Pregenerated sensors for MGMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054612Ensembl transcript IDs: ENSMUST00000081510.4
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATAGGCCACCCAGGCACAGGAGGCCTATGTACAAGGCACTGGTCTaGCGGCCCACACGGCGGGGTGGAGGACCTGCTCAGAACCAGTTG | + |
|
Preference number: 1 (lower is better) Translates to: HRPPRHRRPMYKALV*RPTRRGGGPAQNQL Trigger: CAACTGGTTCTGAGCAGGTCCTCCACCCCGCCGTGTGGGCCGTCAGACCAGTGCCTTGTACATAGGCCTCCTGTGCCTGGGTGGCCTATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 90 bp | CATTACATAGGCCACCCAGGCACAGGAGGCCTATGTACAAGGCACTaGTCTGACGGCCCACACGGCGGGGTGGAGGACCTGCTCAGAACC | + |
|
Preference number: 1 (lower is better) Translates to: HYIGHPGTGGLCTRH*SDGPHGGVEDLLRT Trigger: GGTTCTGAGCAGGTCCTCCACCCCGCCGTGTGGGCCGTCAGACCAGTGCCTTGTACATAGGCCTCCTGTGCCTGGGTGGCCTATGTAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 90 bp | ACAAGCTGCGCTGCAACCCCGAGCCAGAGCGGCTCCAGGCGACCGTaGTGGTGTTTCATGTCAGCCTCTGCAGAGTTTATCCTTGGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: TSCAATPSQSGSRRP*WCFMSASAEFILGA Trigger: TGCTCCAAGGATAAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTGGCTCGGGGTTGCAGCGCAGCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 90 bp | TCCAAGGGCAGGCCCAAGCACGTCCACTCATCATTCCAGGCTACCTaGAACTGCCAGGTTGCCCTTGTGGCTTTGATGGGGTTGGCGTCC | + |
|
Preference number: 1 (lower is better) Translates to: SKGRPKHVHSSFQAT*NCQVALVALMGLAS Trigger: GGACGCCAACCCCATCAAAGCCACAAGGGCAACCTGGCAGTTCCAGGTAGCCTGGAATGATGAGTGGACGTGCTTGGGCCTGCCCTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 90 bp | AGCTGCGCTGCAACCCCGAGCCAGAGCGGCTCCAGGCGACCGTGCTaGTGTTTCATGTCAGCCTCTGCAGAGTTTATCCTTGGAGCAGTA | + |
|
Preference number: 1 (lower is better) Translates to: SCAATPSQSGSRRPC*CFMSASAEFILGAV Trigger: TACTGCTCCAAGGATAAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTGGCTCGGGGTTGCAGCGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 90 bp | ACCCCAGCCCTTTCCATGGGTCTTGCTGGCCATGTCAGAGAGAGATaGAATGAGCAGAAAACACCCTGGCGAGGCCAGATGGGAGGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: TPALSMGLAGHVRER*NEQKTPWRGQMGGC Trigger: GCACCCTCCCATCTGGCCTCGCCAGGGTGTTTTCTGCTCATTTCATCTCTCTCTGACATGGCCAGCAAGACCCATGGAAAGGGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 90 bp | CCTGCTGCTGTCAACGGCTACCTCGGGGCATCTATGAACCTGTTATaGCAGCACCAAGGAAACCCTCGGAGAGGGGAGCAGACACGGCTT | + |
|
Preference number: 1 (lower is better) Translates to: PAAVNGYLGASMNLL*QHQGNPRRGEQTRL Trigger: AAGCCGTGTCTGCTCCCCTCTCCGAGGGTTTCCTTGGTGCTGTCATAACAGGTTCATAGATGCCCCGAGGTAGCCGTTGACAGCAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 90 bp | CGAGGCCAGATGGGAGGGTGCCAGGGTGCATGCCCAGCCCTGTCCTaGAAACTTATGAGTTATGGGGCTCACATAAATGAGACCCACCTT | + |
|
Preference number: 1 (lower is better) Translates to: RGQMGGCQGACPALS*KLMSYGAHINETHL Trigger: AAGGTGGGTCTCATTTATGTGAGCCCCATAACTCATAAGTTTTCAGGACAGGGCTGGGCATGCACCCTGGCACCCTCCCATCTGGCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 90 bp | ATGTCAGCCTCTGCAGAGTTTATCCTTGGAGCAGTACACGGTCACTaGAGTGAGTCCTGCTGCTGTCAACGGCTACCTCGGGGCATCTAT | + |
|
Preference number: 1 (lower is better) Translates to: MSASAEFILGAVHGH*SESCCCQRLPRGIY Trigger: ATAGATGCCCCGAGGTAGCCGTTGACAGCAGCAGGACTCACTGCAGTGACCGTGTACTGCTCCAAGGATAAACTCTGCAGAGGCTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 90 bp | GCAGAGTTTATCCTTGGAGCAGTACACGGTCACTGCAGTGAGTCCTaGTGCTGTCAACGGCTACCTCGGGGCATCTATGAACCTGTTATG | + |
|
Preference number: 1 (lower is better) Translates to: AEFILGAVHGHCSES*CCQRLPRGIYEPVM Trigger: CATAACAGGTTCATAGATGCCCCGAGGTAGCCGTTGACAGCAGCAGGACTCACTGCAGTGACCGTGTACTGCTCCAAGGATAAACTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 90 bp | TGCACCTGGCTGAGTCTCCTCTCCCTTTTTGGGAACAGTCGACTCTaGAGGTGGGAGGATGATGTAATTGTGAAGCATCGTGTGGTGCCT | + |
|
Preference number: 1 (lower is better) Translates to: CTWLSLLSLFGNSRL*RWEDDVIVKHRVVP Trigger: AGGCACCACACGATGCTTCACAATTACATCATCCTCCCACCTTCAGAGTCGACTGTTCCCAAAAAGGGAGAGGAGACTCAGCCAGGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 90 bp | ACAGTGATTTCCTGGTGCTGGAGAGATACCAGTGTGGCGTTACTCTaGTACAATTACCCCAGCCCTTTCCATGGGTCTTGCTGGCCATGT | + |
|
Preference number: 1 (lower is better) Translates to: TVISWCWRDTSVALL*YNYPSPFHGSCWPC Trigger: ACATGGCCAGCAAGACCCATGGAAAGGGCTGGGGTAATTGTATCAGAGTAACGCCACACTGGTATCTCTCCAGCACCAGGAAATCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 90 bp | TGTAGAAACAAGAAAGGGCAGCCACATCACGTCCCCCAGGACACTTaGAGCTCTTTTAATATAGTGGTGCCACCACACATCCGCTTCCGA | + |
|
Preference number: 1 (lower is better) Translates to: CRNKKGQPHHVPQDT*SSFNIVVPPHIRFR Trigger: TCGGAAGCGGATGTGTGGTGGCACCACTATATTAAAAGAGCTGCAAGTGTCCTGGGGGACGTGATGTGGCTGCCCTTTCTTGTTTCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 90 bp | TACCAGTGTGGCGTTACTCTGATACAATTACCCCAGCCCTTTCCATaGGTCTTGCTGGCCATGTCAGAGAGAGATGAAATGAGCAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: YQCGVTLIQLPQPFP*VLLAMSERDEMSRK Trigger: TTTTCTGCTCATTTCATCTCTCTCTGACATGGCCAGCAAGACCCATGGAAAGGGCTGGGGTAATTGTATCAGAGTAACGCCACACTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 90 bp | AGCATTTCCAAACCAGTGTTTGGAAGATGGTACTATTTTATTTTCTaGTTAATCATCTTGCATCCACCGTGGATACAAGACACTTTCCTG | + |
|
Preference number: 1 (lower is better) Translates to: SISKPVFGRWYYFIF*LIILHPPWIQDTFL Trigger: CAGGAAAGTGTCTTGTATCCACGGTGGATGCAAGATGATTAAGCAGAAAATAAAATAGTACCATCTTCCAAACACTGGTTTGGAAATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCCGCATGTGGCTGTCCCATGCTGGGGGTTCGGCCGTGGATGTCTGTACAGGGGAGGGTGCCAGGGTaGATGCCCAGCCCTGTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LAACGCPMLGVRPWMSVQGRVPG*MPSPVL Trigger: CAGGACAGGGCTGGGCATGCACCCTGGCACCCTCCC...CTGTACAGACATCCACGGCCGAACCCCCAGCATGGGACAGCCACATGCGGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCCGCATGTGGCTGTCCCATGCTGGGGGTTCGGCCGTGGATGTCTGTACAGGGCCAGATGGGAGGGTaGCAGGGTGCATGCCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LAACGCPMLGVRPWMSVQGQMGG*QGACPA Trigger: GGCTGGGCATGCACCCTGGCACCCTCCCATCTGGCC...CTGTACAGACATCCACGGCCGAACCCCCAGCATGGGACAGCCACATGCGGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCGCATGTGGCTGTCCCATGCTGGGGGTTCGGCCGTGGATGTCTGTACAGGTCAGCTGTTTAGTGTaGACGGGCTGGGGTAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LAACGCPMLGVRPWMSVQVSCLV*TGWGSQ Trigger: CTGGCTACCCCAGCCCGTCCACACTAAACAGCTGAC...CTGTACAGACATCCACGGCCGAACCCCCAGCATGGGACAGCCACATGCGGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAGCACCAAGGAAACCCTCGGAGAGGGGAGCAGACACGGCTTTCGCATCGGCCCACACGGCGGGGTaGAGGACCTGCTCAGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: MTAPRKPSERGADTAFASAHTAG*RTCSEP Trigger: TGGTTCTGAGCAGGTCCTCCACCCCGCCGTGTGGGC...CGATGCGAAAGCCGTGTCTGCTCCCCTCTCCGAGGGTTTCCTTGGTGCTGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCGCATGTGGCTGTCCCATGCTGGGGGTTCGGCCGTGGATGTCTGTACAGCTATGTACAAGGCACTaGTCTGACGGCCCACACGGC | + |
|
Preference number: 2 (lower is better) Translates to: LAACGCPMLGVRPWMSVQLCTRH*SDGPHG Trigger: GCCGTGTGGGCCGTCAGACCAGTGCCTTGTACATAG...CTGTACAGACATCCACGGCCGAACCCCCAGCATGGGACAGCCACATGCGGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCGAGGCTCCCAGGAGGCACCATGTCTCCTCCACCTACCACTAGGAGCCTTGGGGTAGCCAGCTGTTaGCTGCAGGTGTCAGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: SSRLPGGTMSPPPTTRSLGVASC*LQVSDV Trigger: CACATCTGACACCTGCAGGCAACAGCTGGCTACCCC...AAGGCTCCTAGTGGTAGGTGGAGGAGACATGGTGCCTCCTGGGAGCCTCGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTTATGACAGCACCAAGGAAACCCTCGGAGAGGGGAGCAGACACGGCTTTCGCATGGGGTTGGCGTCCTaGCCGCATGTGGCTGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: CYDSTKETLGEGSRHGFRMGLAS*PHVAVP Trigger: TGGGACAGCCACATGCGGCCAGGACGCCAACCCCAT...GCGAAAGCCGTGTCTGCTCCCCTCTCCGAGGGTTTCCTTGGTGCTGTCATAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGACACGGCTTTCGCATCGCTCCAAGGGCAGGCCCAAGCACGTCCACTCATACCTTTACAGGTTCCTaGTCCTCGAGGCTCCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SRHGFRIAPRAGPSTSTHTFTGS*SSRLPG Trigger: TCCTGGGAGCCTCGAGGACCAGGAACCTGTAAAGGT...ATGAGTGGACGTGCTTGGGCCTGCCCTTGGAGCGATGCGAAAGCCGTGTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCGCATGTGGCTGTCCCATGCTGGGGGTTCGGCCGTGGATGTCTGTACAGTCGTGTGGTGCCTTATaGCAGATCTGGAGACAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LAACGCPMLGVRPWMSVQSCGAL*QIWRQS Trigger: AGACTGTCTCCAGATCTGCCATAAGGCACCACACGA...CTGTACAGACATCCACGGCCGAACCCCCAGCATGGGACAGCCACATGCGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTTCTCTCATTTTCACAAGCTGCGCTGCAACCCCGAGCCAGAGCGGCTCCAATGGGGGAGCAATGCTaGGACCCCCAACAGAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: LFLSFSQAALQPRARAAPMGEQC*DPQQST Trigger: AGTGCTCTGTTGGGGGTCTCAGCATTGCTCCCCCAT...TGGAGCCGCTCTGGCTCGGGGTTGCAGCGCAGCTTGTGAAAATGAGAGAAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR TCA 90 bp | ATGACAGCACCAAGGAAACCCTCGGAGAGGGGAGCAGACACGGCTTTCGCATCGGAGGCCATGATTCCATaGTGCCATGAGTGGCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: MTAPRKPSERGADTAFASEAMIP*CHEWHL Trigger: CAGGTGCCACTCATGGCATCATGGAATCATGGCCTC...CGATGCGAAAGCCGTGTCTGCTCCCCTCTCCGAGGGTTTCCTTGGTGCTGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGACACGGCTTTCGCATCGCTCCAAGGGCAGGCCCAAGCACGTCCACTCATTGGGGCTCACATAAATaGGACCCACCTTGCTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SRHGFRIAPRAGPSTSTHWGSHK*DPPCSV Trigger: CACAGAGCAAGGTGGGTCTCATTTATGTGAGCCCCA...ATGAGTGGACGTGCTTGGGCCTGCCCTTGGAGCGATGCGAAAGCCGTGTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGACACGGCTTTCGCATCGCTCCAAGGGCAGGCCCAAGCACGTCCACTCATCCTTTCCATGGGTCTTaGTGGCCATGTCAGAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SRHGFRIAPRAGPSTSTHPFHGS*WPCQRE Trigger: CTCTCTCTGACATGGCCAGCAAGACCCATGGAAAGG...ATGAGTGGACGTGCTTGGGCCTGCCCTTGGAGCGATGCGAAAGCCGTGTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGCGGCTCCAGGCGACCGTGCTGGTGTTTCATGTCAGCCTCTGCAGAGTTTGCAGTACACGGTCACTaGAGTGAGTCCTGCTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QSGSRRPCWCFMSASAEFAVHGH*SESCCC Trigger: ACAGCAGCAGGACTCACTGCAGTGACCGTGTACTGC...AAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGCGGCTCCAGGCGACCGTGCTGGTGTTTCATGTCAGCCTCTGCAGAGTTTGCCTTATGGCAGATCTaGAGACAGTCTCCAGCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QSGSRRPCWCFMSASAEFALWQI*RQSPAL Trigger: CAGCGCTGGAGACTGTCTCCAGATCTGCCATAAGGC...AAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR TCA 90 bp | CCCACACGGCGGGGTGGAGGACCTGCTCAGAACCAGTTGACTTCGACCCTGATGCTGAAGGTGGGAGGATaGTGTAATTGTGAAGCATCG | + |
|
Preference number: 2 (lower is better) Translates to: PTRRGGGPAQNQLTSTLMLKVGG*CNCEAS Trigger: CGATGCTTCACAATTACATCATCCTCCCACCTTCAG...CATCAGGGTCGAAGTCAACTGGTTCTGAGCAGGTCCTCCACCCCGCCGTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGACACGGCTTTCGCATCGCTCCAAGGGCAGGCCCAAGCACGTCCACTCATTACAAGACACTTTCCTaGCAGATGGGGGAGCAATGC | + |
|
Preference number: 2 (lower is better) Translates to: SRHGFRIAPRAGPSTSTHYKTLS*QMGEQC Trigger: GCATTGCTCCCCCATCTGCCAGGAAAGTGTCTTGTA...ATGAGTGGACGTGCTTGGGCCTGCCCTTGGAGCGATGCGAAAGCCGTGTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGACACGGCTTTCGCATCGCTCCAAGGGCAGGCCCAAGCACGTCCACTCATGTCCCCCAGGACACTTaGAGCTCTTTTAATATAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SRHGFRIAPRAGPSTSTHVPQDT*SSFNIV Trigger: CACTATATTAAAAGAGCTGCAAGTGTCCTGGGGGAC...ATGAGTGGACGTGCTTGGGCCTGCCCTTGGAGCGATGCGAAAGCCGTGTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTTATGACAGCACCAAGGAAACCCTCGGAGAGGGGAGCAGACACGGCTTTCGCATCAACATGGGCTGCTaGGACCTTTACAGGTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: CYDSTKETLGEGSRHGFRINMGC*DLYRFL Trigger: CAGGAACCTGTAAAGGTCCCAGCAGCCCATGTTGAT...GCGAAAGCCGTGTCTGCTCCCCTCTCCGAGGGTTTCCTTGGTGCTGTCATAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAGCACCAAGGAAACCCTCGGAGAGGGGAGCAGACACGGCTTTCGCATCGGAGCCTGGATCTATTTaGAAGTGCAGAGATCACAAG | + |
|
Preference number: 2 (lower is better) Translates to: MTAPRKPSERGADTAFASEPGSI*KCRDHK Trigger: CTTGTGATCTCTGCACTTCCAAATAGATCCAGGCTC...CGATGCGAAAGCCGTGTCTGCTCCCCTCTCCGAGGGTTTCCTTGGTGCTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGTTTATCCTTGGAGCAGTACACGGTCACTGCAGTGAGTCCTGCTGCTGTCCAGAGAGAGATGAAATaGGCAGAAAACACCCTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: QSLSLEQYTVTAVSPAAVQREMK*AENTLA Trigger: CGCCAGGGTGTTTTCTGCTCATTTCATCTCTCTCTG...GACAGCAGCAGGACTCACTGCAGTGACCGTGTACTGCTCCAAGGATAAACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGCGGCTCCAGGCGACCGTGCTGGTGTTTCATGTCAGCCTCTGCAGAGTTTAAAAACATCATACAGTaGTTTCCTGGTGCTGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QSGSRRPCWCFMSASAEFKNIIQ*FPGAGE Trigger: CTCTCCAGCACCAGGAAATCACTGTATGATGTTTTT...AAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAGAGAGATGAAATGAGCAGAAAACACCCTGGCGAGGCCAGATGGGAGGGTTGCATGAGATCAACATaGGCTGCTGGGACCTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: SERDEMSRKHPGEARWEGCMRST*AAGTFT Trigger: TGTAAAGGTCCCAGCAGCCCATGTTGATCTCATGCA...ACCCTCCCATCTGGCCTCGCCAGGGTGTTTTCTGCTCATTTCATCTCTCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CAA 90 bp | GGATGTCTGTACAGCCCCAGGCTCCTCTTAAGAGCCTGGATCTATTaGGAAGTGCAGAGATCACAAGGAAAGCTCCCATTACATAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GCLYSPRLLLRAWIY*EVQRSQGKLPLHRP Trigger: TGGCCTATGTAATGGGAGCTTTCCTTGTGATCTCTGCACTTCCAAATAGATCCAGGCTCTTAAGAGGAGCCTGGGGCTGTACAGACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CAA 90 bp | TGTGGCGTTACTCTGATACAATTACCCCAGCCCTTTCCATGGGTCTaGCTGGCCATGTCAGAGAGAGATGAAATGAGCAGAAAACACCCT | + |
|
Preference number: 2 (lower is better) Translates to: CGVTLIQLPQPFPWV*LAMSERDEMSRKHP Trigger: AGGGTGTTTTCTGCTCATTTCATCTCTCTCTGACATGGCCAGCAAGACCCATGGAAAGGGCTGGGGTAATTGTATCAGAGTAACGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR TCA 90 bp | TTCTGCTTAATCATCTTGCATCCACCGTGGATACAAGACACTTTCCTGGCAGATAAATGGCTTGAAGGATaGGTTGGGGGCCCTATCGGG | + |
|
Preference number: 2 (lower is better) Translates to: FCLIILHPPWIQDTFLADKWLEG*VGGPIG Trigger: CCCGATAGGGCCCCCAACTCATCCTTCAAGCCATTT...ATCTGCCAGGAAAGTGTCTTGTATCCACGGTGGATGCAAGATGATTAAGCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | GATGCCATGAGTGGCACCTGCTGTCAGAGAGGCCACCATAAAACCAAGCTCTCCCCAGTGTTTGGAAGATaGTACTATTTTATTTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: DAMSGTCCQRGHHKTKLSPVFGR*YYFIFC Trigger: GCAGAAAATAAAATAGTACCATCTTCCAAACACTGG...GGAGAGCTTGGTTTTATGGTGGCCTCTCTGACAGCAGGTGCCACTCATGGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCAGAGAGAGATGAAATGAGCAGAAAACACCCTGGCGAGGCCAGATGGGAGCTCTGTGATGATAGGTaGAAACCAAATTCAGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: MSERDEMSRKHPGEARWELCDDR*KPNSES Trigger: ACTTTCTGAATTTGGTTTTCACCTATCATCACAGAG...CTCCCATCTGGCCTCGCCAGGGTGTTTTCTGCTCATTTCATCTCTCTCTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CCA 90 bp | CTTAAGAGCCTGGATCTATTTGGAAGTGCAGAGATCACAAGGAAAGCTCCCATTCATACAGTGATTTCCTaGTGCTGGAGAGATACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LKSLDLFGSAEITRKAPIHTVIS*CWRDTS Trigger: ACTGGTATCTCTCCAGCACCAGGAAATCACTGTATG...AATGGGAGCTTTCCTTGTGATCTCTGCACTTCCAAATAGATCCAGGCTCTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | CCCAGGCACAGGAGGCCTATGTACAAGGCACTGGTCTaGCGGCCCACACGGCGGGGTGGAGGACCTGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRHRRPMYKALV*RPTRRGGGPAQ Trigger: CTGAGCAGGTCCTCCACCCCGCCGTGTGGGCCGTCAGACCAGTGCCTTGTACATAGGCCTCCTGTGCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | CAGGTTGCCCTTGTGGCTTTGATGGGGTTGGCGTCCTaGCCGCATGTGGCTGTCCCATGCTGGGGGTTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: QVALVALMGLAS*PHVAVPCWGFG Trigger: GCCGAACCCCCAGCATGGGACAGCCACATGCGGCCAGGACGCCAACCCCATCAAAGCCACAAGGGCAACCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | AGGCTACCTGGAACTGCCAGGTTGCCCTTGTGGCTTTaGTGGGGTTGGCGTCCTGGCCGCATGTGGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RLPGTARLPLWL*WGWRPGRMWLS Trigger: GGACAGCCACATGCGGCCAGGACGCCAACCCCATCAAAGCCACAAGGGCAACCTGGCAGTTCCAGGTAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | GATGAAATGAGCAGAAAACACCCTGGCGAGGCCAGATaGGAGGGTGCCAGGGTGCATGCCCAGCCCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DEMSRKHPGEAR*EGARVHAQPCP Trigger: AGGACAGGGCTGGGCATGCACCCTGGCACCCTCCCATCTGGCCTCGCCAGGGTGTTTTCTGCTCATTTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCACACGGCGGGGTGGAGGACCTGCTCAGAACCAGTTGACTTCGACCCTGATGCCACAGTGCCCTCTGTaGGAACACACACATACACGG | + |
|
Preference number: 3 (lower is better) Translates to: PTRRGGGPAQNQLTSTLMPQCPL*EHTHTR Trigger: CCGTGTATGTGTGTGTTCCAACAGAGGGCACTGTGG...CATCAGGGTCGAAGTCAACTGGTTCTGAGCAGGTCCTCCACCCCGCCGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | TTGACTTCGACCCTGATGCCCACCTTCCAACTCCTCTaGAGGCAGAGTGGAGGCTGGGGTCTCCCCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LTSTLMPTFQLL*RQSGGWGLPST Trigger: TGTGCTGGGGAGACCCCAGCCTCCACTCTGCCTTCAGAGGAGTTGGAAGGTGGGCATCAGGGTCGAAGTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | GGAGGCTGGGGTCTCCCCAGCACACTGCAGCCACAGTaGCCTCTGTTGGAACACACACATACACGGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GGWGLPSTLQPQ*PLLEHTHTRLF Trigger: AAAGAGCCGTGTATGTGTGTGTTCCAACAGAGGGCACTGTGGCTGCAGTGTGCTGGGGAGACCCCAGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | CCACTCATCATTCCAGGCTACCTGGAACTGCCAGGTTaGCCTTGTGGCTTTGATGGGGTTGGCGTCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLIIPGYLELPG*PCGFDGVGVLA Trigger: GGCCAGGACGCCAACCCCATCAAAGCCACAAGGGCAACCTGGCAGTTCCAGGTAGCCTGGAATGATGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | TGCCTTTCCTCTTTCTCTCATTTTCACAAGCTGCGCTaGAACCCCGAGCCAGAGCGGCTCCAGGCGACCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLSSFSHFHKLR*NPEPERLQATV Trigger: CACGGTCGCCTGGAGCCGCTCTGGCTCGGGGTTGCAGCGCAGCTTGTGAAAATGAGAGAAAGAGGAAAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | TATCGGGGTGGGGTCAGCTGTTTAGTGTGGACGGGCTaGGGTAGCCAGCTGTTGCCTGCAGGTGTCAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: YRGGVSCLVWTG*GSQLLPAGVRC Trigger: ACATCTGACACCTGCAGGCAACAGCTGGCTACCCCAGCCCGTCCACACTAAACAGCTGACCCCACCCCGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | GCAACCCCGAGCCAGAGCGGCTCCAGGCGACCGTGCTaGTGTTTCATGTCAGCCTCTGCAGAGTTTATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ATPSQSGSRRPC*CFMSASAEFIL Trigger: AAGGATAAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTGGCTCGGGGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCACACGGCGGGGTGGAGGACCTGCTCAGAACCAGTTGACTTCGACCCTGATGGTCTCCTCTCCCTTTTaGGGAACAGTCGACTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PTRRGGGPAQNQLTSTLMVSSPF*GTVDSE Trigger: TTCAGAGTCGACTGTTCCCAAAAAGGGAGAGGAGAC...CATCAGGGTCGAAGTCAACTGGTTCTGAGCAGGTCCTCCACCCCGCCGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | AACACCCTGGCGAGGCCAGATGGGAGGGTGCCAGGGTaGATGCCCAGCCCTGTCCTGAAAACTTATGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: NTLARPDGRVPG*MPSPVLKTYEL Trigger: TAACTCATAAGTTTTCAGGACAGGGCTGGGCATGCACCCTGGCACCCTCCCATCTGGCCTCGCCAGGGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | CCTCCAGCCAGCAAGGGTGGGAGATTAGGGCCTGAATaGGGGCTGCCATCTCCACAGGGTAAATGGCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PPASKGGRLGPE*GLPSPQGKWLE Trigger: TTCAAGCCATTTACCCTGTGGAGATGGCAGCCCCCATTCAGGCCCTAATCTCCCACCCTTGCTGGCTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | AGATCAACATGGGCTGCTGGGACCTTTACAGGTTCCTaGTCCTCGAGGCTCCCAGGAGGCACCATGTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RSTWAAGTFTGS*SSRLPGGTMSP Trigger: AGGAGACATGGTGCCTCCTGGGAGCCTCGAGGACCAGGAACCTGTAAAGGTCCCAGCAGCCCATGTTGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | AGGCCCAAGCACGTCCACTCATCATTCCAGGCTACCTaGAACTGCCAGGTTGCCCTTGTGGCTTTGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RPKHVHSSFQAT*NCQVALVALMG Trigger: CCCCATCAAAGCCACAAGGGCAACCTGGCAGTTCCAGGTAGCCTGGAATGATGAGTGGACGTGCTTGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CAA 90 bp | GATGCCATGAGTGGCACCTGCTGTCAGAGAGGCCACCATAAAACCAAGCTCTCCTGGGGTAGCCAGCTGTaGCCTGCAGGTGTCAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: DAMSGTCCQRGHHKTKLSWGSQL*PAGVRC Trigger: ACATCTGACACCTGCAGGCAACAGCTGGCTACCCCA...GGAGAGCTTGGTTTTATGGTGGCCTCTCTGACAGCAGGTGCCACTCATGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTTATGACAGCACCAAGGAAACCCTCGGAGAGGGGAGCAGACACGGCTTTCGCCACAGGGTAAATGGCTaGAAGGATGAGTTGGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CYDSTKETLGEGSRHGFRHRVNG*KDELGA Trigger: GGCCCCCAACTCATCCTTCAAGCCATTTACCCTGTG...GCGAAAGCCGTGTCTGCTCCCCTCTCCGAGGGTTTCCTTGGTGCTGTCATAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | GTCAACGGCTACCTCGGGGCATCTATGAACCTGTTATaGCAGCACCAAGGAAACCCTCGGAGAGGGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VNGYLGASMNLL*QHQGNPRRGEQ Trigger: CTGCTCCCCTCTCCGAGGGTTTCCTTGGTGCTGTCATAACAGGTTCATAGATGCCCCGAGGTAGCCGTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | AAGCACGTCCACTCATCATTCCAGGCTACCTGGAACTaGCAGGTTGCCCTTGTGGCTTTGATGGGGTTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: KHVHSSFQATWN*QVALVALMGLA Trigger: CGCCAACCCCATCAAAGCCACAAGGGCAACCTGGCAGTTCCAGGTAGCCTGGAATGATGAGTGGACGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | GCATCCACCGTGGATACAAGACACTTTCCTGGCAGATaGGGGAGCAATGCTGAGACCCCCAACAGAGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: ASTVDTRHFPGR*GSNAETPNRAL Trigger: GAGTGCTCTGTTGGGGGTCTCAGCATTGCTCCCCCATCTGCCAGGAAAGTGTCTTGTATCCACGGTGGATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | GTCCTGCTGCTGTCAACGGCTACCTCGGGGCATCTATaGACCTGTTATGACAGCACCAAGGAAACCCTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLLLSTATSGHL*TCYDSTKETLG Trigger: TCCGAGGGTTTCCTTGGTGCTGTCATAACAGGTTCATAGATGCCCCGAGGTAGCCGTTGACAGCAGCAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | TCTGCAGAGTTTATCCTTGGAGCAGTACACGGTCACTaGAGTGAGTCCTGCTGCTGTCAACGGCTACCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: SAEFILGAVHGH*SESCCCQRLPR Trigger: CCGAGGTAGCCGTTGACAGCAGCAGGACTCACTGCAGTGACCGTGTACTGCTCCAAGGATAAACTCTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | CTCCAGGCGACCGTGCTGGTGTTTCATGTCAGCCTCTaGAGAGTTTATCCTTGGAGCAGTACACGGTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LQATVLVFHVSL*RVYPWSSTRSL Trigger: CAGTGACCGTGTACTGCTCCAAGGATAAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | AATTGTGAAGCATCGTGTGGTGCCTTATGGCAGATCTaGAGACAGTCTCCAGCGCTGGTGGCAGCATGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NCEASCGALWQI*RQSPALVAACA Trigger: AGCACATGCTGCCACCAGCGCTGGAGACTGTCTCCAGATCTGCCATAAGGCACCACACGATGCTTCACAATT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCGGCTCCAGGCGACCGTGCTGGTGTTTCATGTCAGCCTCTGCAGAGTTTAGAGCCTGGATCTATTaGGAAGTGCAGAGATCACAA | + |
|
Preference number: 3 (lower is better) Translates to: QSGSRRPCWCFMSASAEFRAWIY*EVQRSQ Trigger: TTGTGATCTCTGCACTTCCAAATAGATCCAGGCTCT...AAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | ATGGGAGGGTGCCAGGGTGCATGCCCAGCCCTGTCCTaGAAACTTATGAGTTATGGGGCTCACATAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: MGGCQGACPALS*KLMSYGAHINE Trigger: CTCATTTATGTGAGCCCCATAACTCATAAGTTTTCAGGACAGGGCTGGGCATGCACCCTGGCACCCTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | CTTTCCATGGGTCTTGCTGGCCATGTCAGAGAGAGATaGAATGAGCAGAAAACACCCTGGCGAGGCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LSMGLAGHVRER*NEQKTPWRGQM Trigger: CATCTGGCCTCGCCAGGGTGTTTTCTGCTCATTTCATCTCTCTCTGACATGGCCAGCAAGACCCATGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | TCCTGGTGCTGGAGAGATACCAGTGTGGCGTTACTCTaGTACAATTACCCCAGCCCTTTCCATGGGTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SWCWRDTSVALL*YNYPSPFHGSC Trigger: GCAAGACCCATGGAAAGGGCTGGGGTAATTGTATCAGAGTAACGCCACACTGGTATCTCTCCAGCACCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | AAGAAAGGGCAGCCACATCACGTCCCCCAGGACACTTaGAGCTCTTTTAATATAGTGGTGCCACCACACATC | + |
|
Preference number: 3 (lower is better) Translates to: KKGQPHHVPQDT*SSFNIVVPPHI Trigger: GATGTGTGGTGGCACCACTATATTAAAAGAGCTGCAAGTGTCCTGGGGGACGTGATGTGGCTGCCCTTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | CAATCGTATGCTGTTTTACCTAGCCATGCACCTGGCTaGGTCTCCTCTCCCTTTTTGGGAACAGTCGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: QSYAVLPSHAPG*VSSPFLGTVDS Trigger: AGAGTCGACTGTTCCCAAAAAGGGAGAGGAGACTCAGCCAGGTGCATGGCTAGGTAAAACAGCATACGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | GGCGTTACTCTGATACAATTACCCCAGCCCTTTCCATaGGTCTTGCTGGCCATGTCAGAGAGAGATGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: GVTLIQLPQPFP*VLLAMSERDEM Trigger: CATTTCATCTCTCTCTGACATGGCCAGCAAGACCCATGGAAAGGGCTGGGGTAATTGTATCAGAGTAACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CCA 72 bp | GGATGTCTGTACAGCCCCAGGCTCCTCTTAAGAGCCTaGATCTATTTGGAAGTGCAGAGATCACAAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GCLYSPRLLLRA*IYLEVQRSQGK Trigger: CTTTCCTTGTGATCTCTGCACTTCCAAATAGATCCAGGCTCTTAAGAGGAGCCTGGGGCTGTACAGACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | CCTTTTTGGGAACAGTCGACTCTGAAGGTGGGAGGATaGTGTAATTGTGAAGCATCGTGTGGTGCCTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: PFWEQSTLKVGG*CNCEASCGALW Trigger: CCATAAGGCACCACACGATGCTTCACAATTACATCATCCTCCCACCTTCAGAGTCGACTGTTCCCAAAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR TCA 72 bp | CTGAGTCTCCTCTCCCTTTTTGGGAACAGTCGACTCTaGAGGTGGGAGGATGATGTAATTGTGAAGCATCGT | + |
|
Preference number: 3 (lower is better) Translates to: LSLLSLFGNSRL*RWEDDVIVKHR Trigger: ACGATGCTTCACAATTACATCATCCTCCCACCTTCAGAGTCGACTGTTCCCAAAAAGGGAGAGGAGACTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR GCA 72 bp | AAACCAGTGTTTGGAAGATGGTACTATTTTATTTTCTaGTTAATCATCTTGCATCCACCGTGGATACAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KPVFGRWYYFIF*LIILHPPWIQD Trigger: GTCTTGTATCCACGGTGGATGCAAGATGATTAAGCAGAAAATAAAATAGTACCATCTTCCAAACACTGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCCTCCAGCCAGCAAGGGTGGGAGATTAGGGCCTGAATGGGGGCTGCCACAAGCCCTTGGAGGCTaGCTGTCCGGTCGGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSPPASKGGRLGPEWGLPQALGG*LSGRDA Trigger: GGCATCCCGACCGGACAGCCAGCCTCCAAGGGCTTG...TGGCAGCCCCCATTCAGGCCCTAATCTCCCACCCTTGCTGGCTGGAGGGGAGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR CCA 90 bp | CCCACACGGCGGGGTGGAGGACCTGCTCAGAACCAGTTGACTTCGACCCTGATGCTGCACGAGCCGCTTTaGGGTTGCCTGCCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTRRGGGPAQNQLTSTLMLHEPL*GCLPGL Trigger: CAGCCCTGGCAGGCAACCCCAAAGCGGCTCGTGCAG...CATCAGGGTCGAAGTCAACTGGTTCTGAGCAGGTCCTCCACCCCGCCGTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CAA 72 bp | CCCACACGGCGGGGTGGAGGACCTGCTCAGAACCAGTaGACTTCGACCCTGATGCCCACCTTCCAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTRRGGGPAQNQ*TSTLMPTFQLL Trigger: GAGGAGTTGGAAGGTGGGCATCAGGGTCGAAGTCAACTGGTTCTGAGCAGGTCCTCCACCCCGCCGTGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCTCTCATTTTCACAAGCTGCGCTGCAACCCCGAGCCAGAGCGGCTCCACCCTGTGGCAGGGGATaGGGATGGGGACCGGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLSFSQAALQPRARAAPPCGRG*GWGPDC Trigger: GCAATCCGGTCCCCATCCTCATCCCCTGCCACAGGG...TGGAGCCGCTCTGGCTCGGGGTTGCAGCGCAGCTTGTGAAAATGAGAGAAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR CCA 90 bp | CAGAGCGGCTCCAGGCGACCGTGCTGGTGTTTCATGTCAGCCTCTGCAGAGTTTCTGCGAACCACCCTGTaGCAGGGGATGAGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSGSRRPCWCFMSASAEFLRTTL*QGMRMG Trigger: CCCCATCCTCATCCCCTGCCACAGGGTGGTTCGCAG...AAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCCAGCACACTGCAGCCACAGTGCCCTCTGTTGGAACACACACATACACCTGCACCAGAGGCTCTaGAACTCCCTCTGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VSPAHCSHSALCWNTHIHLHQRL*NSLWPT Trigger: GGTGGGCCAGAGGGAGTTCCAGAGCCTCTGGTGCAG...GTGTATGTGTGTGTTCCAACAGAGGGCACTGTGGCTGCAGTGTGCTGGGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR GCA 90 bp | CAGAGCGGCTCCAGGCGACCGTGCTGGTGTTTCATGTCAGCCTCTGCAGAGTTTGAGCCGCTTTGGGGTTaGCTGCCAGGGCTGCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: QSGSRRPCWCFMSASAEFEPLWG*LPGLLI Trigger: AATTAGCAGCCCTGGCAGGCAACCCCAAAGCGGCTC...AAACTCTGCAGAGGCTGACATGAAACACCAGCACGGTCGCCTGGAGCCGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR TCA 90 bp | GTCTCCCCAGCACACTGCAGCCACAGTGCCCTCTGTTGGAACACACACATACACTGCTGGAACACAGGGTaGTGGAGAGCAGGCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPAHCSHSALCWNTHIHCWNTG*WRAGKG Trigger: TCCCTTGCCTGCTCTCCATCACCCTGTGTTCCAGCA...GTGTATGTGTGTGTTCCAACAGAGGGCACTGTGGCTGCAGTGTGCTGGGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAGAGATGAAATGAGCAGAAAACACCCTGGCGAGGCCAGATGGGAGGGTAAGCCCCTCTGTGGCTaGGGGTTCACGGAAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SERDEMSRKHPGEARWEGKPLCG*GFTEIG Trigger: GCCTATTTCCGTGAACCCGCAGCCACAGAGGGGCTT...ACCCTCCCATCTGGCCTCGCCAGGGTGTTTTCTGCTCATTTCATCTCTCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR GCA 90 bp | GTGGATACAAGACACTTTCCTGGCAGATGGGGGAGCAATGCTGAGACCCCCAACCATTGCTCCTCCTACTaGACGAGCCGCTTTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VDTRHFPGRWGSNAETPNHCSSY*TSRFGV Trigger: AACCCCAAAGCGGCTCGTGCAGTAGGAGGAGCAATG...GTTGGGGGTCTCAGCATTGCTCCCCCATCTGCCAGGAAAGTGTCTTGTATCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CAA 72 bp | AGCTGTTTAGTGTGGACGGGCTGGGGTAGCCAGCTGTaGCCTGCAGGTGTCAGATGTGTCTCCCTTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: SCLVWTGWGSQL*PAGVRCVSLHT Trigger: TGTATGAAGGGAGACACATCTGACACCTGCAGGCAACAGCTGGCTACCCCAGCCCGTCCACACTAAACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR TCA 90 bp | GATGCCATGAGTGGCACCTGCTGTCAGAGAGGCCACCATAAAACCAAGCTCTCCCACCTGTCTGGTGAATaGATCTTGCTGGAACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DAMSGTCCQRGHHKTKLSHLSGE*ILLEHR Trigger: CCTGTGTTCCAGCAAGATTCATTCACCAGACAGGTG...GGAGAGCTTGGTTTTATGGTGGCCTCTCTGACAGCAGGTGCCACTCATGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CAA 72 bp | GCTGGTGTTTCATGTCAGCCTCTGCAGAGTTTATCCTaGGAGCAGTACACGGTCACTGCAGTGAGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGVSCQPLQSLS*EQYTVTAVSPA Trigger: AGCAGGACTCACTGCAGTGACCGTGTACTGCTCCAAGGATAAACTCTGCAGAGGCTGACATGAAACACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CAA 72 bp | ACTCTGATACAATTACCCCAGCCCTTTCCATGGGTCTaGCTGGCCATGTCAGAGAGAGATGAAATGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLIQLPQPFPWV*LAMSERDEMSR Trigger: TCTGCTCATTTCATCTCTCTCTGACATGGCCAGCAAGACCCATGGAAAGGGCTGGGGTAATTGTATCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR TCA 90 bp | CTTAAGAGCCTGGATCTATTTGGAAGTGCAGAGATCACAAGGAAAGCTCCCATTATAACACCTGTCTGGTaGATGAATCTTGCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LKSLDLFGSAEITRKAPIITPVW*MNLAGT Trigger: TGTTCCAGCAAGATTCATTCACCAGACAGGTGTTAT...AATGGGAGCTTTCCTTGTGATCTCTGCACTTCCAAATAGATCCAGGCTCTTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| 3UTR CAA 72 bp | GGAAGATGGTACTATTTTATTTTCTGCTTAATCATCTaGCATCCACCGTGGATACAAGACACTTTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRWYYFIFCLII*HPPWIQDTFLA Trigger: TGCCAGGAAAGTGTCTTGTATCCACGGTGGATGCAAGATGATTAAGCAGAAAATAAAATAGTACCATCTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 90 bp | TTCCAGCCAGGCTGTGCACTGCACCAGAGGCTCTGGAACTCCCTCTaGCCCACCGAGCACCTCAGGAGTAGCTGGGGCCTCTGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FQPGCALHQRLWNSL*PTEHLRSSWGLCGV Trigger: GACCCCACAGAGGCCCCAGCTACTCCTGAGGTGCTCGGTGGGCCAGAGGGAGTTCCAGAGCCTCTGGTGCAGTGCACAGCCTGGCTGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS GCA 90 bp | CCTCTGTGGCTGCGGGTTCACGGAAATAGGCTTCCAGCCAGGCTGTaGACTGCACCAGAGGCTCTGGAACTCCCTCTGGCCCACCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLWLRVHGNRLPARL*TAPEALELPLAHRA Trigger: TGCTCGGTGGGCCAGAGGGAGTTCCAGAGCCTCTGGTGCAGTGCACAGCCTGGCTGGAAGCCTATTTCCGTGAACCCGCAGCCACAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR CAA 90 bp | GCCAGCAAGGGTGGGAGATTAGGGCCTGAATGGGGGCTGCCATCTCCACAGGGTCGAGCCGCTTTGGGGTaGCCTGCCAGGGCTGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASKGGRLGPEWGLPSPQGRAALG*PARAAN Trigger: ATTAGCAGCCCTGGCAGGCAACCCCAAAGCGGCTCG...ACCCTGTGGAGATGGCAGCCCCCATTCAGGCCCTAATCTCCCACCCTTGCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 90 bp | AGGCTCTGGAACTCCCTCTGGCCCACCGAGCACCTCAGGAGTAGCTaGGGCCTCTGTGGGGTCAGTGTTTGGGGTCTTCCCACTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RLWNSLWPTEHLRSS*GLCGVSVWGLPTEQ Trigger: TTGCTCAGTGGGAAGACCCCAAACACTGACCCCACAGAGGCCCCAGCTACTCCTGAGGTGCTCGGTGGGCCAGAGGGAGTTCCAGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 90 bp | GCTGGAACACAGGGTGATGGAGAGCAGGCAAGGGAAGCCCCTCTGTaGCTGCGGGTTCACGGAAATAGGCTTCCAGCCAGGCTGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: AGTQGDGEQAREAPL*LRVHGNRLPARLCT Trigger: AGTGCACAGCCTGGCTGGAAGCCTATTTCCGTGAACCCGCAGCCACAGAGGGGCTTCCCTTGCCTGCTCTCCATCACCCTGTGTTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS-3UTR CAA 90 bp | CAAGACACTTTCCTGGCAGATGGGGGAGCAATGCTGAGACCCCCAACAGAGCACGTCAGACCCAAGCCCTaGGAGGCTGGCTGTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QDTFLADGGAMLRPPTEHVRPKP*EAGCPV Trigger: GACCGGACAGCCAGCCTCCAAGGGCTTGGGTCTGAC...GTGCTCTGTTGGGGGTCTCAGCATTGCTCCCCCATCTGCCAGGAAAGTGTCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 90 bp | GGACCGGATTGCTTCTCATTGCTCCTCCTACTGCACGAGCCGCTTTaGGGTTGCCTGCCAGGGCTGCTAATTGCTGGTAAGAAACCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GPDCFSLLLLLHEPL*GCLPGLLIAGKKPF Trigger: AAACGGTTTCTTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCGGCTCGTGCAGTAGGAGGAGCAATGAGAAGCAATCCGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS GCA 90 bp | GATTGCTTCTCATTGCTCCTCCTACTGCACGAGCCGCTTTGGGGTTaGCTGCCAGGGCTGCTAATTGCTGGTAAGAAACCGTTTCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: DCFSLLLLLHEPLWG*LPGLLIAGKKPFLR Trigger: TCGGAGAAACGGTTTCTTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCGGCTCGTGCAGTAGGAGGAGCAATGAGAAGCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS TCA 90 bp | CTCCGAATTTCACAACCTTCAGCAGCTTCCATAACACCTGTCTGGTaGATGAATCTTGCTGGAACACAGGGTGATGGAGAGCAGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRISQPSAASITPVW*MNLAGTQGDGEQAR Trigger: CCTTGCCTGCTCTCCATCACCCTGTGTTCCAGCAAGATTCATTCACCAGACAGGTGTTATGGAAGCTGCTGAAGGTTGTGAAATTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 72 bp | GGCTGTGCACTGCACCAGAGGCTCTGGAACTCCCTCTaGCCCACCGAGCACCTCAGGAGTAGCTGGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GCALHQRLWNSL*PTEHLRSSWGL Trigger: GAGGCCCCAGCTACTCCTGAGGTGCTCGGTGGGCCAGAGGGAGTTCCAGAGCCTCTGGTGCAGTGCACAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS GCA 72 bp | GACCCAAGCCCTTGGAGGCTGGCTGTCCGGTCGGGATaGCCTCATGGGCCAGAAGCCACTCCTTCACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DPSPWRLAVRSG*PHGPEATPSQP Trigger: AGGCTGTGAAGGAGTGGCTTCTGGCCCATGAGGGCATCCCGACCGGACAGCCAGCCTCCAAGGGCTTGGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 72 bp | CCTTCACAGCCTGCCCTCCTCCGGAGTAATGGCCGATaGCACCGTCACTGCGAACCACCCTGTGGCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSQPALLRSNGR*HRHCEPPCGRG Trigger: TCCCCTGCCACAGGGTGGTTCGCAGTGACGGTGCCATCGGCCATTACTCCGGAGGAGGGCAGGCTGTGAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 72 bp | AACTCCCTCTGGCCCACCGAGCACCTCAGGAGTAGCTaGGGCCTCTGTGGGGTCAGTGTTTGGGGTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: NSLWPTEHLRSS*GLCGVSVWGLP Trigger: GGGAAGACCCCAAACACTGACCCCACAGAGGCCCCAGCTACTCCTGAGGTGCTCGGTGGGCCAGAGGGAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS TCA 72 bp | GGGCCTCTGTGGGGTCAGTGTTTGGGGTCTTCCCACTaGGCAACCGTATCCCATGCAGGCCTCGCTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPLWGQCLGSSH*ATVSHAGLAHS Trigger: GCTGTGAGCGAGGCCTGCATGGGATACGGTTGCTCAGTGGGAAGACCCCAAACACTGACCCCACAGAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS GCA 72 bp | GATGGGGACCGGATTGCTTCTCATTGCTCCTCCTACTaGACGAGCCGCTTTGGGGTTGCCTGCCAGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DGDRIASHCSSY*TSRFGVACQGC Trigger: GCAGCCCTGGCAGGCAACCCCAAAGCGGCTCGTGCAGTAGGAGGAGCAATGAGAAGCAATCCGGTCCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 72 bp | CAGGGTGATGGAGAGCAGGCAAGGGAAGCCCCTCTGTaGCTGCGGGTTCACGGAAATAGGCTTCCAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGDGEQAREAPL*LRVHGNRLPAR Trigger: CCTGGCTGGAAGCCTATTTCCGTGAACCCGCAGCCACAGAGGGGCTTCCCTTGCCTGCTCTCCATCACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS TCA 72 bp | TGGCACCGTCACTGCGAACCACCCTGTGGCAGGGGATaGGGATGGGGACCGGATTGCTTCTCATTGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WHRHCEPPCGRG*GWGPDCFSLLL Trigger: GAGGAGCAATGAGAAGCAATCCGGTCCCCATCCTCATCCCCTGCCACAGGGTGGTTCGCAGTGACGGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS GCA 72 bp | GTGATGGAGAGCAGGCAAGGGAAGCCCCTCTGTGGCTaGGGGTTCACGGAAATAGGCTTCCAGCCAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VMESRQGKPLCG*GFTEIGFQPGC Trigger: ACAGCCTGGCTGGAAGCCTATTTCCGTGAACCCGCAGCCACAGAGGGGCTTCCCTTGCCTGCTCTCCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS GCA 72 bp | GTGTTTGGGGTCTTCCCACTGAGCAACCGTATCCCATaGAGGCCTCGCTCACAGCCAGACAGCTCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VFGVFPLSNRIP*RPRSQPDSSIF Trigger: GAAGATGGAGCTGTCTGGCTGTGAGCGAGGCCTGCATGGGATACGGTTGCTCAGTGGGAAGACCCCAAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS GCA 72 bp | TCATTGCTCCTCCTACTGCACGAGCCGCTTTGGGGTTaGCTGCCAGGGCTGCTAATTGCTGGTAAGAAACCG | + |
|
Preference number: 6 (lower is better) Translates to: SLLLLLHEPLWG*LPGLLIAGKKP Trigger: CGGTTTCTTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCGGCTCGTGCAGTAGGAGGAGCAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS CCA 72 bp | TGCTTCTCATTGCTCCTCCTACTGCACGAGCCGCTTTaGGGTTGCCTGCCAGGGCTGCTAATTGCTGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: CFSLLLLLHEPL*GCLPGLLIAGK Trigger: CTTACCAGCAATTAGCAGCCCTGGCAGGCAACCCCAAAGCGGCTCGTGCAGTAGGAGGAGCAATGAGAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||
| CDS TCA 72 bp | TCACAACCTTCAGCAGCTTCCATAACACCTGTCTGGTaGATGAATCTTGCTGGAACACAGGGTGATGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SQPSAASITPVW*MNLAGTQGDGE Trigger: CTCTCCATCACCCTGTGTTCCAGCAAGATTCATTCACCAGACAGGTGTTATGGAAGCTGCTGAAGGTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081510.4 |
||