Pregenerated sensors for MGME1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027424Ensembl transcript IDs: ENSMUST00000028910.9, ENSMUST00000110027.2, ENSMUST00000110028.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAAGTCCCTGGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTaGGAAACAGCCAGAGGTCGTGCAGCTGGTGAGTCAGGCGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: QKSLGSCQSQCPPLR*ETARGRAAGESGAD Trigger: GTCAGCGCCTGACTCACCAGCTGCACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCCAGGGACTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR TCA 90 bp | CACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCCCCCGGAACTaGCCTCATAGACAATGTGAGCTGCCAGACATGGGTACTGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: HESSKGQKRCWVPRN*PHRQCELPDMGTGN Trigger: GTTCCCAGTACCCATGTCTGGCAGCTCACATTGTCTATGAGGTCAGTTCCGGGGGACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| 3UTR GCA 90 bp | GATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGTTTaGAAGGGAGCCCAGAAGTCCCTGGGCAGCTGCCAATCCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: DLNSKTGHPARDTEV*KGAQKSLGSCQSQC Trigger: ACACTGGGATTGGCAGCTGCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR GCA 90 bp | AGATACCCAAACCCTAGCGACGGTGACTTCCACACTCAGGCTTCCTaGTGCTGGGGCTTCTCTGGTAAGGAAAAGGACCTAGCCAATGAT | + |
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Preference number: 1 (lower is better) Translates to: RYPNPSDGDFHTQAS*CWGFSGKEKDLAND Trigger: ATCATTGGCTAGGTCCTTTTCCTTACCAGAGAAGCCCCAGCAGCAGGAAGCCTGAGTGTGGAAGTCACCGTCGCTAGGGTTTGGGTATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR TCA 90 bp | AGGGCCCCTCCCATCCCTGAGAACTCTAGGGACATGTGTGGCACATaGTGCTTCATTTGGCCTTCTGATCTCAATTCAAAGACTGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: RAPPIPENSRDMCGT*CFIWPSDLNSKTGH Trigger: ATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGGGAGGGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCCTCAGTGGACAGCAGTaGATCTCCCAAACAGAGATC | + |
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Preference number: 2 (lower is better) Translates to: GHPARDTEVCKGAQKSLGLSGQQ*ISQTEI Trigger: GATCTCTGTTTGGGAGATGCACTGCTGTCCACTGAG...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCTCTTTAGAAACTCAGTaGACAGCAGTGCATCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GHPARDTEVCKGAQKSLGSLETQ*TAVHLP Trigger: TGGGAGATGCACTGCTGTCCACTGAGTTTCTAAAGA...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCAGGGACACAGAGGTTTaGAAGGGAGCCCAGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLGNCGGDAYVLACSLSLRDTEV*KGAQKS Trigger: GGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCT...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTCTTTAGAAACTCAGTaGACAGCAGTGCATCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSSLETQ*TAVHLP Trigger: TGGGAGATGCACTGCTGTCCACTGAGTTTCTAAAGA...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTAAGTCCCTGGGCAGCTaGCAATCCCAGTGTCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PSLRTLGTCVAHDASFGLKSLGS*QSQCPP Trigger: AGGAGGACACTGGGATTGGCAGCTGCCCAGGGACTT...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCAAAGACTGGGCATCCTaGCAGGGACACAGAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLGNCGGDAYVLACSLSLKDWAS*QGHRGL Trigger: CAAACCTCTGTGTCCCTGGCAGGATGCCCAGTCTTT...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCCTCTCAATTCAAAGACTaGGCATCCTGCCAGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: VDVCLCTSPQKARRGAGSSQFKD*ASCQGH Trigger: GTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGA...GGACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCCTCAGTGGACAGCAGTaGATCTCCCAAACAGAGATC | + |
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Preference number: 2 (lower is better) Translates to: LLGNCGGDAYVLACSLSLLSGQQ*ISQTEI Trigger: GATCTCTGTTTGGGAGATGCACTGCTGTCCACTGAG...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTAGGGACACAGAGGTTTaGAAGGGAGCCCAGAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PSLRTLGTCVAHDASFGLRDTEV*KGAQKS Trigger: GGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCT...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGACATGGGTACTGGGAACAGAACTCTGGTCCACTGAAAGACTAGGAATCCTCAGTGGACAGCAGTaGATCTCCCAAACAGAGATC | + |
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Preference number: 2 (lower is better) Translates to: CQTWVLGTELWSTERLGILSGQQ*ISQTEI Trigger: GATCTCTGTTTGGGAGATGCACTGCTGTCCACTGAG...GATTCCTAGTCTTTCAGTGGACCAGAGTTCTGTTCCCAGTACCCATGTCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCTCAGAGAATACTGTAGAAGAGGCAGGAGAGAGTATTGTAGGAGCCATAAAGTCCCTGGGCAGCTaGCAATCCCAGTGTCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: FCSENTVEEAGESIVGAIKSLGS*QSQCPP Trigger: AGGAGGACACTGGGATTGGCAGCTGCCCAGGGACTT...TATGGCTCCTACAATACTCTCTCCTGCCTCTTCTACAGTATTCTCTGAGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| 3UTR-3UTR CCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTTCTTTAGAAACTCAGTaGACAGCAGTGCATCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PSLRTLGTCVAHDASFGLSLETQ*TAVHLP Trigger: TGGGAGATGCACTGCTGTCCACTGAGTTTCTAAAGA...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCTCAGAGAATACTGTAGAAGAGGCAGGAGAGAGTATTGTAGGAGCCATACAGGCTTCCTGCTGCTaGGGCTTCTCTGGTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FCSENTVEEAGESIVGAIQASCC*GFSGKE Trigger: TTCCTTACCAGAGAAGCCCCAGCAGCAGGAAGCCTG...TATGGCTCCTACAATACTCTCTCCTGCCTCTTCTACAGTATTCTCTGAGCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCTCAGAGAATACTGTAGAAGAGGCAGGAGAGAGTATTGTAGGAGCCATATTTGACCTAAGTCCCTaGATCTGTGTTAGGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: FCSENTVEEAGESIVGAIFDLSP*ICVRTG Trigger: CCCAGTCCTAACACAGATGCAGGGACTTAGGTCAAA...TATGGCTCCTACAATACTCTCTCCTGCCTCTTCTACAGTATTCTCTGAGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| 3UTR TCA 72 bp | CTGGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTaGGAAACAGCCAGAGGTCGTGCAGCTGGTGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LGSCQSQCPPLR*ETARGRAAGES Trigger: TGACTCACCAGCTGCACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR GCA 72 bp | CCTAGCGACGGTGACTTCCACACTCAGGCTTCCTGCTaGTGGGGCTTCTCTGGTAAGGAAAAGGACCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: PSDGDFHTQASC*WGFSGKEKDLA Trigger: GGCTAGGTCCTTTTCCTTACCAGAGAAGCCCCAGCAGCAGGAAGCCTGAGTGTGGAAGTCACCGTCGCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR GCA 72 bp | GGGTCCCCCGGAACTGACCTCATAGACAATGTGAGCTaGCAGACATGGGTACTGGGAACAGAACTCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GSPGTDLIDNVS*QTWVLGTELWS Trigger: GGACCAGAGTTCTGTTCCCAGTACCCATGTCTGGCAGCTCACATTGTCTATGAGGTCAGTTCCGGGGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| 3UTR TCA 72 bp | TCAAAAGGCCAGAAGAGGTGCTGGGTCCCCCGGAACTaGCCTCATAGACAATGTGAGCTGCCAGACATGGGT | + |
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Preference number: 3 (lower is better) Translates to: SKGQKRCWVPRN*PHRQCELPDMG Trigger: ACCCATGTCTGGCAGCTCACATTGTCTATGAGGTCAGTTCCGGGGGACCCAGCACCTCTTCTGGCCTTTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| 3UTR CCA 72 bp | GCCCTCAGTTCCCCGCATTCCTCTTTAGAAACTCAGTaGACAGCAGTGCATCTCCCAAACAGAGATCGCCGC | + |
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Preference number: 3 (lower is better) Translates to: ALSSPHSSLETQ*TAVHLPNRDRR Trigger: GCGGCGATCTCTGTTTGGGAGATGCACTGCTGTCCACTGAGTTTCTAAAGAGGAATGCGGGGAACTGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR CCA 72 bp | AGCGACGGTGACTTCCACACTCAGGCTTCCTGCTGCTaGGGCTTCTCTGGTAAGGAAAAGGACCTAGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SDGDFHTQASCC*GFSGKEKDLAN Trigger: ATTGGCTAGGTCCTTTTCCTTACCAGAGAAGCCCCAGCAGCAGGAAGCCTGAGTGTGGAAGTCACCGTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| 3UTR CCA 72 bp | CACAGAGTGTATAAAACACCTTCTAGGAAACTGTGGTaGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: HRVYKTPSRKLW*RCLRACLLTLS Trigger: AGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAGGTGTTTTATACACTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGTGGGACTCTGGCCTGTaGCTCCGGCTCTGCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGILPGTQRFAREPRSPWWDSGL*LRLCSL Trigger: AAGGCTGCAGAGCCGGAGCCACAGGCCAGAGTCCCA...CCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGAGTGTTGTGGGACTCTaGCCTGTGGCTCCGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSSVVGL*PVAPAL Trigger: CAGAGCCGGAGCCACAGGCCAGAGTCCCACAACACT...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR GCA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCTACTTCAAGGCCTCATaGTGGACGGCACTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GHPARDTEVCKGAQKSLGYFKAS*WTALSR Trigger: TCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAGTA...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CCA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCGGATGCGGGTCACACTaGGTATCGAGTTCCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: GHPARDTEVCKGAQKSLGGCGSH*VSSSFA Trigger: TGCAAAGGAACTCGATACCCAGTGTGACCCGCATCC...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR TCA 90 bp | ATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAGGTGGCATGGTCTGCTaGAGGATGCGGGTCACACTG | + |
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Preference number: 4 (lower is better) Translates to: IQRLGILPGTQRFAREPRGGMVC*RMRVTL Trigger: CAGTGTGACCCGCATCCTTCAGCAGACCATGCCACC...TCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAGTCTTTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR GCA 90 bp | CTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGGCTCTGCAGCCTTATaGTTACTCACTGGTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: LGILPGTQRFAREPRSPWGSAAL*LLTGPY Trigger: GTATGGACCAGTGAGTAAGCATAAGGCTGCAGAGCC...CCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR GCA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGTGGTCTGCTGAAGGATaGGGGTCACACTGGGTATCG | + |
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Preference number: 4 (lower is better) Translates to: AAANPSVLLSGEKQPEVVWSAEG*GSHWVS Trigger: CGATACCCAGTGTGACCCGCATCCTTCAGCAGACCA...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR GCA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCCCTGGGGTGACAGTATaGTTTCCAAGGCTTTATGGA | + |
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Preference number: 4 (lower is better) Translates to: GHPARDTEVCKGAQKSLGPGVTV*FPRLYG Trigger: TCCATAAAGCCTTGGAAAGCATACTGTCACCCCAGG...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTACTTCAAGGCCTCATaGTGGACGGCACTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSYFKAS*WTALSR Trigger: TCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAGTA...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CCA 90 bp | GTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCCAGTGTTGTGGGACTCTaGCCTGTGGCTCCGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VDVCLCTSPQKARRGAGSSVVGL*PVAPAL Trigger: CAGAGCCGGAGCCACAGGCCAGAGTCCCACAACACT...GGACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| CDS-3UTR CCA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGTCTGTTCAGGTGGCATaGTCTGCTGAAGGATGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AAANPSVLLSGEKQPEVVSVQVA*SAEGCG Trigger: CCCGCATCCTTCAGCAGACCATGCCACCTGAACAGA...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGGCACTCTCCAGAGCTTaGACACCACTGATTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSALSRA*TPLISV Trigger: GACAGAAATCAGTGGTGTGCAAGCTCTGGAGAGTGC...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CCA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCAGTGTTGTGGGACTCTaGCCTGTGGCTCCGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLGNCGGDAYVLACSLSLSVVGL*PVAPAL Trigger: CAGAGCCGGAGCCACAGGCCAGAGTCCCACAACACT...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGGAAGCTCTGTTCAGGTaGCATGGTCTGCTGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSEALFR*HGLLKD Trigger: ATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTC...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGCCTGGGGTGACAGTATaGTTTCCAAGGCTTTATGGA | + |
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Preference number: 4 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSPGVTV*FPRLYG Trigger: TCCATAAAGCCTTGGAAAGCATACTGTCACCCCAGG...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR GCA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCTCAGAATATGCTGGATaGTTTCGATGTAGCCACACT | + |
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Preference number: 4 (lower is better) Translates to: GHPARDTEVCKGAQKSLGSEYAG*FRCSHT Trigger: AGTGTGGCTACATCGAAAGCATCCAGCATATTCTGA...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTTGGGACTCTGGCCTGTaGCTCCGGCTCTGCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PSLRTLGTCVAHDASFGLWDSGL*LRLCSL Trigger: AAGGCTGCAGAGCCGGAGCCACAGGCCAGAGTCCCA...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CCA 90 bp | ATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGGAAAGCAGTGTTGTaGGACTCTGGCCTGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQRLGILPGTQRFAREPRRKAVL*DSGLWL Trigger: GAGCCACAGGCCAGAGTCCCACAACACTGCTTTCCT...TCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAGTCTTTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGCCTGTTAGGTTCTCCTaGGGTGACAGTATGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAANPSVLLSGEKQPEVVPVRFS*GDSMLS Trigger: GGAAAGCATACTGTCACCCCAGGAGAACCTAACAGG...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTGGTGGCATGGTCTGCTaGAGGATGCGGGTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTLGTCVAHDASFGLGGMVC*RMRVTL Trigger: CAGTGTGACCCGCATCCTTCAGCAGACCATGCCACC...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGAGAGCTCTTCATCCATaGAGTGAGGGTGCGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGLLISIQRLGILPGTQRRALHP*SEGAQG Trigger: CCCCTGCGCACCCTCACTTCATGGATGAAGAGCTCT...CCTCTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGTCCCTGGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGGGCTCTGCAGCCTTATaGTTACTCACTGGTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPWAAANPSVLLSGEKQGSAAL*LLTGPY Trigger: GTATGGACCAGTGAGTAAGCATAAGGCTGCAGAGCC...CTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCCAGGGACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCCTACTTCAAGGCCTCATaGTGGACGGCACTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDVCLCTSPQKARRGAGSYFKAS*WTALSR Trigger: TCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAGTA...GGACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR TCA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCAGGTTTTGGTTTTTCTaGTGTCTTCCAATCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHPARDTEVCKGAQKSLGRFWFF*CLPINH Trigger: GTGATTGATTGGAAGACATCAGAAAAACCAAAACCT...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGAGCTCTTCATCCATaGAGTGAGGGTGCGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLISIQRLGILPGTQRALHP*SEGAQG Trigger: CCCCTGCGCACCCTCACTTCATGGATGAAGAGCTCT...CTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCGCGCTCAGGTTCTTTTaGTTTTCTGTATATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHPARDTEVCKGAQKSLGALRFF*FSVYSS Trigger: AGAAGAATATACAGAAAAGCAAAAGAACCTGAGCGC...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAGAAGCTCTGTTCAGGTaGCATGGTCTGCTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IQRLGILPGTQRFAREPREALFR*HGLLKD Trigger: ATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTC...TCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAGTCTTTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGACTTGGCCCAATACTTaGAACAGAGCTCTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAANPSVLLSGEKQPEVVTWPNT*NRALHP Trigger: TGGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGT...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCCGTCGGAGAAGCCACTTaGCCCAATACTTGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDVCLCTSPQKARRGAGSVGEAT*PNTWNR Trigger: TCTGTTCCAAGTATTGGGCCAAGTGGCTTCTCCGAC...GGACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR CCA 90 bp | ATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAGTCGGAGAAGCCACTTaGCCCAATACTTGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IQRLGILPGTQRFAREPRVGEAT*PNTWNR Trigger: TCTGTTCCAAGTATTGGGCCAAGTGGCTTCTCCGAC...TCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAGTCTTTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGTCCCTGGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGGTACATCATCTTCCTTaGACAACGACTCTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPWAAANPSVLLSGEKQVHHLP*TTTLES Trigger: AGACTCCAGAGTCGTTGTTCAAGGAAGATGATGTAC...CTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCCAGGGACTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGAGGTTTTGGTTTTTCTaGTGTCTTCCAATCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGILPGTQRFAREPRSPWRFWFF*CLPINH Trigger: GTGATTGATTGGAAGACATCAGAAAAACCAAAACCT...CCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTTGGTCTGCTGAAGGATaGGGGTCACACTGGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTLGTCVAHDASFGLWSAEG*GSHWVS Trigger: CGATACCCAGTGTGACCCGCATCCTTCAGCAGACCA...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGACATGGGTACTGGGAACAGAACTCTGGTCCACTGAAAGACTAGGAATCAGGAAAGCAGTGTTGTaGGACTCTGGCCTGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CQTWVLGTELWSTERLGIRKAVL*DSGLWL Trigger: GAGCCACAGGCCAGAGTCCCACAACACTGCTTTCCT...GATTCCTAGTCTTTCAGTGGACCAGAGTTCTGTTCCCAGTACCCATGTCTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTAGGAAAGCAGTGTTGTaGGACTCTGGCCTGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTLGTCVAHDASFGLRKAVL*DSGLWL Trigger: GAGCCACAGGCCAGAGTCCCACAACACTGCTTTCCT...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGTCTGTTCAGGTGGCATaGTCTGCTGAAGGATGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLISIQRLGILPGTQSVQVA*SAEGCG Trigger: CCCGCATCCTTCAGCAGACCATGCCACCTGAACAGA...CTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTTCTGTTCAGGTGGCATaGTCTGCTGAAGGATGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTLGTCVAHDASFGLSVQVA*SAEGCG Trigger: CCCGCATCCTTCAGCAGACCATGCCACCTGAACAGA...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCGAAGCTCTGTTCAGGTaGCATGGTCTGCTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGNCGGDAYVLACSLSLEALFR*HGLLKD Trigger: ATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTC...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTGGCTCTGCAGCCTTATaGTTACTCACTGGTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: MWMYVCARVLKRPEEVLGGSAAL*LLTGPY Trigger: GTATGGACCAGTGAGTAAGCATAAGGCTGCAGAGCC...ACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGTCCCTGGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGTCAGAATATGCTGGATaGTTTCGATGTAGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: RSPWAAANPSVLLSGEKQSEYAG*FRCSHT Trigger: AGTGTGGCTACATCGAAAGCATCCAGCATATTCTGA...CTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCCAGGGACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTGCACTCTCCAGAGCTTaGACACCACTGATTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MWMYVCARVLKRPEEVLGALSRA*TPLISV Trigger: GACAGAAATCAGTGGTGTGCAAGCTCTGGAGAGTGC...ACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGCTTATGCTTACTCACTaGTCCATACAGTACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: AAANPSVLLSGEKQPEVVLMLTH*SIQYII Trigger: GATGATGTACTGTATGGACCAGTGAGTAAGCATAAG...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGACATGGGTACTGGGAACAGAACTCTGGTCCACTGAAAGACTAGGAATCGGATGCGGGTCACACTaGGTATCGAGTTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CQTWVLGTELWSTERLGIGCGSH*VSSSFA Trigger: TGCAAAGGAACTCGATACCCAGTGTGACCCGCATCC...GATTCCTAGTCTTTCAGTGGACCAGAGTTCTGTTCCCAGTACCCATGTCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGGGATGCGGGTCACACTaGGTATCGAGTTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLISIQRLGILPGTQGCGSH*VSSSFA Trigger: TGCAAAGGAACTCGATACCCAGTGTGACCCGCATCC...CTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCCACTTGGCCCAATACTTaGAACAGAGCTCTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VDVCLCTSPQKARRGAGSTWPNT*NRALHP Trigger: TGGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGT...GGACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR TCA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCGTACATCATCTTCCTTaGACAACGACTCTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGNCGGDAYVLACSLSLVHHLP*TTTLES Trigger: AGACTCCAGAGTCGTTGTTCAAGGAAGATGATGTAC...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGGCACTCTCCAGAGCTTaGACACCACTGATTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLISIQRLGILPGTQALSRA*TPLISV Trigger: GACAGAAATCAGTGGTGTGCAAGCTCTGGAGAGTGC...CTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGGCGCTCAGGTTCTTTTaGTTTTCTGTATATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAANPSVLLSGEKQPEVVALRFF*FSVYSS Trigger: AGAAGAATATACAGAAAAGCAAAAGAACCTGAGCGC...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCCCTGGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCTTATGCTTACTCACTaGTCCATACAGTACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: RSPWAAANPSVLLSGEKQLMLTH*SIQYII Trigger: GATGATGTACTGTATGGACCAGTGAGTAAGCATAAG...CTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCCAGGGACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGCTTTCCAAGGCTTTATaGAACTGTTTGCCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AAANPSVLLSGEKQPEVVLSKAL*NCLPCK Trigger: TTTACAAGGCAAACAGTTCCATAAAGCCTTGGAAAG...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTGTCGGAGAAGCCACTTaGCCCAATACTTGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTLGTCVAHDASFGLVGEAT*PNTWNR Trigger: TCTGTTCCAAGTATTGGGCCAAGTGGCTTCTCCGAC...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| 3UTR CAA 72 bp | TTTGCCTGCTTTTGGGACCCCTTTCCTCCTACTGGCTaGCTTCATATGAGGGAGGTGCCTAGTCTTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FACFWDPFPPTG*LHMREVPSLIA Trigger: TGCAATAAGACTAGGCACCTCCCTCATATGAAGCAAGCCAGTAGGAGGAAAGGGGTCCCAAAAGCAGGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR TCA 90 bp | TGCCAGACATGGGTACTGGGAACAGAACTCTGGTCCACTGAAAGACTAGGAATCGTACATCATCTTCCTTaGACAACGACTCTGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQTWVLGTELWSTERLGIVHHLP*TTTLES Trigger: AGACTCCAGAGTCGTTGTTCAAGGAAGATGATGTAC...GATTCCTAGTCTTTCAGTGGACCAGAGTTCTGTTCCCAGTACCCATGTCTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGTCAGAATATGCTGGATaGTTTCGATGTAGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: FGLLISIQRLGILPGTQRSEYAG*FRCSHT Trigger: AGTGTGGCTACATCGAAAGCATCCAGCATATTCTGA...CCTCTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTACTTGGCCCAATACTTaGAACAGAGCTCTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTLGTCVAHDASFGLTWPNT*NRALHP Trigger: TGGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGT...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCCTTTCCAAGGCTTTATaGAACTGTTTGCCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGNCGGDAYVLACSLSLLSKAL*NCLPCK Trigger: TTTACAAGGCAAACAGTTCCATAAAGCCTTGGAAAG...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGCTTATGCTTACTCACTaGTCCATACAGTACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLISIQRLGILPGTQLMLTH*SIQYII Trigger: GATGATGTACTGTATGGACCAGTGAGTAAGCATAAG...CTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCTTTCCAAGGCTTTATaGAACTGTTTGCCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MWMYVCARVLKRPEEVLGLSKAL*NCLPCK Trigger: TTTACAAGGCAAACAGTTCCATAAAGCCTTGGAAAG...ACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGTTTTGGTTTTTCTaGTGTCTTCCAATCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLISIQRLGILPGTQRFWFF*CLPINH Trigger: GTGATTGATTGGAAGACATCAGAAAAACCAAAACCT...CTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGCTCAGAGAATACTGTAGAAGAGGCAGGAGAGAGTATTGTAGGAGCCATAGCGCTCAGGTTCTTTTaGTTTTCTGTATATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCSENTVEEAGESIVGAIALRFF*FSVYSS Trigger: AGAAGAATATACAGAAAAGCAAAAGAACCTGAGCGC...TATGGCTCCTACAATACTCTCTCCTGCCTCTTCTACAGTATTCTCTGAGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR CAA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCCCGGTTCTCTCTTCATaGAAGATAGGAAAGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GHPARDTEVCKGAQKSLGPVLSS*KIGKQC Trigger: ACACTGCTTTCCTATCTTCAATGAAGAGAGAACCGG...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGGGTATCGAGTTCCTTaGCAAAGGGATCTTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGILPGTQRFAREPRSPWGYRVP*QRDLQR Trigger: CCTTTGAAGATCCCTTTGCAAAGGAACTCGATACCC...CCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CAA 90 bp | GGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGGCAACTCACAGGAGGGCTaGCTTTTACAGAAAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GHPARDTEVCKGAQKSLGNSQEG*LLQKIC Trigger: ACAGATTTTCTGTAAAAGCAAGCCCTCCTGTGAGTT...GCCCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGGGATCTTCAAAGGGCTaGAAGAAGCATCTGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSGSSKG*KKHLCV Trigger: CACACACAGATGCTTCTTCAAGCCCTTTGAAGATCC...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGGGGTATCGAGTTCCTTaGCAAAGGGATCTTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSGYRVP*QRDLQR Trigger: CCTTTGAAGATCCCTTTGCAAAGGAACTCGATACCC...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGCACTTGGCCCAATACTaGGAACAGAGCTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AAANPSVLLSGEKQPEVVHLAQY*EQSSSS Trigger: GGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGTG...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS TCA 90 bp | GGAGAAGCCACTTGGCCCAATACTTGGAACAGAGCTCTTCATCCATaGAGTGAGGGTGCGCAGGGGACCCATCCTTATAGGCCACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: GEATWPNTWNRALHP*SEGAQGTHPYRPPQ Trigger: TTGTGGTGGCCTATAAGGATGGGTCCCCTGCGCACCCTCACTTCATGGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGTGGCTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS GCA 90 bp | TACTCAGCCACACAGTCCAGCAGCCCTACATACTTCAAGGCCTCATaGTGGACGGCACTCTCCAGAGCTTGCACACCACTGATTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YSATQSSSPTYFKAS*WTALSRACTPLISV Trigger: GACAGAAATCAGTGGTGTGCAAGCTCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAGTATGTAGGGCTGCTGGACTGTGTGGCTGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS CCA 90 bp | TCAGCCACACAGTCCAGCAGCCCTACATACTTCAAGGCCTCATGCTaGACGGCACTCTCCAGAGCTTGCACACCACTGATTTCTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SATQSSSPTYFKASC*TALSRACTPLISVR Trigger: TCTGACAGAAATCAGTGGTGTGCAAGCTCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAGTATGTAGGGCTGCTGGACTGTGTGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGAAGTCCCTGGACAACTTGCAGCGGGTaGTCATATGTATTTCGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LGILPGTQRFAREPRSPWTTCSG*SYVFRI Trigger: AATTCGAAATACATATGACAACCCGCTGCAAGTTGT...CCAGGGACTTCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CAA 90 bp | GTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCCCACTTGGCCCAATACTaGGAACAGAGCTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VDVCLCTSPQKARRGAGSHLAQY*EQSSSS Trigger: GGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGTG...GGACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAAAGACTGGGCATCCTGCCAGGGACACAGAGGTTTGCAAGGGAGCCCAGACACTTGGCCCAATACTaGGAACAGAGCTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: IQRLGILPGTQRFAREPRHLAQY*EQSSSS Trigger: GGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGTG...TCTGGGCTCCCTTGCAAACCTCTGTGTCCCTGGCAGGATGCCCAGTCTTTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS TCA 90 bp | TTCCACCTCTCCAAAAAGAAGCTCTGTTCAGGTGGCATGGTCTGCTaGAGGATGCGGGTCACACTGGGTATCGAGTTCCTTTGCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FHLSKKKLCSGGMVC*RMRVTLGIEFLCKG Trigger: CCCTTTGCAAAGGAACTCGATACCCAGTGTGACCCGCATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTCTTTTTGGAGAGGTGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS GCA 90 bp | CAGTGTTGTGGGACTCTGGCCTGTGGCTCCGGCTCTGCAGCCTTATaGTTACTCACTGGTCCATACAGTACATCATCTTCCTTGAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: QCCGTLACGSGSAAL*LLTGPYSTSSSLNN Trigger: GTTGTTCAAGGAAGATGATGTACTGTATGGACCAGTGAGTAAGCATAAGGCTGCAGAGCCGGAGCCACAGGCCAGAGTCCCACAACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS CCA 90 bp | GGTCCATACAGTACATCATCTTCCTTGAACAACGACTCTGGAGTCTaGGCCGGGCCTCTGGACAAGACAGAGCGTACTAAACGAGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GPYSTSSSLNNDSGV*AGPLDKTERTKREY Trigger: GTACTCTCGTTTAGTACGCTCTGTCTTGTCCAGAGGCCCGGCCCAGACTCCAGAGTCGTTGTTCAAGGAAGATGATGTACTGTATGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS CCA 90 bp | AGCTCTGTTCAGGTGGCATGGTCTGCTGAAGGATGCGGGTCACACTaGGTATCGAGTTCCTTTGCAAAGGGATCTTCAAAGGGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVQVAWSAEGCGSH*VSSSFAKGSSKGLK Trigger: CTTCAAGCCCTTTGAAGATCCCTTTGCAAAGGAACTCGATACCCAGTGTGACCCGCATCCTTCAGCAGACCATGCCACCTGAACAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS CCA 90 bp | TCCGCTCTTTCCACCTCTCCAAAAAGAAGCTCTGTTCAGGTGGCATaGTCTGCTGAAGGATGCGGGTCACACTGGGTATCGAGTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SALSTSPKRSSVQVA*SAEGCGSHWVSSSF Trigger: AAAGGAACTCGATACCCAGTGTGACCCGCATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTCTTTTTGGAGAGGTGGAAAGAGCGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS CCA 90 bp | AACCATCCGCTCTTTCCACCTCTCCAAAAAGAAGCTCTGTTCAGGTaGCATGGTCTGCTGAAGGATGCGGGTCACACTGGGTATCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NHPLFPPLQKEALFR*HGLLKDAGHTGYRV Trigger: AACTCGATACCCAGTGTGACCCGCATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTCTTTTTGGAGAGGTGGAAAGAGCGGATGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGACAACTTGCAGCGGGTaGTCATATGTATTTCGAATT | + |
|
Preference number: 5 (lower is better) Translates to: GQLPIPVSSSQVRNSQRSTTCSG*SYVFRI Trigger: AATTCGAAATACATATGACAACCCGCTGCAAGTTGT...CGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS TCA 90 bp | TCAAGGCCTCATGCTGGACGGCACTCTCCAGAGCTTGCACACCACTaGTTTCTGTCAGAATATGCTGGATGCTTTCGATGTAGCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: SRPHAGRHSPELAHH*FLSEYAGCFRCSHT Trigger: AGTGTGGCTACATCGAAAGCATCCAGCATATTCTGACAGAAATCAGTGGTGTGCAAGCTCTGGAGAGTGCCGTCCAGCATGAGGCCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CAA 90 bp | GCAGCTGCCAATCCCAGTGTCCTCCTCTCAGGTGAGAAACAGCCAGAGGTCGTGAGCGCTCAGGTTCTTTaGCTTTTCTGTATATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAANPSVLLSGEKQPEVVSAQVL*LFCIFF Trigger: GAAGAATATACAGAAAAGCAAAAGAACCTGAGCGCT...CACGACCTCTGGCTGTTTCTCACCTGAGAGGAGGACACTGGGATTGGCAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS GCA 90 bp | TCTCCAAAAAGAAGCTCTGTTCAGGTGGCATGGTCTGCTGAAGGATaGGGGTCACACTGGGTATCGAGTTCCTTTGCAAAGGGATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPKRSSVQVAWSAEG*GSHWVSSSFAKGSS Trigger: TGAAGATCCCTTTGCAAAGGAACTCGATACCCAGTGTGACCCGCATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTCTTTTTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CAA 90 bp | GTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTCCAACTCACAGGAGGGCTaGCTTTTACAGAAAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VDVCLCTSPQKARRGAGSNSQEG*LLQKIC Trigger: ACAGATTTTCTGTAAAAGCAAGCCCTCCTGTGAGTT...GGACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCCCGGTTCTCTCTTCATaGAAGATAGGAAAGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGNCGGDAYVLACSLSLPVLSS*KIGKQC Trigger: ACACTGCTTTCCTATCTTCAATGAAGAGAGAACCGG...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CAA 90 bp | ATGTGGATGTATGTCTGTGCACGAGTCCTCAAAAGGCCAGAAGAGGTGCTGGGTGGATCTTCAAAGGGCTaGAAGAAGCATCTGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MWMYVCARVLKRPEEVLGGSSKG*KKHLCV Trigger: CACACACAGATGCTTCTTCAAGCCCTTTGAAGATCC...ACCCAGCACCTCTTCTGGCCTTTTGAGGACTCGTGCACAGACATACATCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCAACTCACAGGAGGGCTaGCTTTTACAGAAAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGNCGGDAYVLACSLSLNSQEG*LLQKIC Trigger: ACAGATTTTCTGTAAAAGCAAGCCCTCCTGTGAGTT...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CAA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTGGATCTTCAAAGGGCTaGAAGAAGCATCTGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSLRTLGTCVAHDASFGLGSSKG*KKHLCV Trigger: CACACACAGATGCTTCTTCAAGCCCTTTGAAGATCC...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CAA 90 bp | TCATTTGGCCTTCTGATCTCAATTCAAAGACTGGGCATCCTGCCAGGGACACAGGGGTATCGAGTTCCTTaGCAAAGGGATCTTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFGLLISIQRLGILPGTQGYRVP*QRDLQR Trigger: CCTTTGAAGATCCCTTTGCAAAGGAACTCGATACCC...CTGTGTCCCTGGCAGGATGCCCAGTCTTTGAATTGAGATCAGAAGGCCAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CAA 90 bp | CTTCTAGGAAACTGTGGTGGCGATGCCTACGTGCTTGCTTGCTCACTCTCTCTCAGCGCTCAGGTTCTTTaGCTTTTCTGTATATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGNCGGDAYVLACSLSLSAQVL*LFCIFF Trigger: GAAGAATATACAGAAAAGCAAAAGAACCTGAGCGCT...GAGAGAGAGTGAGCAAGCAAGCACGTAGGCATCGCCACCACAGTTTCCTAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS TCA 90 bp | CACACTGGGTATCGAGTTCCTTTGCAAAGGGATCTTCAAAGGGCTTaGAGAAGCATCTGTGTGTGGTTTCCCGGTTCTCTCTTCATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HTGYRVPLQRDLQRA*RSICVWFPGSLFIE Trigger: TTCAATGAAGAGAGAACCGGGAAACCACACACAGATGCTTCTTCAAGCCCTTTGAAGATCCCTTTGCAAAGGAACTCGATACCCAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS-3UTR CAA 90 bp | CCATCCCTGAGAACTCTAGGGACATGTGTGGCACATGATGCTTCATTTGGCCTTACAACTTGCAGCGGGTaGTCATATGTATTTCGAATT | + |
|
Preference number: 5 (lower is better) Translates to: PSLRTLGTCVAHDASFGLTTCSG*SYVFRI Trigger: AATTCGAAATACATATGACAACCCGCTGCAAGTTGT...AAGGCCAAATGAAGCATCATGTGCCACACATGTCCCTAGAGTTCTCAGGGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGACATGGGTACTGGGAACAGAACTCTGGTCCACTGAAAGACTAGGAATCAGCGCTCAGGTTCTTTaGCTTTTCTGTATATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CQTWVLGTELWSTERLGISAQVL*LFCIFF Trigger: GAAGAATATACAGAAAAGCAAAAGAACCTGAGCGCT...GATTCCTAGTCTTTCAGTGGACCAGAGTTCTGTTCCCAGTACCCATGTCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028910.9 |
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| CDS GCA 90 bp | TCTCCTGGGGTGACAGTATGCTTTCCAAGGCTTTATGGAACTGTTTaGCTTGTAAAAACACATTTGAAGTATATTCTGCAAACCCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SPGVTVCFPRLYGTV*LVKTHLKYILQTRL Trigger: AAGACGGGTTTGCAGAATATACTTCAAATGTGTTTTTACAAGGCAAACAGTTCCATAAAGCCTTGGAAAGCATACTGTCACCCCAGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS GCA 72 bp | GCAGTGTTGTGGGACTCTGGCCTGTGGCTCCGGCTCTaGAGCCTTATGCTTACTCACTGGTCCATACAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AVLWDSGLWLRL*SLMLTHWSIQY Trigger: GTACTGTATGGACCAGTGAGTAAGCATAAGGCTGCAGAGCCGGAGCCACAGGCCAGAGTCCCACAACACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS GCA 72 bp | ACACAGTCCAGCAGCCCTACATACTTCAAGGCCTCATaGTGGACGGCACTCTCCAGAGCTTGCACACCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TQSSSPTYFKAS*WTALSRACTPL Trigger: CAGTGGTGTGCAAGCTCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAGTATGTAGGGCTGCTGGACTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS CAA 72 bp | CCCGGTTCTCTCTTCATTGAAGATAGGAAAGCAGTGTaGTGGGACTCTGGCCTGTGGCTCCGGCTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGSLFIEDRKAV*WDSGLWLRLCS Trigger: GCTGCAGAGCCGGAGCCACAGGCCAGAGTCCCACAACACTGCTTTCCTATCTTCAATGAAGAGAGAACCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS GCA 72 bp | GGGACTCTGGCCTGTGGCTCCGGCTCTGCAGCCTTATaGTTACTCACTGGTCCATACAGTACATCATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTLACGSGSAAL*LLTGPYSTSSS Trigger: GGAAGATGATGTACTGTATGGACCAGTGAGTAAGCATAAGGCTGCAGAGCCGGAGCCACAGGCCAGAGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS CCA 72 bp | CAGTCCAGCAGCCCTACATACTTCAAGGCCTCATGCTaGACGGCACTCTCCAGAGCTTGCACACCACTGATT | + |
|
Preference number: 6 (lower is better) Translates to: QSSSPTYFKASC*TALSRACTPLI Trigger: AATCAGTGGTGTGCAAGCTCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAGTATGTAGGGCTGCTGGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS CCA 72 bp | TCCATACAGTACATCATCTTCCTTGAACAACGACTCTaGAGTCTGGGCCGGGCCTCTGGACAAGACAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SIQYIIFLEQRL*SLGRASGQDRA Trigger: CGCTCTGTCTTGTCCAGAGGCCCGGCCCAGACTCCAGAGTCGTTGTTCAAGGAAGATGATGTACTGTATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS CAA 90 bp | GTGTGGTTTCCCGGTTCTCTCTTCATTGAAGATAGGAAAGCAGTGTaGTGGGACTCTGGCCTGTGGCTCCGGCTCTGCAGCCTTATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VWFPGSLFIEDRKAV*WDSGLWLRLCSLML Trigger: AAGCATAAGGCTGCAGAGCCGGAGCCACAGGCCAGAGTCCCACAACACTGCTTTCCTATCTTCAATGAAGAGAGAACCGGGAAACCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS TCA 72 bp | ACTTGGCCCAATACTTGGAACAGAGCTCTTCATCCATaGAGTGAGGGTGCGCAGGGGACCCATCCTTATAGG | + |
|
Preference number: 6 (lower is better) Translates to: TWPNTWNRALHP*SEGAQGTHPYR Trigger: CCTATAAGGATGGGTCCCCTGCGCACCCTCACTTCATGGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS GCA 72 bp | AGAAGCTCTGTTCAGGTGGCATGGTCTGCTGAAGGATaGGGGTCACACTGGGTATCGAGTTCCTTTGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RSSVQVAWSAEG*GSHWVSSSFAK Trigger: CTTTGCAAAGGAACTCGATACCCAGTGTGACCCGCATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
||
| CDS CAA 90 bp | GGGCTTGAAGAAGCATCTGTGTGTGGTTTCCCGGTTCTCTCTTCATaGAAGATAGGAAAGCAGTGTTGTGGGACTCTGGCCTGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GLEEASVCGFPVLSS*KIGKQCCGTLACGS Trigger: GGAGCCACAGGCCAGAGTCCCACAACACTGCTTTCCTATCTTCAATGAAGAGAGAACCGGGAAACCACACACAGATGCTTCTTCAAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS TCA 72 bp | TCCAAAAAGAAGCTCTGTTCAGGTGGCATGGTCTGCTaGAGGATGCGGGTCACACTGGGTATCGAGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SKKKLCSGGMVC*RMRVTLGIEFL Trigger: AAGGAACTCGATACCCAGTGTGACCCGCATCCTTCAGCAGACCATGCCACCTGAACAGAGCTTCTTTTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS CCA 72 bp | AGTACATCATCTTCCTTGAACAACGACTCTGGAGTCTaGGCCGGGCCTCTGGACAAGACAGAGCGTACTAAA | + |
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Preference number: 6 (lower is better) Translates to: STSSSLNNDSGV*AGPLDKTERTK Trigger: TTTAGTACGCTCTGTCTTGTCCAGAGGCCCGGCCCAGACTCCAGAGTCGTTGTTCAAGGAAGATGATGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS CAA 72 bp | CTTCAAGGCCTCATGCTGGACGGCACTCTCCAGAGCTaGCACACCACTGATTTCTGTCAGAATATGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LQGLMLDGTLQS*HTTDFCQNMLD Trigger: ATCCAGCATATTCTGACAGAAATCAGTGGTGTGCAAGCTCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS CAA 90 bp | CCCTACATACTTCAAGGCCTCATGCTGGACGGCACTCTCCAGAGCTaGCACACCACTGATTTCTGTCAGAATATGCTGGATGCTTTCGAT | + |
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Preference number: 6 (lower is better) Translates to: PYILQGLMLDGTLQS*HTTDFCQNMLDAFD Trigger: ATCGAAAGCATCCAGCATATTCTGACAGAAATCAGTGGTGTGCAAGCTCTGGAGAGTGCCGTCCAGCATGAGGCCTTGAAGTATGTAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS CAA 72 bp | GAAGCATCTGTGTGTGGTTTCCCGGTTCTCTCTTCATaGAAGATAGGAAAGCAGTGTTGTGGGACTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: EASVCGFPVLSS*KIGKQCCGTLA Trigger: GGCCAGAGTCCCACAACACTGCTTTCCTATCTTCAATGAAGAGAGAACCGGGAAACCACACACAGATGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS GCA 72 bp | CTTCTCCCCCTGTTAGGTTCTCCTGGGGTGACAGTATaGTTTCCAAGGCTTTATGGAACTGTTTGCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LLPLLGSPGVTV*FPRLYGTVCLV Trigger: TACAAGGCAAACAGTTCCATAAAGCCTTGGAAAGCATACTGTCACCCCAGGAGAACCTAACAGGGGGAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS TCA 72 bp | TATCGAGTTCCTTTGCAAAGGGATCTTCAAAGGGCTTaGAGAAGCATCTGTGTGTGGTTTCCCGGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: YRVPLQRDLQRA*RSICVWFPGSL Trigger: GAGAGAACCGGGAAACCACACACAGATGCTTCTTCAAGCCCTTTGAAGATCCCTTTGCAAAGGAACTCGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS GCA 72 bp | GCATCATGGTTTACGGCACCCATGTACGCCACAACTTaGAGCGGGTTGTCATATGTATTTCGAATTAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: ASWFTAPMYATT*SGLSYVFRIKG Trigger: ACCTTTAATTCGAAATACATATGACAACCCGCTGCAAGTTGTGGCGTACATGGGTGCCGTAAACCATGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS CAA 72 bp | TGCTTTTCTGTATATTCTTCTAGTCGGAGAAGCCACTaGGCCCAATACTTGGAACAGAGCTCTTCATCCATG | + |
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Preference number: 6 (lower is better) Translates to: CFSVYSSSRRSH*AQYLEQSSSSM Trigger: CATGGATGAAGAGCTCTGTTCCAAGTATTGGGCCAAGTGGCTTCTCCGACTAGAAGAATATACAGAAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS CAA 90 bp | TTCTCCTGGGGTGACAGTATGCTTTCCAAGGCTTTATGGAACTGTTaGCCTTGTAAAAACACATTTGAAGTATATTCTGCAAACCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: FSWGDSMLSKALWNC*PCKNTFEVYSANPS Trigger: AGACGGGTTTGCAGAATATACTTCAAATGTGTTTTTACAAGGCAAACAGTTCCATAAAGCCTTGGAAAGCATACTGTCACCCCAGGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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| CDS GCA 72 bp | GTGACAGTATGCTTTCCAAGGCTTTATGGAACTGTTTaGCTTGTAAAAACACATTTGAAGTATATTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VTVCFPRLYGTV*LVKTHLKYILQ Trigger: TTGCAGAATATACTTCAAATGTGTTTTTACAAGGCAAACAGTTCCATAAAGCCTTGGAAAGCATACTGTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028910.9 ENSMUST00000110027.2 ENSMUST00000110028.8 |
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