Pregenerated sensors for MGST3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026688Ensembl transcript IDs: ENSMUST00000028005.3
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGACTTCATCACCGATTCACAGACTGTGTCGCGGGGGTGGGGGTaGGGTGCGCTCACAGCTTTGCTCGTAATGGGTAGAAATGGCACC | + |
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Preference number: 1 (lower is better) Translates to: HDFITDSQTVSRGWG*GALTALLVMGRNGT Trigger: GGTGCCATTTCTACCCATTACGAGCAAAGCTGTGAGCGCACCCCACCCCCACCCCCGCGACACAGTCTGTGAATCGGTGATGAAGTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| 3UTR CCA 90 bp | ACGCGTAGAGGTCAGGGGCTAACTTGTGGGAGCCAGATCAACACATaGCCATCAGGCTTTGTGACAAGCGTCGTTACCTGCTCATGTGAC | + |
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Preference number: 1 (lower is better) Translates to: TRRGQGLTCGSQINT*PSGFVTSVVTCSCD Trigger: GTCACATGAGCAGGTAACGACGCTTGTCACAAAGCCTGATGGCCATGTGTTGATCTGGCTCCCACAAGTTAGCCCCTGACCTCTACGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| 3UTR-3UTR TCA 90 bp | GCCGAGGATGAATTTTTCCGTCCTCATCACCATGACTTCATCACCGATTCACAGGTCGCTGGAGGTGAGTaGGAGTCGGAAGGCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AEDEFFRPHHHDFITDSQVAGGE*ESEGPP Trigger: TGGAGGGCCTTCCGACTCTCACTCACCTCCAGCGAC...CTGTGAATCGGTGATGAAGTCATGGTGATGAGGACGGAAAAATTCATCCTCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| 3UTR-3UTR TCA 90 bp | ACGTTTATTTGTATAGGTGTTACATACGTGTGCGACATACAGTGCACGCGTAGAGTGAGTCGCTGGAGGTaGGTGAGAGTCGGAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: TFICIGVTYVCDIQCTRRVSRWR*VRVGRP Trigger: GGGCCTTCCGACTCTCACTCACCTCCAGCGACTCAC...TCTACGCGTGCACTGTATGTCGCACACGTATGTAACACCTATACAAATAAACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| 3UTR CCA 72 bp | ATCACCGATTCACAGACTGTGTCGCGGGGGTGGGGGTaGGGTGCGCTCACAGCTTTGCTCGTAATGGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: ITDSQTVSRGWG*GALTALLVMGR Trigger: TCTACCCATTACGAGCAAAGCTGTGAGCGCACCCCACCCCCACCCCCGCGACACAGTCTGTGAATCGGTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| 3UTR CCA 72 bp | GGTCAGGGGCTAACTTGTGGGAGCCAGATCAACACATaGCCATCAGGCTTTGTGACAAGCGTCGTTACCTGC | + |
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Preference number: 3 (lower is better) Translates to: GQGLTCGSQINT*PSGFVTSVVTC Trigger: GCAGGTAACGACGCTTGTCACAAAGCCTGATGGCCATGTGTTGATCTGGCTCCCACAAGTTAGCCCCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| 3UTR TCA 72 bp | GTGGGAGCCAGATCAACACATGGCCATCAGGCTTTGTaGCAAGCGTCGTTACCTGCTCATGTGACTGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: VGARSTHGHQAL*QASLPAHVTEL Trigger: GAGCTCAGTCACATGAGCAGGTAACGACGCTTGTCACAAAGCCTGATGGCCATGTGTTGATCTGGCTCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| 3UTR GCA 72 bp | CAGTTAACGTTTATTTGTATAGGTGTTACATACGTGTaGGACATACAGTGCACGCGTAGAGGTCAGGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: QLTFICIGVTYV*DIQCTRRGQGL Trigger: TAGCCCCTGACCTCTACGCGTGCACTGTATGTCGCACACGTATGTAACACCTATACAAATAAACGTTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR CCA 90 bp | ATCACCATGACTTCATCACCGATTCACAGACTGTGTCGCGGGGGTGGGGGTGGGATCCAGCCGAGATGCTaGAAAGCAGAGCACACGGTG | + |
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Preference number: 4 (lower is better) Translates to: ITMTSSPIHRLCRGGGGGIQPRC*KAEHTV Trigger: CACCGTGTGCTCTGCTTTCCAGCATCTCGGCTGGAT...CCCACCCCCACCCCCGCGACACAGTCTGTGAATCGGTGATGAAGTCATGGTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR TCA 90 bp | ATCACCATGACTTCATCACCGATTCACAGACTGTGTCGCGGGGGTGGGGGTGGGCGCGCTGAATGCAGTTaGACATATGCCCGTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ITMTSSPIHRLCRGGGGGRAECS*TYARSQ Trigger: CTGAGAACGGGCATATGTTCAACTGCATTCAGCGCG...CCCACCCCCACCCCCGCGACACAGTCTGTGAATCGGTGATGAAGTCATGGTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR GCA 90 bp | TGGGGGTGGGGTGCGCTCACAGCTTTGCTCGTAATGGGTAGAAATGGCACCATTCCAGGCCAGAAGCTATaGGCGGGTGGTAAACACCTC | + |
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Preference number: 4 (lower is better) Translates to: WGWGALTALLVMGRNGTIPGQKL*AGGKHL Trigger: GAGGTGTTTACCACCCGCGCATAGCTTCTGGCCTGG...AATGGTGCCATTTCTACCCATTACGAGCAAAGCTGTGAGCGCACCCCACCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR GCA 90 bp | TCCGTCCTCATCACCATGACTTCATCACCGATTCACAGACTGTGTCGCGGGGGTCTGATCCAGCCGAGATaGTGGAAAGCAGAGCACACG | + |
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Preference number: 4 (lower is better) Translates to: SVLITMTSSPIHRLCRGGLIQPR*WKAEHT Trigger: CGTGTGCTCTGCTTTCCAGCATCTCGGCTGGATCAG...ACCCCCGCGACACAGTCTGTGAATCGGTGATGAAGTCATGGTGATGAGGACGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR CCA 90 bp | AACTTGTGGGAGCCAGATCAACACATGGCCATCAGGCTTTGTGACAAGCGTCGTAAGCAGAGCACACGGTaGTGCCCATCAGGGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: NLWEPDQHMAIRLCDKRRKQSTR*CPSGQR Trigger: TCTTTGCCCTGATGGGCACCACCGTGTGCTCTGCTT...ACGACGCTTGTCACAAAGCCTGATGGCCATGTGTTGATCTGGCTCCCACAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR TCA 90 bp | GCCGAGGATGAATTTTTCCGTCCTCATCACCATGACTTCATCACCGATTCACAGAGCCTAAGCCTGGTCTaGTCCAGCCGAGATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AEDEFFRPHHHDFITDSQSLSLV*SSRDAG Trigger: TCCAGCATCTCGGCTGGATCAGACCAGGCTTAGGCT...CTGTGAATCGGTGATGAAGTCATGGTGATGAGGACGGAAAAATTCATCCTCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR TCA 90 bp | GCCGAGGATGAATTTTTCCGTCCTCATCACCATGACTTCATCACCGATTCACAGAGCTGGCAGCACCAGTaGGAAGCACAAATCCATACT | + |
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Preference number: 4 (lower is better) Translates to: AEDEFFRPHHHDFITDSQSWQHQ*EAQIHT Trigger: AGTATGGATTTGTGCTTCTCACTGGTGCTGCCAGCT...CTGTGAATCGGTGATGAAGTCATGGTGATGAGGACGGAAAAATTCATCCTCGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR GCA 90 bp | TTAACGTTTATTTGTATAGGTGTTACATACGTGTGCGACATACAGTGCACGCGTCAGAGCACACGGTGGTaGCCATCAGGGCAAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTFICIGVTYVCDIQCTRQSTRW*PSGQRG Trigger: CCCTCTTTGCCCTGATGGGCACCACCGTGTGCTCTG...ACGCGTGCACTGTATGTCGCACACGTATGTAACACCTATACAAATAAACGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR GCA 90 bp | AGACTCTCAGAAAGAGATGCAGGCAGGAGCTTTAGGTATGAGGCTGATGCCAGATGTGTAGTAGCCATATaGGTAAAGGACTCGCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: RLSERDAGRSFRYEADARCVVAI*VKDSPN Trigger: ATTGGGCGAGTCCTTTACGCATATGGCTACTACACA...TCTGGCATCAGCCTCATACCTAAAGCTCCTGCCTGCATCTCTTTCTGAGAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR TCA 90 bp | TTAACGTTTATTTGTATAGGTGTTACATACGTGTGCGACATACAGTGCACGCGTTTCTGGTGGGCGCGCTaGATGCAGTTGAACATATGC | + |
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Preference number: 4 (lower is better) Translates to: LTFICIGVTYVCDIQCTRFWWAR*MQLNIC Trigger: GCATATGTTCAACTGCATTCAGCGCGCCCACCAGAA...ACGCGTGCACTGTATGTCGCACACGTATGTAACACCTATACAAATAAACGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR CCA 90 bp | GTTAACGTTTATTTGTATAGGTGTTACATACGTGTGCGACATACAGTGCACGCGACGTTGATGGCTAGGTaGAGCACCATCACAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VNVYLYRCYIRVRHTVHATLMAR*STITKL Trigger: CAGCTTTGTGATGGTGCTCCACCTAGCCATCAACGT...CGCGTGCACTGTATGTCGCACACGTATGTAACACCTATACAAATAAACGTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR GCA 90 bp | ACGTTTATTTGTATAGGTGTTACATACGTGTGCGACATACAGTGCACGCGTAGAATGCAGTTGAACATATaGCCGTTCTCAGGATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TFICIGVTYVCDIQCTRRMQLNI*PFSGSV Trigger: CACAGATCCTGAGAACGGGCATATGTTCAACTGCAT...TCTACGCGTGCACTGTATGTCGCACACGTATGTAACACCTATACAAATAAACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS CCA 90 bp | TCTACCTTGTACTTCTTGCGGGCTTTGCCCACGTTGATGGCTAGGTaGAGCACCATCACAAAGCTGGCAGCACCAGTGAGAAGCACAAAT | + |
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Preference number: 5 (lower is better) Translates to: STLYFLRALPTLMAR*STITKLAAPVRSTN Trigger: ATTTGTGCTTCTCACTGGTGCTGCCAGCTTTGTGATGGTGCTCCACCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTACAAGGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR CAA 90 bp | AGACTCTCAGAAAGAGATGCAGGCAGGAGCTTTAGGTATGAGGCTGATGCCAGATACTTCTTGCGGGCTTaGCCCACGTTGATGGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: RLSERDAGRSFRYEADARYFLRA*PTLMAR Trigger: CCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTA...TCTGGCATCAGCCTCATACCTAAAGCTCCTGCCTGCATCTCTTTCTGAGAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS-3UTR CAA 90 bp | TTAACGTTTATTTGTATAGGTGTTACATACGTGTGCGACATACAGTGCACGCGTACAGGGTACTCTACCTaGTACTTCTTGCGGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LTFICIGVTYVCDIQCTRTGYST*YFLRAL Trigger: CAAAGCCCGCAAGAAGTACAAGGTAGAGTACCCTGT...ACGCGTGCACTGTATGTCGCACACGTATGTAACACCTATACAAATAAACGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS GCA 72 bp | TCCAGCCGAGATGCTGGAAAGCAGAGCACACGGTGGTaGCCATCAGGGCAAAGAGGGCAAGAGAGCCCACGG | + |
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Preference number: 6 (lower is better) Translates to: SSRDAGKQSTRW*PSGQRGQESPR Trigger: CCGTGGGCTCTCTTGCCCTCTTTGCCCTGATGGGCACCACCGTGTGCTCTGCTTTCCAGCATCTCGGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS TCA 72 bp | GGTGGCAGGATCTGGACCCGTAGCCTAAGCCTGGTCTaGTCCAGCCGAGATGCTGGAAAGCAGAGCACACGG | + |
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Preference number: 6 (lower is better) Translates to: GGRIWTRSLSLV*SSRDAGKQSTR Trigger: CCGTGTGCTCTGCTTTCCAGCATCTCGGCTGGATCAGACCAGGCTTAGGCTACGGGTCCAGATCCTGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS TCA 72 bp | GGAGGGTACACCTCCAACGTGTTCTGGTGGGCGCGCTaGATGCAGTTGAACATATGCCCGTTCTCAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: GGYTSNVFWWAR*MQLNICPFSGS Trigger: AGATCCTGAGAACGGGCATATGTTCAACTGCATTCAGCGCGCCCACCAGAACACGTTGGAGGTGTACCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS CAA 90 bp | ATGACAGGGTACTCTACCTTGTACTTCTTGCGGGCTTTGCCCACGTaGATGGCTAGGTGGAGCACCATCACAAAGCTGGCAGCACCAGTG | + |
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Preference number: 6 (lower is better) Translates to: MTGYSTLYFLRALPT*MARWSTITKLAAPV Trigger: CACTGGTGCTGCCAGCTTTGTGATGGTGCTCCACCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTACAAGGTAGAGTACCCTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS TCA 72 bp | ACTCTACCTTGTACTTCTTGCGGGCTTTGCCCACGTTaGTGGCTAGGTGGAGCACCATCACAAAGCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TLPCTSCGLCPR*WLGGAPSQSWQ Trigger: CTGCCAGCTTTGTGATGGTGCTCCACCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTACAAGGTAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS TCA 72 bp | CCTCCAACGTGTTCTGGTGGGCGCGCTGAATGCAGTTaGACATATGCCCGTTCTCAGGATCTGTGCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: PPTCSGGRAECS*TYARSQDLCCT Trigger: TGTACAGCACAGATCCTGAGAACGGGCATATGTTCAACTGCATTCAGCGCGCCCACCAGAACACGTTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS CAA 72 bp | GTGCTGTACATGACAGGGTACTCTACCTTGTACTTCTaGCGGGCTTTGCCCACGTTGATGGCTAGGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VLYMTGYSTLYF*RALPTLMARWS Trigger: GCTCCACCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTACAAGGTAGAGTACCCTGTCATGTACAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS CAA 90 bp | GTGCTGTACATGACAGGGTACTCTACCTTGTACTTCTTGCGGGCTTaGCCCACGTTGATGGCTAGGTGGAGCACCATCACAAAGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VLYMTGYSTLYFLRA*PTLMARWSTITKLA Trigger: TGCCAGCTTTGTGATGGTGCTCCACCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTACAAGGTAGAGTACCCTGTCATGTACAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS CAA 72 bp | TACTCTACCTTGTACTTCTTGCGGGCTTTGCCCACGTaGATGGCTAGGTGGAGCACCATCACAAAGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: YSTLYFLRALPT*MARWSTITKLA Trigger: TGCCAGCTTTGTGATGGTGCTCCACCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTACAAGGTAGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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| CDS CAA 72 bp | ATGACAGGGTACTCTACCTTGTACTTCTTGCGGGCTTaGCCCACGTTGATGGCTAGGTGGAGCACCATCACA | + |
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Preference number: 6 (lower is better) Translates to: MTGYSTLYFLRA*PTLMARWSTIT Trigger: TGTGATGGTGCTCCACCTAGCCATCAACGTGGGCAAAGCCCGCAAGAAGTACAAGGTAGAGTACCCTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028005.3 |
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