Pregenerated sensors for MGLL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033174Ensembl transcript IDs: ENSMUST00000089449.5, ENSMUST00000113581.8, ENSMUST00000113582.8, ENSMUST00000113585.9, ENSMUST00000150180.4, ENSMUST00000163271.8, ENSMUST00000203608.3, ENSMUST00000203824.2
Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCTTGGGTTTCACTGCTTCAGGGGAGCCTCTCTGAGGCCTGGCTaGGCCATCCTGCTGCAGTCTGGCATGGGGTGCAGACAGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: GLGFHCFRGASLRPG*AILLQSGMGCRQLW Trigger: CCACAGCTGTCTGCACCCCATGCCAGACTGCAGCAGGATGGCCCAGCCAGGCCTCAGAGAGGCTCCCCTGAAGCAGTGAAACCCAAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR TCA 90 bp | GGCATGGGGTGCAGACAGCTGTGGTCCTTGTCTGCCGGTAGTCATTaGAGTGCTCTGTGCTGCCCCTGGCAGGCAGCCAGCACCGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: GMGCRQLWSLSAGSH*SALCCPWQAASTVV Trigger: CACCACGGTGCTGGCTGCCTGCCAGGGGCAGCACAGAGCACTTCAATGACTACCGGCAGACAAGGACCACAGCTGTCTGCACCCCATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR GCA 90 bp | AGAGCTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTaGATGCAGTGCTTGGGCCCTGTTGAGGGGCACAGTGACCTTATG | + |
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Preference number: 1 (lower is better) Translates to: RAKRGLWTAPGPFLP*MQCLGPVEGHSDLM Trigger: CATAAGGTCACTGTGCCCCTCAACAGGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR CCA 90 bp | GGCTCCCCTCCTTCACCCGGGGGAGGACCATCGGCGGTTTCTTGCTaGCTTCCACCTTCTTCAGGCCGAGCCTTGTGTGTCCTAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: GSPPSPGGGPSAVSC*LPPSSGRALCVLAF Trigger: AAATGCTAGGACACACAAGGCTCGGCCTGAAGAAGGTGGAAGCCAGCAAGAAACCGCCGATGGTCCTCCCCCGGGTGAAGGAGGGGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR CCA 90 bp | CTAGGATGGAGATGGCACCGCCCATGGAGTGGCCCAGGAGGAAGATaGGGACGTCGGGGTAGTCCTTCTGGATGGTGTCCACGTGTTGCA | + |
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Preference number: 1 (lower is better) Translates to: LGWRWHRPWSGPGGR*GRRGSPSGWCPRVA Trigger: TGCAACACGTGGACACCATCCAGAAGGACTACCCCGACGTCCCCATCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCTCCATCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR CCA 90 bp | TGCCAGAAAAGTAGGTTGGCCTCTCTGCAGCCACTAGGATGGAGATaGCACCGCCCATGGAGTGGCCCAGGAGGAAGATGGGGACGTCGG | + |
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Preference number: 1 (lower is better) Translates to: CQKSRLASLQPLGWR*HRPWSGPGGRWGRR Trigger: CCGACGTCCCCATCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAGAGAGGCCAACCTACTTTTCTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR GCA 90 bp | AGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTaGTTGGGCCCTGTTGAGGGGCACAGTGACCTTATGACCTATAGT | + |
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Preference number: 1 (lower is better) Translates to: RGLWTAPGPFLPCMQ*LGPVEGHSDLMTYS Trigger: ACTATAGGTCATAAGGTCACTGTGCCCCTCAACAGGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR GCA 90 bp | TGGGCATTGCTCGCTCCACTCTTGCGACGGCATTCAGCAGCTGTATaGCAAAGCACACCTTCAGCCCTGCTCGGCAGACGAGTGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: WALLAPLLRRHSAAV*QSTPSALLGRRVGQ Trigger: CTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR CCA 90 bp | GGACCATGCCAGAAAAGTAGGTTGGCCTCTCTGCAGCCACTAGGATaGAGATGGCACCGCCCATGGAGTGGCCCAGGAGGAAGATGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GPCQKSRLASLQPLG*RWHRPWSGPGGRWG Trigger: TCCCCATCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAGAGAGGCCAACCTACTTTTCTGGCATGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR GCA 90 bp | CAGCAGGAATGGCAGTGTCAGCCTGGGCATTGCTCGCTCCACTCTTaGGACGGCATTCAGCAGCTGTATGCCAAAGCACACCTTCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: QQEWQCQPGHCSLHS*DGIQQLYAKAHLQP Trigger: GGGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCAGGCTGACACTGCCATTCCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR GCA 90 bp | TGCGACGGCATTCAGCAGCTGTATGCCAAAGCACACCTTCAGCCCTaGTCGGCAGACGAGTGGGTCAGAGTTGTACAGGTCAACCTCCGA | + |
|
Preference number: 1 (lower is better) Translates to: CDGIQQLYAKAHLQP*SADEWVRVVQVNLR Trigger: TCGGAGGTTGACCTGTACAACTCTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR GCA 90 bp | GAGCTGGTTGCCTGGCCAGCATGTTCAGGGTGGACACCCAGCTCCTaGTGCTGCTATCCTGTGAGACACCCACGAGTTTACTTCATGGAG | + |
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Preference number: 1 (lower is better) Translates to: ELVAWPACSGWTPSS*CCYPVRHPRVYFME Trigger: CTCCATGAAGTAAACTCGTGGGTGTCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCACCCTGAACATGCTGGCCAGGCAACCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
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| 3UTR CCA 90 bp | TGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGGGAGTGCTaGCTGCCCCTCTTCCCACACTCTTTCTGTCTTCATTTTCTAAAC | + |
|
Preference number: 1 (lower is better) Translates to: CPSTAVQGSLSRREC*LPLFPHSFCLHFLN Trigger: GTTTAGAAAATGAAGACAGAAAGAGTGTGGGAAGAGGGGCAGCCAGCACTCCCTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR CCA 90 bp | CAGCTGTATGCCAAAGCACACCTTCAGCCCTGCTCGGCAGACGAGTaGGTCAGAGTTGTACAGGTCAACCTCCGACTTGTTCCGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: QLYAKAHLQPCSADE*VRVVQVNLRLVPRQ Trigger: CTGTCTCGGAACAAGTCGGAGGTTGACCTGTACAACTCTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGCTTTGGCATACAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR TCA 90 bp | GGACAGCCAGTCAGAGAGGACTTGGTTCAGGAGGAAAGAGACCTCTaGTTATTGCAGACTGGGATCTGGGACTGCCAGAGAGTCCCCGAA | + |
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Preference number: 1 (lower is better) Translates to: GQPVREDLVQEERDL*LLQTGIWDCQRVPE Trigger: TTCGGGGACTCTCTGGCAGTCCCAGATCCCAGTCTGCAATAATCAGAGGTCTCTTTCCTCCTGAACCAAGTCCTCTCTGACTGGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR TCA 90 bp | AACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGGAGAGCAGTaGGTGCTCCAAGAGAGCAGTGAGCCCCAGTTATTGCTGGCGCTA | + |
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Preference number: 1 (lower is better) Translates to: NSKALRKDRSAPGEQ*VLQESSEPQLLLAL Trigger: TAGCGCCAGCAATAACTGGGGCTCACTGCTCTCTTGGAGCACTCACTGCTCTCCTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR TCA 90 bp | GACCTTCAAAGTCGATGCAGATTCCGGATTGGCAAGGACCAGAGGTaGAATCAGGACCATGCCAGAAAAGTAGGTTGGCCTCTCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: DLQSRCRFRIGKDQR*NQDHARKVGWPLCS Trigger: GCTGCAGAGAGGCCAACCTACTTTTCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR GCA 90 bp | ATGCAGATTCCGGATTGGCAAGGACCAGAGGTGAAATCAGGACCATaGCAGAAAAGTAGGTTGGCCTCTCTGCAGCCACTAGGATGGAGA | + |
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Preference number: 1 (lower is better) Translates to: MQIPDWQGPEVKSGP*QKSRLASLQPLGWR Trigger: TCTCCATCCTAGTGGCTGCAGAGAGGCCAACCTACTTTTCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCCAATCCGGAATCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR CCA 90 bp | TGGTTTGGAAAAGTGGCATTGTCAGTGTGCTTTTGGGAGCAGCCTTaGGTGGCTCCTGGTGAGAGTCACAGATCTGAGCACAGTAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: WFGKVALSVCFWEQP*VAPGESHRSEHSSL Trigger: CAGACTACTGTGCTCAGATCTGTGACTCTCACCAGGAGCCACCCAAGGCTGCTCCCAAAAGCACACTGACAATGCCACTTTTCCAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR TCA 90 bp | CGCTGGAGTCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATTaGGCAGTTTGGCAGCAAGGACCTTCAAAGTCGATGCAGATTCCG | + |
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Preference number: 1 (lower is better) Translates to: RWSQCAPRSYLAGQN*AVWQQGPSKSMQIP Trigger: CGGAATCTGCATCGACTTTGAAGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR CCA 90 bp | AGGCCACCTCATCATATGCCAGAGGACAGCCAGTCAGAGAGGACTTaGTTCAGGAGGAAAGAGACCTCTGATTATTGCAGACTGGGATCT | + |
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Preference number: 1 (lower is better) Translates to: RPPHHMPEDSQSERT*FRRKETSDYCRLGS Trigger: AGATCCCAGTCTGCAATAATCAGAGGTCTCTTTCCTCCTGAACCAAGTCCTCTCTGACTGGCTGTCCTCTGGCATATGATGAGGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR CCA 90 bp | TTGGAAAAGTGGCATTGTCAGTGTGCTTTTGGGAGCAGCCTTGGGTaGCTCCTGGTGAGAGTCACAGATCTGAGCACAGTAGTCTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: LEKWHCQCAFGSSLG*LLVRVTDLSTVVWN Trigger: ATTCCAGACTACTGTGCTCAGATCTGTGACTCTCACCAGGAGCCACCCAAGGCTGCTCCCAAAAGCACACTGACAATGCCACTTTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR CCA 90 bp | GTTCCGAGACAGCACGCTGGAGTCAATGCGCCCCAAGGTCATATTTaGCAGGACAAAATTGAGCAGTTTGGCAGCAAGGACCTTCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: VPRQHAGVNAPQGHI*QDKIEQFGSKDLQS Trigger: ACTTTGAAGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCGTGCTGTCTCGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTCAGGGGAGCCTCTCTaGGGCCTGGCTGGGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: LRGGSGQLLGPSFPACSASGEPL*GLAGPS Trigger: GGATGGCCCAGCCAGGCCTCAGAGAGGCTCCCCTGA...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACACTGGGATCTGGGACTaGCAGAGAGTCCCCGAACCC | + |
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Preference number: 2 (lower is better) Translates to: PQLLLALSEAWGRPSGGHTGIWD*QRVPEP Trigger: GGGTTCGGGGACTCTCTGGCAGTCCCAGATCCCAGT...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCAGAGGACAGGGGGCTTaGGTTTCACTGCTTCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GALDSSWALPSLHAVLGPRGQGA*VSLLQG Trigger: CCCCTGAAGCAGTGAAACCCAAGCCCCCTGTCCTCT...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACCCTGTGTGGGGGTACTaGTTCCTCCAAAGCCGCCTA | + |
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Preference number: 2 (lower is better) Translates to: PQLLLALSEAWGRPSGGHPVWGY*FLQSRL Trigger: TAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGG...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGATCCCACCTTCCTaGAGGCCCACCCACCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LRGGSGQLLGPSFPACSAWIPPS*RPTHPF Trigger: GAAGGGGTGGGTGGGCCTCCAGGAAGGTGGGATCCA...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR CAA 90 bp | TTCCTGGAGGCCCACCCACCCCTTCCAGCAGCCAGGCAGCTCTCCTaGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCATCGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: FLEAHPPLPAARQLS*AAVPLSRVLHASTG Trigger: TCCTGTCGATGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGGAAGGGGTGGGTGGGCCTCCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCAATTGCTGGCGCTAAGTaGGGCCTGGGGGAGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: AARQLSLAAVPLSRVLHAIAGAK*GLGEAF Trigger: GAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAAT...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTACTGGGATCTGGGACTaGCAGAGAGTCCCCGAACCC | + |
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Preference number: 2 (lower is better) Translates to: LRGGSGQLLGPSFPACSATGIWD*QRVPEP Trigger: GGGTTCGGGGACTCTCTGGCAGTCCCAGATCCCAGT...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTCCCATGCCCGTCCACTaGTGTCCAGGGTTCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: AGCEQSTPPMLTWWREAVPMPVH*CPGFPE Trigger: CTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGG...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTAGGGGGCTGGGTCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCTTGCAGACTGGGATCTaGGACTGCCAGAGAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QLGGWVLGRPTLCGGTGSLQTGI*DCQRVP Trigger: GGGGACTCTCTGGCAGTCCCAGATCCCAGTCTGCAA...GGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGACCCAGCCCCCTAATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACTCCCTTCCCCCAGCCTaGCTTCCATCTGAAAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: PQLLLALSEAWGRPSGGHSLPPA*LPSEKS Trigger: CGACTTTTCAGATGGAAGCCAGGCTGGGGGAAGGGA...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACAGGAGCTGGGAGAGGTaGGCAATGCTGCTTTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PQLLLALSEAWGRPSGGHRSWER*AMLLCF Trigger: AAAGCAAAGCAGCATTGCCCACCTCTCCCAGCTCCT...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTGAACCCCACAGGAGCTaGGAGAGGTGGGCAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: AGCEQSTPPMLTWWREAVEPHRS*ERWAML Trigger: CAGCATTGCCCACCTCTCCCAGCTCCTGTGGGGTTC...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTTTACGAACCCCACAGGAGCTaGGAGAGGTGGGCAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: ADRPCVGVLVPPKPPRLYEPHRS*ERWAML Trigger: CAGCATTGCCCACCTCTCCCAGCTCCTGTGGGGTTC...GTAAAGCCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | CGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTTTACCCACCCTTGCAGACTGGGATCTaGGACTGCCAGAGAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RPCVGVLVPPKPPRLYPPLQTGI*DCQRVP Trigger: GGGGACTCTCTGGCAGTCCCAGATCCCAGTCTGCAA...GGGTGGGTAAAGCCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGTCCCTTCCCCCAGCCTaGCTTCCATCTGAAAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: SSADRPCVGVLVPPKPPRSLPPA*LPSEKS Trigger: CGACTTTTCAGATGGAAGCCAGGCTGGGGGAAGGGA...CCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTGCTCTGGACAGCTCCTaGGCCCTTCCTTCCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: AGCEQSTPPMLTWWREAVALDSS*ALPSLH Trigger: ATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGC...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTTGTTCTTGCGGGTTCTaGCTCCCCTCCTTCACCCGG | + |
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Preference number: 2 (lower is better) Translates to: AGCEQSTPPMLTWWREAVCSCGF*LPSFTR Trigger: CCGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACA...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGTGTCAGCCTGGGCATTGCTCGCTCCACTCTTGCGACGGCATTCAGCAGAGATGGCACCGCCCATaGAGTGGCCCAGGAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: WQCQPGHCSLHSCDGIQQRWHRP*SGPGGR Trigger: TCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCT...CTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCAGGCTGACACTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| 3UTR CAA 90 bp | GGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTaGGGCCCTGTTGAGGGGCACAGTGACCTTATGACCTATAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLWTAPGPFLPCMQC*GPVEGHSDLMTYSR Trigger: CCTACTATAGGTCATAAGGTCACTGTGCCCCTCAACAGGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCAGCTCCAAGAGAGCAGTaGGCCCCAGTTATTGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: AARQLSLAAVPLSRVLHAAPREQ*APVIAG Trigger: GCCAGCAATAACTGGGGCTCACTGCTCTCTTGGAGC...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTCTCCTTGGCAGCAGTaGCCCTTTCCAGGGTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: LRGGSGQLLGPSFPACSASPWQQ*PFPGFY Trigger: GTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGA...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAGCCTGGGCATTGCTCGCTCCACTCTTGCGACGGCATTCAGCAGCTGTATGCACACCTTCAGCCCTaGTCGGCAGACGAGTGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CQPGHCSLHSCDGIQQLYAHLQP*SADEWV Trigger: GACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGC...ATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCAGGCTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACCAGTCAGAGAGGACTTaGTTCAGGAGGAAAGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: PQLLLALSEAWGRPSGGHQSERT*FRRKET Trigger: GGTCTCTTTCCTCCTGAACCAAGTCCTCTCTGACTG...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATAGAGGACAGGGGGCTTaGGTTTCACTGCTTCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PAARQLSLAAVPLSRVLHRGQGA*VSLLQG Trigger: CCCCTGAAGCAGTGAAACCCAAGCCCCCTGTCCTCT...ATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGGGGAGCAGCCTTGGGTaGCTCCTGGTGAGAGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: EKPTDALFLRVLAPLLHPGSSLG*LLVRVT Trigger: TGTGACTCTCACCAGGAGCCACCCAAGGCTGCTCCC...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCTGCAGCCACTAGGATGGAGATGGCACCGCCCATGGAGTGGCCCAGGAGGGGTAGTCCTTCTGGATaGTGTCCACGTGTTGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSAATRMEMAPPMEWPRRGSPSG*CPRVAA Trigger: TGCTGCAACACGTGGACACCATCCAGAAGGACTACC...CCTCCTGGGCCACTCCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR CAA 90 bp | GCAGCAGGAATGGCAGTGTCAGCCTGGGCATTGCTCGCTCCACTCTaGCGACGGCATTCAGCAGCTGTATGCCAAAGCACACCTTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: AAGMAVSAWALLAPL*RRHSAAVCQSTPSA Trigger: GGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCAGGCTGACACTGCCATTCCTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGGGTAGTTGCCCGTTTTaGGGAAGTGCCTTGGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: EKPTDALFLRVLAPLLHPGSCPF*GSALEG Trigger: CCCCTCCAAGGCACTTCCTCAAAACGGGCAACTACC...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGGCTCCAGGAGAGCAGTaGGTGCTCCAAGAGAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: EKPTDALFLRVLAPLLHPAPGEQ*VLQESS Trigger: ACTGCTCTCTTGGAGCACTCACTGCTCTCCTGGAGC...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATCAGGAGAGCAGTGAGTaGTCCAAGAGAGCAGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PAARQLSLAAVPLSRVLHQESSE*SKRAVS Trigger: GCTCACTGCTCTCTTGGAGCACTCACTGCTCTCCTG...ATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGTCTCCTTGGCAGCAGTaGCCCTTTCCAGGGTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: EPKYPMPVHCCPGFPEQESPWQQ*PFPGFY Trigger: GTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGA...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGCCTTCCTTCCCTGCATaGAGTGCTTGGGCCCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PYPNSSASCGDGGDCEALPSFPA*SAWALL Trigger: CAACAGGGCCCAAGCACTGCATGCAGGGAAGGAAGG...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGAGAGGACAGGGGGCTTaGGTTTCACTGCTTCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: EKPTDALFLRVLAPLLHPRGQGA*VSLLQG Trigger: CCCCTGAAGCAGTGAAACCCAAGCCCCCTGTCCTCT...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCGCTCCACTCTTGCGACGGCATTCAGCAGCTGTATGCCAAAGCACACCTTCAGATGGCACCGCCCATaGAGTGGCCCAGGAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ARSTLATAFSSCMPKHTFRWHRP*SGPGGR Trigger: TCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCT...GAAGGTGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCACTCTTGCGACGGCATTCAGCAGCTGTATGCCAAAGCACACCTTCAGCCCTGCAGCCACTAGGATaGAGATGGCACCGCCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: APLLRRHSAAVCQSTPSALQPLG*RWHRPW Trigger: CCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAG...GGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR CAA 90 bp | GCTCGGCAGACGAGTGGGTCAGAGTTGTACAGGTCAACCTCCGACTaGTTCCGAGACAGCACGCTGGAGTCAATGCGCCCCAAGGTCATA | + |
|
Preference number: 2 (lower is better) Translates to: ARQTSGSELYRSTSD*FRDSTLESMRPKVI Trigger: TATGACCTTGGGGCGCATTGACTCCAGCGTGCTGTCTCGGAACAAGTCGGAGGTTGACCTGTACAACTCTGACCCACTCGTCTGCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR TCA 90 bp | CAATTAGGGGGCTGGGTCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCGAGGAAAGAGACCTCTaGTTATTGCAGACTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: QLGGWVLGRPTLCGGTGSEERDL*LLQTGI Trigger: GATCCCAGTCTGCAATAATCAGAGGTCTCTTTCCTC...GGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGACCCAGCCCCCTAATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGCCCGTTTTGAGGAAGTaGCTTGGAGGGGCACATGAG | + |
|
Preference number: 2 (lower is better) Translates to: PYPNSSASCGDGGDCEALPVLRK*LGGAHE Trigger: CTCATGTGCCCCTCCAAGGCACTTCCTCAAAACGGG...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTTTACAGGAGCTGGGAGAGGTaGGCAATGCTGCTTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ADRPCVGVLVPPKPPRLYRSWER*AMLLCF Trigger: AAAGCAAAGCAGCATTGCCCACCTCTCCCAGCTCCT...GTAAAGCCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGAGGAGCTGGGAGAGGTaGGCAATGCTGCTTTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: EPKYPMPVHCCPGFPEQERSWER*AMLLCF Trigger: AAAGCAAAGCAGCATTGCCCACCTCTCCCAGCTCCT...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | CGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTTTACCCACCCCAGTCAGAGAGGACTTaGTTCAGGAGGAAAGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: RPCVGVLVPPKPPRLYPPQSERT*FRRKET Trigger: GGTCTCTTTCCTCCTGAACCAAGTCCTCTCTGACTG...GGGTGGGTAAAGCCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGAGCCTCTCTGAGGCCTaGCTGGGCCATCCTGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: DRTPEVTARPSVKIEVLQSLSEA*LGHPAA Trigger: TGCAGCAGGATGGCCCAGCCAGGCCTCAGAGAGGCT...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGTTTTGGGAGCAGCCTTaGGTGGCTCCTGGTGAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: PYPNSSASCGDGGDCEALFWEQP*VAPGES Trigger: ACTCTCACCAGGAGCCACCCAAGGCTGCTCCCAAAA...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGCAAGGACCTTCAAAGTCGATGCAGATTCCGGATTGGCAAGGACCAGAGGCTGCAGCCACTAGGATaGAGATGGCACCGCCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: GSKDLQSRCRFRIGKDQRLQPLG*RWHRPW Trigger: CCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAG...CCTCTGGTCCTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTCCTTGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR CAA 90 bp | TGGCAAGGACCAGAGGTGAAATCAGGACCATGCCAGAAAAGTAGGTaGGCCTCTCTGCAGCCACTAGGATGGAGATGGCACCGCCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: WQGPEVKSGPCQKSR*ASLQPLGWRWHRPW Trigger: CCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAGAGAGGCCAACCTACTTTTCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCAGCCTGGGCATTGCTCGCTCCACTCTTGCGACGGCATTCAGCAGCTGTATGGCAAGGACCAGAGGTaGAATCAGGACCATGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CQPGHCSLHSCDGIQQLYGKDQR*NQDHAR Trigger: TCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCC...ATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCAGGCTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR GCA 90 bp | CAATTAGGGGGCTGGGTCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCCCCTCCTTCATAAAGTaGCTGCTCCTTAAGGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: QLGGWVLGRPTLCGGTGSPSFIK*LLLKVV Trigger: TACTACCTTAAGGAGCAGGCACTTTATGAAGGAGGG...GGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGACCCAGCCCCCTAATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCACTGGGATCTGGGACTaGCAGAGAGTCCCCGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSTGIWD*QRVPEP Trigger: GGGTTCGGGGACTCTCTGGCAGTCCCAGATCCCAGT...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTGAGACCTCTGATTATTaGAGACTGGGATCTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: LRGGSGQLLGPSFPACSAETSDY*RLGSGT Trigger: AGTCCCAGATCCCAGTCTGCAATAATCAGAGGTCTC...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCTTCCCTGCATGCAGTaGTTGGGCCCTGTTGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSLPCMQ*LGPVEG Trigger: CCCCTCAACAGGGCCCAAGCACTGCATGCAGGGAAG...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGCAGTCAGAGAGGACTTaGTTCAGGAGGAAAGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: EPKYPMPVHCCPGFPEQEQSERT*FRRKET Trigger: GGTCTCTTTCCTCCTGAACCAAGTCCTCTCTGACTG...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGAGGAAAGAGACCTCTaGTTATTGCAGACTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: PAARQLSLAAVPLSRVLHEERDL*LLQTGI Trigger: GATCCCAGTCTGCAATAATCAGAGGTCTCTTTCCTC...ATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTGAGGAAAGAGACCTCTaGTTATTGCAGACTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: AGCEQSTPPMLTWWREAVEERDL*LLQTGI Trigger: GATCCCAGTCTGCAATAATCAGAGGTCTCTTTCCTC...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGGGTAGTTGCCCGTTTTaGGGAAGTGCCTTGGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DRTPEVTARPSVKIEVLQGSCPF*GSALEG Trigger: CCCCTCCAAGGCACTTCCTCAAAACGGGCAACTACC...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCGCTCCAAGAGAGCAGTaGGCCCCAGTTATTGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSAPREQ*APVIAG Trigger: GCCAGCAATAACTGGGGCTCACTGCTCTCTTGGAGC...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGGACAGTCTTAACTTCTaGTCATCCCACCCCTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: PYPNSSASCGDGGDCEALDSLNF*SSHPWV Trigger: AACCCAGGGGTGGGATGATCAGAAGTTAAGACTGTC...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGGGGCTTGGGTTTCACTaGTTCAGGGGAGCCTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: DRTPEVTARPSVKIEVLQGLGFH*FRGASL Trigger: CAGAGAGGCTCCCCTGAAGCAGTGAAACCCAAGCCC...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | ACGAGTTTACTTCATGGAGGACGGAGTTGGTCACTTCCGGAAGCTCCCTGTGGAGCAGGTAGGCACCTTTaGTGTCGCAAAGCCGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TSLLHGGRSWSLPEAPCGAGRHL*CRKAGQ Trigger: CTGACCGGCTTTGCGACAGCAAAGGTGCCTACCTGC...TCCACAGGGAGCTTCCGGAAGTGACCAACTCCGTCCTCCATGAAGTAAACTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGTTGCAGACTGGGATCTaGGACTGCCAGAGAGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: DRTPEVTARPSVKIEVLQLQTGI*DCQRVP Trigger: GGGGACTCTCTGGCAGTCCCAGATCCCAGTCTGCAA...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGCCTGTGTGGGGGTACTaGTTCCTCCAAAGCCGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: DRTPEVTARPSVKIEVLQPVWGY*FLQSRL Trigger: TAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGG...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATCCCTCCTTCATAAAGTaGCTGCTCCTTAAGGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: PAARQLSLAAVPLSRVLHPSFIK*LLLKVV Trigger: TACTACCTTAAGGAGCAGGCACTTTATGAAGGAGGG...ATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGGAGACCTCTGATTATTaGAGACTGGGATCTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: PYPNSSASCGDGGDCEALETSDY*RLGSGT Trigger: AGTCCCAGATCCCAGTCTGCAATAATCAGAGGTCTC...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGGAGACCTCTGATTATTaGAGACTGGGATCTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: EKPTDALFLRVLAPLLHPETSDY*RLGSGT Trigger: AGTCCCAGATCCCAGTCTGCAATAATCAGAGGTCTC...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGCCCGTTTTGAGGAAGTaGCTTGGAGGGGCACATGAG | + |
|
Preference number: 2 (lower is better) Translates to: DRTPEVTARPSVKIEVLQPVLRK*LGGAHE Trigger: CTCATGTGCCCCTCCAAGGCACTTCCTCAAAACGGG...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCTCCCTTCCCCCAGCCTaGCTTCCATCTGAAAAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSSLPPA*LPSEKS Trigger: CGACTTTTCAGATGGAAGCCAGGCTGGGGGAAGGGA...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTTTTCCCAAAGCAAGTTaGACTAGGGTACTAAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AGCEQSTPPMLTWWREAVFPKAS*TRVLRV Trigger: AACCCTTAGTACCCTAGTGCAACTTGCTTTGGGAAA...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGCCCTCCTTCATAAAGTaGCTGCTCCTTAAGGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: EKPTDALFLRVLAPLLHPPSFIK*LLLKVV Trigger: TACTACCTTAAGGAGCAGGCACTTTATGAAGGAGGG...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGAGCTGGCGTTTGGTTTaGAAAAGTGGCATTGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: EKPTDALFLRVLAPLLHPSWRLV*KSGIVS Trigger: ACTGACAATGCCACTTTTCCAAACCAAACGCCAGCT...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCGACTTGTTCCGAGACAGCACGCTGGAGTCAATGCGCCCCAAGGTCATATTTGGTAGTCCTTCTGGATaGTGTCCACGTGTTGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SDLFRDSTLESMRPKVIFGSPSG*CPRVAA Trigger: TGCTGCAACACGTGGACACCATCCAGAAGGACTACC...AAATATGACCTTGGGGCGCATTGACTCCAGCGTGCTGTCTCGGAACAAGTCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCACAGATCTGAGCACAGTAGTCTGGAATGGTTTTAACTTAATGGAGAGCCAACTGTCCAGGGTTCCCTaGGCAGGAGGGAGTGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VTDLSTVVWNGFNLMESQLSRVP*AGGSAG Trigger: GCCAGCACTCCCTCCTGCTCAGGGAACCCTGGACAG...TTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGTTTCCCAAAGCAAGTTaGACTAGGGTACTAAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: PYPNSSASCGDGGDCEALFPKAS*TRVLRV Trigger: AACCCTTAGTACCCTAGTGCAACTTGCTTTGGGAAA...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | CGAGACAGCACGCTGGAGTCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAAGTTGCAGCACATCTCTaGCAAAAACTTGGAAGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: RDSTLESMRPKVIFGRTKVAAHL*QKLGSP Trigger: CGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAAC...TTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCGTGCTGTCTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCACAGATCTGAGCACAGTAGTCTGGAATGGTTTTAACTTAATGGAGAGCCAAAGCCTCTCTGAGGCCTaGCTGGGCCATCCTGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VTDLSTVVWNGFNLMESQSLSEA*LGHPAA Trigger: TGCAGCAGGATGGCCCAGCCAGGCCTCAGAGAGGCT...TTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CAA 90 bp | ACGCTGGAGTCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATaGAGCAGTTTGGCAGCAAGGACCTTCAAAGTCGATGCAGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: TLESMRPKVIFGRTK*SSLAARTFKVDADS Trigger: GGAATCTGCATCGACTTTGAAGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTGGCAGCAAGGACCTTCAAAGTCGATGCAGATTCCGGATTGGCAAGGACCAGTGAAATCAGGACCATaGCAGAAAAGTAGGTTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: VWQQGPSKSMQIPDWQGPVKSGP*QKSRLA Trigger: GGCCAACCTACTTTTCTGGCATGGTCCTGATTTCAC...TGGTCCTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTCCTTGCTGCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGTTTGGTTTGGAAAAGTaGCATTGTCAGTGTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PYPNSSASCGDGGDCEALFGLEK*HCQCAF Trigger: AAAAGCACACTGACAATGCCACTTTTCCAAACCAAA...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CAA 90 bp | TCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATTGAGCAGTTaGGCAGCAAGGACCTTCAAAGTCGATGCAGATTCCGGATTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SMRPKVIFGRTKLSS*AARTFKVDADSGLA Trigger: TGCCAATCCGGAATCTGCATCGACTTTGAAGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCACAGATCTGAGCACAGTAGTCTGGAATGGTTTTAACTTAATGGAGAGCCAAGCTCCAGGAGAGCAGTaGGTGCTCCAAGAGAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VTDLSTVVWNGFNLMESQAPGEQ*VLQESS Trigger: ACTGCTCTCTTGGAGCACTCACTGCTCTCCTGGAGC...TTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGCTGGAGTCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATTGAGCAGTGTTGCAGCACATCTCTaGCAAAAACTTGGAAGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: TLESMRPKVIFGRTKLSSVAAHL*QKLGSP Trigger: CGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAAC...ACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATTGAGCAGTTTGGCAGCGTGAAATCAGGACCATaGCAGAAAAGTAGGTTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: VNAPQGHIWQDKIEQFGSVKSGP*QKSRLA Trigger: GGCCAACCTACTTTTCTGGCATGGTCCTGATTTCAC...GCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGGACGTGATAGGCACCTTCATACATCTTGAGTGTTTTGTCCTGACTCCGGGAGACCTTCAAAGTCGATaGAGATTCCGGATTGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: EDVIGTFIHLECFVLTPGDLQSR*RFRIGK Trigger: CTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTC...TCCCGGAGTCAGGACAAAACACTCAAGATGTATGAAGGTGCCTATCACGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAATTCAGAATTATTTATTCTTGGTGGCCACATCAAGACGTGGGCTGCTTCTTTTTAATGGAGACGGATaGAACAGGACAAAACATTCT | + |
|
Preference number: 2 (lower is better) Translates to: QIQNYLFLVATSRRGLLLFNGDG*NRTKHS Trigger: AGAATGTTTTGTCCTGTTGCATCCGTCTCCATTAAA...AAGAAGCAGCCCACGTCTTGATGTGGCCACCAAGAATAAATAATTCTGAATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCGAGAGGACAGGGGGCTaGGGTTTCACTGCTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GALDSSWALPSLHAVLGPERTGG*GFTASG Trigger: CCCTGAAGCAGTGAAACCCAAGCCCCCTGTCCTCTC...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR GCA 72 bp | AGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTaGATGCAGTGCTTGGGCCCTGTTGAGGGGCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGLWTAPGPFLP*MQCLGPVEGHS Trigger: ACTGTGCCCCTCAACAGGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCAGGCAGCCAGCACCGTGGTGGCTCCATGGGAGTCTCTCCTACCACCAGGGGGAGAAGAGCTATTaGGGGCCACCTTCCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PGRQPAPWWLHGSLSYHQGEKSY*GPPSLP Trigger: GGGAAGGGAAGGTGGCCCCAAATAGCTCTTCTCCCC...CTGGTGGTAGGAGAGACTCCCATGGAGCCACCACGGTGCTGGCTGCCTGCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR TCA 72 bp | GCTGGTCAGGCTTCCTCCAGTGACAGGGGCGGAGTCTaGCGAGACTGGCCTAGCTCTCTACAGAGGGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AGQASSSDRGGV*RDWPSSLQREP Trigger: GGGCTCCCTCTGTAGAGAGCTAGGCCAGTCTCGTCAGACTCCGCCCCTGTCACTGGAGGAAGCCTGACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | TGCCCCTGGCAGGCAGCCAGCACCGTGGTGGCTCCATaGGAGTCTCTCCTACCACCAGAGGTAGCTGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: CPWQAASTVVAP*ESLLPPEVAVL Trigger: TAGCACAGCTACCTCTGGTGGTAGGAGAGACTCCCATGGAGCCACCACGGTGCTGGCTGCCTGCCAGGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | AGTGAGCCCCAGTTATTGCTGGCGCTAAGTGAGGCCTaGGGGAGGCCTTCAGGCGGGCACCTGAGAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SEPQLLLALSEA*GRPSGGHLRGQ Trigger: CTGTCCTCTCAGGTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGGCTCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTGAGAGGACAGGGGGCTaGGGTTTCACTGCTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRGGSGQLLGPSFPACSAERTGG*GFTASG Trigger: CCCTGAAGCAGTGAAACCCAAGCCCCCTGTCCTCTC...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | TTTCACTGCTTCAGGGGAGCCTCTCTGAGGCCTGGCTaGGCCATCCTGCTGCAGTCTGGCATGGGGTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FHCFRGASLRPG*AILLQSGMGCR Trigger: TCTGCACCCCATGCCAGACTGCAGCAGGATGGCCCAGCCAGGCCTCAGAGAGGCTCCCCTGAAGCAGTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | CCTTCACCCGGGGGAGGACCATCGGCGGTTTCTTGCTaGCTTCCACCTTCTTCAGGCCGAGCCTTGTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSPGGGPSAVSC*LPPSSGRALCV Trigger: GACACACAAGGCTCGGCCTGAAGAAGGTGGAAGCCAGCAAGAAACCGCCGATGGTCCTCCCCCGGGTGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | AGATGGCACCGCCCATGGAGTGGCCCAGGAGGAAGATaGGGACGTCGGGGTAGTCCTTCTGGATGGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RWHRPWSGPGGR*GRRGSPSGWCP Trigger: TGGACACCATCCAGAAGGACTACCCCGACGTCCCCATCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR TCA 72 bp | TGCAGACAGCTGTGGTCCTTGTCTGCCGGTAGTCATTaGAGTGCTCTGTGCTGCCCCTGGCAGGCAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CRQLWSLSAGSH*SALCCPWQAAS Trigger: GCTGGCTGCCTGCCAGGGGCAGCACAGAGCACTTCAATGACTACCGGCAGACAAGGACCACAGCTGTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR GCA 72 bp | CCCTTCCAGCAGCCAGGCAGCTCTCCTTGGCAGCAGTaGCCCTTTCCAGGGTTCTACATGCATCGACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PFQQPGSSPWQQ*PFPGFYMHRQD Trigger: GTCCTGTCGATGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR GCA 72 bp | TGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTaGTTGGGCCCTGTTGAGGGGCACAGTGACCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: WTAPGPFLPCMQ*LGPVEGHSDLM Trigger: CATAAGGTCACTGTGCCCCTCAACAGGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | AGTAGGTTGGCCTCTCTGCAGCCACTAGGATGGAGATaGCACCGCCCATGGAGTGGCCCAGGAGGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SRLASLQPLGWR*HRPWSGPGGRW Trigger: CCATCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAGAGAGGCCAACCTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCCAGTCAGAGAGGACTaGGTTCAGGAGGAAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SSADRPCVGVLVPPKPPRPVRED*VQEERD Trigger: GTCTCTTTCCTCCTGAACCAAGTCCTCTCTGACTGG...CCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGGGGGAGAAGAGCTATTaGGGGCCACCTTCCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PYPNSSASCGDGGDCEALGEKSY*GPPSLP Trigger: GGGAAGGGAAGGTGGCCCCAAATAGCTCTTCTCCCC...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGGGGGAGAAGAGCTATTaGGGGCCACCTTCCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: EKPTDALFLRVLAPLLHPGEKSY*GPPSLP Trigger: GGGAAGGGAAGGTGGCCCCAAATAGCTCTTCTCCCC...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGAGTGAGCCCCAGTTATaGCTGGCGCTAAGTGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: EPKYPMPVHCCPGFPEQESEPQL*LALSEA Trigger: GGCCTCACTTAGCGCCAGCAATAACTGGGGCTCACT...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATAGTGAGCCCCAGTTATaGCTGGCGCTAAGTGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PAARQLSLAAVPLSRVLHSEPQL*LALSEA Trigger: GGCCTCACTTAGCGCCAGCAATAACTGGGGCTCACT...ATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR GCA 72 bp | CTCGCTCCACTCTTGCGACGGCATTCAGCAGCTGTATaGCAAAGCACACCTTCAGCCCTGCTCGGCAGACGA | + |
|
Preference number: 3 (lower is better) Translates to: LAPLLRRHSAAV*QSTPSALLGRR Trigger: TCGTCTGCCGAGCAGGGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR GCA 72 bp | GCCTGGCCAGCATGTTCAGGGTGGACACCCAGCTCCTaGTGCTGCTATCCTGTGAGACACCCACGAGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: AWPACSGWTPSS*CCYPVRHPRVY Trigger: GTAAACTCGTGGGTGTCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCACCCTGAACATGCTGGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
||
| 3UTR CCA 72 bp | CAGAAAAGTAGGTTGGCCTCTCTGCAGCCACTAGGATaGAGATGGCACCGCCCATGGAGTGGCCCAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QKSRLASLQPLG*RWHRPWSGPGG Trigger: TCCTCCTGGGCCACTCCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAGAGAGGCCAACCTACTTTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR CCA 72 bp | GACCATGAGCTGGTTGCCTGGCCAGCATGTTCAGGGTaGACACCCAGCTCCTGCTGCTGCTATCCTGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DHELVAWPACSG*TPSSCCCYPVR Trigger: TCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCACCCTGAACATGCTGGCCAGGCAACCAGCTCATGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCGCCAGGCAGCTCTCCTaGGCAGCAGTGCCCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSARQLS*AAVPLS Trigger: GGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGC...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTACCATCGGCGGTTTCTaGCTGGCTTCCACCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: AGCEQSTPPMLTWWREAVTIGGF*LASTFF Trigger: GAAGAAGGTGGAAGCCAGCAAGAAACCGCCGATGGT...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCACCAGTCAGAGAGGACTaGGTTCAGGAGGAAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: AARQLSLAAVPLSRVLHAPVRED*VQEERD Trigger: GTCTCTTTCCTCCTGAACCAAGTCCTCTCTGACTGG...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGGCCGCCAGCTGGCGTTaGGTTTGGAAAAGTGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: PYPNSSASCGDGGDCEALAASWR*VWKSGI Trigger: AATGCCACTTTTCCAAACCAAACGCCAGCTGGCGGC...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR TCA 72 bp | CAGGGTGGACACCCAGCTCCTGCTGCTGCTATCCTGTaGGACACCCACGAGTTTACTTCATGGAGGACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGGHPAPAAAIL*DTHEFTSWRTE Trigger: CTCCGTCCTCCATGAAGTAAACTCGTGGGTGTCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
||
| 3UTR GCA 72 bp | CTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATaGATCGACAGGACTCCTGAGGTAACAGCAAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLGSSAPFQGST*IDRTPEVTARP Trigger: GGGCCTTGCTGTTACCTCAGGAGTCCTGTCGATGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR GCA 72 bp | TGGCAGTGTCAGCCTGGGCATTGCTCGCTCCACTCTTaGGACGGCATTCAGCAGCTGTATGCCAAAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: WQCQPGHCSLHS*DGIQQLYAKAH Trigger: GTGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCAGGCTGACACTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR CCA 72 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATaGTGGAGGGAGGCTGTTCCCCTATCTCTAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: AGCEQSTPPMLT*WREAVPLSLRN Trigger: GTTCCTTAGAGATAGGGGAACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCAGTGTCAGCCTGGGCATTGCTCGCTCCACTCTTGCGACGGCATTCAGCTGCCAGAAAAGTAGGTaGGCCTCTCTGCAGCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: NGSVSLGIARSTLATAFSCQKSR*ASLQPL Trigger: TAGTGGCTGCAGAGAGGCCAACCTACTTTTCTGGCA...GCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCAGGCTGACACTGCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR GCA 72 bp | TGGCCAGCATGTTCAGGGTGGACACCCAGCTCCTGCTaGTGCTATCCTGTGAGACACCCACGAGTTTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: WPACSGWTPSSC*CYPVRHPRVYF Trigger: GAAGTAAACTCGTGGGTGTCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCACCCTGAACATGCTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
||
| 3UTR CCA 72 bp | TTCCCAGGACCTAGAATCAACTCCAGAAAGGACACTTaGATCCCACCTTCCTGGAGGCCCACCCACCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FPGPRINSRKDT*IPPSWRPTHPF Trigger: GAAGGGGTGGGTGGGCCTCCAGGAAGGTGGGATCCAAGTGTCCTTTCTGGAGTTGATTCTAGGTCCTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | GCCAAAGCACACCTTCAGCCCTGCTCGGCAGACGAGTaGGTCAGAGTTGTACAGGTCAACCTCCGACTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AKAHLQPCSADE*VRVVQVNLRLV Trigger: AACAAGTCGGAGGTTGACCTGTACAACTCTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGCTTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR GCA 72 bp | GGCCCTAAGTCCATGGTTGTTGGAAAAGCCCACAGATaGTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GPKSMVVGKAHR*SVLAGSGSPPS Trigger: TGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGACTTAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR GCA 72 bp | ATTCAGCAGCTGTATGCCAAAGCACACCTTCAGCCCTaGTCGGCAGACGAGTGGGTCAGAGTTGTACAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: IQQLYAKAHLQP*SADEWVRVVQV Trigger: GACCTGTACAACTCTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR GCA 72 bp | CCAGCATGTTCAGGGTGGACACCCAGCTCCTGCTGCTaGTATCCTGTGAGACACCCACGAGTTTACTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: PACSGWTPSSCC*YPVRHPRVYFM Trigger: CATGAAGTAAACTCGTGGGTGTCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCACCCTGAACATGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
||
| 3UTR CCA 72 bp | GGTTCAGGAGGAAAGAGACCTCTGATTATTGCAGACTaGGATCTGGGACTGCCAGAGAGTCCCCGAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSGGKRPLIIAD*DLGLPESPRTP Trigger: TGGGGTTCGGGGACTCTCTGGCAGTCCCAGATCCCAGTCTGCAATAATCAGAGGTCTCTTTCCTCCTGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | GAGACACCCACGAGTTTACTTCATGGAGGACGGAGTTaGTCACTTCCGGAAGCTCCCTGTGGAGGACGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ETPTSLLHGGRS*SLPEAPCGGRD Trigger: ATCACGTCCTCCACAGGGAGCTTCCGGAAGTGACCAACTCCGTCCTCCATGAAGTAAACTCGTGGGTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203824.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCTCCAGAAAGGACACTaGGATCCCACCTTCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSLQKGH*DPTFLE Trigger: CTCCAGGAAGGTGGGATCCAAGTGTCCTTTCTGGAG...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCATTGTCAGTGTGCTTTaGGGAGCAGCCTTGGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSIVSVL*GAALGG Trigger: GCCACCCAAGGCTGCTCCCAAAAGCACACTGACAAT...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCCGAGACAGCACGCTGGAGTCAATGCGCCCCAAGGTCATATTTGGCAGGAGATGCAGATTCCGGATaGGCAAGGACCAGAGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CSETARWSQCAPRSYLAGDADSG*ARTRGE Trigger: TTCACCTCTGGTCCTTGCCAATCCGGAATCTGCATC...TCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCGTGCTGTCTCGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTCAGCCCTGCTCGGCAGACGAGTGGGTCAGAGTTGTACAGGTCAACCTCCTTTGGCAGGACAAAATaGAGCAGTTTGGCAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TFSPARQTSGSELYRSTSFGRTK*SSLAAR Trigger: CCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAA...GGAGGTTGACCTGTACAACTCTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR CCA 72 bp | TGGCATTGTCAGTGTGCTTTTGGGAGCAGCCTTGGGTaGCTCCTGGTGAGAGTCACAGATCTGAGCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WHCQCAFGSSLG*LLVRVTDLSTV Trigger: TACTGTGCTCAGATCTGTGACTCTCACCAGGAGCCACCCAAGGCTGCTCCCAAAAGCACACTGACAATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | CATGAAAGCCGCCAGCTGGCGTTTGGTTTGGAAAAGTaGCATTGTCAGTGTGCTTTTGGGAGCAGCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HESRQLAFGLEK*HCQCAFGSSLG Trigger: CCCAAGGCTGCTCCCAAAAGCACACTGACAATGCCACTTTTCCAAACCAAACGCCAGCTGGCGGCTTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR GCA 72 bp | TCCGTAAAGATAGAAGTGCTCCAGGAGAGCAGTGAGTaGTCCAAGAGAGCAGTGAGCCCCAGTTATTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVKIEVLQESSE*SKRAVSPSYCW Trigger: CCAGCAATAACTGGGGCTCACTGCTCTCTTGGAGCACTCACTGCTCTCCTGGAGCACTTCTATCTTTACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR TCA 72 bp | GTCAGAGAGGACTTGGTTCAGGAGGAAAGAGACCTCTaGTTATTGCAGACTGGGATCTGGGACTGCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VREDLVQEERDL*LLQTGIWDCQR Trigger: TCTCTGGCAGTCCCAGATCCCAGTCTGCAATAATCAGAGGTCTCTTTCCTCCTGAACCAAGTCCTCTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCTTTGGAAAAGTGGCATaGTCAGTGTGCTTTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSFGKVA*SVCFWE Trigger: CTCCCAAAAGCACACTGACAATGCCACTTTTCCAAA...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR TCA 72 bp | AAAGTTACATTAGCAATCAGGAGAGAAAGGGAAGTGTaGGGTGGCCCAGAGGCAGGATGTGAGCAGAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: KVTLAIRREREV*GGPEAGCEQST Trigger: AGTGCTCTGCTCACATCCTGCCTCTGGGCCACCTCACACTTCCCTTTCTCTCCTGATTGCTAATGTAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | ATGTCATGCATGAAAGCCGCCAGCTGGCGTTTGGTTTaGAAAAGTGGCATTGTCAGTGTGCTTTTGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MSCMKAASWRLV*KSGIVSVLLGA Trigger: TGCTCCCAAAAGCACACTGACAATGCCACTTTTCCAAACCAAACGCCAGCTGGCGGCTTTCATGCATGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR TCA 72 bp | CAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATTaGGCAGTTTGGCAGCAAGGACCTTCAAAGTCGATG | + |
|
Preference number: 3 (lower is better) Translates to: QCAPRSYLAGQN*AVWQQGPSKSM Trigger: CATCGACTTTGAAGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAGATCTGAGCACAGTAGTCTGGAATGGTTTTAACTTAATGGAGAGCCAACTCCAGAAAGGACACTaGGATCCCACCTTCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VTDLSTVVWNGFNLMESQLQKGH*DPTFLE Trigger: CTCCAGGAAGGTGGGATCCAAGTGTCCTTTCTGGAG...TTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CCA 72 bp | CTCCTGGTGAGAGTCACAGATCTGAGCACAGTAGTCTaGAATGGTTTTAACTTAATGGAGAGCCAAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: LLVRVTDLSTVV*NGFNLMESQNT Trigger: GGTATTTTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGACTCTCACCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATTATTTATTCTTGGTGGCCACATCAAGACGTGGGCTGCTTCTTTGCTCCCTCAGGACAAAACATTCTaGTCTCAGGATTTTCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ELFILGGHIKTWAASLLPQDKTF*SQDFLV Trigger: CACTAGAAAATCCTGAGACAAGAATGTTTTGTCCTG...AGGGAGCAAAGAAGCAGCCCACGTCTTGATGTGGCCACCAAGAATAAATAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| 3UTR CCA 72 bp | TCAGAATTATTTATTCTTGGTGGCCACATCAAGACGTaGGCTGCTTCTTTGCTCCCTGGACTCTTAAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SELFILGGHIKT*AASLLPGLLNN Trigger: ATTGTTTAAGAGTCCAGGGAGCAAAGAAGCAGCCCACGTCTTGATGTGGCCACCAAGAATAAATAATTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCGCACACCTTCAGCCCTaGTCGGCAGACGAGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GALDSSWALPSLHAVLGPAHLQP*SADEWV Trigger: GACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGC...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACGCACACCTTCAGCCCTaGTCGGCAGACGAGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQLLLALSEAWGRPSGGHAHLQP*SADEWV Trigger: GACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGC...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCCTGCAGCCACTAGGATaGAGATGGCACCGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GALDSSWALPSLHAVLGPLQPLG*RWHRPW Trigger: CCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAG...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCGGCAAGGACCAGAGGTaGAATCAGGACCATGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GALDSSWALPSLHAVLGPGKDQR*NQDHAR Trigger: TCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCC...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACGTCCTGACTCCGGGATaGTTCCATGAGCAGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQLLLALSEAWGRPSGGHVLTPG*FHEQVG Trigger: GCCTACCTGCTCATGGAATCATCCCGGAGTCAGGAC...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCTGTTCCCCAGCTCCATaGGACACAAAGATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GALDSSWALPSLHAVLGPCSPAP*DTKMRA Trigger: GGCCCTCATCTTTGTGTCCCATGGAGCTGGGGAACA...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGACTGTCCGTCTGCATTaGCCAGGTGAGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSADRPCVGVLVPPKPPRTVRLH*PGEAGP Trigger: AGGACCTGCCTCACCTGGTCAATGCAGACGGACAGT...CCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACGGCAAGGACCAGAGGTaGAATCAGGACCATGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQLLLALSEAWGRPSGGHGKDQR*NQDHAR Trigger: TCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCC...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGGCAGCCAGCACCGTGGTGGCTCCATGGGAGTCTCTCCTACCACCAGGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRQPAPWWLHGSLSYHQEVLSV*IDQVRQ Trigger: CTGCCTCACCTGGTCAATGCAGACGGACAGTACCTC...CTGGTGGTAGGAGAGACTCCCATGGAGCCACCACGGTGCTGGCTGCCTGCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACTGGACACCCAGCTCCTaGTGCTGCTATCCTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQLLLALSEAWGRPSGGHWTPSS*CCYPVR Trigger: TCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCA...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTAGATGGCACCGCCCATaGAGTGGCCCAGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRGGSGQLLGPSFPACSARWHRP*SGPGGR Trigger: TCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCT...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTGCAGCAGCAGGAATaGCAGTGTCAGCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSADRPCVGVLVPPKPPRLQQQE*QCQPGH Trigger: ATGCCCAGGCTGACACTGCCATTCCTGCTGCTGCAG...CCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | CAATTAGGGGGCTGGGTCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCCATGGAGGACGGAGTTaGTCACTTCCGGAAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLGGWVLGRPTLCGGTGSHGGRS*SLPEAP Trigger: GGGAGCTTCCGGAAGTGACCAACTCCGTCCTCCATG...GGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGACCCAGCCCCCTAATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGAGAGCCAACTAGTCCTCAATTAGGGGGCTGGGTCCTCGGCAGACCGCATGGGACACAAAGATaGGGGCCTTGGGTGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGEPTSPQLGGWVLGRPHGTQR*GPWVCH Trigger: GTGGCACACCCAAGGCCCTCATCTTTGTGTCCCATG...CGGTCTGCCGAGGACCCAGCCCCCTAATTGAGGACTAGTTGGCTCTCCTGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTCTCTCCCTCACTCTaGCCATGGCCAACATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSADRPCVGVLVPPKPPRLSPSL*PWPTWS Trigger: TGACCATGTTGGCCATGGGCAGAGTGAGGGAGAGAG...CCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGCTCGCTCCACTCTTaGGACGGCATTCAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRGGSGQLLGPSFPACSACSLHS*DGIQQL Trigger: CAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCA...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTTTACCCACCCGCAGGTAGGCACCTTTaGTGTCGCAAAGCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPCVGVLVPPKPPRLYPPAGRHL*CRKAGQ Trigger: CTGACCGGCTTTGCGACAGCAAAGGTGCCTACCTGC...GGGTGGGTAAAGCCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAGGCAGCCAGCACCGTGGTGGCTCCATGGGAGTCTCTCCTACCACCAGGGTAGTCCTTCTGGATaGTGTCCACGTGTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRQPAPWWLHGSLSYHQGSPSG*CPRVAA Trigger: TGCTGCAACACGTGGACACCATCCAGAAGGACTACC...CTGGTGGTAGGAGAGACTCCCATGGAGCCACCACGGTGCTGGCTGCCTGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGAGATGGCACCGCCCATaGAGTGGCCCAGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPKYPMPVHCCPGFPEQERWHRP*SGPGGR Trigger: TCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCT...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CAA 72 bp | ACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTaGGGCCCTGTTGAGGGGCACAGTGACCTTATGACC | + |
|
Preference number: 4 (lower is better) Translates to: TAPGPFLPCMQC*GPVEGHSDLMT Trigger: GGTCATAAGGTCACTGTGCCCCTCAACAGGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTACTGTCCGTCTGCATTaGCCAGGTGAGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGCEQSTPPMLTWWREAVTVRLH*PGEAGP Trigger: AGGACCTGCCTCACCTGGTCAATGCAGACGGACAGT...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCACATGGGACACAAAGATaGGGGCCTTGGGTGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AARQLSLAAVPLSRVLHAHGTQR*GPWVCH Trigger: GTGGCACACCCAAGGCCCTCATCTTTGTGTCCCATG...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGCATGGGACACAAAGATaGGGGCCTTGGGTGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EPKYPMPVHCCPGFPEQEHGTQR*GPWVCH Trigger: GTGGCACACCCAAGGCCCTCATCTTTGTGTCCCATG...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCGTTGCAGCACATCTCTaGCAAAAACTTGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GALDSSWALPSLHAVLGPVAAHL*QKLGSP Trigger: CGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAAC...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTGTCCTGACTCCGGGATaGTTCCATGAGCAGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGCEQSTPPMLTWWREAVVLTPG*FHEQVG Trigger: GCCTACCTGCTCATGGAATCATCCCGGAGTCAGGAC...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGGCAGCCAGCACCGTGGTGGCTCCATGGGAGTCTCTCCTACCACCAGCATTCAGCAGCTGTATaGCAAAGCACACCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRQPAPWWLHGSLSYHQHSAAV*QSTPSA Trigger: GGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATG...CTGGTGGTAGGAGAGACTCCCATGGAGCCACCACGGTGCTGGCTGCCTGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATTGCTCGCTCCACTCTTaGGACGGCATTCAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAARQLSLAAVPLSRVLHCSLHS*DGIQQL Trigger: CAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCA...ATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTGCAGGTAGGCACCTTTaGTGTCGCAAAGCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGCEQSTPPMLTWWREAVAGRHL*CRKAGQ Trigger: CTGACCGGCTTTGCGACAGCAAAGGTGCCTACCTGC...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTCCCTCACTCTGCCCATaGCCAACATGGTCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGCEQSTPPMLTWWREAVPSLCP*PTWSWA Trigger: TGCCCATGACCATGTTGGCCATGGGCAGAGTGAGGG...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGAGATGGCACCGCCCATaGAGTGGCCCAGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PYPNSSASCGDGGDCEALRWHRP*SGPGGR Trigger: TCTTCCTCCTGGGCCACTCCATGGGCGGTGCCATCT...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGCTGCAGCCACTAGGATaGAGATGGCACCGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EKPTDALFLRVLAPLLHPLQPLG*RWHRPW Trigger: CCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAG...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGCTGCAGCCACTAGGATaGAGATGGCACCGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PYPNSSASCGDGGDCEALLQPLG*RWHRPW Trigger: CCATGGGCGGTGCCATCTCCATCCTAGTGGCTGCAG...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTTTACCTGCAGCAGCAGGAATaGCAGTGTCAGCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPCVGVLVPPKPPRLYLQQQE*QCQPGH Trigger: ATGCCCAGGCTGACACTGCCATTCCTGCTGCTGCAG...GTAAAGCCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTCATGGAGGACGGAGTTaGTCACTTCCGGAAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGCEQSTPPMLTWWREAVHGGRS*SLPEAP Trigger: GGGAGCTTCCGGAAGTGACCAACTCCGTCCTCCATG...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCACATGGAGGACGGAGTTaGTCACTTCCGGAAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AARQLSLAAVPLSRVLHAHGGRS*SLPEAP Trigger: GGGAGCTTCCGGAAGTGACCAACTCCGTCCTCCATG...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCCACGAGTTTACTTCATaGAGGACGGAGTTGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GALDSSWALPSLHAVLGPHEFTS*RTELVT Trigger: AGTGACCAACTCCGTCCTCCATGAAGTAAACTCGTG...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| CDS-3UTR TCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGACTGTCCGTCTGCATTaGCCAGGTGAGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKPTDALFLRVLAPLLHPTVRLH*PGEAGP Trigger: AGGACCTGCCTCACCTGGTCAATGCAGACGGACAGT...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGGCAGCCAGCACCGTGGTGGCTCCATGGGAGTCTCTCCTACCACCAGTTGGCAGGACAAAATTaGGCAGTTTGGCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRQPAPWWLHGSLSYHQLAGQN*AVWQQG Trigger: TCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAA...CTGGTGGTAGGAGAGACTCCCATGGAGCCACCACGGTGCTGGCTGCCTGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGGTCCTGACTCCGGGATaGTTCCATGAGCAGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKPTDALFLRVLAPLLHPVLTPG*FHEQVG Trigger: GCCTACCTGCTCATGGAATCATCCCGGAGTCAGGAC...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGCTCTCTCCCTCACTCTaGCCATGGCCAACATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EPKYPMPVHCCPGFPEQELSPSL*PWPTWS Trigger: TGACCATGTTGGCCATGGGCAGAGTGAGGGAGAGAG...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGGCAGCCAGCACCGTGGTGGCTCCATGGGAGTCTCTCCTACCACCAGGTGAAATCAGGACCATaGCAGAAAAGTAGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRQPAPWWLHGSLSYHQVKSGP*QKSRLA Trigger: GGCCAACCTACTTTTCTGGCATGGTCCTGATTTCAC...CTGGTGGTAGGAGAGACTCCCATGGAGCCACCACGGTGCTGGCTGCCTGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CAATTAGGGGGCTGGGTCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCCATTCAGCAGCTGTATaGCAAAGCACACCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLGGWVLGRPTLCGGTGSHSAAV*QSTPSA Trigger: GGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATG...GGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGACCCAGCCCCCTAATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTTGGACACCCAGCTCCTaGTGCTGCTATCCTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGCEQSTPPMLTWWREAVWTPSS*CCYPVR Trigger: TCTCACAGGATAGCAGCAGCAGGAGCTGGGTGTCCA...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCATGTTCCCCAGCTCCATaGGACACAAAGATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AARQLSLAAVPLSRVLHACSPAP*DTKMRA Trigger: GGCCCTCATCTTTGTGTCCCATGGAGCTGGGGAACA...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTTGTTCCCCAGCTCCATaGGACACAAAGATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGCEQSTPPMLTWWREAVCSPAP*DTKMRA Trigger: GGCCCTCATCTTTGTGTCCCATGGAGCTGGGGAACA...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCCTCCTTCACCCGGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKPTDALFLRVLAPLLHPEVLSV*IDQVRQ Trigger: CTGCCTCACCTGGTCAATGCAGACGGACAGTACCTC...CGGGTGAAGGAGGGGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGGTGAAATCAGGACCATaGCAGAAAAGTAGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSADRPCVGVLVPPKPPRVKSGP*QKSRLA Trigger: GGCCAACCTACTTTTCTGGCATGGTCCTGATTTCAC...CCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CAA 72 bp | ACGAGTGGGTCAGAGTTGTACAGGTCAACCTCCGACTaGTTCCGAGACAGCACGCTGGAGTCAATGCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGSELYRSTSD*FRDSTLESMRP Trigger: GGGGCGCATTGACTCCAGCGTGCTGTCTCGGAACAAGTCGGAGGTTGACCTGTACAACTCTGACCCACTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR CAA 72 bp | ACCTTCAGCCCTGCTCGGCAGACGAGTGGGTCAGAGTaGTACAGGTCAACCTCCGACTTGTTCCGAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFSPARQTSGSE*YRSTSDLFRDS Trigger: GCTGTCTCGGAACAAGTCGGAGGTTGACCTGTACAACTCTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGAGAGCCAACTAGTCCTCAATTAGGGGGCTGGGTCCTCGGCAGACCGGTTGCAGCACATCTCTaGCAAAAACTTGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPGEPTSPQLGGWVLGRPVAAHL*QKLGSP Trigger: CGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAAC...CGGTCTGCCGAGGACCCAGCCCCCTAATTGAGGACTAGTTGGCTCTCCTGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTTGGCAGGACAAAATTaGGCAGTTTGGCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRGGSGQLLGPSFPACSALAGQN*AVWQQG Trigger: TCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAA...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGGGTAGTCCTTCTGGATaGTGTCCACGTGTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PYPNSSASCGDGGDCEALGSPSG*CPRVAA Trigger: TGCTGCAACACGTGGACACCATCCAGAAGGACTACC...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CAA 72 bp | ATGGCAGTGTCAGCCTGGGCATTGCTCGCTCCACTCTaGCGACGGCATTCAGCAGCTGTATGCCAAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: MAVSAWALLAPL*RRHSAAVCQST Trigger: TGTGCTTTGGCATACAGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAATGCCCAGGCTGACACTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| CDS-3UTR TCA 90 bp | GCAGACCGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTTTACGTTGCAGCACATCTCTaGCAAAAACTTGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ADRPCVGVLVPPKPPRLYVAAHL*QKLGSP Trigger: CGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAAC...GTAAAGCCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCGGTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCATTGGCAGGACAAAATTaGGCAGTTTGGCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AARQLSLAAVPLSRVLHALAGQN*AVWQQG Trigger: TCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAA...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | TATGCCAAAGCACACCTTCAGCCCTGCTCGGCAGACGAGTGGGTCAGAGTTGTAGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YAKAHLQPCSADEWVRVVEVLSV*IDQVRQ Trigger: CTGCCTCACCTGGTCAATGCAGACGGACAGTACCTC...TACAACTCTGACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGCTTTGGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCAGACCTTCAAAGTCGATaGAGATTCCGGATTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AARQLSLAAVPLSRVLHADLQSR*RFRIGK Trigger: CTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTC...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGACCTTCAAAGTCGATaGAGATTCCGGATTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAARQLSLAAVPLSRVLHDLQSR*RFRIGK Trigger: CTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTC...ATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGGACCTTCAAAGTCGATaGAGATTCCGGATTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPKYPMPVHCCPGFPEQEDLQSR*RFRIGK Trigger: CTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTC...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGCTGCAGCAGCAGGAATaGCAGTGTCAGCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DRTPEVTARPSVKIEVLQLQQQE*QCQPGH Trigger: ATGCCCAGGCTGACACTGCCATTCCTGCTGCTGCAG...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCACACGAGTTTACTTCATaGAGGACGGAGTTGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: AARQLSLAAVPLSRVLHAHEFTS*RTELVT Trigger: AGTGACCAACTCCGTCCTCCATGAAGTAAACTCGTG...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGGACCAGAGGTGAAATCAGGACCATGCCAGAAAAGTAGGTTGGCCTCTACTGTCCGTCTGCATTaGCCAGGTGAGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WQGPEVKSGPCQKSRLASTVRLH*PGEAGP Trigger: AGGACCTGCCTCACCTGGTCAATGCAGACGGACAGT...AGAGGCCAACCTACTTTTCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| CDS-3UTR TCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGGGCAAGGACCAGAGGTaGAATCAGGACCATGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRTPEVTARPSVKIEVLQGKDQR*NQDHAR Trigger: TCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCC...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGACTCCTGAGGTAACAGCAAGGCCCTCCGTAAAGATAGAAGTGCTCCAGGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRTPEVTARPSVKIEVLQEVLSV*IDQVRQ Trigger: CTGCCTCACCTGGTCAATGCAGACGGACAGTACCTC...CTGGAGCACTTCTATCTTTACGGAGGGCCTTGCTGTTACCTCAGGAGTCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CAA 72 bp | GACGTCGGGGTAGTCCTTCTGGATGGTGTCCACGTGTaGCAGCACATCTCTGACAAAAACTTGGAAGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DVGVVLLDGVHV*QHISDKNLEVR Trigger: TCGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAACACGTGGACACCATCCAGAAGGACTACCCCGACGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| 3UTR CAA 72 bp | GCAGCAAGGACCTTCAAAGTCGATGCAGATTCCGGATaGGCAAGGACCAGAGGTGAAATCAGGACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AARTFKVDADSG*ARTRGEIRTMP Trigger: TGGCATGGTCCTGATTTCACCTCTGGTCCTTGCCAATCCGGAATCTGCATCGACTTTGAAGGTCCTTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| CDS-3UTR TCA 90 bp | ATTATTTATTCTTGGTGGCCACATCAAGACGTGGGCTGCTTCTTTGCTCCCTGGCATGGGACACAAAGATaGGGGCCTTGGGTGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIYSWWPHQDVGCFFAPWHGTQR*GPWVCH Trigger: GTGGCACACCCAAGGCCCTCATCTTTGTGTCCCATG...CCAGGGAGCAAAGAAGCAGCCCACGTCTTGATGTGGCCACCAAGAATAAATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| CDS-3UTR GCA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCATTCAGCAGCTGTATaGCAAAGCACACCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSHSAAV*QSTPSA Trigger: GGCTGAAGGTGTGCTTTGGCATACAGCTGCTGAATG...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAACCTCCCGTTGACTTCATCTGGCTTATCAGTTTATCTGATCAGCCGGCTACTGTCCGTCTGCATTaGCCAGGTGAGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKPPVDFIWLISLSDQPATVRLH*PGEAGP Trigger: AGGACCTGCCTCACCTGGTCAATGCAGACGGACAGT...AGCCGGCTGATCAGATAAACTGATAAGCCAGATGAAGTCAACGGGAGGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| CDS-3UTR GCA 90 bp | GTCACAGATCTGAGCACAGTAGTCTGGAATGGTTTTAACTTAATGGAGAGCCAAGCACACCTTCAGCCCTaGTCGGCAGACGAGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSTVVWNGFNLMESQAHLQP*SADEWV Trigger: GACCCACTCGTCTGCCGAGCAGGGCTGAAGGTGTGC...TTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGGTTGTTGGAAAAGCCCACAGATGCTCTGTTCTTGCGGGTTCTGGCTCCCACGAGTTTACTTCATaGAGGACGGAGTTGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SMVVGKAHRCSVLAGSGSHEFTS*RTELVT Trigger: AGTGACCAACTCCGTCCTCCATGAAGTAAACTCGTG...GGAGCCAGAACCCGCAAGAACAGAGCATCTGTGGGCTTTTCCAACAACCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR TCA 90 bp | AAACCTCCCGTTGACTTCATCTGGCTTATCAGTTTATCTGATCAGCCGGCTGACAAATATAACCAGGGCTaGCTGCAGAGCAGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPPVDFIWLISLSDQPADKYNQG*LQSSRE Trigger: CTCTCTGCTGCTCTGCAGTCAGCCCTGGTTATATTT...GTCAGCCGGCTGATCAGATAAACTGATAAGCCAGATGAAGTCAACGGGAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| CDS-3UTR GCA 90 bp | ATTCAGAATTATTTATTCTTGGTGGCCACATCAAGACGTGGGCTGCTTCTTTGCGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQNYLFLVATSRRGLLLCEVLSV*IDQVRQ Trigger: CTGCCTCACCTGGTCAATGCAGACGGACAGTACCTC...GCAAAGAAGCAGCCCACGTCTTGATGTGGCCACCAAGAATAAATAATTCTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| CDS-3UTR GCA 90 bp | GTCACAGATCTGAGCACAGTAGTCTGGAATGGTTTTAACTTAATGGAGAGCCAACTCTCTCCCTCACTCTaGCCATGGCCAACATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSTVVWNGFNLMESQLSPSL*PWPTWS Trigger: TGACCATGTTGGCCATGGGCAGAGTGAGGGAGAGAG...TTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CCA 90 bp | CAAATTCAGAATTATTTATTCTTGGTGGCCACATCAAGACGTGGGCTGCTTCTTTGTTCCCCAGCTCCATaGGACACAAAGATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QIQNYLFLVATSRRGLLLCSPAP*DTKMRA Trigger: GGCCCTCATCTTTGTGTCCCATGGAGCTGGGGAACA...AAGAAGCAGCCCACGTCTTGATGTGGCCACCAAGAATAAATAATTCTGAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| CDS-3UTR CCA 90 bp | GTCACAGATCTGAGCACAGTAGTCTGGAATGGTTTTAACTTAATGGAGAGCCAAGGTAGTCCTTCTGGATaGTGTCCACGTGTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTDLSTVVWNGFNLMESQGSPSG*CPRVAA Trigger: TGCTGCAACACGTGGACACCATCCAGAAGGACTACC...TTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| 3UTR CAA 72 bp | CCCAAGGTCATATTTGGCAGGACAAAATTGAGCAGTTaGGCAGCAAGGACCTTCAAAGTCGATGCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKVIFGRTKLSS*AARTFKVDADS Trigger: GGAATCTGCATCGACTTTGAAGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203608.3 ENSMUST00000203824.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAGAATTATTTATTCTTGGTGGCCACATCAAGACGTGGGCTGCTTCTTTGCGAGAGCATCACAGCATaGTCATGGGCAAATACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQNYLFLVATSRRGLLLCESITA*SWANTS Trigger: GCTGGTATTTGCCCATGACCATGCTGTGATGCTCTC...GCAAAGAAGCAGCCCACGTCTTGATGTGGCCACCAAGAATAAATAATTCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| CDS-3UTR GCA 90 bp | TATAAACAAAACCTCCCGTTGACTTCATCTGGCTTATCAGTTTATCTGATCAGCATAACCAGGGCTGACTaGAGAGCAGCAGAGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: YKQNLPLTSSGLSVYLISITRAD*RAAESI Trigger: GATGCTCTCTGCTGCTCTGCAGTCAGCCCTGGTTAT...GCTGATCAGATAAACTGATAAGCCAGATGAAGTCAACGGGAGGTTTTGTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
||
| CDS-3UTR CAA 90 bp | CCCCAGTTATTGCTGGCGCTAAGTGAGGCCTGGGGGAGGCCTTCAGGCGGGCACTTGCTCGCTCCACTCTaGCGACGGCATTCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQLLLALSEAWGRPSGGHLLAPL*RRHSAA Trigger: AGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAA...GTGCCCGCCTGAAGGCCTCCCCCAGGCCTCACTTAGCGCCAGCAATAACTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | CAATTAGGGGGCTGGGTCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCACAAAGATGAGGGCCTaGGGTGTGCCACTGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLGGWVLGRPTLCGGTGSTKMRA*GVPLGF Trigger: GAAGCCCAGTGGCACACCCAAGGCCCTCATCTTTGT...GGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGACCCAGCCCCCTAATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCGATGCAGATTCCGGATaGGCAAGGACCAGAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GALDSSWALPSLHAVLGPDADSG*ARTRGE Trigger: TTCACCTCTGGTCCTTGCCAATCCGGAATCTGCATC...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGAGAGCCAACTAGTCCTCAATTAGGGGGCTGGGTCCTCGGCAGACCGACAAAGATGAGGGCCTaGGGTGTGCCACTGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPGEPTSPQLGGWVLGRPTKMRA*GVPLGF Trigger: GAAGCCCAGTGGCACACCCAAGGCCCTCATCTTTGT...CGGTCTGCCGAGGACCCAGCCCCCTAATTGAGGACTAGTTGGCTCTCCTGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGACAAAGATGAGGGCCTaGGGTGTGCCACTGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EPKYPMPVHCCPGFPEQETKMRA*GVPLGF Trigger: GAAGCCCAGTGGCACACCCAAGGCCCTCATCTTTGT...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | CAATTAGGGGGCTGGGTCCTCGGCAGACCGACCCTGTGTGGGGGTACTGGTTCCGATGCAGATTCCGGATaGGCAAGGACCAGAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLGGWVLGRPTLCGGTGSDADSG*ARTRGE Trigger: TTCACCTCTGGTCCTTGCCAATCCGGAATCTGCATC...GGAACCAGTACCCCCACACAGGGTCGGTCTGCCGAGGACCCAGCCCCCTAATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTGGGCCCTTTGGCAGGACAAAATaGAGCAGTTTGGCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GALDSSWALPSLHAVLGPFGRTK*SSLAAR Trigger: CCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAA...GGGCCCAAGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCAAAATACCCCATGCCCGTCCACTGCTGTCCAGGGTTCCCTGAGCAGGAGTTGCTCGCTCCACTCTaGCGACGGCATTCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EPKYPMPVHCCPGFPEQELLAPL*RRHSAA Trigger: AGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAA...CTCCTGCTCAGGGAACCCTGGACAGCAGTGGACGGGCATGGGGTATTTTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | CCGTACCCCAATTCCTCTGCATCCTGTGGTGATGGGGGTGACTGTGAAGCCCTGTTGCTCGCTCCACTCTaGCGACGGCATTCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PYPNSSASCGDGGDCEALLLAPL*RRHSAA Trigger: AGCTGCTGAATGCCGTCGCAAGAGTGGAGCGAGCAA...CAGGGCTTCACAGTCACCCCCATCACCACAGGATGCAGAGGAATTGGGGTACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS TCA 90 bp | GTGAGGCAGGTCCTGGTAGGGAACATTCTGTGGAGTTCGCCTGGGTaGACTTGCCTCAGGCATCCTGCAGGGGTCTTTAGGCCCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRQVLVGNILWSSPG*TCLRHPAGVFRPCF Trigger: GAAACAGGGCCTAAAGACCCCTGCAGGATGCCTGAGGCAAGTTCACCCAGGCGAACTCCACAGAATGTTCCCTACCAGGACCTGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGATGTGAGCAGAGCACTCCCCCGATGCTCACATGGTGGAGGGAGGCTGTTTGCCAGAAAAGTAGGTaGGCCTCTCTGCAGCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: AGCEQSTPPMLTWWREAVCQKSR*ASLQPL Trigger: TAGTGGCTGCAGAGAGGCCAACCTACTTTTCTGGCA...AACAGCCTCCCTCCACCATGTGAGCATCGGGGGAGTGCTCTGCTCACATCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCCAGGCAGCTCTCCTTGGCAGCAGTGCCCCTTTCCAGGGTTCTACATGCAGATGCAGATTCCGGATaGGCAAGGACCAGAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AARQLSLAAVPLSRVLHADADSG*ARTRGE Trigger: TTCACCTCTGGTCCTTGCCAATCCGGAATCTGCATC...TGCATGTAGAACCCTGGAAAGGGGCACTGCTGCCAAGGAGAGCTGCCTGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | CGACCCTGTGTGGGGGTACTGGTTCCTCCAAAGCCGCCTAGGCTTTACCCACCCTTTGGCAGGACAAAATaGAGCAGTTTGGCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPCVGVLVPPKPPRLYPPFGRTK*SSLAAR Trigger: CCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAA...GGGTGGGTAAAGCCTAGGCGGCTTTGGAGGAACCAGTACCCCCACACAGGGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGAGGGGGCTCTGGACAGCTCCTGGGCCCTTCCTTCCCTGCATGCAGTGCTTTTGGCAGGACAAAATaGAGCAGTTTGGCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRGGSGQLLGPSFPACSAFGRTK*SSLAAR Trigger: CCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAA...AGCACTGCATGCAGGGAAGGAAGGGCCCAGGAGCTGTCCAGAGCCCCCTCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089449.5 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| CDS TCA 90 bp | CGGGGTAGTCCTTCTGGATGGTGTCCACGTGTTGCAGCACATCTCTaGCAAAAACTTGGAAGTCCGACACCACCATCCTCTCTCCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: RGSPSGWCPRVAAHL*QKLGSPTPPSSLPH Trigger: GTGAGGGAGAGAGGATGGTGGTGTCGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAACACGTGGACACCATCCAGAAGGACTACCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000089449.5 ENSMUST00000113581.8 ENSMUST00000113582.8 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| CDS CCA 90 bp | GTTCCGAGACAGCACGCTGGAGTCAATGCGCCCCAAGGTCATATTTaGCAGGACAAAATTGAGCAGTTTGGCAGCAAGGACCCACAGGTG | + |
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Preference number: 5 (lower is better) Translates to: VPRQHAGVNAPQGHI*QDKIEQFGSKDPQV Trigger: CACCTGTGGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCGTGCTGTCTCGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS TCA 90 bp | CGCTGGAGTCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATTaGGCAGTTTGGCAGCAAGGACCCACAGGTGGAAAGCATACGGGA | + |
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Preference number: 5 (lower is better) Translates to: RWSQCAPRSYLAGQN*AVWQQGPTGGKHTG Trigger: TCCCGTATGCTTTCCACCTGTGGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS GCA 90 bp | TGTGCCACTGGGCTTCCAGTATCTACAAAAGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGCAGGTCCTGGTAGGGAACATTCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: CATGLPVSTKEVLSV*IDQVRQVLVGNILW Trigger: CCACAGAATGTTCCCTACCAGGACCTGCCTCACCTGGTCAATGCAGACGGACAGTACCTCTTTTGTAGATACTGGAAGCCCAGTGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089449.5 ENSMUST00000113581.8 ENSMUST00000113582.8 ENSMUST00000113585.9 ENSMUST00000150180.4 ENSMUST00000163271.8 ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| CDS TCA 90 bp | CACTGGGCTTCCAGTATCTACAAAAGAGGTACTGTCCGTCTGCATTaGCCAGGTGAGGCAGGTCCTGGTAGGGAACATTCTGTGGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: HWASSIYKRGTVRLH*PGEAGPGREHSVEF Trigger: GAACTCCACAGAATGTTCCCTACCAGGACCTGCCTCACCTGGTCAATGCAGACGGACAGTACCTCTTTTGTAGATACTGGAAGCCCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089449.5 ENSMUST00000113581.8 ENSMUST00000113582.8 ENSMUST00000113585.9 ENSMUST00000150180.4 ENSMUST00000163271.8 ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| CDS TCA 90 bp | GTCCTTCAAAGTCGATGCAGATTCCGGATTGGCAAGGACCAGAGGTaGAATCAGGACCATGCCAGAAAAGTAGGTTGGCCTCTCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VLQSRCRFRIGKDQR*NQDHARKVGWPLCS Trigger: GCTGCAGAGAGGCCAACCTACTTTTCTGGCATGGTCCTGATTTCACCTCTGGTCCTTGCCAATCCGGAATCTGCATCGACTTTGAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS CCA 90 bp | TTTGGCAGGACAAAATTGAGCAGTTTGGCAGCAAGGACCCACAGGTaGAAAGCATACGGGATCCAAGTCACTGACACTTCGGCAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FGRTKLSSLAARTHR*KAYGIQVTDTSAAF Trigger: GAAGGCTGCCGAAGTGTCAGTGACTTGGATCCCGTATGCTTTCCACCTGTGGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS-3UTR CAA 90 bp | GAATTATTTATTCTTGGTGGCCACATCAAGACGTGGGCTGCTTCTTTGCTCCCTACAAAGATGAGGGCCTaGGGTGTGCCACTGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ELFILGGHIKTWAASLLPTKMRA*GVPLGF Trigger: GAAGCCCAGTGGCACACCCAAGGCCCTCATCTTTGT...AGGGAGCAAAGAAGCAGCCCACGTCTTGATGTGGCCACCAAGAATAAATAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
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| CDS-3UTR CAA 90 bp | GTCACAGATCTGAGCACAGTAGTCTGGAATGGTTTTAACTTAATGGAGAGCCAATTCGCCTGGGTGAACTaGCCTCAGGCATCCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VTDLSTVVWNGFNLMESQFAWVN*PQASCR Trigger: CCTGCAGGATGCCTGAGGCAAGTTCACCCAGGCGAA...TTGGCTCTCCATTAAGTTAAAACCATTCCAGACTACTGTGCTCAGATCTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163271.8 |
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| CDS TCA 90 bp | CTGGAATATTATCTGCCAAATAAGTCTCACAAATATAACCAGGGCTaGCTGCAGAGCAGCAGAGAGCATCACAGCATGGTCATGGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LEYYLPNKSHKYNQG*LQSSREHHSMVMGK Trigger: TTTGCCCATGACCATGCTGTGATGCTCTCTGCTGCTCTGCAGTCAGCCCTGGTTATATTTGTGAGACTTATTTGGCAGATAATATTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
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| CDS GCA 90 bp | AATATTATCTGCCAAATAAGTCTCACAAATATAACCAGGGCTGACTaGAGAGCAGCAGAGAGCATCACAGCATGGTCATGGGCAAATACC | + |
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Preference number: 5 (lower is better) Translates to: NIICQISLTNITRAD*RAAESITAWSWANT Trigger: GGTATTTGCCCATGACCATGCTGTGATGCTCTCTGCTGCTCTGCAGTCAGCCCTGGTTATATTTGTGAGACTTATTTGGCAGATAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
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| CDS CAA 72 bp | TTGCTGTCGCAAAGCCGGTCAGCAGAACCCTCCGACTaGTTCCGAGACAGCACGCTGGAGTCAATGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LLSQSRSAEPSD*FRDSTLESMRP Trigger: GGGGCGCATTGACTCCAGCGTGCTGTCTCGGAACAAGTCGGAGGGTTCTGCTGACCGGCTTTGCGACAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113582.8 |
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| CDS TCA 72 bp | GTCCTGGTAGGGAACATTCTGTGGAGTTCGCCTGGGTaGACTTGCCTCAGGCATCCTGCAGGGGTCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: VLVGNILWSSPG*TCLRHPAGVFR Trigger: CCTAAAGACCCCTGCAGGATGCCTGAGGCAAGTTCACCCAGGCGAACTCCACAGAATGTTCCCTACCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163271.8 |
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| CDS CCA 72 bp | AGGGCTGACTGCAGAGCAGCAGAGAGCATCACAGCATaGTCATGGGCAAATACCAGCATGTCCAGCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RADCRAAESITA*SWANTSMSSPF Trigger: GAAGGGGCTGGACATGCTGGTATTTGCCCATGACCATGCTGTGATGCTCTCTGCTGCTCTGCAGTCAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
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| CDS GCA 72 bp | GGGCTTCCAGTATCTACAAAAGAGGTACTGTCCGTCTaGATTGACCAGGTGAGGCAGGTCCTGGTAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GLPVSTKEVLSV*IDQVRQVLVGN Trigger: GTTCCCTACCAGGACCTGCCTCACCTGGTCAATGCAGACGGACAGTACCTCTTTTGTAGATACTGGAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089449.5 ENSMUST00000113581.8 ENSMUST00000113582.8 ENSMUST00000113585.9 ENSMUST00000150180.4 ENSMUST00000163271.8 ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| CDS CCA 72 bp | CTCTCTCCCTCACTCTGCCCATGGCCAACATGGTCATaGGCAAATACCAGCATGTCCAGCCCCTTCAACATA | + |
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Preference number: 6 (lower is better) Translates to: LSPSLCPWPTWS*ANTSMSSPFNI Trigger: TATGTTGAAGGGGCTGGACATGCTGGTATTTGCCCATGACCATGTTGGCCATGGGCAGAGTGAGGGAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000089449.5 ENSMUST00000113581.8 ENSMUST00000113582.8 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| CDS CAA 90 bp | ACGCTGGAGTCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATaGAGCAGTTTGGCAGCAAGGACCCACAGGTGGAAAGCATACGGG | + |
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Preference number: 6 (lower is better) Translates to: TLESMRPKVIFGRTK*SSLAARTHRWKAYG Trigger: CCCGTATGCTTTCCACCTGTGGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGACTCCAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS CCA 72 bp | GTGTCCACGTGTTGCAGCACATCTCTGACAAAAACTTaGAAGTCCGACACCACCATCCTCTCTCCCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: VSTCCSTSLTKT*KSDTTILSPSL Trigger: GAGTGAGGGAGAGAGGATGGTGGTGTCGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAACACGTGGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000089449.5 ENSMUST00000113581.8 ENSMUST00000113582.8 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| CDS CAA 72 bp | GGTGTCCACGTGTTGCAGCACATCTCTGACAAAAACTaGGAAGTCCGACACCACCATCCTCTCTCCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: GVHVLQHISDKN*EVRHHHPLSLT Trigger: AGTGAGGGAGAGAGGATGGTGGTGTCGGACTTCCAAGTTTTTGTCAGAGATGTGCTGCAACACGTGGACACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000089449.5 ENSMUST00000113581.8 ENSMUST00000113582.8 ENSMUST00000113585.9 ENSMUST00000163271.8 |
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| CDS CAA 90 bp | TCAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATTGAGCAGTTaGGCAGCAAGGACCCACAGGTGGAAAGCATACGGGATCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SMRPKVIFGRTKLSS*AARTHRWKAYGIQV Trigger: GACTTGGATCCCGTATGCTTTCCACCTGTGGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS TCA 72 bp | CAATGCGCCCCAAGGTCATATTTGGCAGGACAAAATTaGGCAGTTTGGCAGCAAGGACCCACAGGTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QCAPRSYLAGQN*AVWQQGPTGGK Trigger: CTTTCCACCTGTGGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGGGCGCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS CAA 72 bp | CCCAAGGTCATATTTGGCAGGACAAAATTGAGCAGTTaGGCAGCAAGGACCCACAGGTGGAAAGCATACGGG | + |
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Preference number: 6 (lower is better) Translates to: PKVIFGRTKLSS*AARTHRWKAYG Trigger: CCCGTATGCTTTCCACCTGTGGGTCCTTGCTGCCAAACTGCTCAATTTTGTCCTGCCAAATATGACCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS TCA 72 bp | TCCAGTATCTACAAAAGAGGTACTGTCCGTCTGCATTaGCCAGGTGAGGCAGGTCCTGGTAGGGAACATTCT | + |
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Preference number: 6 (lower is better) Translates to: SSIYKRGTVRLH*PGEAGPGREHS Trigger: AGAATGTTCCCTACCAGGACCTGCCTCACCTGGTCAATGCAGACGGACAGTACCTCTTTTGTAGATACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089449.5 ENSMUST00000113581.8 ENSMUST00000113582.8 ENSMUST00000113585.9 ENSMUST00000150180.4 ENSMUST00000163271.8 ENSMUST00000203608.3 ENSMUST00000203824.2 |
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| CDS CCA 72 bp | ACAAAATTGAGCAGTTTGGCAGCAAGGACCCACAGGTaGAAAGCATACGGGATCCAAGTCACTGACACTTCG | + |
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Preference number: 6 (lower is better) Translates to: TKLSSLAARTHR*KAYGIQVTDTS Trigger: CGAAGTGTCAGTGACTTGGATCCCGTATGCTTTCCACCTGTGGGTCCTTGCTGCCAAACTGCTCAATTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS GCA 72 bp | ACTTCGGCAGCCTTCTCAAGAGAGGTCTTCGTGATGTaGAATTTGTCCTTCAAAGTCGATGCAGATTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: TSAAFSREVFVM*NLSFKVDADSG Trigger: TCCGGAATCTGCATCGACTTTGAAGGACAAATTGCACATCACGAAGACCTCTCTTGAGAAGGCTGCCGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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| CDS GCA 72 bp | TGCCAAATAAGTCTCACAAATATAACCAGGGCTGACTaGAGAGCAGCAGAGAGCATCACAGCATGGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: CQISLTNITRAD*RAAESITAWSW Trigger: CCATGACCATGCTGTGATGCTCTCTGCTGCTCTGCAGTCAGCCCTGGTTATATTTGTGAGACTTATTTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150180.4 |
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| CDS CAA 72 bp | TGCAATTTGTCCTTCAAAGTCGATGCAGATTCCGGATaGGCAAGGACCAGAGGTGAAATCAGGACCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: CNLSFKVDADSG*ARTRGEIRTMP Trigger: TGGCATGGTCCTGATTTCACCTCTGGTCCTTGCCAATCCGGAATCTGCATCGACTTTGAAGGACAAATTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113581.8 |
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