGTTCAATCTCTGGGACTCCCATGGTAGACAGAGAGAACCAGTGCCGCTCCTGCGCCTaGCAGGGCTACCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: ARDLSSISGTPMVDRENQCRSCA*QGYPGH
Trigger: GTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCA...CTGGTTCTCTCTGTCTACCATGGGAGTCCCAGAGATTGAACTCAGGTCTCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CCA 90 bp GCTCGAGACCTGAGTTCAATCTCTGGGACTCCCATGGTAGACAGAGAGAACCAGCCAAGGAACTCGCCGTaGCTGAGGCACTCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: ARDLSSISGTPMVDRENQPRNSP*LRHSSP
Trigger: CGGGGACGAGTGCCTCAGCCACGGCGAGTTCCTTGG...CTGGTTCTCTCTGTCTACCATGGGAGTCCCAGAGATTGAACTCAGGTCTCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR GCA 90 bp AAATACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAAGGATGCCATGCCGCTCCTaGGCCTGCCAGGGCTACCCC +
Preference number: 4 (lower is better)
Translates to: KYFILLPDRTLPLCAISRMPCRS*ACQGYP
Trigger: GGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGGCAT...CCTTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
3UTR CAA 72 bp TGCTTGTTAGGAAAGCATGGTACACAGCTGTGTCCTTaGCTGGCTGAGCTCCCCTGGGAGTGTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CLLGKHGTQLCP*LAELPWECLGE
Trigger: CTCTCCCAGACACTCCCAGGGGAGCTCAGCCAGCAAAGGACACAGCTGTGTACCATGCTTTCCTAACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp GTAAATACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAAGCTTTCACGCGGCCGTaGTGCCATGCCGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VNTSSCCQTGHCHYVLFQAFTRP*CHAAPA
Trigger: CGCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGC...TTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGTATTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CCA 90 bp AGGCTGGCCTCTGACTTCCCACTGTGGCACACACTTATTCACCTCCCGTCATCCAGGCTCTTTCACTGTTaGGTCCTGGTATTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RLASDFPLWHTLIHLPSSRLFHC*VLVFCL
Trigger: GAGACAGAATACCAGGACCCAACAGTGAAAGAGCCT...GGATGACGGGAGGTGAATAAGTGTGTGCCACAGTGGGAAGTCAGAGGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp AAATACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAAGGCCTTCACAGCTCTCTTaGACTCTGCCAGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: KYFILLPDRTLPLCAISRPSQLS*TLPAAQ
Trigger: CTGTGCGGCTGGCAGAGTTCAAGAGAGCTGTGAAGG...CCTTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp TGGCACACACTTATTCACCTCCCGTCATCCCTCCCAAATCCCCCAAATCAGAAATTGCTCAAACATGACTaGGAAGAGGAAGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: WHTLIHLPSSLPNPPNQKLLKHD*EEEVSG
Trigger: CCCCGAGACTTCCTCTTCTCAGTCATGTTTGAGCAA...TTTCTGATTTGGGGGATTTGGGAGGGATGACGGGAGGTGAATAAGTGTGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp GGCACACACTTATTCACCTCCCGTCATCCCTCCCAAATCCCCCAAATCAGAAAGCCAGGTCAAAGATCTTaGAGACGGTGTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GTHLFTSRHPSQIPQIRKPGQRS*RRCPED
Trigger: ATCTTCTGGACACCGTCTTCAAGATCTTTGACCTGG...CTTTCTGATTTGGGGGATTTGGGAGGGATGACGGGAGGTGAATAAGTGTGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp GGCACACACTTATTCACCTCCCGTCATCCCTCCCAAATCCCCCAAATCAGAAAGACATGGAACCCAGAGTaGGGTTTTGTGAGGATTGTA +
Preference number: 4 (lower is better)
Translates to: GTHLFTSRHPSQIPQIRKTWNPE*GFVRIV
Trigger: TACAATCCTCACAAAACCTCACTCTGGGTTCCATGT...CTTTCTGATTTGGGGGATTTGGGAGGGATGACGGGAGGTGAATAAGTGTGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp ACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAAGGCAGGCTTCCTTTACTCCCTTaGTGCTTTCCTTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: TSSCCQTGHCHYVLFQGRLPLLP*CFPSSH
Trigger: GTGTGAAGAAGGAAAGCATCAAGGGAGTAAAGGAAG...CCTGCCTTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR GCA 90 bp GCTCGAGACCTGAGTTCAATCTCTGGGACTCCCATGGTAGACAGAGAGAACCAGGTTTTACGCTCCACTTaGTCAAACATGACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ARDLSSISGTPMVDRENQVLRST*SNMTEK
Trigger: CTTCTCAGTCATGTTTGAGCAAGTGGAGCGTAAAAC...CTGGTTCTCTCTGTCTACCATGGGAGTCCCAGAGATTGAACTCAGGTCTCGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp CGGACACTGCCATTATGTGCTATTTCAAGGCAGGGAGCAAAGAACACTGGAGCATTTTTGCCAGCTTCTTaGCCAGTGTTTTACGCTCCA +
Preference number: 4 (lower is better)
Translates to: RTLPLCAISRQGAKNTGAFLPAS*PVFYAP
Trigger: TGGAGCGTAAAACACTGGTCAAGAAGCTGGCAAAAA...TGCTCCAGTGTTCTTTGCTCCCTGCCTTGAAATAGCACATAATGGCAGTGTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp TGGAACTCTGTGTGCTGCTTGTTAGGAAAGCATGGTACACAGCTGTGTCCTTTGTGCTGTTTGGATTCCTaGCAGTACATCCTCGATATC +
Preference number: 4 (lower is better)
Translates to: WNSVCCLLGKHGTQLCPLCCLDS*QYILDI
Trigger: GATATCGAGGATGTACTGTCAGGAATCCAAACAGCA...CAAAGGACACAGCTGTGTACCATGCTTTCCTAACAAGCAGCACACAGAGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp CGGACACTGCCATTATGTGCTATTTCAAGGCAGGGAGCAAAGAACACTGGAGCAAATGCTCTCTCCTACTaGCAACTTTTCTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: RTLPLCAISRQGAKNTGANALSY*QLFSHV
Trigger: AACGTGAGAGAAAAGTTGTCAGTAGGAGAGAGCATT...TGCTCCAGTGTTCTTTGCTCCCTGCCTTGAAATAGCACATAATGGCAGTGTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR GCA 90 bp GGCACACACTTATTCACCTCCCGTCATCCCTCCCAAATCCCCCAAATCAGAAAGTTACTTATGATCTTCTaGAGCTTAACAAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: GTHLFTSRHPSQIPQIRKLLMIF*SLTNSF
Trigger: GAAGGAGTTTGTTAAGCTGCAGAAGATCATAAGTAA...CTTTCTGATTTGGGGGATTTGGGAGGGATGACGGGAGGTGAATAAGTGTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR TCA 90 bp AGCTCCCCTGGGAGTGTCTGGGAGAGGACACTCTATTTATATTTCAAAAGCATGAAGATACTCGGTATATaGAATTACCCCTTTATCACC +
Preference number: 4 (lower is better)
Translates to: SSPGSVWERTLYLYFKSMKILGI*NYPFIT
Trigger: GGTGATAAAGGGGTAATTTCATATACCGAGTATCTT...CATGCTTTTGAAATATAAATAGAGTGTCCTCTCCCAGACACTCCCAGGGGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR GCA 90 bp AAATACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAAGGGCAAAGTCTTCCAAATaGGTTGTAAAATGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: KYFILLPDRTLPLCAISRAKSSK*VVKWQK
Trigger: CTTTTGCCATTTTACAACGCATTTGGAAGACTTTGC...CCTTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR GCA 90 bp CATTATGTGCTATTTCAAGGCAGGGAGCAAAGAACACTGGAGCAAGCCTTTAACGCTAAACTAAACATTTaGATGGCGATAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: HYVLFQGREQRTLEQAFNAKLNI*MAIAKS
Trigger: AGACTTTGCTATCGCCATGCAAATGTTTAGTTTAGC...GTTAAAGGCTTGCTCCAGTGTTCTTTGCTCCCTGCCTTGAAATAGCACATAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CCA 90 bp GTAAATACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAAAAATGCGTTGTAAAATaGCAAAAGGACTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: VNTSSCCQTGHCHYVLFQKCVVK*QKDLNS
Trigger: TGAGTTCAAGTCCTTTTGCCATTTTACAACGCATTT...TTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGTATTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 90 bp CCATGCCGCTCCTGCGCCTGCCAGGGCTACCCCGGCCACAGCCGCTaGGAGAGGGCCGCGAGTCGGCACAGCTCGTCGGCCGGCCGCGAG +
Preference number: 5 (lower is better)
Translates to: PCRSCACQGYPGHSR*ERAASRHSSSAGRE
Trigger: CTCGCGGCCGGCCGACGAGCTGTGCCGACTCGCGGCCCTCTCGCAGCGGCTGTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 90 bp CTCGCGCGCGGCTGCTTTCACGCGGCCGTGATGCCATGCCGCTCCTaGGCCTGCCAGGGCTACCCCGGCCACAGCCGCTGCGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LARGCFHAAVMPCRS*ACQGYPGHSRCERA
Trigger: GGCCCTCTCGCAGCGGCTGTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGCAGCCGCGCGCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 90 bp TCGGGAGCCCTCGCGCGCGGCTGCTTTCACGCGGCCGTGATGCCATaGCGCTCCTGCGCCTGCCAGGGCTACCCCGGCCACAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: SGALARGCFHAAVMP*RSCACQGYPGHSRC
Trigger: GCAGCGGCTGTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGCAGCCGCGCGCGAGGGCTCCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 90 bp CGCGGCTGCTTTCACGCGGCCGTGATGCCATGCCGCTCCTGCGCCTaGCAGGGCTACCCCGGCCACAGCCGCTGCGAGAGGGCCGCGAGT +
Preference number: 5 (lower is better)
Translates to: RGCFHAAVMPCRSCA*QGYPGHSRCERAAS
Trigger: ACTCGCGGCCCTCTCGCAGCGGCTGTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGCAGCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS TCA 90 bp GACACCGTTCGGGAGCCCTCGCGCGCGGCTGCTTTCACGCGGCCGTaGTGCCATGCCGCTCCTGCGCCTGCCAGGGCTACCCCGGCCACA +
Preference number: 5 (lower is better)
Translates to: DTVREPSRAAAFTRP*CHAAPAPARATPAT
Trigger: TGTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGCAGCCGCGCGCGAGGGCTCCCGAACGGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 90 bp ATAATTTTTCTGCGCCGACACCGTTCGGGAGCCCTCGCGCGCGGCTaGTTTCACGCGGCCGTGATGCCATGCCGCTCCTGCGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: IIFLRRHRSGALARG*FHAAVMPCRSCACQ
Trigger: CTGGCAGGCGCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGCAGCCGCGCGCGAGGGCTCCCGAACGGTGTCGGCGCAGAAAAATTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CAA 90 bp AGAAACATGGGGGTATTTACAGGAGCAGGGGCTTCCACACACACATGTATGTCCGGGGCCCTTGCCGGCTaGTTGTCTCCAGGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RNMGVFTGAGASTHTCMSGALAG*LSPGFL
Trigger: AAGGAAGCCTGGAGACAACAAGCCGGCAAGGGCCCC...GGACATACATGTGTGTGTGGAAGCCCCTGCTCCTGTAAATACCCCCATGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CAA 90 bp GCCATTATGTGCTATTTCAAGGCAGGGAGCAAAGAACACTGGAGCAAGCCTTTAACCTTCACAGCTCTCTaGAACTCTGCCAGCCGCACA +
Preference number: 5 (lower is better)
Translates to: AIMCYFKAGSKEHWSKPLTFTAL*NSASRT
Trigger: TGTGCGGCTGGCAGAGTTCAAGAGAGCTGTGAAGGT...TAAAGGCTTGCTCCAGTGTTCTTTGCTCCCTGCCTTGAAATAGCACATAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CAA 90 bp GCTCGAGACCTGAGTTCAATCTCTGGGACTCCCATGGTAGACAGAGAGAACCAGGCTTCCTTTACTCCCTaGATGCTTTCCTTCTTCACA +
Preference number: 5 (lower is better)
Translates to: ARDLSSISGTPMVDRENQASFTP*MLSFFT
Trigger: TGTGAAGAAGGAAAGCATCAAGGGAGTAAAGGAAGC...CTGGTTCTCTCTGTCTACCATGGGAGTCCCAGAGATTGAACTCAGGTCTCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS TCA 90 bp GAAGTCTCGGGGTGTCATGTAATACTCTCCGTCGTGCTCCAGGGATaGAAACTGCATGAACCGCTGTTTGCGGAGAGAAAGTTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: EVSGCHVILSVVLQG*KLHEPLFAERKFLY
Trigger: ATAGAGAAACTTTCTCTCCGCAAACAGCGGTTCATGCAGTTTTCATCCCTGGAGCACGACGGAGAGTATTACATGACACCCCGAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS TCA 90 bp CAGCTTCTTGACCAGTGTTTTACGCTCCACTTGCTCAAACATGACTaGGAAGAGGAAGTCTCGGGGTGTCATGTAATACTCTCCGTCGTG +
Preference number: 5 (lower is better)
Translates to: QLLDQCFTLHLLKHD*EEEVSGCHVILSVV
Trigger: CACGACGGAGAGTATTACATGACACCCCGAGACTTCCTCTTCTCAGTCATGTTTGAGCAAGTGGAGCGTAAAACACTGGTCAAGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CAA 90 bp CAAGGCAGGGAGCAAAGAACACTGGAGCAAGCCTTTAACTGCAAGTATTCCCTACCCAAAGAAACGCACTaGAAGGGTTGTGTTAACGCC +
Preference number: 5 (lower is better)
Translates to: QGREQRTLEQAFNCKYSLPKETH*KGCVNA
Trigger: GGCGTTAACACAACCCTTCAAGTGCGTTTCTTTGGG...TAGGGAATACTTGCAGTTAAAGGCTTGCTCCAGTGTTCTTTGCTCCCTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 90 bp ATGCTTTCCTTCTTCACACACTTCCAGTATTCTTGCACACTCTGCTaGTGTGACACCCATAAGCCTCGGTGCATCCTGTTTTTCAGTACC +
Preference number: 5 (lower is better)
Translates to: MLSFFTHFQYSCTLC*CDTHKPRCILFFST
Trigger: GGTACTGAAAAACAGGATGCACCGAGGCTTATGGGTGTCACAGCAGCAGAGTGTGCAAGAATACTGGAAGTGTGTGAAGAAGGAAAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS CCA 90 bp GAAACGCACTTGAAGGGTTGTGTTAACGCCAGGCTCTTTCACTGTTaGGTCCTGGTATTCTGTCTCATTAGTCTTCACTGTCTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: ETHLKGCVNARLFHC*VLVFCLISLHCLEA
Trigger: GGCTTCAAGACAGTGAAGACTAATGAGACAGAATACCAGGACCCAACAGTGAAAGAGCCTGGCGTTAACACAACCCTTCAAGTGCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS TCA 90 bp GTGTCATGTAATACTCTCCGTCGTGCTCCAGGGATGAAAACTGCATaGACCGCTGTTTGCGGAGAGAAAGTTTCTCTATTGGTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: VSCNTLRRAPGMKTA*TAVCGEKVSLLVPN
Trigger: ATTTGGGACCAATAGAGAAACTTTCTCTCCGCAAACAGCGGTTCATGCAGTTTTCATCCCTGGAGCACGACGGAGAGTATTACATGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 90 bp TTGATGCTTTCCTTCTTCACACACTTCCAGTATTCTTGCACACTCTaGTGCTGTGACACCCATAAGCCTCGGTGCATCCTGTTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: LMLSFFTHFQYSCTL*CCDTHKPRCILFFS
Trigger: ACTGAAAAACAGGATGCACCGAGGCTTATGGGTGTCACAGCAGCAGAGTGTGCAAGAATACTGGAAGTGTGTGAAGAAGGAAAGCATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CAA 90 bp CATTATGTGCTATTTCAAGGCAGGGAGCAAAGAACACTGGAGCAAGCCTTTAACCAGGCTCTTTCACTGTaGGGTCCTGGTATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: HYVLFQGREQRTLEQAFNQALSL*GPGILS
Trigger: AGACAGAATACCAGGACCCAACAGTGAAAGAGCCTG...GTTAAAGGCTTGCTCCAGTGTTCTTTGCTCCCTGCCTTGAAATAGCACATAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CAA 90 bp ACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAAGGCAGGTGTCTTGAAGCCATCTaGTTTACTTATGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: TSSCCQTGHCHYVLFQGRCLEAI*FTYDLL
Trigger: CAGAAGATCATAAGTAAACAAGATGGCTTCAAGACA...CCTGCCTTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS-3UTR CAA 90 bp GTAAATACTTCATCCTGCTGCCAGACCGGACACTGCCATTATGTGCTATTTCAATCCAGGTCAAAGATCTaGAAGACGGTGTCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: VNTSSCCQTGHCHYVLFQSRSKI*KTVSRR
Trigger: TCTTCTGGACACCGTCTTCAAGATCTTTGACCTGGA...TTGAAATAGCACATAATGGCAGTGTCCGGTCTGGCAGCAGGATGAAGTATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 72 bp TCCTGCGCCTGCCAGGGCTACCCCGGCCACAGCCGCTaGGAGAGGGCCGCGAGTCGGCACAGCTCGTCGGCC +
Preference number: 6 (lower is better)
Translates to: SCACQGYPGHSR*ERAASRHSSSA
Trigger: GGCCGACGAGCTGTGCCGACTCGCGGCCCTCTCGCAGCGGCTGTGGCCGGGGTAGCCCTGGCAGGCGCAGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 72 bp CTCGCGCGCGGCTGCTTTCACGCGGCCGTGATGCCATaGCGCTCCTGCGCCTGCCAGGGCTACCCCGGCCAC +
Preference number: 6 (lower is better)
Translates to: LARGCFHAAVMP*RSCACQGYPGH
Trigger: GTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGCAGCCGCGCGCGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 72 bp GGCTGCTTTCACGCGGCCGTGATGCCATGCCGCTCCTaGGCCTGCCAGGGCTACCCCGGCCACAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: GCFHAAVMPCRS*ACQGYPGHSRC
Trigger: GCAGCGGCTGTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 72 bp CTGCGCCGACACCGTTCGGGAGCCCTCGCGCGCGGCTaGTTTCACGCGGCCGTGATGCCATGCCGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LRRHRSGALARG*FHAAVMPCRSC
Trigger: GCAGGAGCGGCATGGCATCACGGCCGCGTGAAAGCAGCCGCGCGCGAGGGCTCCCGAACGGTGTCGGCGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 72 bp TTTCACGCGGCCGTGATGCCATGCCGCTCCTGCGCCTaGCAGGGCTACCCCGGCCACAGCCGCTGCGAGAGG +
Preference number: 6 (lower is better)
Translates to: FHAAVMPCRSCA*QGYPGHSRCER
Trigger: CCTCTCGCAGCGGCTGTGGCCGGGGTAGCCCTGGCAGGCGCAGGAGCGGCATGGCATCACGGCCGCGTGAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS CAA 72 bp TGGCTGAGGCACTCGTCCCCGTCCAGGTCAAAGATCTaGAAGACGGTGTCCAGAAGATTGTCCGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: WLRHSSPSRSKI*KTVSRRLSESS
Trigger: GGAGCTCTCGGACAATCTTCTGGACACCGTCTTCAAGATCTTTGACCTGGACGGGGACGAGTGCCTCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS CAA 90 bp TCGTCCCCGTCCAGGTCAAAGATCTTGAAGACGGTGTCCAGAAGATaGTCCGAGAGCTCCTGTCCAGTCGCTACCTTCACAGCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: SSPSRSKILKTVSRR*SESSCPVATFTALL
Trigger: CAAGAGAGCTGTGAAGGTAGCGACTGGACAGGAGCTCTCGGACAATCTTCTGGACACCGTCTTCAAGATCTTTGACCTGGACGGGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS CAA 90 bp AAGGGGCCCTTGCCGGCTTGTTGTCTCCAGGCTTCCTTTACTCCCTaGATGCTTTCCTTCTTCACACACTTCCAGTATTCTTGCACACTC +
Preference number: 6 (lower is better)
Translates to: KGPLPACCLQASFTP*MLSFFTHFQYSCTL
Trigger: GAGTGTGCAAGAATACTGGAAGTGTGTGAAGAAGGAAAGCATCAAGGGAGTAAAGGAAGCCTGGAGACAACAAGCCGGCAAGGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS TCA 72 bp GGGTGTCATGTAATACTCTCCGTCGTGCTCCAGGGATaGAAACTGCATGAACCGCTGTTTGCGGAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: GCHVILSVVLQG*KLHEPLFAERK
Trigger: CTTTCTCTCCGCAAACAGCGGTTCATGCAGTTTTCATCCCTGGAGCACGACGGAGAGTATTACATGACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 72 bp TCCTTCTTCACACACTTCCAGTATTCTTGCACACTCTaGTGCTGTGACACCCATAAGCCTCGGTGCATCCTG +
Preference number: 6 (lower is better)
Translates to: SFFTHFQYSCTL*CCDTHKPRCIL
Trigger: CAGGATGCACCGAGGCTTATGGGTGTCACAGCAGCAGAGTGTGCAAGAATACTGGAAGTGTGTGAAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS GCA 72 bp TTCTTCACACACTTCCAGTATTCTTGCACACTCTGCTaGTGTGACACCCATAAGCCTCGGTGCATCCTGTTT +
Preference number: 6 (lower is better)
Translates to: FFTHFQYSCTLC*CDTHKPRCILF
Trigger: AAACAGGATGCACCGAGGCTTATGGGTGTCACAGCAGCAGAGTGTGCAAGAATACTGGAAGTGTGTGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS TCA 72 bp AATACTCTCCGTCGTGCTCCAGGGATGAAAACTGCATaGACCGCTGTTTGCGGAGAGAAAGTTTCTCTATTG +
Preference number: 6 (lower is better)
Translates to: NTLRRAPGMKTA*TAVCGEKVSLL
Trigger: CAATAGAGAAACTTTCTCTCCGCAAACAGCGGTTCATGCAGTTTTCATCCCTGGAGCACGACGGAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS TCA 72 bp GACCAGTGTTTTACGCTCCACTTGCTCAAACATGACTaGGAAGAGGAAGTCTCGGGGTGTCATGTAATACTC +
Preference number: 6 (lower is better)
Translates to: DQCFTLHLLKHD*EEEVSGCHVIL
Trigger: GAGTATTACATGACACCCCGAGACTTCCTCTTCTCAGTCATGTTTGAGCAAGTGGAGCGTAAAACACTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10
CDS TCA 72 bp GGACTTGAACTCATCCAAACTAATGCTCTCTCCTACTaGCAACTTTTCTCTCACGTTTCTCCAGTAAATATC +
Preference number: 6 (lower is better)
Translates to: GLELIQTNALSY*QLFSHVSPVNI
Trigger: GATATTTACTGGAGAAACGTGAGAGAAAAGTTGTCAGTAGGAGAGAGCATTAGTTTGGATGAGTTCAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022543.10