Pregenerated sensors for MGST2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074604Ensembl transcript IDs: ENSMUST00000099106.10, ENSMUST00000159554.7, ENSMUST00000161590.4
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCTTGGCAACATGAAAGTCCAGGTATTCGTTCAGGAATCTGCTTaGTACCCCCAGGACAGCGAGGACAGGCAGCAAGGTCAAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: FLGNMKVQVFVQESA*YPQDSEDRQQGQNP Trigger: GGGATTTTGACCTTGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGAATACCTGGACTTTCATGTTGCCAAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| 3UTR GCA 90 bp | TCAGTTTCTTGGCAACATGAAAGTCCAGGTATTCGTTCAGGAATCTaGTTGCTACCCCCAGGACAGCGAGGACAGGCAGCAAGGTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: SVSWQHESPGIRSGI*LLPPGQRGQAARSK Trigger: TTTTGACCTTGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGAATACCTGGACTTTCATGTTGCCAAGAAACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| 3UTR CAA 90 bp | GTTTCTTGGCAACATGAAAGTCCAGGTATTCGTTCAGGAATCTGCTaGCTACCCCCAGGACAGCGAGGACAGGCAGCAAGGTCAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: VSWQHESPGIRSGIC*LPPGQRGQAARSKS Trigger: GGATTTTGACCTTGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGAATACCTGGACTTTCATGTTGCCAAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| 3UTR GCA 72 bp | TGGCAACATGAAAGTCCAGGTATTCGTTCAGGAATCTaGTTGCTACCCCCAGGACAGCGAGGACAGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: WQHESPGIRSGI*LLPPGQRGQAA Trigger: TGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGAATACCTGGACTTTCATGTTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| 3UTR GCA 72 bp | AACATGAAAGTCCAGGTATTCGTTCAGGAATCTGCTTaGTACCCCCAGGACAGCGAGGACAGGCAGCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: NMKVQVFVQESA*YPQDSEDRQQG Trigger: ACCTTGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGAATACCTGGACTTTCATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| 3UTR CCA 72 bp | GGAAGAGAAAAACTTAGAAGGGCTTCCTCAGTTTCTTaGCAACATGAAAGTCCAGGTATTCGTTCAGGAATC | + |
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Preference number: 3 (lower is better) Translates to: GREKLRRASSVS*QHESPGIRSGI Trigger: GATTCCTGAACGAATACCTGGACTTTCATGTTGCCAAGAAACTGAGGAAGCCCTTCTAAGTTTTTCTCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| CDS-3UTR TCA 90 bp | TCGTTCAGGAATCTGCTTGCTACCCCCAGGACAGCGAGGACAGGCAGCAAGGTCATTCCAGAGGGCCCGTaGCTGCTGGGGGTGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: SFRNLLATPRTARTGSKVIPEGP*LLGVQS Trigger: AGATTGCACCCCCAGCAGTCACGGGCCCTCTGGAAT...GACCTTGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| CDS-3UTR TCA 90 bp | AGCGAGGACAGGCAGCAAGGTCAAAATCCCCAGGCTCAGTCGGAAACCGGTGATATTCCAGAGGGCCCGTaGCTGCTGGGGGTGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: SEDRQQGQNPQAQSETGDIPEGP*LLGVQS Trigger: AGATTGCACCCCCAGCAGTCACGGGCCCTCTGGAAT...ATCACCGGTTTCCGACTGAGCCTGGGGATTTTGACCTTGCTGCCTGTCCTCGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161590.4 |
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| CDS-3UTR TCA 90 bp | TTCGTTCAGGAATCTGCTTGCTACCCCCAGGACAGCGAGGACAGGCAGCAAGGTGAAACCGGTGATCCTTaGTTGAAGTACCACCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FVQESACYPQDSEDRQQGETGDP*LKYHPA Trigger: GGCTGGGTGGTACTTCAATCAAGGATCACCGGTTTC...ACCTTGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159554.7 |
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| 3UTR CAA 72 bp | CAACATGAAAGTCCAGGTATTCGTTCAGGAATCTGCTaGCTACCCCCAGGACAGCGAGGACAGGCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QHESPGIRSGIC*LPPGQRGQAAR Trigger: CCTTGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGAATACCTGGACTTTCATGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| CDS-3UTR TCA 90 bp | ATGACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGGAAATTCCAGAGGGCCCGTaGCTGCTGGGGGTGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: MTSYCFQSSDGLYKHEREIPEGP*LLGVQS Trigger: AGATTGCACCCCCAGCAGTCACGGGCCCTCTGGAAT...TTCCCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099106.10 ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| CDS-3UTR GCA 90 bp | ATGACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGGAAGTTCAGGAATCTGCTTaGTACCCCCAGGACAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: MTSYCFQSSDGLYKHEREVQESA*YPQDSE Trigger: CTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAAC...TTCCCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS-3UTR GCA 90 bp | CACATGACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGATTCGTTCAGGAATCTaGTTGCTACCCCCAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: HMTSYCFQSSDGLYKHERIRSGI*LLPPGQ Trigger: CTGTCCTGGGGGTAGCAAGCAGATTCCTGAACGAAT...CCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGTCATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS-3UTR TCA 90 bp | ATGACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGGAACAGGCTGCAAAAACTTaGTTGAAGTACCACCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: MTSYCFQSSDGLYKHEREQAAKT*LKYHPA Trigger: GGCTGGGTGGTACTTCAATCAAGTTTTTGCAGCCTG...TTCCCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS-3UTR GCA 90 bp | GAAGAGAAAAACTTAGAAGGGCTTCCTCAGTTTCTTGGCAACATGAAAGTCCAGGAGACCCAGACAGGCTaGAAAAATGTGCACGAAATA | + |
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Preference number: 4 (lower is better) Translates to: EEKNLEGLPQFLGNMKVQETQTG*KNVHEI Trigger: TATTTCGTGCACATTTTTGCAGCCTGTCTGGGTCTC...CTGGACTTTCATGTTGCCAAGAAACTGAGGAAGCCCTTCTAAGTTTTTCTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161590.4 |
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| CDS-3UTR CCA 90 bp | CATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGGAAGAGAGCTTCCTCAGTTTCTTaGCAACATGAAAGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HLIVFRVVTASTSMKGKRASSVS*QHESPG Trigger: ACCTGGACTTTCATGTTGCCAAGAAACTGAGGAAGC...TCTCTTCCCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS-3UTR TCA 90 bp | CACATGACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGAGTTTCTTGGCAACATaGAAGTCCAGGTATTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: HMTSYCFQSSDGLYKHERSFLAT*KSRYSF Trigger: GAACGAATACCTGGACTTTCATGTTGCCAAGAAACT...CCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGTCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS-3UTR GCA 90 bp | CATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGGAAGAGAGAGACCCAGACAGGCTaGAAAAACTTGATTGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: HLIVFRVVTASTSMKGKRETQTG*KNLIEV Trigger: TACTTCAATCAAGTTTTTGCAGCCTGTCTGGGTCTC...TCTCTTCCCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS-3UTR GCA 90 bp | ACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGGAAGAGCAGGCTGCAAAAATGTaGACGAAATATTCTCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: TSYCFQSSDGLYKHEREEQAAKM*TKYSLE Trigger: TTCGAGAGAATATTTCGTGCACATTTTTGCAGCCTG...CTCTTCCCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161590.4 |
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| CDS-3UTR CAA 90 bp | GTTCAGGAATCTGCTTGCTACCCCCAGGACAGCGAGGACAGGCAGCAAGGTCAAAAACTCCAAAGAGTTTaGCTGTGCACGAAATATTCT | + |
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Preference number: 5 (lower is better) Translates to: VQESACYPQDSEDRQQGQKLQRV*LCTKYS Trigger: AGAATATTTCGTGCACAGCAAAACTCTTTGGAGTTT...TTGACCTTGCTGCCTGTCCTCGCTGTCCTGGGGGTAGCAAGCAGATTCCTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159554.7 |
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| CDS-3UTR CAA 90 bp | ACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGGAAGAGTCTTGTGTTTTAGTCTaGCTCGTCCGACCCGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: TSYCFQSSDGLYKHEREESCVLV*LVRPAK Trigger: CTTGGCGGGTCGGACGAGCAAGACTAAAACACAAGA...CTCTTCCCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099106.10 ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| CDS-3UTR CAA 90 bp | CATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGGAAGAGATCTTGTGTTTTAGTCTaGCTCGTCCGACCCGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: HLIVFRVVTASTSMKGKRSCVLV*LVRPAK Trigger: CTTGGCGGGTCGGACGAGCAAGACTAAAACACAAGA...TCTCTTCCCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099106.10 ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| CDS-3UTR CAA 90 bp | GAGAAAAACTTAGAAGGGCTTCCTCAGTTTCTTGGCAACATGAAAGTCCAGGTATCTTGTGTTTTAGTCTaGCTCGTCCGACCCGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: EKNLEGLPQFLGNMKVQVSCVLV*LVRPAK Trigger: CTTGGCGGGTCGGACGAGCAAGACTAAAACACAAGA...TACCTGGACTTTCATGTTGCCAAGAAACTGAGGAAGCCCTTCTAAGTTTTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| CDS GCA 90 bp | CAGCATTACGATGAATACAGGATAAAACTCCAAAGAGTTTTGCTGTaGACGAAATATTCTCTCGAATTCCAGAGGGCCCGTGACTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QHYDEYRIKLQRVLL*TKYSLEFQRARDCW Trigger: CCAGCAGTCACGGGCCCTCTGGAATTCGAGAGAATATTTCGTGCACAGCAAAACTCTTTGGAGTTTTATCCTGTATTCATCGTAATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099106.10 ENSMUST00000159554.7 |
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| CDS-3UTR CAA 90 bp | CACATGACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGACAGGCTGCAAAAACTaGATTGAAGTACCACCCAGC | + |
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Preference number: 5 (lower is better) Translates to: HMTSYCFQSSDGLYKHERTGCKN*IEVPPS Trigger: GCTGGGTGGTACTTCAATCAAGTTTTTGCAGCCTGT...CCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGTCATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS-3UTR CAA 90 bp | CACATGACATCTTATTGTTTTCAGAGTAGTGACGGCCTCTACAAGCATGAAAGGAAACTCCAAAGAGTTTaGCTGTGCACGAAATATTCT | + |
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Preference number: 5 (lower is better) Translates to: HMTSYCFQSSDGLYKHERKLQRV*LCTKYS Trigger: AGAATATTTCGTGCACAGCAAAACTCTTTGGAGTTT...CCTTTCATGCTTGTAGAGGCCGTCACTACTCTGAAAACAATAAGATGTCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099106.10 ENSMUST00000159554.7 |
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| CDS CAA 72 bp | AATTCCAGAGGGCCCGTGACTGCTGGGGGTGCAATCTaGTGTTTTAGTCTTGCTCGTCCGACCCGCCAAGCG | + |
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Preference number: 6 (lower is better) Translates to: NSRGPVTAGGAI*CFSLARPTRQA Trigger: CGCTTGGCGGGTCGGACGAGCAAGACTAAAACACAAGATTGCACCCCCAGCAGTCACGGGCCCTCTGGAATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099106.10 ENSMUST00000159554.7 ENSMUST00000161590.4 |
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| CDS CAA 90 bp | GTGACGGGCGTATATGTACAGGAGACCCAGACAGGCTGCAAAAACTaGATTGAAGTACCACCCAGCCATCCACAGCATTACGATGAATAC | + |
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Preference number: 6 (lower is better) Translates to: VTGVYVQETQTGCKN*IEVPPSHPQHYDEY Trigger: GTATTCATCGTAATGCTGTGGATGGCTGGGTGGTACTTCAATCAAGTTTTTGCAGCCTGTCTGGGTCTCCTGTACATATACGCCCGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS GCA 72 bp | TATATGTACAGGAGACCCAGACAGGCTGCAAAAATGTaGACGAAATATTCTCTCGAATTCCAGAGGGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: YMYRRPRQAAKM*TKYSLEFQRAR Trigger: ACGGGCCCTCTGGAATTCGAGAGAATATTTCGTGCACATTTTTGCAGCCTGTCTGGGTCTCCTGTACATATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161590.4 |
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| CDS CAA 72 bp | GTATATGTACAGGAGACCCAGACAGGCTGCAAAAACTaGATTGAAGTACCACCCAGCCATCCACAGCATTAC | + |
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Preference number: 6 (lower is better) Translates to: VYVQETQTGCKN*IEVPPSHPQHY Trigger: GTAATGCTGTGGATGGCTGGGTGGTACTTCAATCAAGTTTTTGCAGCCTGTCTGGGTCTCCTGTACATATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099106.10 |
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| CDS GCA 72 bp | GATGAATACAGGATAAAACTCCAAAGAGTTTTGCTGTaGACGAAATATTCTCTCGAATTCCAGAGGGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: DEYRIKLQRVLL*TKYSLEFQRAR Trigger: ACGGGCCCTCTGGAATTCGAGAGAATATTTCGTGCACAGCAAAACTCTTTGGAGTTTTATCCTGTATTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099106.10 ENSMUST00000159554.7 |
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