Pregenerated sensors for MGST1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008540Ensembl transcript IDs: ENSMUST00000008684.11, ENSMUST00000118091.8, ENSMUST00000120230.8, ENSMUST00000120302.8, ENSMUST00000120939.8, ENSMUST00000125810.2, ENSMUST00000140932.2, ENSMUST00000204628.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCACCTACAAAGATTCTGAAGTGCATGAGGGCTGTAGAGAGATCTaGTCCACTCAGGGAGTACAGGAGGCCGATGCCGAGAAAGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: STYKDSEVHEGCREI*STQGVQEADAEKGN Trigger: GTTCCCTTTCTCGGCATCGGCCTCCTGTACTCCCTGAGTGGACCAGATCTCTCTACAGCCCTCATGCACTTCAGAATCTTTGTAGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120939.8 ENSMUST00000204628.3 |
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| 3UTR-3UTR CCA 90 bp | CCGAGCACCTACAAAGATTCTGAAGTGCATGAGGGCTGTAGAGAGATCTGGTCCTCAAGATCATTCAGGTaGGCTCTTCAAGGACAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PSTYKDSEVHEGCREIWSSRSFR*ALQGQL Trigger: AAGCTGTCCTTGAAGAGCCCACCTGAATGATCTTGA...GGACCAGATCTCTCTACAGCCCTCATGCACTTCAGAATCTTTGTAGGTGCTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
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| CDS-3UTR GCA 90 bp | TCTGAAGTGCATGAGGGCTGTAGAGAGATCTGGTCCACTCAGGGAGTACAGGAGGGTTATCCTCTGGAATaGGGTCGCAGAGCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: SEVHEGCREIWSTQGVQEGYPLE*GRRAHE Trigger: TTCATGAGCTCTGCGACCGCATTCCAGAGGATAACC...CTCCTGTACTCCCTGAGTGGACCAGATCTCTCTACAGCCCTCATGCACTTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120939.8 ENSMUST00000204628.3 |
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| CDS-3UTR CCA 90 bp | TTGGCTGAGGAAGGGGAGTCAAGTAAGCAATGGTGTGGTAGATCCGAGCACCTATTGTTGGTTATCCTCTaGAATGCGGTCGCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LAEEGESSKQWCGRSEHLLLVIL*NAVAEL Trigger: GAGCTCTGCGACCGCATTCCAGAGGATAACCAACAA...TAGGTGCTCGGATCTACCACACCATTGCTTACTTGACTCCCCTTCCTCAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120939.8 ENSMUST00000204628.3 |
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| CDS-3UTR CCA 90 bp | AGCAATGGTGTGGTAGATCCGAGCACCTACAAAGATTCTGAAGTGCATGAGGGCTTGTTGGTTATCCTCTaGAATGCGGTCGCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SNGVVDPSTYKDSEVHEGLLVIL*NAVAEL Trigger: GAGCTCTGCGACCGCATTCCAGAGGATAACCAACAA...GCCCTCATGCACTTCAGAATCTTTGTAGGTGCTCGGATCTACCACACCATTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120939.8 ENSMUST00000204628.3 |
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| CDS-3UTR CCA 90 bp | TCTGAAGTGCATGAGGGCTGTAGAGAGATCTGGTCCACTCAGGGAGTACAGGAGTGCGAACAAACTTCTTaGCATTCTCTCCCTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SEVHEGCREIWSTQGVQECEQTS*HSLPCQ Trigger: TTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCA...CTCCTGTACTCCCTGAGTGGACCAGATCTCTCTACAGCCCTCATGCACTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | CACTCAGGGAGTACAGGAGGCCGATGCCGAGAAAGGGAACGATGTTTTCAAGATCGCAGTCTTCTGGGTTaGCAAAAACCTTGTTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSGSTGGRCRERERCFQDRSLLG*QKPCWL Trigger: TAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCG...ATCTTGAAAACATCGTTCCCTTTCTCGGCATCGGCCTCCTGTACTCCCTGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | AGCACCTACAAAGATTCTGAAGTGCATGAGGGCTGTAGAGAGATCTGGTCCACTGCCAGCGCAGTCTTCTaGGTTGGCAAAAACCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: STYKDSEVHEGCREIWSTASAVF*VGKNLV Trigger: AACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGC...AGTGGACCAGATCTCTCTACAGCCCTCATGCACTTCAGAATCTTTGTAGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
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| CDS-3UTR GCA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAACTGGAGACCCCACCTaGCTGTCTCTGGAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FLCSFHALKPQKEFESTETGDPT*LSLEPC Trigger: ACAGGGCTCCAGAGACAGGCAGGTGGGGTCTCCAGT...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR CCA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAATGCCAAGCCCCTGTTTaGCTGAGGAAGGGGAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: FLCSFHALKPQKEFESTECQAPV*LRKGSQ Trigger: TTGACTCCCCTTCCTCAGCCAAACAGGGGCTTGGCA...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000140932.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAATGGTACAATGGAGACTaGAGACCCCACCTGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLCSFHALKPQKEFESTEWYNGD*RPHLPV Trigger: GACAGGCAGGTGGGGTCTCCAGTCTCCATTGTACCA...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTGGCCAGGTGGTACAATaGAGACTGGAGACCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: EPTDASLLTEFSLIPNFSGQVVQ*RLETPP Trigger: AGGTGGGGTCTCCAGTCTCCATTGTACCACCTGGCC...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR CCA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAGGCTGTAGAGAGATCTaGTCCACTCAGGGAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: FLCSFHALKPQKEFESTEGCREI*STQGVQ Trigger: CTGTACTCCCTGAGTGGACCAGATCTCTCTACAGCC...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTTGCCAAGCCCCTGTTTaGCTGAGGAAGGGGAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: EPTDASLLTEFSLIPNFSCQAPV*LRKGSQ Trigger: TTGACTCCCCTTCCTCAGCCAAACAGGGGCTTGGCA...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000140932.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAGTCTCAGTCTTCAAATaGCCAGGATGCCTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FLCSFHALKPQKEFESTEVSVFK*PGCLSG Trigger: TCCTGACAGGCATCCTGGTCATTTGAAGACTGAGAC...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR GCA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAGGTTATCCTCTGGAATaGGGTCGCAGAGCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: FLCSFHALKPQKEFESTEGYPLE*GRRAHE Trigger: TTCATGAGCTCTGCGACCGCATTCCAGAGGATAACC...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATATGCCAAGCCCCTGTTTaGCTGAGGAAGGGGAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENICQAPV*LRKGSQ Trigger: TTGACTCCCCTTCCTCAGCCAAACAGGGGCTTGGCA...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000140932.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAATGCCCACCAGTTGACTaGAAACAGCTTGGGATGAAA | + |
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Preference number: 4 (lower is better) Translates to: FLCSFHALKPQKEFESTECPPVD*KQLGMK Trigger: TTTCATCCCAAGCTGTTTTCAGTCAACTGGTGGGCA...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR TCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGGATGCCCACCAGTTaGCTGAAAACAGCTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENIGMPTS*LKTAWD Trigger: ATCCCAAGCTGTTTTCAGTCAACTGGTGGGCATCCC...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR GCA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTGGTTATCCTCTGGAATaGGGTCGCAGAGCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: EPTDASLLTEFSLIPNFSGYPLE*GRRAHE Trigger: TTCATGAGCTCTGCGACCGCATTCCAGAGGATAACC...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTTTGTTGGTTATCCTCTaGAATGCGGTCGCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EPTDASLLTEFSLIPNFSLLVIL*NAVAEL Trigger: GAGCTCTGCGACCGCATTCCAGAGGATAACCAACAA...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGCTGTAGAGAGATCTaGTCCACTCAGGGAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENIGCREI*STQGVQ Trigger: CTGTACTCCCTGAGTGGACCAGATCTCTCTACAGCC...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGAGGCTGTAGAGAGATCTaGTCCACTCAGGGAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: SFHALKPQKEFESTENIGGCREI*STQGVQ Trigger: CTGTACTCCCTGAGTGGACCAGATCTCTCTACAGCC...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 |
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| CDS-3UTR GCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGTTATCCTCTGGAATaGGGTCGCAGAGCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENIGYPLE*GRRAHE Trigger: TTCATGAGCTCTGCGACCGCATTCCAGAGGATAACC...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGAGGTTATCCTCTGGAATaGGGTCGCAGAGCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: SFHALKPQKEFESTENIGGYPLE*GRRAHE Trigger: TTCATGAGCTCTGCGACCGCATTCCAGAGGATAACC...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGATTGTTGGTTATCCTCTaGAATGCGGTCGCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SFHALKPQKEFESTENIGLLVIL*NAVAEL Trigger: GAGCTCTGCGACCGCATTCCAGAGGATAACCAACAA...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATATTGTTGGTTATCCTCTaGAATGCGGTCGCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENILLVIL*NAVAEL Trigger: GAGCTCTGCGACCGCATTCCAGAGGATAACCAACAA...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGCCAGCGCAGTCTTCTaGGTTGGCAAAAACCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENIASAVF*VGKNLV Trigger: AACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGC...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGAGCCAGCGCAGTCTTCTaGGTTGGCAAAAACCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SFHALKPQKEFESTENIGASAVF*VGKNLV Trigger: AACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGC...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAATGCGAACAAACTTCTTaGCATTCTCTCCCTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: FLCSFHALKPQKEFESTECEQTS*HSLPCQ Trigger: TTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCA...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTGAGTCAAGTAAGCAATaGTGTGGTAGATCCGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: EPTDASLLTEFSLIPNFSESSKQ*CGRSEH Trigger: GTGCTCGGATCTACCACACCATTGCTTACTTGACTC...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000140932.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTCGCAGTCTTCTGGGTTaGCAAAAACCTTGTTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: EPTDASLLTEFSLIPNFSRSLLG*QKPCWL Trigger: TAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCG...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTTGCGAACAAACTTCTTaGCATTCTCTCCCTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: EPTDASLLTEFSLIPNFSCEQTS*HSLPCQ Trigger: TTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCA...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGAGAGTCAAGTAAGCAATaGTGTGGTAGATCCGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SFHALKPQKEFESTENIGESSKQ*CGRSEH Trigger: GTGCTCGGATCTACCACACCATTGCTTACTTGACTC...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000140932.2 |
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| CDS-3UTR CCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGAGTCAAGTAAGCAATaGTGTGGTAGATCCGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENIESSKQ*CGRSEH Trigger: GTGCTCGGATCTACCACACCATTGCTTACTTGACTC...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000140932.2 |
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| CDS-3UTR TCA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGAGAAAACAGCTTGGGATaGAAGACTCCGACACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SFHALKPQKEFESTENIGENSLG*KTPTQK Trigger: TTTCTGTGTCGGAGTCTTTCATCCCAAGCTGTTTTC...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGACGCAGTCTTCTGGGTTaGCAAAAACCTTGTTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: SFHALKPQKEFESTENIGRSLLG*QKPCWL Trigger: TAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCG...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATACGCAGTCTTCTGGGTTaGCAAAAACCTTGTTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENIRSLLG*QKPCWL Trigger: TAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCG...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGATGCGAACAAACTTCTTaGCATTCTCTCCCTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SFHALKPQKEFESTENIGCEQTS*HSLPCQ Trigger: TTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCA...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAATAAATAAGGCCAGGTaGTACAATGGAGACTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENIINKAR*YNGDWR Trigger: TCTCCAGTCTCCATTGTACCACCTGGCCTTATTTAT...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR CCA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATACCATGCTTCCAATCTTaGTCTCAGTCTTCAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: CSFHALKPQKEFESTENIPCFQS*SQSSND Trigger: GTCATTTGAAGACTGAGACCAAGATTGGAAGCATGG...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS GCA 90 bp | GATCATTCAGGTGGGCTCTGCGCACGCGTTCCACCTTCTCGTCAGTaGGAACAAACTTCTTGGCATTCTCTCCCTTGCCAAAGCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DHSGGLCARVPPSRQ*EQTSWHSLPCQSQR Trigger: GCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCACTGACGAGAAGGTGGAACGCGTGCGCAGAGCCCACCTGAATGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCACTCAGGGAGTACAGGAGGCCGATGCCGAGAAAGGGAACGATGTTTTCAGCCATCAACACCTCATaGTCCATGAGCTGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPLREYRRPMPRKGTMFSAINTS*SMSCLR Trigger: CCTCAGGCAGCTCATGGACAATGAGGTGTTGATGGC...TGAAAACATCGTTCCCTTTCTCGGCATCGGCCTCCTGTACTCCCTGAGTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120939.8 ENSMUST00000204628.3 |
||
| CDS GCA 90 bp | AGAATGAAGAGGAAAGTCTGCGCACGCGTTCCACCTTCTCGTCAGTaGGAACAAACTTCTTGGCATTCTCTCCCTTGCCAAAGCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RMKRKVCARVPPSRQ*EQTSWHSLPCQSQR Trigger: GCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCACTGACGAGAAGGTGGAACGCGTGCGCAGACTTTCCTCTTCATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
||
| CDS CCA 90 bp | TCTTGGCATTCTCTCCCTTGCCAAAGCCAGCGCAGTCTTCTGGGTTaGCAAAAACCTTGTTGGTTATCCTCTGGAATGCGGTCGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWHSLPCQSQRSLLG*QKPCWLSSGMRSQS Trigger: GCTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
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| CDS-3UTR CAA 90 bp | TTGGCTGAGGAAGGGGAGTCAAGTAAGCAATGGTGTGGTAGATCCGAGCACCTATTGGCATTCTCTCCCTaGCCAAAGCCAGCGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAEEGESSKQWCGRSEHLLAFSP*PKPAQS Trigger: AGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAA...TAGGTGCTCGGATCTACCACACCATTGCTTACTTGACTCCCCTTCCTCAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
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| CDS GCA 90 bp | CCACCTTCTCGTCAGTGCGAACAAACTTCTTGGCATTCTCTCCCTTaGCAAAGCCAGCGCAGTCTTCTGGGTTGGCAAAAACCTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSRQCEQTSWHSLP*QSQRSLLGWQKPCW Trigger: CCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCACTGACGAGAAGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
||
| CDS GCA 90 bp | TGCCGAGAAAGGGAACGATGTTTTCAAGATCATTCAGGTGGGCTCTaGGCACGCGTTCCACCTTCTCGTCAGTGCGAACAAACTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRERERCFQDHSGGL*ARVPPSRQCEQTSW Trigger: CCAAGAAGTTTGTTCGCACTGACGAGAAGGTGGAACGCGTGCGCAGAGCCCACCTGAATGATCTTGAAAACATCGTTCCCTTTCTCGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 |
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| CDS CCA 90 bp | AAACTTCTTGGCATTCTCTCCCTTGCCAAAGCCAGCGCAGTCTTCTaGGTTGGCAAAAACCTTGTTGGTTATCCTCTGGAATGCGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KLLGILSLAKASAVF*VGKNLVGYPLECGR Trigger: GCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
||
| CDS-3UTR CAA 90 bp | GCACCTACAAAGATTCTGAAGTGCATGAGGGCTGTAGAGAGATCTGGTCCACTCGCGCAGTCTTCTGGGTaGGCAAAAACCTTGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: APTKILKCMRAVERSGPLAQSSG*AKTLLV Trigger: AACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGC...GAGTGGACCAGATCTCTCTACAGCCCTCATGCACTTCAGAATCTTTGTAGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
||
| CDS-3UTR CAA 90 bp | CCGAGCACCTACAAAGATTCTGAAGTGCATGAGGGCTGTAGAGAGATCTGGTCCCATTCAGGTGGGCTCTaGTTGGTTATCCTCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSTYKDSEVHEGCREIWSHSGGL*LVILWN Trigger: ATTCCAGAGGATAACCAACAAGAGCCCACCTGAATG...GGACCAGATCTCTCTACAGCCCTCATGCACTTCAGAATCTTTGTAGGTGCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204628.3 |
||
| CDS CCA 90 bp | CCAGCGCAGTCTTCTGGGTTGGCAAAAACCTTGTTGGTTATCCTCTaGAATGCGGTCGCAGAGCTCATGAACATCATCTTGGTAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PAQSSGLAKTLLVIL*NAVAELMNIILVRM Trigger: CATTCTTACCAAGATGATGTTCATGAGCTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 ENSMUST00000125810.2 |
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| CDS GCA 90 bp | TGCGGTCGCAGAGCTCATGAACATCATCTTGGTAAGAATGATCGTTaGATAGGAGGTAAAGGCCATCAACACCTCATTGTCCATGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGRRAHEHHLGKNDR*IGGKGHQHLIVHEL Trigger: CAGCTCATGGACAATGAGGTGTTGATGGCCTTTACCTCCTATGCAACGATCATTCTTACCAAGATGATGTTCATGAGCTCTGCGACCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 ENSMUST00000125810.2 ENSMUST00000204628.3 |
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| CDS-3UTR CAA 90 bp | ACAATTCTCTTTACAAGTACAGTCTGCTCCTTAGCAGCCTGTAAGCCATTGACAGCCATCAACACCTCATaGTCCATGAGCTGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TILFTSTVCSLAACKPLTAINTS*SMSCLR Trigger: CCTCAGGCAGCTCATGGACAATGAGGTGTTGATGGC...TGTCAATGGCTTACAGGCTGCTAAGGAGCAGACTGTACTTGTAAAGAGAATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120939.8 ENSMUST00000204628.3 |
||
| CDS GCA 90 bp | GCAGTCTTCTGGGTTGGCAAAAACCTTGTTGGTTATCCTCTGGAATaGGGTCGCAGAGCTCATGAACATCATCTTGGTAAGAATGATCGT | + |
|
Preference number: 5 (lower is better) Translates to: AVFWVGKNLVGYPLE*GRRAHEHHLGKNDR Trigger: ACGATCATTCTTACCAAGATGATGTTCATGAGCTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 ENSMUST00000125810.2 |
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| CDS-3UTR CAA 90 bp | GCACCTACAAAGATTCTGAAGTGCATGAGGGCTGTAGAGAGATCTGGTCCACTCATCAGGCCCTGCCATTaGATTATGGAAATAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: APTKILKCMRAVERSGPLIRPCH*IMEIAT Trigger: TGTTGCTATTTCCATAATCAAATGGCAGGGCCTGAT...GAGTGGACCAGATCTCTCTACAGCCCTCATGCACTTCAGAATCTTTGTAGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAGCCATCAACACCTCATaGTCCATGAGCTGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLCSFHALKPQKEFESTEAINTS*SMSCLR Trigger: CCTCAGGCAGCTCATGGACAATGAGGTGTTGATGGC...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS TCA 90 bp | AGAGAGCAAAGGGATGCCCACCAGTTGACTGAAAACAGCTTGGGATaGAAGACTCCGACACAGAAACCATTTTCTTCTACTTTGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: REQRDAHQLTENSLG*KTPTQKPFSSTLKE Trigger: TTCCTTCAAAGTAGAAGAAAATGGTTTCTGTGTCGGAGTCTTTCATCCCAAGCTGTTTTCAGTCAACTGGTGGGCATCCCTTTGCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTGCCATCAACACCTCATaGTCCATGAGCTGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPTDASLLTEFSLIPNFSAINTS*SMSCLR Trigger: CCTCAGGCAGCTCATGGACAATGAGGTGTTGATGGC...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCTGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAGCGCAGTCTTCTGGGTaGGCAAAAACCTTGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLCSFHALKPQKEFESTEAQSSG*AKTLLV Trigger: AACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGC...TTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCAGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATATTGGCATTCTCTCCCTaGCCAAAGCCAGCGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSFHALKPQKEFESTENILAFSP*PKPAQS Trigger: AGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAA...TATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGATTGGCATTCTCTCCCTaGCCAAAGCCAGCGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFHALKPQKEFESTENIGLAFSP*PKPAQS Trigger: AGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAA...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CAA 90 bp | GAGCCTACTGATGCTAGTCTTTTAACTGAATTTTCCCTGATTCCTAATTTCTCTGCGCAGTCTTCTGGGTaGGCAAAAACCTTGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPTDASLLTEFSLIPNFSAQSSG*AKTLLV Trigger: AACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGC...AGAGAAATTAGGAATCAGGGAAAATTCAGTTAAAAGACTAGCATCAGTAGGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGAAGGGATGCCCACCAGTaGACTGAAAACAGCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SFHALKPQKEFESTENIGRDAHQ*TENSLG Trigger: TCCCAAGCTGTTTTCAGTCAACTGGTGGGCATCCCT...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTCACGCATTAAAACCTCAGAAAGAGTTTGAATCCACTGAAAATATAGGACTCATGAACATCATCTaGGTAAGAATGATCGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFHALKPQKEFESTENIGLMNII*VRMIVA Trigger: TGCAACGATCATTCTTACCAAGATGATGTTCATGAG...TCCTATATTTTCAGTGGATTCAAACTCTTTCTGAGGTTTTAATGCGTGAAAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120939.8 |
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| CDS CAA 90 bp | GCTCTGCGCACGCGTTCCACCTTCTCGTCAGTGCGAACAAACTTCTaGGCATTCTCTCCCTTGCCAAAGCCAGCGCAGTCTTCTGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALRTRSTFSSVRTNF*AFSPLPKPAQSSGL Trigger: CAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCACTGACGAGAAGGTGGAACGCGTGCGCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 |
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| CDS CAA 90 bp | AGTCTGCGCACGCGTTCCACCTTCTCGTCAGTGCGAACAAACTTCTaGGCATTCTCTCCCTTGCCAAAGCCAGCGCAGTCTTCTGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLRTRSTFSSVRTNF*AFSPLPKPAQSSGL Trigger: CAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCACTGACGAGAAGGTGGAACGCGTGCGCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120939.8 |
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| CDS CCA 72 bp | CCGAGAAAGGGAACGATGTTTTCAAGATCATTCAGGTaGGCTCTGCGCACGCGTTCCACCTTCTCGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRKGTMFSRSFR*ALRTRSTFSSV Trigger: CACTGACGAGAAGGTGGAACGCGTGCGCAGAGCCCACCTGAATGATCTTGAAAACATCGTTCCCTTTCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 |
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| CDS CAA 72 bp | CCAAAGCCAGCGCAGTCTTCTGGGTTGGCAAAAACCTaGTTGGTTATCCTCTGGAATGCGGTCGCAGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PKPAQSSGLAKT*LVILWNAVAEL Trigger: GAGCTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
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| CDS CAA 72 bp | ACGCGTTCCACCTTCTCGTCAGTGCGAACAAACTTCTaGGCATTCTCTCCCTTGCCAAAGCCAGCGCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TRSTFSSVRTNF*AFSPLPKPAQS Trigger: AGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCACTGACGAGAAGGTGGAACGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
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| CDS GCA 72 bp | AGGGAACGATGTTTTCAAGATCATTCAGGTGGGCTCTaGGCACGCGTTCCACCTTCTCGTCAGTGCGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: RERCFQDHSGGL*ARVPPSRQCEQ Trigger: TTGTTCGCACTGACGAGAAGGTGGAACGCGTGCGCAGAGCCCACCTGAATGATCTTGAAAACATCGTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 |
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| CDS GCA 72 bp | GAGGTAAAGGCCATCAACACCTCATTGTCCATGAGCTaGCTGAGGTCGGCCATGCTTCCAATCTTGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: EVKAINTSLSMS*LRSAMLPILVS Trigger: TGAGACCAAGATTGGAAGCATGGCCGACCTCAGGCAGCTCATGGACAATGAGGTGTTGATGGCCTTTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118091.8 ENSMUST00000125810.2 |
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| CDS CCA 72 bp | TCTCTCCCTTGCCAAAGCCAGCGCAGTCTTCTGGGTTaGCAAAAACCTTGTTGGTTATCCTCTGGAATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLPCQSQRSLLG*QKPCWLSSGMR Trigger: CCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
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| CDS CAA 72 bp | AAGCCAGCGCAGTCTTCTGGGTTGGCAAAAACCTTGTaGGTTATCCTCTGGAATGCGGTCGCAGAGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: KPAQSSGLAKTL*VILWNAVAELM Trigger: CATGAGCTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
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| CDS CAA 90 bp | CCCTTGCCAAAGCCAGCGCAGTCTTCTGGGTTGGCAAAAACCTTGTaGGTTATCCTCTGGAATGCGGTCGCAGAGCTCATGAACATCATC | + |
|
Preference number: 6 (lower is better) Translates to: PLPKPAQSSGLAKTL*VILWNAVAELMNII Trigger: GATGATGTTCATGAGCTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
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| CDS CAA 90 bp | TCTCCCTTGCCAAAGCCAGCGCAGTCTTCTGGGTTGGCAAAAACCTaGTTGGTTATCCTCTGGAATGCGGTCGCAGAGCTCATGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: SPLPKPAQSSGLAKT*LVILWNAVAELMNI Trigger: GATGTTCATGAGCTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
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| CDS CAA 90 bp | TTCTTGGCATTCTCTCCCTTGCCAAAGCCAGCGCAGTCTTCTGGGTaGGCAAAAACCTTGTTGGTTATCCTCTGGAATGCGGTCGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLAFSPLPKPAQSSG*AKTLLVILWNAVAE Trigger: CTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
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| CDS TCA 72 bp | TCGGCCATGCTTCCAATCTTGGTCTCAGTCTTCAAATaGCCAGGATGCCTGTCAGGAGAGAGCAAAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SAMLPILVSVFK*PGCLSGESKGM Trigger: CATCCCTTTGCTCTCTCCTGACAGGCATCCTGGTCATTTGAAGACTGAGACCAAGATTGGAAGCATGGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
||
| CDS GCA 72 bp | CGTCAGTGCGAACAAACTTCTTGGCATTCTCTCCCTTaGCAAAGCCAGCGCAGTCTTCTGGGTTGGCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RQCEQTSWHSLP*QSQRSLLGWQK Trigger: TTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCACTGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
||
| CDS CCA 72 bp | GGCATTCTCTCCCTTGCCAAAGCCAGCGCAGTCTTCTaGGTTGGCAAAAACCTTGTTGGTTATCCTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GILSLAKASAVF*VGKNLVGYPLE Trigger: TTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
||
| CDS CAA 72 bp | TTCTCTCCCTTGCCAAAGCCAGCGCAGTCTTCTGGGTaGGCAAAAACCTTGTTGGTTATCCTCTGGAATGCG | + |
|
Preference number: 6 (lower is better) Translates to: FSPLPKPAQSSG*AKTLLVILWNA Trigger: CGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCAGAAGACTGCGCTGGCTTTGGCAAGGGAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 |
||
| CDS TCA 72 bp | TGTCAGGAGAGAGCAAAGGGATGCCCACCAGTTGACTaGAAACAGCTTGGGATGAAAGACTCCGACACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CQERAKGCPPVD*KQLGMKDSDTE Trigger: TTCTGTGTCGGAGTCTTTCATCCCAAGCTGTTTTCAGTCAACTGGTGGGCATCCCTTTGCTCTCTCCTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118091.8 |
||
| CDS GCA 72 bp | TCATTCAGGTGGGCTCTTGTTGGTTATCCTCTGGAATaGGGTCGCAGAGCTCATGAACATCATCTTGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFRWALVGYPLE*GRRAHEHHLGK Trigger: CTTACCAAGATGATGTTCATGAGCTCTGCGACCGCATTCCAGAGGATAACCAACAAGAGCCCACCTGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204628.3 |
||
| CDS TCA 72 bp | TCGGCCATGCTTCCAATCTTGGTCTCAGTCTTCAAATaGCTTATGGACACCTCAAGTAGGCAACACAGTACC | + |
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Preference number: 6 (lower is better) Translates to: SAMLPILVSVFK*LMDTSSRQHST Trigger: GGTACTGTGTTGCCTACTTGAGGTGTCCATAAGTCATTTGAAGACTGAGACCAAGATTGGAAGCATGGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125810.2 |
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| CDS GCA 72 bp | TGGGTTGGCAAAAACCTTGTTGGTTATCCTCTGGAATaGGGTCGCAGAGCTCATGAACATCATCTTGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: WVGKNLVGYPLE*GRRAHEHHLGK Trigger: CTTACCAAGATGATGTTCATGAGCTCTGCGACCGCATTCCAGAGGATAACCAACAAGGTTTTTGCCAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 ENSMUST00000125810.2 |
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| CDS CCA 72 bp | TGCTTCCAATCTTGGTCTCAGTCTTCAAATGACTTATaGACACCTCAAGTAGGCAACACAGTACCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: CFQSWSQSSNDL*TPQVGNTVPQL Trigger: CAGCTGTGGTACTGTGTTGCCTACTTGAGGTGTCCATAAGTCATTTGAAGACTGAGACCAAGATTGGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125810.2 |
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| CDS GCA 72 bp | AGAGCTCATGAACATCATCTTGGTAAGAATGATCGTTaGATAGGAGGTAAAGGCCATCAACACCTCATTGTC | + |
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Preference number: 6 (lower is better) Translates to: RAHEHHLGKNDR*IGGKGHQHLIV Trigger: GACAATGAGGTGTTGATGGCCTTTACCTCCTATGCAACGATCATTCTTACCAAGATGATGTTCATGAGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000008684.11 ENSMUST00000118091.8 ENSMUST00000120230.8 ENSMUST00000120302.8 ENSMUST00000120939.8 ENSMUST00000125810.2 ENSMUST00000204628.3 |
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