Pregenerated sensors for MICU1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020111Ensembl transcript IDs: ENSMUST00000020311.13, ENSMUST00000092508.12, ENSMUST00000165563.8, ENSMUST00000167612.2, ENSMUST00000171409.8, ENSMUST00000179709.8
Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTATAAATCCACAGCGAGAGACAGATGTCAGAGCAGAGCAGAGCTaGCTCCCTCCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTG | + |
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Preference number: 1 (lower is better) Translates to: TINPQRETDVRAEQS*LPPGLAGVGRAPAL Trigger: CAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGGAGGGAGGCAGCTCTGCTCTGCTCTGACATCTGTCTCTCGCTGTGGATTTATAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR CCA 90 bp | GGAAGCCGGCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTaGGCACCACTCCCGATGCATCAGCAGCATGAAGGGCCACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GSRLSPEVTPRKMGR*APLPMHQQHEGPLQ Trigger: CTGGAGTGGCCCTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGCCGGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| 3UTR CCA 90 bp | TGGAATCTGGATTCTGCTGGGGGCACAGTGCCTTCCTGGAGCCCCTaGTGGCTAACACAGACCCTCCTCTGGCCAGGCTTCCTGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: WNLDSAGGTVPSWSP*WLTQTLLWPGFLPA Trigger: AGCTGGCAGGAAGCCTGGCCAGAGGAGGGTCTGTGTTAGCCACCAGGGGCTCCAGGAAGGCACTGTGCCCCCAGCAGAATCCAGATTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR CCA 90 bp | GCAGCCACTTGGAATCTGGATTCTGCTGGGGGCACAGTGCCTTCCTaGAGCCCCTGGTGGCTAACACAGACCCTCCTCTGGCCAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: AATWNLDSAGGTVPS*SPWWLTQTLLWPGF Trigger: GAAGCCTGGCCAGAGGAGGGTCTGTGTTAGCCACCAGGGGCTCCAGGAAGGCACTGTGCCCCCAGCAGAATCCAGATTCCAAGTGGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR CCA 90 bp | AGCTGGGAAGTTCTGGAGAGCTGCTTAAAGCAGCCACTTGGAATCTaGATTCTGCTGGGGGCACAGTGCCTTCCTGGAGCCCCTGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SWEVLESCLKQPLGI*ILLGAQCLPGAPGG Trigger: GCCACCAGGGGCTCCAGGAAGGCACTGTGCCCCCAGCAGAATCCAGATTCCAAGTGGCTGCTTTAAGCAGCTCTCCAGAACTTCCCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR GCA 90 bp | GCTAACACAGACCCTCCTCTGGCCAGGCTTCCTGCCAGCTCAGGGTaGCAGGGTCATCTGCATTATCATTCATCACACTTCCTTTCGCCT | + |
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Preference number: 1 (lower is better) Translates to: ANTDPPLARLPASSG*QGHLHYHSSHFLSP Trigger: AGGCGAAAGGAAGTGTGATGAATGATAATGCAGATGACCCTGGCACCCTGAGCTGGCAGGAAGCCTGGCCAGAGGAGGGTCTGTGTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR GCA 90 bp | ATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTaGAGCTTAAAAACAGCAGGAGGAAAATGGCAGGGAGTGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: IIHHTSFRLPAHFQT*SLKTAGGKWQGVFL Trigger: CAAGAACACTCCCTGCCATTTTCCTCCTGCTGTTTTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTGACCCACAGGGCACTTGCTGGCCACTCCAGGGCTTaGAGGGTGCTAAGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PGLAGVGRAPALTHRALAGHSRA*RVLRCR Trigger: CCTGCACCTTAGCACCCTGCAAGCCCTGGAGTGGCC...AGCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR TCA 90 bp | CCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTGACCCACAGGGCACTTGCTGATGCATCAGCAGCATaGAGGGCCACTCCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PGLAGVGRAPALTHRALADASAA*RATPGL Trigger: AAGCCCTGGAGTGGCCCTTCATGCTGCTGATGCATC...AGCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCGGCCACTCCAGGGCTTaGAGGGTGCTAAGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: WVWAPQVHREGMRHRDRGGHSRA*RVLRCR Trigger: CCTGCACCTTAGCACCCTGCAAGCCCTGGAGTGGCC...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCAGGCCACTCCAGGGCTTaGAGGGTGCTAAGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EPRGYSQKDGEVGTTPDAGHSRA*RVLRCR Trigger: CCTGCACCTTAGCACCCTGCAAGCCCTGGAGTGGCC...TGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCCCTTCCTGGAGCCCCTaGTGGCTAACACAGACCCTC | + |
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Preference number: 2 (lower is better) Translates to: WVWAPQVHREGMRHRDRGPSWSP*WLTQTL Trigger: GAGGGTCTGTGTTAGCCACCAGGGGCTCCAGGAAGG...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCAGGCCACTCCAGGGCTTaGAGGGTGCTAAGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GYSQKDGEVGTTPDASAAGHSRA*RVLRCR Trigger: CCTGCACCTTAGCACCCTGCAAGCCCTGGAGTGGCC...TGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCAGAAAGATGGGGAGGTaGGCACCACTCCCGATGCAT | + |
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Preference number: 2 (lower is better) Translates to: WVWAPQVHREGMRHRDRGRKMGR*APLPMH Trigger: ATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCT...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCCAGCCACTTGGAATCTaGATTCTGCTGGGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: WVWAPQVHREGMRHRDRGQPLGI*ILLGAQ Trigger: CTGTGCCCCCAGCAGAATCCAGATTCCAAGTGGCTG...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCGGCAGGGAGTGTTCTTaGTACTATAAATCCACAGCG | + |
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Preference number: 2 (lower is better) Translates to: WVWAPQVHREGMRHRDRGGRECS*YYKSTA Trigger: CGCTGTGGATTTATAGTAGCAAGAACACTCCCTGCC...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CCA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCAGAAAGATGGGGAGGTaGGCACCACTCCCGATGCAT | + |
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Preference number: 2 (lower is better) Translates to: FTSVLDRGQLGSELGLGSRKMGR*APLPMH Trigger: ATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCT...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCACAGCAGGAGGAAAATaGCAGGGAGTGTTCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: WVWAPQVHREGMRHRDRGTAGGK*QGVFLL Trigger: TAGCAAGAACACTCCCTGCCATTTTCCTCCTGCTGT...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CCA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCCAGCCACTTGGAATCTaGATTCTGCTGGGGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: FTSVLDRGQLGSELGLGSQPLGI*ILLGAQ Trigger: CTGTGCCCCCAGCAGAATCCAGATTCCAAGTGGCTG...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAGAGAGGGAAGCCGGCTaGGCCCAGAGGTTACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: IIHHTSFRLPAHFQTCSLEREAG*AQRLLP Trigger: TGGGAGTAACCTCTGGGCTCAGCCGGCTTCCCTCTC...TAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCGGTGCCAGGGTCATCTaGATTATCATTCATCACACT | + |
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Preference number: 2 (lower is better) Translates to: FTSVLDRGQLGSELGLGSGARVI*IIIHHT Trigger: AGTGTGATGAATGATAATGCAGATGACCCTGGCACC...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAAACAGCAGGAGGAAGAAAGATGGGGAGGTaGGCACCACTCCCGATGCAT | + |
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Preference number: 2 (lower is better) Translates to: SFRLPAHFQTCSLKTAGGRKMGR*APLPMH Trigger: ATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCT...TCCTCCTGCTGTTTTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAGATGCATCAGCAGCATaGAGGGCCACTCCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: IIHHTSFRLPAHFQTCSLDASAA*RATPGL Trigger: AAGCCCTGGAGTGGCCCTTCATGCTGCTGATGCATC...TAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAAAAACAGCAGGAGGAAAATGGCAGGGAGTGTTCTTGCTACTATAAATCCAGAGAGGGAAGCCGGCTaGGCCCAGAGGTTACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LKNSRRKMAGSVLATINPEREAG*AQRLLP Trigger: TGGGAGTAACCTCTGGGCTCAGCCGGCTTCCCTCTC...TGGATTTATAGTAGCAAGAACACTCCCTGCCATTTTCCTCCTGCTGTTTTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAATTACTCCCAGAAAGATaGGGAGGTGGGCACCACTCC | + |
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Preference number: 2 (lower is better) Translates to: HSSHFLSPASSFPNLQLKLLPER*GGGHHS Trigger: GGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATAATTAAAGTGATATTTTACGAGTGTCTTAGACAGAGGGCAGCTAGGGGATTACTCCCAGAAAGATaGGGAGGTGGGCACCACTCC | + |
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Preference number: 2 (lower is better) Translates to: AIIKVIFYECLRQRAARGLLPER*GGGHHS Trigger: GGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA...TCCCCTAGCTGCCCTCTGTCTAAGACACTCGTAAAATATCACTTTAATTATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
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| 3UTR CAA 90 bp | TATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTaGCAGCTTAAAAACAGCAGGAGGAAAATGGCAGGGAGTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: YHSSHFLSPASSFPN*QLKNSRRKMAGSVL Trigger: AAGAACACTCCCTGCCATTTTCCTCCTGCTGTTTTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR CCA 72 bp | AGAGCAGAGCTGCCTCCCTCCCGGGCTGGCCGGGGTTaGGAGGGCTCCTGCACTGACCCACAGGGCACTTGC | + |
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Preference number: 3 (lower is better) Translates to: RAELPPSRAGRG*EGSCTDPQGTC Trigger: GCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGGAGGGAGGCAGCTCTGCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR CCA 72 bp | TCTGCTGGGGGCACAGTGCCTTCCTGGAGCCCCTGGTaGCTAACACAGACCCTCCTCTGGCCAGGCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SAGGTVPSWSPW*LTQTLLWPGFL Trigger: CAGGAAGCCTGGCCAGAGGAGGGTCTGTGTTAGCCACCAGGGGCTCCAGGAAGGCACTGTGCCCCCAGCAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR CCA 72 bp | GATTCTGCTGGGGGCACAGTGCCTTCCTGGAGCCCCTaGTGGCTAACACAGACCCTCCTCTGGCCAGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: DSAGGTVPSWSP*WLTQTLLWPGF Trigger: GAAGCCTGGCCAGAGGAGGGTCTGTGTTAGCCACCAGGGGCTCCAGGAAGGCACTGTGCCCCCAGCAGAATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGGGCCACTCCAGGGCTaGCAGGGTGCTAAGGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: AEPRGYSQKDGEVGTTPDGPLQG*QGAKVQ Trigger: CTGCACCTTAGCACCCTGCAAGCCCTGGAGTGGCCC...ATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCGGGCCACTCCAGGGCTaGCAGGGTGCTAAGGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: RLLPERWGGGHHSRCISSGPLQG*QGAKVQ Trigger: CTGCACCTTAGCACCCTGCAAGCCCTGGAGTGGCCC...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| 3UTR CCA 72 bp | TGGAATCTGGATTCTGCTGGGGGCACAGTGCCTTCCTaGAGCCCCTGGTGGCTAACACAGACCCTCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: WNLDSAGGTVPS*SPWWLTQTLLW Trigger: CCAGAGGAGGGTCTGTGTTAGCCACCAGGGGCTCCAGGAAGGCACTGTGCCCCCAGCAGAATCCAGATTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CAA 90 bp | CCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTGACCCACAGGGCACTTGCTACTAAGGTCTCTACTTaGAAGCCTCAGTCCTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: PGLAGVGRAPALTHRALATKVST*KPQSCF Trigger: AAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGT...AGCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR GCA 72 bp | AGAGGGGATGAGACACAGGGACAGGGGCTCAGCCATTaGTCTAGTGAAGCAGAGTCCCAGAGGAGGCATCGC | + |
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Preference number: 3 (lower is better) Translates to: RGDETQGQGLSH*SSEAESQRRHR Trigger: GCGATGCCTCCTCTGGGACTCTGCTTCACTAGAGCAATGGCTGAGCCCCTGTCCCTGTGTCTCATCCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR CCA 72 bp | CTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTaGGCACCACTCCCGATGCATCAGCAGCATGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: LSPEVTPRKMGR*APLPMHQQHEG Trigger: CCCTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| 3UTR CCA 72 bp | AGGCATCGCAGGGAGCCTGGGAGGAAACCACAGAGCTaGGAAGTTCTGGAGAGCTGCTTAAAGCAGCCACTT | + |
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Preference number: 3 (lower is better) Translates to: RHRREPGRKPQS*EVLESCLKQPL Trigger: AAGTGGCTGCTTTAAGCAGCTCTCCAGAACTTCCCAGCTCTGTGGTTTCCTCCCAGGCTCCCTGCGATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR TCA 72 bp | TTTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTaGGCTGGGTCTGGGCTCCACAGGTCCATAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: FYECLRQRAARL*AGSGLHRSIER Trigger: CCTCTCTATGGACCTGTGGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR GCA 72 bp | CCAGGCTTCCTGCCAGCTCAGGGTGCCAGGGTCATCTaGATTATCATTCATCACACTTCCTTTCGCCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: PGFLPAQGARVI*IIIHHTSFRLP Trigger: TGGCAGGCGAAAGGAAGTGTGATGAATGATAATGCAGATGACCCTGGCACCCTGAGCTGGCAGGAAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CAA 90 bp | CTAAGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCGGGCCACTCCAGGGCTaGCAGGGTGCTAAGGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: LRELTKVSTLKPQSCFRTGPLQG*QGAKVQ Trigger: CTGCACCTTAGCACCCTGCAAGCCCTGGAGTGGCCC...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR GCA 72 bp | GGGAGGAAACCACAGAGCTGGGAAGTTCTGGAGAGCTaGTTAAAGCAGCCACTTGGAATCTGGATTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GRKPQSWEVLES*LKQPLGIWILL Trigger: CAGCAGAATCCAGATTCCAAGTGGCTGCTTTAAGCAGCTCTCCAGAACTTCCCAGCTCTGTGGTTTCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR GCA 72 bp | CACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTaGAGCTTAAAAACAGCAGGAGGAAAATGGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: HTSFRLPAHFQT*SLKTAGGKWQG Trigger: TCCCTGCCATTTTCCTCCTGCTGTTTTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| 3UTR-3UTR CAA 90 bp | CTTAAAAACAGCAGGAGGAAAATGGCAGGGAGTGTTCTTGCTACTATAAATCCAACTAAGGTCTCTACTTaGAAGCCTCAGTCCTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKNSRRKMAGSVLATINPTKVST*KPQSCF Trigger: AAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGT...TGGATTTATAGTAGCAAGAACACTCCCTGCCATTTTCCTCCTGCTGTTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCATCTATTCATTCAAACTGTCGCCTGTTCCTATGATAGTTTAGGAACAAAAAGGACCGTGCAGTGTTaGAATTGTCATATTAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: MHLFIQTVACSYDSLGTKRTVQC*NCHIRD Trigger: ATCTCTAATATGACAATTCAAACACTGCACGGTCCT...TTTTGTTCCTAAACTATCATAGGAACAGGCGACAGTTTGAATGAATAGATGCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS-3UTR CCA 90 bp | CCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTGACCCACAGGGCACTTGCTTGGCGGTCAGCTTCTTaGACTGCACTCCACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLAGVGRAPALTHRALAWRSAS*TALHCR Trigger: CCTACAGTGGAGTGCAGTCCAAGAAGCTGACCGCCA...AGCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTGACCCACAGGGCACTTGCTTCCCAGGCAGTTTCTTaGGCACATTTCCACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLAGVGRAPALTHRALASQAVS*AHFHMA Trigger: GGCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGA...AGCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTGACCCACAGGGCACTTGCTTTCTTCAGCTGTCTCTaGATGGCGGTCAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLAGVGRAPALTHRALAFFSCL*MAVSFL Trigger: CAAGAAGCTGACCGCCATGCAGAGACAGCTGAAGAA...AGCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCTGTAGGCCAGCAGCATaGCCCCGAACTGCCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WVWAPQVHREGMRHRDRGCRPAA*PRTASQ Trigger: CTGAGAGGCAGTTCGGGGGCATGCTGCTGGCCTACA...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCCCTTCGCCACTGTCCTaGCCACTTGCTGCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVWAPQVHREGMRHRDRGPSPLS*PLAAWS Trigger: TGACCATGCAGCAAGTGGCCAGGACAGTGGCGAAGG...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR TCA 90 bp | CCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTGACCCACAGGGCACTTGCTTGTTCTTCAGGAAAGTaGAGAAGTTCTCTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLAGVGRAPALTHRALACSSGK*RSSLPP Trigger: AGGAGGTAGAGAACTTCTTCACTTTCCTGAAGAACA...AGCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCTCTGCCGCAGCATCTaGAGCCCTTCCTTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVTPRKMGRWAPLPMHQQLCRSI*SPSFTA Trigger: AGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAG...CTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCACTCTGCCGCAGCATCTaGAGCCCTTCCTTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRGYSQKDGEVGTTPDASLCRSI*SPSFTA Trigger: AGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAG...TGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATCCTTCGCCACTGTCCTaGCCACTTGCTGCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AEPRGYSQKDGEVGTTPDPSPLS*PLAAWS Trigger: TGACCATGCAGCAAGTGGCCAGGACAGTGGCGAAGG...ATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | GCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATAGTCAGAGAAGGAGATaGGCCCACACTCTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEPRGYSQKDGEVGTTPDSQRRR*AHTLQG Trigger: GCCTTGGAGAGTGTGGGCTCATCTCCTTCTCTGACT...ATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCAAGTCAGAGAAGGAGATaGGCCCACACTCTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPRGYSQKDGEVGTTPDASQRRR*AHTLQG Trigger: GCCTTGGAGAGTGTGGGCTCATCTCCTTCTCTGACT...TGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCCTCTGCCGCAGCATCTaGAGCCCTTCCTTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTSVLDRGQLGSELGLGSLCRSI*SPSFTA Trigger: AGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAG...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CCCGGGCTGGCCGGGGTTGGGAGGGCTCCTGCACTGACCCACAGGGCACTTGCTCACTTTATCAAGAGATaGTCCAGCCATGTGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLAGVGRAPALTHRALAHFIKR*SSHVVK Trigger: TTTTACCACATGGCTGGAGCATCTCTTGATAAAGTG...AGCAAGTGCCCTGTGGGTCAGTGCAGGAGCCCTCCCAACCCCGGCCAGCCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGCATTTCCACATGGCCTaGATGAGGCGGGTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPERWGGGHHSRCISSMKHFHMA*MRRVKP Trigger: GGGCTTCACCCGCCTCATGCAGGCCATGTGGAAATG...CTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | GCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGAGCGAATGATGCTCTaGACCTGCTCAAACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AEPRGYSQKDGEVGTTPDERMML*TCSNSS Trigger: GGAGGAGTTTGAGCAGGTTCAGAGCATCATTCGCTC...ATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATGGTCTGGGAGCGAATaGTGCTCTGAACCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EPRGYSQKDGEVGTTPDAWSGSE*CSEPAQ Trigger: TTGAGCAGGTTCAGAGCATCATTCGCTCCCAGACCA...TGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCAGGAGACCGGTACTTaGAGTCACTGCAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVTPRKMGRWAPLPMHQQQETGT*SHCRCS Trigger: GGAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTG...CTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCAGCATGGTGGAGATTCTaGGTGAGCCTTCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EPRGYSQKDGEVGTTPDAAWWRF*VSLLPQ Trigger: CTGTGGAAGAAGGCTCACGCAGAATCTCCACCATGC...TGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCTTCTTCAGCTGTCTCTaGATGGCGGTCAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WVWAPQVHREGMRHRDRGFFSCL*MAVSFL Trigger: CAAGAAGCTGACCGCCATGCAGAGACAGCTGAAGAA...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCAGGCCCAAGTGTTCTaGCTGCTTCTCATTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EVTPRKMGRWAPLPMHQQQAQVF*LLLIGR Trigger: ACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTG...CTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCTGGCGGTCAGCTTCTTaGACTGCACTCCACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPERWGGGHHSRCISSWRSAS*TALHCR Trigger: CCTACAGTGGAGTGCAGTCCAAGAAGCTGACCGCCA...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGCCTTCGCCACTGTCCTaGCCACTTGCTGCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMPSPLS*PLAAWS Trigger: TGACCATGCAGCAAGTGGCCAGGACAGTGGCGAAGG...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGGAGCGAATGATGCTCTaGACCTGCTCAAACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPERWGGGHHSRCISSMKERMML*TCSNSS Trigger: GGAGGAGTTTGAGCAGGTTCAGAGCATCATTCGCTC...CTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCTGGTCTGGGAGCGAATaGTGCTCTGAACCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLLPERWGGGHHSRCISSWSGSE*CSEPAQ Trigger: TTGAGCAGGTTCAGAGCATCATTCGCTCCCAGACCA...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCGGCCCTTCCCATCTTTaGAGTGCTTCTTCAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLLPERWGGGHHSRCISSGPSHL*SASSAV Trigger: GACAGCTGAAGAAGCACTTCAAAGATGGGAAGGGCC...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS-3UTR TCA 90 bp | CCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGGCCCTTCCCATCTTTaGAGTGCTTCTTCAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGYSQKDGEVGTTPDASGPSHL*SASSAV Trigger: GACAGCTGAAGAAGCACTTCAAAGATGGGAAGGGCC...TGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGCAGGAGACCGGTACTTaGAGTCACTGCAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMQETGT*SHCRCS Trigger: GGAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTG...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCGTCCTGGCCACTTGCTaGATGGTCACTTTATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVWAPQVHREGMRHRDRGVLATC*MVTLSR Trigger: TCTTGATAAAGTGACCATGCAGCAAGTGGCCAGGAC...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCATCAGCTGTCTCTGCATaGCGGTCAGCTTCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PRGYSQKDGEVGTTPDASSAVSA*RSASWT Trigger: AGTCCAAGAAGCTGACCGCCATGCAGAGACAGCTGA...TGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCGAGCGAATGATGCTCTaGACCTGCTCAAACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTSVLDRGQLGSELGLGSERMML*TCSNSS Trigger: GGAGGAGTTTGAGCAGGTTCAGAGCATCATTCGCTC...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGAACATAAGCCAGACTTaGGGGTGTTCCCAGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPERWGGGHHSRCISSMKNISQT*GCSQWL Trigger: CAACCACTGGGAACACCCTCAAGTCTGGCTTATGTT...CTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAAACATAAGCCAGACTTaGGGGTGTTCCCAGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRGYSQKDGEVGTTPDASNISQT*GCSQWL Trigger: CAACCACTGGGAACACCCTCAAGTCTGGCTTATGTT...TGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGGCCCTTCCCATCTTTaGAGTGCTTCTTCAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPRKMGRWAPLPMHQQHEGPSHL*SASSAV Trigger: GACAGCTGAAGAAGCACTTCAAAGATGGGAAGGGCC...TTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCACCCAAGTGTTCTGGCTaGTTCTCATTGGGCGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: PRGYSQKDGEVGTTPDASPKCSG*FSLGVM Trigger: CATAACGCCCAATGAGAAGCAGCCAGAACACTTGGG...TGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | GCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGTCCTGGCCACTTGCTaGATGGTCACTTTATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEPRGYSQKDGEVGTTPDVLATC*MVTLSR Trigger: TCTTGATAAAGTGACCATGCAGCAAGTGGCCAGGAC...ATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCAACTGTCCTGGCCACTTaGTGCATGGTCACTTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: EPRGYSQKDGEVGTTPDATVLAT*CMVTLS Trigger: TGATAAAGTGACCATGCAGCAAGTGGCCAGGACAGT...TGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCCCTCTCATCAGCCGCTaGTTCATGATGGAAACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLPERWGGGHHSRCISSPLISR*FMMETN Trigger: GTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGG...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCTCCCAGGCAGTTTCTTaGGCACATTTCCACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTSVLDRGQLGSELGLGSSQAVS*AHFHMA Trigger: GGCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGA...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCTGGAGAGGACTGTTGTaGGGAAGATGTAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLPERWGGGHHSRCISSWRGLL*GRCSQR Trigger: TCTCTGACTACATCTTCCTCACAACAGTCCTCTCCA...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGTGGAGAGGACTGTTGTaGGGAAGATGTAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPERWGGGHHSRCISSMKWRGLL*GRCSQR Trigger: TCTCTGACTACATCTTCCTCACAACAGTCCTCTCCA...CTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | GCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATCGTCATGCTGAAGTTTaGGCTGAAATTCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AEPRGYSQKDGEVGTTPDRHAEV*AEIPGS Trigger: ACTTCCTGGAATTTCAGCGCAAACTTCAGCATGACG...ATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCTTCTTCAGCTGTCTCTaGATGGCGGTCAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTSVLDRGQLGSELGLGSFFSCL*MAVSFL Trigger: CAAGAAGCTGACCGCCATGCAGAGACAGCTGAAGAA...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGACTGTCCTGGCCACTTaGTGCATGGTCACTTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: EVTPRKMGRWAPLPMHQQTVLAT*CMVTLS Trigger: TGATAAAGTGACCATGCAGCAAGTGGCCAGGACAGT...CTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGTGGAGAGGACTGTTGTaGGGAAGATGTAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMWRGLL*GRCSQR Trigger: TCTCTGACTACATCTTCCTCACAACAGTCCTCTCCA...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGCGTCATGCTGAAGTTTaGGCTGAAATTCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPERWGGGHHSRCISSMKRHAEV*AEIPGS Trigger: ACTTCCTGGAATTTCAGCGCAAACTTCAGCATGACG...CTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGGTCCTGGCCACTTGCTaGATGGTCACTTTATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMVLATC*MVTLSR Trigger: TCTTGATAAAGTGACCATGCAGCAAGTGGCCAGGAC...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGACTGTCCTGGCCACTTaGTGCATGGTCACTTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMTVLAT*CMVTLS Trigger: TGATAAAGTGACCATGCAGCAAGTGGCCAGGACAGT...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATAAATTTTGTCTGGTGTaGAGTAGGCTCGGATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AEPRGYSQKDGEVGTTPDKFCLV*SRLGFD Trigger: ATCGAATCCGAGCCTACTCCACACCAGACAAAATTT...ATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | GGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATCGGAAAATTTTGTCTaGTGTGGAGTAGGCTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GYSQKDGEVGTTPDASAASENFV*CGVGSD Trigger: ATCCGAGCCTACTCCACACCAGACAAAATTTTCCGA...TGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCATCGGAAAATTTTGTCTaGTGTGGAGTAGGCTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRGYSQKDGEVGTTPDASSENFV*CGVGSD Trigger: ATCCGAGCCTACTCCACACCAGACAAAATTTTCCGA...TGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCAAATTTTTCTCGTTCCTaGGCAATTTTCTCGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPRGYSQKDGEVGTTPDANFSRS*AIFSVC Trigger: GCAGACCGAGAAAATTGCCCAGGAACGAGAAAAATT...TGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020311.13 |
||
| CDS-3UTR TCA 90 bp | GGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATTTCACCAGGTTCGTTaGTTACTTTCAAGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GYSQKDGEVGTTPDASAAFHQVR*LLSRWQ Trigger: TTGCCACCTTGAAAGTAATCAACGAACCTGGTGAAA...TGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGCGCTTTATTATATACTaGTCCAGGCCCAAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPERWGGGHHSRCISSMKRFIIY*SRPKCS Trigger: AGAACACTTGGGCCTGGATCAGTATATAATAAAGCG...CTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCAATTTCAAAATTTCTCTaGGGAGTGGAGAGGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EPRGYSQKDGEVGTTPDAISKFL*GVERTV Trigger: AACAGTCCTCTCCACTCCTCAGAGAAATTTTGAAAT...TGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAAACAGCAGGAGGATGCAGTCACTGCAGATaGTCCCAGGAACGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFRLPAHFQTCSLKTAGGCSHCR*SQERHQ Trigger: CTGGTGGCGTTCCTGGGAGCATCTGCAGTGACTGCA...TCCTCCTGCTGTTTTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCCTCTGCCGCAGCATCTaGAGCCCTTCCTTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGELTKVSTLKPQSCFRTLCRSI*SPSFTA Trigger: AGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAG...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTTCTTGCTACTATAAATCCACAGCGAGAGACAGATGTCAGAGCAGAGCATGTAGGCCAGCAGCATaGCCCCGAACTGCCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ECSCYYKSTARDRCQSRACRPAA*PRTASQ Trigger: CTGAGAGGCAGTTCGGGGGCATGCTGCTGGCCTACA...TGCTCTGCTCTGACATCTGTCTCTCGCTGTGGATTTATAGTAGCAAGAACACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCACATTTCCACATGGCCTaGATGAGGCGGGTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAHFHMA*MRRVKP Trigger: GGGCTTCACCCGCCTCATGCAGGCCATGTGGAAATG...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS-3UTR GCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGTCCTGGGCAATTTTCTaGCAGAACTCCTTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMSWAIF*QNSFPS Trigger: TGATGGAAAGGAGTTCTGGCAGAAAATTGCCCAGGA...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092508.12 |
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| CDS-3UTR GCA 90 bp | CAAACTGTCGCCTGTTCCTATGATAGTTTAGGAACAAAACAACCCAAACAATACGGGAGGCCAGAGGCATaGACCGACCCCCAGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QTVACSYDSLGTKQPKQYGRPEA*TDPQPR Trigger: CCGAGGCTGGGGGTCGGTGCATGCCTCTGGCCTCCC...GTATTGTTTGGGTTGTTTTGTTCCTAAACTATCATAGGAACAGGCGACAGTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
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| CDS-3UTR CCA 90 bp | CTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGAAATTTTGTCTGGTGTaGAGTAGGCTCGGATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPERWGGGHHSRCISSMKKFCLV*SRLGFD Trigger: ATCGAATCCGAGCCTACTCCACACCAGACAAAATTT...CTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS-3UTR CCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCACCTTCGCCACTGTCCTaGCCACTTGCTGCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAPSPLS*PLAAWS Trigger: TGACCATGCAGCAAGTGGCCAGGACAGTGGCGAAGG...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGTTTCACCAGGTTCGTTaGTTACTTTCAAGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMFHQVR*LLSRWQ Trigger: TTGCCACCTTGAAAGTAATCAACGAACCTGGTGAAA...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS-3UTR TCA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCTTTCACCAGGTTCGTTaGTTACTTTCAAGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTSVLDRGQLGSELGLGSFHQVR*LLSRWQ Trigger: TTGCCACCTTGAAAGTAATCAACGAACCTGGTGAAA...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| CDS-3UTR TCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGTGTTCTTCAGGAAAGTaGAGAAGTTCTCTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMCSSGK*RSSLPP Trigger: AGGAGGTAGAGAACTTCTTCACTTTCCTGAAGAACA...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS-3UTR GCA 90 bp | GAGTGTTCTTGCTACTATAAATCCACAGCGAGAGACAGATGTCAGAGCAGAGCATGCAGTCACTGCAGATaGTCCCAGGAACGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ECSCYYKSTARDRCQSRACSHCR*SQERHQ Trigger: CTGGTGGCGTTCCTGGGAGCATCTGCAGTGACTGCA...TGCTCTGCTCTGACATCTGTCTCTCGCTGTGGATTTATAGTAGCAAGAACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| CDS-3UTR GCA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTGCAGTCACTGCAGATaGTCCCAGGAACGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGELTKVSTLKPQSCFRTCSHCR*SQERHQ Trigger: CTGGTGGCGTTCCTGGGAGCATCTGCAGTGACTGCA...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGGGCTGTAGAAGATGCTaGCTTCATCAGCAAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPERWGGGHHSRCISSMKGCRRC*LHQQIF Trigger: AAAAATTTGCTGATGAAGGCAGCATCTTCTACAGCC...CTTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCGGCTGTAGAAGATGCTaGCTTCATCAGCAAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLPERWGGGHHSRCISSGCRRC*LHQQIF Trigger: AAAAATTTGCTGATGAAGGCAGCATCTTCTACAGCC...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGGCTGTAGAAGATGCTaGCTTCATCAGCAAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRGYSQKDGEVGTTPDASGCRRC*LHQQIF Trigger: AAAAATTTGCTGATGAAGGCAGCATCTTCTACAGCC...TGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS-3UTR GCA 90 bp | CTAAGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTGTAGGCCAGCAGCATaGCCCCGAACTGCCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRELTKVSTLKPQSCFRTCRPAA*PRTASQ Trigger: CTGAGAGGCAGTTCGGGGGCATGCTGCTGGCCTACA...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
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| CDS-3UTR GCA 90 bp | GAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCACTTTATCAAGAGATaGTCCAGCCATGTGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVTPRKMGRWAPLPMHQQHFIKR*SSHVVK Trigger: TTTTACCACATGGCTGGAGCATCTCTTGATAAAGTG...CTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAAACAGCAGGAGGACAGGCCCAAGTGTTCTaGCTGCTTCTCATTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SFRLPAHFQTCSLKTAGGQAQVF*LLLIGR Trigger: ACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTG...TCCTCCTGCTGTTTTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | GGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCAAATTTTTCTCGTTCCTaGGCAATTTTCTGCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GYSQKDGEVGTTPDASAANFSRS*AIFCQN Trigger: GTTCTGGCAGAAAATTGCCCAGGAACGAGAAAAATT...TGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092508.12 |
||
| CDS-3UTR TCA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGATTTCAAAATTTCTCTaGGGAGTGGAGAGGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPERWGGGHHSRCISSMISKFL*GVERTV Trigger: AACAGTCCTCTCCACTCCTCAGAGAAATTTTGAAAT...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAATTTCAAAATTTCTCTaGGGAGTGGAGAGGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPRKMGRWAPLPMHQQHEISKFL*GVERTV Trigger: AACAGTCCTCTCCACTCCTCAGAGAAATTTTGAAAT...TTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCATGGTCTGGGAGCGAATaGTGCTCTGAACCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAWSGSE*CSEPAQ Trigger: TTGAGCAGGTTCAGAGCATCATTCGCTCCCAGACCA...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAATGCAGTCACTGCAGATaGTCCCAGGAACGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSHFLSPASSFPNLQLKCSHCR*SQERHQ Trigger: CTGGTGGCGTTCCTGGGAGCATCTGCAGTGACTGCA...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTTCTTGCTACTATAAATCCACAGCGAGAGACAGATGTCAGAGCAGAGCAGGTACTTGCAGTCACTaGAGATGCTCCCAGGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: ECSCYYKSTARDRCQSRAGTCSH*RCSQER Trigger: GCGTTCCTGGGAGCATCTGCAGTGACTGCAAGTACC...TGCTCTGCTCTGACATCTGTCTCTCGCTGTGGATTTATAGTAGCAAGAACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCCAGGAGACCGGTACTTaGAGTCACTGCAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGELTKVSTLKPQSCFRTQETGT*SHCRCS Trigger: GGAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTG...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCAGCATGGTGGAGATTCTaGGTGAGCCTTCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAAWWRF*VSLLPQ Trigger: CTGTGGAAGAAGGCTCACGCAGAATCTCCACCATGC...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAACACTTTATCAAGAGATaGTCCAGCCATGTGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPRKMGRWAPLPMHQQHEHFIKR*SSHVVK Trigger: TTTTACCACATGGCTGGAGCATCTCTTGATAAAGTG...TTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCCATTTCCACATGGCCTaGATGAGGCGGGTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRELTKVSTLKPQSCFRTHFHMA*MRRVKP Trigger: GGGCTTCACCCGCCTCATGCAGGCCATGTGGAAATG...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| 3UTR CAA 72 bp | AGAGGGCAGCTAGGGGAGTTAACTAAGGTCTCTACTTaGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGQLGELTKVST*KPQSCFRTFHP Trigger: CGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAGCTGCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAAGTCAGAGAAGGAGATaGGCCCACACTCTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSSHFLSPASSFPNLQLKSQRRR*AHTLQG Trigger: GCCTTGGAGAGTGTGGGCTCATCTCCTTCTCTGACT...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCGAGCGAATGATGCTCTaGACCTGCTCAAACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGELTKVSTLKPQSCFRTERMML*TCSNSS Trigger: GGAGGAGTTTGAGCAGGTTCAGAGCATCATTCGCTC...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAACAGGAGACCGGTACTTaGAGTCACTGCAGATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSHFLSPASSFPNLQLKQETGT*SHCRCS Trigger: GGAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTG...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | GCTATAATTAAAGTGATATTTTACGAGTGTCTTAGACAGAGGGCAGCTAGGGGATGTAGGCCAGCAGCATaGCCCCGAACTGCCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIIKVIFYECLRQRAARGCRPAA*PRTASQ Trigger: CTGAGAGGCAGTTCGGGGGCATGCTGCTGGCCTACA...TCCCCTAGCTGCCCTCTGTCTAAGACACTCGTAAAATATCACTTTAATTATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCATTCTTCAGCTGTCTCTaGATGGCGGTCAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAFFSCL*MAVSFL Trigger: CAAGAAGCTGACCGCCATGCAGAGACAGCTGAAGAA...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTCCCTCTGAGTTAGAGCGGGTTCTACATTCTCAAGGACCGTGCAGTGTTATCGAAAGCACATGCTaGCGAGTCAGTACCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KFPSELERVLHSQGPCSVIESTC*RVSTCQ Trigger: CTGGCAGGTACTGACTCGGCAGCATGTGCTTTCGAT...AACACTGCACGGTCCTTGAGAATGTAGAACCCGCTCTAACTCAGAGGGAAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS-3UTR CCA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAACAGGCCCAAGTGTTCTaGCTGCTTCTCATTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSHFLSPASSFPNLQLKQAQVF*LLLIGR Trigger: ACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTG...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTGGCGGTCAGCTTCTTaGACTGCACTCCACTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRELTKVSTLKPQSCFRTWRSAS*TALHCR Trigger: CCTACAGTGGAGTGCAGTCCAAGAAGCTGACCGCCA...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTCCCAGGCAGTTTCTTaGGCACATTTCCACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGELTKVSTLKPQSCFRTSQAVS*AHFHMA Trigger: GGCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGA...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGTTCTTGCTACTATAAATCCACAGCGAGAGACAGATGTCAGAGCAGAGCAAACATAAGCCAGACTTaGGGGTGTTCCCAGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ECSCYYKSTARDRCQSRANISQT*GCSQWL Trigger: CAACCACTGGGAACACCCTCAAGTCTGGCTTATGTT...TGCTCTGCTCTGACATCTGTCTCTCGCTGTGGATTTATAGTAGCAAGAACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAGCATGGTGGAGATTCTaGGTGAGCCTTCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSHFLSPASSFPNLQLKAWWRF*VSLLPQ Trigger: CTGTGGAAGAAGGCTCACGCAGAATCTCCACCATGC...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTTCTTGCTACTATAAATCCACAGCGAGAGACAGATGTCAGAGCAGAGCACCCAAGTGTTCTGGCTaGTTCTCATTGGGCGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: ECSCYYKSTARDRCQSRAPKCSG*FSLGVM Trigger: CATAACGCCCAATGAGAAGCAGCCAGAACACTTGGG...TGCTCTGCTCTGACATCTGTCTCTCGCTGTGGATTTATAGTAGCAAGAACACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCCCCAAGTGTTCTGGCTaGTTCTCATTGGGCGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LGELTKVSTLKPQSCFRTPKCSG*FSLGVM Trigger: CATAACGCCCAATGAGAAGCAGCCAGAACACTTGGG...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCCCTCTCATCAGCCGCTaGTTCATGATGGAAACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGELTKVSTLKPQSCFRTPLISR*FMMETN Trigger: GTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGG...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | GCTATAATTAAAGTGATATTTTACGAGTGTCTTAGACAGAGGGCAGCTAGGGGACATTTCCACATGGCCTaGATGAGGCGGGTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AIIKVIFYECLRQRAARGHFHMA*MRRVKP Trigger: GGGCTTCACCCGCCTCATGCAGGCCATGTGGAAATG...TCCCCTAGCTGCCCTCTGTCTAAGACACTCGTAAAATATCACTTTAATTATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTCCCTCTGAGTTAGAGCGGGTTCTACATTCTCAAGGACCGTGCAGTGTTTGCCGAGTCAGTACCTaGCAGAACTCCTTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KFPSELERVLHSQGPCSVCRVST*QNSFPS Trigger: TGATGGAAAGGAGTTCTGGCAGGTACTGACTCGGCA...AACACTGCACGGTCCTTGAGAATGTAGAACCCGCTCTAACTCAGAGGGAAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS-3UTR CCA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAATCAGCTGTCTCTGCATaGCGGTCAGCTTCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HSSHFLSPASSFPNLQLKSAVSA*RSASWT Trigger: AGTCCAAGAAGCTGACCGCCATGCAGAGACAGCTGA...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | ATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTATCAGCTGTCTCTGCATaGCGGTCAGCTTCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IIHHTSFRLPAHFQTCSLSAVSA*RSASWT Trigger: AGTCCAAGAAGCTGACCGCCATGCAGAGACAGCTGA...TAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | ATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTATCCCAGGCAGTTTCTTaGGCACATTTCCACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IIHHTSFRLPAHFQTCSLSQAVS*AHFHMA Trigger: GGCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGA...TAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAACAGCAGGAGGAAAATGGCAGGGAGTGTTCTTGCTACTATAAATCCAAGTCAGAGAAGGAGATaGGCCCACACTCTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKNSRRKMAGSVLATINPSQRRR*AHTLQG Trigger: GCCTTGGAGAGTGTGGGCTCATCTCCTTCTCTGACT...TGGATTTATAGTAGCAAGAACACTCCCTGCCATTTTCCTCCTGCTGTTTTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTGGAGAGGACTGTTGTaGGGAAGATGTAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGELTKVSTLKPQSCFRTWRGLL*GRCSQR Trigger: TCTCTGACTACATCTTCCTCACAACAGTCCTCTCCA...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCCCCAAGTGTTCTGGCTaGTTCTCATTGGGCGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LRELTKVSTLKPQSCFRTPKCSG*FSLGVM Trigger: CATAACGCCCAATGAGAAGCAGCCAGAACACTTGGG...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCACGTCATGCTGAAGTTTaGGCTGAAATTCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTARHAEV*AEIPGS Trigger: ACTTCCTGGAATTTCAGCGCAAACTTCAGCATGACG...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | ATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTACCTCTCATCAGCCGCTaGTTCATGATGGAAACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IIHHTSFRLPAHFQTCSLPLISR*FMMETN Trigger: GTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGG...TAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAACCTCTCATCAGCCGCTaGTTCATGATGGAAACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSHFLSPASSFPNLQLKPLISR*FMMETN Trigger: GTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGG...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CCA 90 bp | GCTATAATTAAAGTGATATTTTACGAGTGTCTTAGACAGAGGGCAGCTAGGGGACAGGCCCAAGTGTTCTaGCTGCTTCTCATTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AIIKVIFYECLRQRAARGQAQVF*LLLIGR Trigger: ACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTG...TCCCCTAGCTGCCCTCTGTCTAAGACACTCGTAAAATATCACTTTAATTATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCATTTCACCAGGTTCGTTaGTTACTTTCAAGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAFHQVR*LLSRWQ Trigger: TTGCCACCTTGAAAGTAATCAACGAACCTGGTGAAA...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCATGTTCTTCAGGAAAGTaGAGAAGTTCTCTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTACSSGK*RSSLPP Trigger: AGGAGGTAGAGAACTTCTTCACTTTCCTGAAGAACA...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCAGGCTGTAGAAGATGCTaGCTTCATCAGCAAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAGCRRC*LHQQIF Trigger: AAAAATTTGCTGATGAAGGCAGCATCTTCTACAGCC...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCCGTCATGCTGAAGTTTaGGCTGAAATTCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRELTKVSTLKPQSCFRTRHAEV*AEIPGS Trigger: ACTTCCTGGAATTTCAGCGCAAACTTCAGCATGACG...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTGTCGCCTGTTCCTATGATAGTTTAGGAACAAAACAACCCAAACAATACCCCAAGTGTTCTGGCTaGTTCTCATTGGGCGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: QTVACSYDSLGTKQPKQYPKCSG*FSLGVM Trigger: CATAACGCCCAATGAGAAGCAGCCAGAACACTTGGG...GTATTGTTTGGGTTGTTTTGTTCCTAAACTATCATAGGAACAGGCGACAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS-3UTR CCA 90 bp | ATGCATCTATTCATTCAAACTGTCGCCTGTTCCTATGATAGTTTAGGAACAAAACAGGCCCAAGTGTTCTaGCTGCTTCTCATTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: MHLFIQTVACSYDSLGTKQAQVF*LLLIGR Trigger: ACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTG...TTTTGTTCCTAAACTATCATAGGAACAGGCGACAGTTTGAATGAATAGATGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS-3UTR TCA 90 bp | ATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAATTTCAAAATTTCTCTaGGGAGTGGAGAGGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IIHHTSFRLPAHFQTCSLISKFL*GVERTV Trigger: AACAGTCCTCTCCACTCCTCAGAGAAATTTTGAAAT...TAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTGTCGCCTGTTCCTATGATAGTTTAGGAACAAAACAACCCAAACAATACTTAATCGAAAGCACATaGTGCCGAGTCAGTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVACSYDSLGTKQPKQYLIEST*CRVSTC Trigger: GCAGGTACTGACTCGGCAGCATGTGCTTTCGATTAA...GTATTGTTTGGGTTGTTTTGTTCCTAAACTATCATAGGAACAGGCGACAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS-3UTR TCA 90 bp | GCTATAATTAAAGTGATATTTTACGAGTGTCTTAGACAGAGGGCAGCTAGGGGATGTTCTTCAGGAAAGTaGAGAAGTTCTCTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AIIKVIFYECLRQRAARGCSSGK*RSSLPP Trigger: AGGAGGTAGAGAACTTCTTCACTTTCCTGAAGAACA...TCCCCTAGCTGCCCTCTGTCTAAGACACTCGTAAAATATCACTTTAATTATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAACAGCAGGAGGAAAATGGCAGGGAGTGTTCTTGCTACTATAAATCCAAAATTTTGTCTGGTGTaGAGTAGGCTCGGATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKNSRRKMAGSVLATINPKFCLV*SRLGFD Trigger: ATCGAATCCGAGCCTACTCCACACCAGACAAAATTT...TGGATTTATAGTAGCAAGAACACTCCCTGCCATTTTCCTCCTGCTGTTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCAGTGAAGCCCATGTCCTaGGGCTTCTCCAGGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EPRGYSQKDGEVGTTPDAVKPMS*GFSRPL Trigger: GAGAGGCCTGGAGAAGCCCAAGGACATGGGCTTCAC...TGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCACAGGAGACCGGTACTaGCAGTCACTGCAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVWAPQVHREGMRHRDRGTGDRY*QSLQML Trigger: GAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTGT...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGGGGTGTTCCCAGTGGTaGGACGGTCTCTGTGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVTPRKMGRWAPLPMHQQGCSQW*DGLCDA Trigger: TGCGTCACAGAGACCGTCCAACCACTGGGAACACCC...CTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGGTGAAGCCCATGTCCTaGGGCTTCTCCAGGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVTPRKMGRWAPLPMHQQVKPMS*GFSRPL Trigger: GAGAGGCCTGGAGAAGCCCAAGGACATGGGCTTCAC...CTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS GCA 90 bp | TGGCGGTCAGCTTCTTGGACTGCACTCCACTGTAGGCCAGCAGCATaGCCCCGAACTGCCTCTCAGAGATTCTCCCATCTACCGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WRSASWTALHCRPAA*PRTASQRFSHLPGH Trigger: ATGACCCGGTAGATGGGAGAATCTCTGAGAGGCAGTTCGGGGGCATGCTGCTGGCCTACAGTGGAGTGCAGTCCAAGAAGCTGACCGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGGGGTGTTCCCAGTGGTaGGACGGTCTCTGTGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPERWGGGHHSRCISSMGCSQW*DGLCDA Trigger: TGCGTCACAGAGACCGTCCAACCACTGGGAACACCC...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS GCA 90 bp | AGAGCAAAGTCCCAGGCAGTTTCTTGGGCACATTTCCACATGGCCTaGATGAGGCGGGTGAAGCCCATGTCCTTGGGCTTCTCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RAKSQAVSWAHFHMA*MRRVKPMSLGFSRP Trigger: AGGCCTGGAGAAGCCCAAGGACATGGGCTTCACCCGCCTCATGCAGGCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGACTTTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS CCA 90 bp | CCATTGCCATCACAGTCAAAGAGCGCGAACACCACGTCACACACATaGTCCGAGAGTTCGACCTTCGCCACTGTCCTGGCCACTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPSQSKSANTTSHT*SESSTFATVLATCC Trigger: GCAGCAAGTGGCCAGGACAGTGGCGAAGGTCGAACTCTCGGACCATGTGTGTGACGTGGTGTTCGCGCTCTTTGACTGTGATGGCAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | GGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCAACAGGAGACCGGTACTaGCAGTCACTGCAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GYSQKDGEVGTTPDASAATGDRY*QSLQML Trigger: GAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTGT...TGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCACAGGAGACCGGTACTaGCAGTCACTGCAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLLPERWGGGHHSRCISSTGDRY*QSLQML Trigger: GAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTGT...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | GCTGAGCCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATTTGCTCAGCTCCCCATaGCCATCACAGTCAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AEPRGYSQKDGEVGTTPDLLSSP*PSQSKS Trigger: GCTCTTTGACTGTGATGGCAATGGGGAGCTGAGCAA...ATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTCTGGGCTCCACAGGTCCATAGAGAGGGGATGAGACACAGGGACAGGGGCATGGAAACGAACTCCTaGTTGCTCAGCTCCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: WVWAPQVHREGMRHRDRGMETNS*LLSSPL Trigger: CAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCAT...GCCCCTGTCCCTGTGTCTCATCCCCTCTCTATGGACCTGTGGAGCCCAGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGTCCCAGGCAGTTTCTaGGGCACATTTCCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRGYSQKDGEVGTTPDASVPGSF*GTFPHG Trigger: GCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGAC...TGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS GCA 90 bp | TCTGAATCCAGAGCGCTTCTTCTTCTTGTCCTCAGGATAAGGCTCTaGCGCAGCATCTGCAGCCCTTCCTTCACGGCTGGACACTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SESRALLLLVLRIRL*RSICSPSFTAGHFP Trigger: GGGGAAGTGTCCAGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAGCCTTATCCTGAGGACAAGAAGAAGAAGCGCTCTGGATTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS CCA 90 bp | ATGCTCCCAGGAACGCCACCAGCATCAATCTTCGTTTGGTCTGTGTaGGCTGTGATGCCCCATGGTACCAGCGAGAGCCCACAGCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MLPGTPPASIFVWSV*AVMPHGTSESPQLV Trigger: AACTAGCTGTGGGCTCTCGCTGGTACCATGGGGCATCACAGCCCACACAGACCAAACGAAGATTGATGCTGGTGGCGTTCCTGGGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGACAGGAGACCGGTACTaGCAGTCACTGCAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPERWGGGHHSRCISSMTGDRY*QSLQML Trigger: GAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTGT...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | GGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCACACTGTCCTGGCCACTaGCTGCATGGTCACTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GYSQKDGEVGTTPDASAAHCPGH*LHGHFI Trigger: GATAAAGTGACCATGCAGCAAGTGGCCAGGACAGTG...TGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | TTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGGTCCCAGGCAGTTTCTaGGGCACATTTCCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLPERWGGGHHSRCISSMVPGSF*GTFPHG Trigger: GCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGAC...CATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS TCA 90 bp | TTGGACGGTCTCTGTGACGCATGCCCATGCTGGTCTGGGAGCGAATaGTGCTCTGAACCTGCTCAAACTCCTCCATGTCTACCTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LDGLCDACPCWSGSE*CSEPAQTPPCLPLR Trigger: ACGGAGAGGTAGACATGGAGGAGTTTGAGCAGGTTCAGAGCATCATTCGCTCCCAGACCAGCATGGGCATGCGTCACAGAGACCGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS TCA 90 bp | CCATGTCCTTGGGCTTCTCCAGGCCTCTCATCAGCCGCTGCTTCATaGTGGAAACGAACTCCTTGTTGCTCAGCTCCCCATTGCCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: PCPWASPGLSSAAAS*WKRTPCCSAPHCHH Trigger: GTGATGGCAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGGCCTGGAGAAGCCCAAGGACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS GCA 90 bp | GTGAAGCCCATGTCCTTGGGCTTCTCCAGGCCTCTCATCAGCCGCTaGTTCATGATGGAAACGAACTCCTTGTTGCTCAGCTCCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VKPMSLGFSRPLISR*FMMETNSLLLSSPL Trigger: CAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGGCCTGGAGAAGCCCAAGGACATGGGCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS CCA 90 bp | ACCAGCATCAATCTTCGTTTGGTCTGTGTGGGCTGTGATGCCCCATaGTACCAGCGAGAGCCCACAGCTAGTTCTGCCAACGCAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSINLRLVCVGCDAP*YQREPTASSANAER Trigger: CCTTTCTGCGTTGGCAGAACTAGCTGTGGGCTCTCGCTGGTACCATGGGGCATCACAGCCCACACAGACCAAACGAAGATTGATGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS CCA 90 bp | CCACGTCACACACATGGTCCGAGAGTTCGACCTTCGCCACTGTCCTaGCCACTTGCTGCATGGTCACTTTATCAAGAGATGCTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRHTHGPRVRPSPLS*PLAAWSLYQEMLQP Trigger: TGGCTGGAGCATCTCTTGATAAAGTGACCATGCAGCAAGTGGCCAGGACAGTGGCGAAGGTCGAACTCTCGGACCATGTGTGTGACGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCTCTGTGTCAGGCTTCTaGCTGTTAACGCATGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLLPERWGGGHHSRCISSSVSGF*LLTHGG Trigger: TCCACCATGCGTTAACAGCAAGAAGCCTGACACAGA...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCCACTGTCCTGGCCACTaGCTGCATGGTCACTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: FTSVLDRGQLGSELGLGSHCPGH*LHGHFI Trigger: GATAAAGTGACCATGCAGCAAGTGGCCAGGACAGTG...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | TTTACGAGTGTCTTAGACAGAGGGCAGCTAGGCTCTGAGCTGGGTCTGGGCTCCTTGCTCAGCTCCCCATaGCCATCACAGTCAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FTSVLDRGQLGSELGLGSLLSSP*PSQSKS Trigger: GCTCTTTGACTGTGATGGCAATGGGGAGCTGAGCAA...GGAGCCCAGACCCAGCTCAGAGCCTAGCTGCCCTCTGTCTAAGACACTCGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAATTGCTCAGCTCCCCATaGCCATCACAGTCAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPRKMGRWAPLPMHQQHELLSSP*PSQSKS Trigger: GCTCTTTGACTGTGATGGCAATGGGGAGCTGAGCAA...TTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGATGGAAACGAACTCCTaGTTGCTCAGCTCCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: EVTPRKMGRWAPLPMHQQMETNS*LLSSPL Trigger: CAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCAT...CTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS GCA 90 bp | TTCTGCGTGAGCCTTCTTCCACAGGAGACCGGTACTTGCAGTCACTaGAGATGCTCCCAGGAACGCCACCAGCATCAATCTTCGTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FCVSLLPQETGTCSH*RCSQERHQHQSSFG Trigger: ACCAAACGAAGATTGATGCTGGTGGCGTTCCTGGGAGCATCTGCAGTGACTGCAAGTACCGGTCTCCTGTGGAAGAAGGCTCACGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS TCA 90 bp | CACCGACCCCCAGCCTCGGAAGCATTAACATGGATTCCAGAGCAGTaGTTAATCGAAAGCACATGCTGCCGAGTCAGTACCTGCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HRPPASEALTWIPEQ*LIESTCCRVSTCQN Trigger: GTTCTGGCAGGTACTGACTCGGCAGCATGTGCTTTCGATTAATCACTGCTCTGGAATCCATGTTAATGCTTCCGAGGCTGGGGGTCGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS CCA 90 bp | CAGGATAAGGCTCTGCCGCAGCATCTGCAGCCCTTCCTTCACGGCTaGACACTTCCCCGCTGTCTTTGTTTCTCTCTTTATCTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QDKALPQHLQPFLHG*TLPRCLCFSLYLLC Trigger: ACACAGAAGATAAAGAGAGAAACAAAGACAGCGGGGAAGTGTCCAGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAGCCTTATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCAGTGAAGCCCATGTCCTaGGGCTTCTCCAGGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAVKPMS*GFSRPL Trigger: GAGAGGCCTGGAGAAGCCCAAGGACATGGGCTTCAC...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS TCA 90 bp | TCTGTGTCAGGCTTCTTGCTGTTAACGCATGGTGGAGATTCTGCGTaGGCCTTCTTCCACAGGAGACCGGTACTTGCAGTCACTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVSGFLLLTHGGDSA*AFFHRRPVLAVTAD Trigger: ATCTGCAGTGACTGCAAGTACCGGTCTCCTGTGGAAGAAGGCTCACGCAGAATCTCCACCATGCGTTAACAGCAAGAAGCCTGACACAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS GCA 90 bp | ATCTTCTGTGTCAGGCTTCTTGCTGTTAACGCATGGTGGAGATTCTaGGTGAGCCTTCTTCCACAGGAGACCGGTACTTGCAGTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFCVRLLAVNAWWRF*VSLLPQETGTCSHC Trigger: GCAGTGACTGCAAGTACCGGTCTCCTGTGGAAGAAGGCTCACGCAGAATCTCCACCATGCGTTAACAGCAAGAAGCCTGACACAGAAGAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCATGAAGTTTCACCAGGTTCGTaGATTACTTTCAAGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TPRKMGRWAPLPMHQQHEVSPGS*ITFKVA Trigger: TGCCACCTTGAAAGTAATCAACGAACCTGGTGAAAC...TTCATGCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCGGGTGTTCCCAGTGGTaGGACGGTCTCTGTGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRELTKVSTLKPQSCFRTGCSQW*DGLCDA Trigger: TGCGTCACAGAGACCGTCCAACCACTGGGAACACCC...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTACTCCCAGAAAGATGGGGAGGTGGGCACCACTCCCGATGCATCAGCAGCAATTCCAGGAAGTTTTaGATGGTCAGTTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLPERWGGGHHSRCISSNSRKF*MVSFPL Trigger: CAAAGGGAAACTGACCATCAAAAACTTCCTGGAATT...GCTGCTGATGCATCGGGAGTGGTGCCCACCTCCCCATCTTTCTGGGAGTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | ATCATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAGTGAAGCCCATGTCCTaGGGCTTCTCCAGGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IIHHTSFRLPAHFQTCSLVKPMS*GFSRPL Trigger: GAGAGGCCTGGAGAAGCCCAAGGACATGGGCTTCAC...TAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS CCA 90 bp | TCCATCAAAGCGCTTTATTATATACTGATCCAGGCCCAAGTGTTCTaGCTGCTTCTCATTGGGCGTTATGGAGCGCACAAAGTCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SIKALYYILIQAQVF*LLLIGRYGAHKVLR Trigger: CCGCAGGACTTTGTGCGCTCCATAACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTGGATCAGTATATAATAAAGCGCTTTGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000167612.2 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGTTCTTGCTACTATAAATCCACAGCGAGAGACAGATGTCAGAGCAGAGCAGTCCCAGGCAGTTTCTaGGGCACATTTCCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ECSCYYKSTARDRCQSRAVPGSF*GTFPHG Trigger: GCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGAC...TGCTCTGCTCTGACATCTGTCTCTCGCTGTGGATTTATAGTAGCAAGAACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | GCTATAATTAAAGTGATATTTTACGAGTGTCTTAGACAGAGGGCAGCTAGGGGAGGGTGTTCCCAGTGGTaGGACGGTCTCTGTGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: AIIKVIFYECLRQRAARGGCSQW*DGLCDA Trigger: TGCGTCACAGAGACCGTCCAACCACTGGGAACACCC...TCCCCTAGCTGCCCTCTGTCTAAGACACTCGTAAAATATCACTTTAATTATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCAATGGAAACGAACTCCTaGTTGCTCAGCTCCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KVSTLKPQSCFRTFHPTAMETNS*LLSSPL Trigger: CAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCAT...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCGTCCCAGGCAGTTTCTaGGGCACATTTCCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRELTKVSTLKPQSCFRTVPGSF*GTFPHG Trigger: GCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGAC...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS TCA 90 bp | TCGGTCTGCCAGAACTCCTTTCCATCAAAGCGCTTTATTATATACTaGTCCAGGCCCAAGTGTTCTGGCTGCTTCTCATTGGGCGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SVCQNSFPSKRFIIY*SRPKCSGCFSLGVM Trigger: CATAACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTGGATCAGTATATAATAAAGCGCTTTGATGGAAAGGAGTTCTGGCAGACCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020311.13 |
||
| CDS-3UTR CAA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAACACTGTCCTGGCCACTaGCTGCATGGTCACTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: HSSHFLSPASSFPNLQLKHCPGH*LHGHFI Trigger: GATAAAGTGACCATGCAGCAAGTGGCCAGGACAGTG...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAATTGCTCAGCTCCCCATaGCCATCACAGTCAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSHFLSPASSFPNLQLKLLSSP*PSQSKS Trigger: GCTCTTTGACTGTGATGGCAATGGGGAGCTGAGCAA...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS TCA 90 bp | AGTACCTGCCAGAACTCCTTTCCATCAAAGCGCTTTATTATATACTaGTCCAGGCCCAAGTGTTCTGGCTGCTTCTCATTGGGCGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: STCQNSFPSKRFIIY*SRPKCSGCFSLGVM Trigger: CATAACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTGGATCAGTATATAATAAAGCGCTTTGATGGAAAGGAGTTCTGGCAGGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAAACAGCAGGAGGAGTTTCACCAGGTTCGTaGATTACTTTCAAGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFRLPAHFQTCSLKTAGGVSPGS*ITFKVA Trigger: TGCCACCTTGAAAGTAATCAACGAACCTGGTGAAAC...TCCTCCTGCTGTTTTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAATGGAAACGAACTCCTaGTTGCTCAGCTCCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: HSSHFLSPASSFPNLQLKMETNS*LLSSPL Trigger: CAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCAT...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGGAGTTAACTAAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCGTTTCACCAGGTTCGTaGATTACTTTCAAGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGELTKVSTLKPQSCFRTVSPGS*ITFKVA Trigger: TGCCACCTTGAAAGTAATCAACGAACCTGGTGAAAC...GGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTTAGTTAACTCCCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179709.8 |
||
| CDS TCA 90 bp | ATTTTCTGCCAGAACTCCTTTCCATCAAAGCGCTTTATTATATACTaGTCCAGGCCCAAGTGTTCTGGCTGCTTCTCATTGGGCGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: IFCQNSFPSKRFIIY*SRPKCSGCFSLGVM Trigger: CATAACGCCCAATGAGAAGCAGCCAGAACACTTGGGCCTGGATCAGTATATAATAAAGCGCTTTGATGGAAAGGAGTTCTGGCAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092508.12 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAAACAGCAGGAGGAAATTCCAGGAAGTTTTaGATGGTCAGTTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFRLPAHFQTCSLKTAGGNSRKF*MVSFPL Trigger: CAAAGGGAAACTGACCATCAAAAACTTCCTGGAATT...TCCTCCTGCTGTTTTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTCTCTACTTTGAAGCCTCAGTCCTGTTTTAGGACCTTCCATCCGACTGCAAATTCCAGGAAGTTTTaGATGGTCAGTTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KVSTLKPQSCFRTFHPTANSRKF*MVSFPL Trigger: CAAAGGGAAACTGACCATCAAAAACTTCCTGGAATT...TGCAGTCGGATGGAAGGTCCTAAAACAGGACTGAGGCTTCAAAGTAGAGACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAACAGCAGGAGGAAAATGGCAGGGAGTGTTCTTGCTACTATAAATCCAGTTTCACCAGGTTCGTaGATTACTTTCAAGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKNSRRKMAGSVLATINPVSPGS*ITFKVA Trigger: TGCCACCTTGAAAGTAATCAACGAACCTGGTGAAAC...TGGATTTATAGTAGCAAGAACACTCCCTGCCATTTTCCTCCTGCTGTTTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS-3UTR CAA 90 bp | CATTCATCACACTTCCTTTCGCCTGCCAGCTCATTTCCAAACTTGCAGCTTAAAAATTCCAGGAAGTTTTaGATGGTCAGTTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSSHFLSPASSFPNLQLKNSRKF*MVSFPL Trigger: CAAAGGGAAACTGACCATCAAAAACTTCCTGGAATT...TTTAAGCTGCAAGTTTGGAAATGAGCTGGCAGGCGAAAGGAAGTGTGATGAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 |
||
| CDS CAA 72 bp | CACATGGCCTGCATGAGGCGGGTGAAGCCCATGTCCTaGGGCTTCTCCAGGCCTCTCATCAGCCGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HMACMRRVKPMS*GFSRPLISRCF Trigger: GAAGCAGCGGCTGATGAGAGGCCTGGAGAAGCCCAAGGACATGGGCTTCACCCGCCTCATGCAGGCCATGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS GCA 72 bp | CTTCTTGTCCTCAGGATAAGGCTCTGCCGCAGCATCTaGAGCCCTTCCTTCACGGCTGGACACTTCCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLVLRIRLCRSI*SPSFTAGHFPA Trigger: AGCGGGGAAGTGTCCAGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAGCCTTATCCTGAGGACAAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS CCA 72 bp | GCTTCTTCAGCTGTCTCTGCATGGCGGTCAGCTTCTTaGACTGCACTCCACTGTAGGCCAGCAGCATGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASSAVSAWRSAS*TALHCRPAACP Trigger: GGGGCATGCTGCTGGCCTACAGTGGAGTGCAGTCCAAGAAGCTGACCGCCATGCAGAGACAGCTGAAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS CAA 90 bp | GCACATTTCCACATGGCCTGCATGAGGCGGGTGAAGCCCATGTCCTaGGGCTTCTCCAGGCCTCTCATCAGCCGCTGCTTCATGATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: AHFHMACMRRVKPMS*GFSRPLISRCFMME Trigger: TTCCATCATGAAGCAGCGGCTGATGAGAGGCCTGGAGAAGCCCAAGGACATGGGCTTCACCCGCCTCATGCAGGCCATGTGGAAATGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS TCA 72 bp | GACTTGAGGGTGTTCCCAGTGGTTGGACGGTCTCTGTaGCGCATGCCCATGCTGGTCTGGGAGCGAATGATG | + |
|
Preference number: 6 (lower is better) Translates to: DLRVFPVVGRSL*RMPMLVWERMM Trigger: CATCATTCGCTCCCAGACCAGCATGGGCATGCGTCACAGAGACCGTCCAACCACTGGGAACACCCTCAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS GCA 72 bp | TCCCAGGCAGTTTCTTGGGCACATTTCCACATGGCCTaGATGAGGCGGGTGAAGCCCATGTCCTTGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQAVSWAHFHMA*MRRVKPMSLGF Trigger: GAAGCCCAAGGACATGGGCTTCACCCGCCTCATGCAGGCCATGTGGAAATGTGCCCAAGAAACTGCCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS CCA 72 bp | GGAACGCCACCAGCATCAATCTTCGTTTGGTCTGTGTaGGCTGTGATGCCCCATGGTACCAGCGAGAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTPPASIFVWSV*AVMPHGTSESP Trigger: TGGGCTCTCGCTGGTACCATGGGGCATCACAGCCCACACAGACCAAACGAAGATTGATGCTGGTGGCGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS CCA 72 bp | TCACAGTCAAAGAGCGCGAACACCACGTCACACACATaGTCCGAGAGTTCGACCTTCGCCACTGTCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQSKSANTTSHT*SESSTFATVLA Trigger: GGCCAGGACAGTGGCGAAGGTCGAACTCTCGGACCATGTGTGTGACGTGGTGTTCGCGCTCTTTGACTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS TCA 72 bp | CGCATGCCCATGCTGGTCTGGGAGCGAATGATGCTCTaGACCTGCTCAAACTCCTCCATGTCTACCTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RMPMLVWERMML*TCSNSSMSTSP Trigger: CGGAGAGGTAGACATGGAGGAGTTTGAGCAGGTTCAGAGCATCATTCGCTCCCAGACCAGCATGGGCATGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
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| CDS GCA 72 bp | AGAGCGCTTCTTCTTCTTGTCCTCAGGATAAGGCTCTaGCGCAGCATCTGCAGCCCTTCCTTCACGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RALLLLVLRIRL*RSICSPSFTAG Trigger: TCCAGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAGCCTTATCCTGAGGACAAGAAGAAGAAGCGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
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| CDS GCA 72 bp | GCTTCTTGGACTGCACTCCACTGTAGGCCAGCAGCATaGCCCCGAACTGCCTCTCAGAGATTCTCCCATCTA | + |
|
Preference number: 6 (lower is better) Translates to: ASWTALHCRPAA*PRTASQRFSHL Trigger: TAGATGGGAGAATCTCTGAGAGGCAGTTCGGGGGCATGCTGCTGGCCTACAGTGGAGTGCAGTCCAAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS CCA 72 bp | ATGCTCCCAGGAACGCCACCAGCATCAATCTTCGTTTaGTCTGTGTGGGCTGTGATGCCCCATGGTACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MLPGTPPASIFV*SVWAVMPHGTS Trigger: GCTGGTACCATGGGGCATCACAGCCCACACAGACCAAACGAAGATTGATGCTGGTGGCGTTCCTGGGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS CAA 72 bp | GATGCTCCCAGGAACGCCACCAGCATCAATCTTCGTTaGGTCTGTGTGGGCTGTGATGCCCCATGGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: DAPRNATSINLR*VCVGCDAPWYQ Trigger: CTGGTACCATGGGGCATCACAGCCCACACAGACCAAACGAAGATTGATGCTGGTGGCGTTCCTGGGAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS TCA 72 bp | TGGGCTTCTCCAGGCCTCTCATCAGCCGCTGCTTCATaGTGGAAACGAACTCCTTGTTGCTCAGCTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WASPGLSSAAAS*WKRTPCCSAPH Trigger: ATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGGCCTGGAGAAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS GCA 72 bp | TCCGAGAGTTCGACCTTCGCCACTGTCCTGGCCACTTaGTGCATGGTCACTTTATCAAGAGATGCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SESSTFATVLAT*CMVTLSRDAPA Trigger: GGCTGGAGCATCTCTTGATAAAGTGACCATGCAGCAAGTGGCCAGGACAGTGGCGAAGGTCGAACTCTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS CCA 72 bp | GCTCTGCCGCAGCATCTGCAGCCCTTCCTTCACGGCTaGACACTTCCCCGCTGTCTTTGTTTCTCTCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ALPQHLQPFLHG*TLPRCLCFSLY Trigger: ATAAAGAGAGAAACAAAGACAGCGGGGAAGTGTCCAGCCGTGAAGGAAGGGCTGCAGATGCTGCGGCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
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| CDS CAA 72 bp | GTCCGAGAGTTCGACCTTCGCCACTGTCCTGGCCACTaGCTGCATGGTCACTTTATCAAGAGATGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VREFDLRHCPGH*LHGHFIKRCSS Trigger: GCTGGAGCATCTCTTGATAAAGTGACCATGCAGCAAGTGGCCAGGACAGTGGCGAAGGTCGAACTCTCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS CAA 90 bp | TCCAGGCCTCTCATCAGCCGCTGCTTCATGATGGAAACGAACTCCTaGTTGCTCAGCTCCCCATTGCCATCACAGTCAAAGAGCGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRPLISRCFMMETNS*LLSSPLPSQSKSAN Trigger: GTTCGCGCTCTTTGACTGTGATGGCAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGGCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS TCA 72 bp | GGCTTCTTGCTGTTAACGCATGGTGGAGATTCTGCGTaGGCCTTCTTCCACAGGAGACCGGTACTTGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GFLLLTHGGDSA*AFFHRRPVLAV Trigger: GACTGCAAGTACCGGTCTCCTGTGGAAGAAGGCTCACGCAGAATCTCCACCATGCGTTAACAGCAAGAAGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
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| CDS TCA 72 bp | CTCTGTGACGCATGCCCATGCTGGTCTGGGAGCGAATaGTGCTCTGAACCTGCTCAAACTCCTCCATGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LCDACPCWSGSE*CSEPAQTPPCL Trigger: TAGACATGGAGGAGTTTGAGCAGGTTCAGAGCATCATTCGCTCCCAGACCAGCATGGGCATGCGTCACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS GCA 72 bp | CCCTTCCCATCTTTGAAGTGCTTCTTCAGCTGTCTCTaGATGGCGGTCAGCTTCTTGGACTGCACTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PFPSLKCFFSCL*MAVSFLDCTPL Trigger: CAGTGGAGTGCAGTCCAAGAAGCTGACCGCCATGCAGAGACAGCTGAAGAAGCACTTCAAAGATGGGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
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| CDS GCA 72 bp | ATGTCCTTGGGCTTCTCCAGGCCTCTCATCAGCCGCTaGTTCATGATGGAAACGAACTCCTTGTTGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MSLGFSRPLISR*FMMETNSLLLS Trigger: GCTGAGCAACAAGGAGTTCGTTTCCATCATGAAGCAGCGGCTGATGAGAGGCCTGGAGAAGCCCAAGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS TCA 72 bp | TCTCTACCTCCTGGAAAGTCAGGCCCTTCCCATCTTTaGAGTGCTTCTTCAGCTGTCTCTGCATGGCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLPPGKSGPSHL*SASSAVSAWRS Trigger: TGACCGCCATGCAGAGACAGCTGAAGAAGCACTTCAAAGATGGGAAGGGCCTGACTTTCCAGGAGGTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS CCA 72 bp | ACACATGGTCCGAGAGTTCGACCTTCGCCACTGTCCTaGCCACTTGCTGCATGGTCACTTTATCAAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: THGPRVRPSPLS*PLAAWSLYQEM Trigger: CATCTCTTGATAAAGTGACCATGCAGCAAGTGGCCAGGACAGTGGCGAAGGTCGAACTCTCGGACCATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS CAA 90 bp | GCATCTGCAGCCCTTCCTTCACGGCTGGACACTTCCCCGCTGTCTTaGTTTCTCTCTTTATCTTCTGTGTCAGGCTTCTTGCTGTTAACG | + |
|
Preference number: 6 (lower is better) Translates to: ASAALPSRLDTSPLS*FLSLSSVSGFLLLT Trigger: CGTTAACAGCAAGAAGCCTGACACAGAAGATAAAGAGAGAAACAAAGACAGCGGGGAAGTGTCCAGCCGTGAAGGAAGGGCTGCAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
||
| CDS CAA 72 bp | ATCAGCCGCTGCTTCATGATGGAAACGAACTCCTTGTaGCTCAGCTCCCCATTGCCATCACAGTCAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISRCFMMETNSL*LSSPLPSQSKS Trigger: GCTCTTTGACTGTGATGGCAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCATCATGAAGCAGCGGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS CAA 72 bp | CTCATCAGCCGCTGCTTCATGATGGAAACGAACTCCTaGTTGCTCAGCTCCCCATTGCCATCACAGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LISRCFMMETNS*LLSSPLPSQSK Trigger: CTTTGACTGTGATGGCAATGGGGAGCTGAGCAACAAGGAGTTCGTTTCCATCATGAAGCAGCGGCTGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000179709.8 |
||
| CDS TCA 72 bp | CCAGCCTCGGAAGCATTAACATGGATTCCAGAGCAGTaGTTAATCGAAAGCACATGCTGCCGAGTCAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: PASEALTWIPEQ*LIESTCCRVST Trigger: GGTACTGACTCGGCAGCATGTGCTTTCGATTAATCACTGCTCTGGAATCCATGTTAATGCTTCCGAGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167612.2 |
||
| CDS CAA 72 bp | TGCGGAGTCATGAACACTTCGGTTTCACCAGGTTCGTaGATTACTTTCAAGGTGGCAAAATATCGGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: CGVMNTSVSPGS*ITFKVAKYRKI Trigger: AATTTTCCGATATTTTGCCACCTTGAAAGTAATCAACGAACCTGGTGAAACCGAAGTGTTCATGACTCCGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020311.13 ENSMUST00000092508.12 ENSMUST00000165563.8 ENSMUST00000171409.8 ENSMUST00000179709.8 |
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