Pregenerated sensors for MGL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040950Ensembl transcript IDs: ENSMUST00000041550.12, ENSMUST00000108584.2, ENSMUST00000165951.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCAAAGTGGCAGGTTCCAAGCAGGTTTCAGGCTaGGGGAGGGGAGACTACACA | + |
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Preference number: 2 (lower is better) Translates to: SSRKVSTCVALNSKVAGSKQVSG*GRGDYT Trigger: TGTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTT...GGAACCTGCCACTTTGCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGCGTGATAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGGTTTTGACAATCACAGGCTaGACACTGTACACAGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: SGRDRTNEQEAPPLSKQVLTITG*TLYTVS Trigger: TGACACTGTGTACAGTGTTCAGCCTGTGATTGTCAA...AACCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTATCACGCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | AGTGGGCGTGATAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGGTTTTGTGGGGAGTGGGCTaGGCTGGCTTTGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGRDRTNEQEAPPLSKQVLWGVG*AGFAQL Trigger: GAGCTGGGCAAAGCCAGCTCAGCCCACTCCCCACAA...AACCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTATCACGCCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | AGTGGGCGTGATAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGGTTGAGAACAGGAGGAGGTaGGTCCAAGAGAGGATGCGC | + |
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Preference number: 4 (lower is better) Translates to: SGRDRTNEQEAPPLSKQVENRRR*VQERMR Trigger: GCGCATCCTCTCTTGGACCCACCTCCTCCTGTTCTC...AACCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTATCACGCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | AGTGGGCGTGATAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGGTTATCCAATCACGGAGATaGCCACCAGTAGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGRDRTNEQEAPPLSKQVIQSRR*PPVAGG Trigger: GCCTCCTGCTACTGGTGGTCATCTCCGTGATTGGAT...AACCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTATCACGCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCGAATAATCTCTGGTCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCCCGAGCCATTGTTCTTaGGGTTGGCCAGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PNNLWSSRKVSTCVALNSPSHCS*GWPAGT Trigger: CGTGCCAGCTGGCCAACCTCAAGAACAATGGCTCGG...GCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGACCAGAGATTATTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCTCATGCTCCGTCCAGTaGAGCGGGCAGCAGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVSCSVQ*SGQQAT Trigger: AGTGGCCTGCTGCCCGCTTCACTGGACGGAGCATGA...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATTCATGCTCCGTCCAGTaGAGCGGGCAGCAGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYSCSVQ*SGQQAT Trigger: AGTGGCCTGCTGCCCGCTTCACTGGACGGAGCATGA...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | TCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCAAAGTGGCAGGTTCCTTGACCACCACCAGGTaGGAATTCTCCAGCCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRKVSTCVALNSKVAGSLTTTR*EFSSRQ Trigger: CTGCCGGCTGGAGAATTCTCACCTGGTGGTGGTCAA...GGAACCTGCCACTTTGCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | TCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCAAAGTGGCAGGTTCCGCTCCTCCAGGGAGTTaGCCACCACCAGGTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSRKVSTCVALNSKVAGSAPPGS*PPPGEN Trigger: ATTCTCACCTGGTGGTGGTCAACTCCCTGGAGGAGC...GGAACCTGCCACTTTGCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCTTGTGGGGAGTGGGCTaGGCTGGCTTTGCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVLWGVG*AGFAQL Trigger: GAGCTGGGCAAAGCCAGCTCAGCCCACTCCCCACAA...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATTTGTGGGGAGTGGGCTaGGCTGGCTTTGCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYLWGVG*AGFAQL Trigger: GAGCTGGGCAAAGCCAGCTCAGCCCACTCCCCACAA...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | AGTGGGCGTGATAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGGTTAGAGAAGTCACCTTCTaGCTCAAGTCTCGGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGRDRTNEQEAPPLSKQVREVTF*LKSRPA Trigger: GGCAGGCCGAGACTTGAGCCAGAAGGTGACTTCTCT...AACCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTATCACGCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | CCGAATAATCTCTGGTCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCCGCCAGGGCCCATTTTaGTCCGTTAGGCCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PNNLWSSRKVSTCVALNSRQGPF*SVRPIQ Trigger: CTGGATGGGCCTAACGGACCAAAATGGGCCCTGGCG...GCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGACCAGAGATTATTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | TCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCAAAGTGGCAGGTTCCGGGAGTGGGCTGAGCTaGCTTTGCCCAGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSRKVSTCVALNSKVAGSGSGLS*LCPALF Trigger: AAACAGAGCTGGGCAAAGCCAGCTCAGCCCACTCCC...GGAACCTGCCACTTTGCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCCGAGCCATTGTTCTTaGGGTTGGCCAGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYPSHCS*GWPAGT Trigger: CGTGCCAGCTGGCCAACCTCAAGAACAATGGCTCGG...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCGAATAATCTCTGGTCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCGCTCCTCCAGGGAGTTaGCCACCACCAGGTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PNNLWSSRKVSTCVALNSAPPGS*PPPGEN Trigger: ATTCTCACCTGGTGGTGGTCAACTCCCTGGAGGAGC...GCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGACCAGAGATTATTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCGCCAGGGCCCATTTTaGTCCGTTAGGCCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYRQGPF*SVRPIQ Trigger: CTGGATGGGCCTAACGGACCAAAATGGGCCCTGGCG...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGCCGAGCCATTGTTCTTaGGGTTGGCCAGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRPSHCS*GWPAGT Trigger: CGTGCCAGCTGGCCAACCTCAAGAACAATGGCTCGG...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATTTGACCACCACCAGGTaGGAATTCTCCAGCCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYLTTTR*EFSSRQ Trigger: CTGCCGGCTGGAGAATTCTCACCTGGTGGTGGTCAA...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATGCTCCTCCAGGGAGTTaGCCACCACCAGGTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYAPPGS*PPPGEN Trigger: ATTCTCACCTGGTGGTGGTCAACTCCCTGGAGGAGC...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR GCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGGGGTCCAAGAGAGGATaGGCCACAGGAAGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRGSKRG*ATGRTG Trigger: CCCAGTCCTTCCTGTGGCGCATCCTCTCTTGGACCC...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR GCA 90 bp | CCGAATAATCTCTGGTCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCGGGCTGAGCTGGCTTTaGCCAGCTCTGTTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PNNLWSSRKVSTCVALNSGLSWL*PALFHR Trigger: TCTGTGAAACAGAGCTGGGCAAAGCCAGCTCAGCCC...GCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGACCAGAGATTATTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | CCGAATAATCTCTGGTCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCTTGAGGTTGGCCAGCTaGCACGTCAAGGCCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: PNNLWSSRKVSTCVALNSLRLAS*HVKAFK Trigger: CTTGAAGGCCTTGACGTGCCAGCTGGCCAACCTCAA...GCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGACCAGAGATTATTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCGGGAGTGGGCTGAGCTaGCTTTGCCCAGCTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVGSGLS*LCPALF Trigger: AAACAGAGCTGGGCAAAGCCAGCTCAGCCCACTCCC...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCATCCAATCACGGAGATaGCCACCAGTAGCAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVIQSRR*PPVAGG Trigger: GCCTCCTGCTACTGGTGGTCATCTCCGTGATTGGAT...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATATCCAATCACGGAGATaGCCACCAGTAGCAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYIQSRR*PPVAGG Trigger: GCCTCCTGCTACTGGTGGTCATCTCCGTGATTGGAT...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGTTGACCACCACCAGGTaGGAATTCTCCAGCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRLTTTR*EFSSRQ Trigger: CTGCCGGCTGGAGAATTCTCACCTGGTGGTGGTCAA...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR TCA 90 bp | AGTGGGCGTGATAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGGTTGTGGCCTCCAATTCTTaGAACCTTTGTCAAAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SGRDRTNEQEAPPLSKQVVASNS*NLCQSR Trigger: CCGACTTTGACAAAGGTTTCAAGAATTGGAGGCCAC...AACCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTATCACGCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041550.12 |
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| CDS-3UTR GCA 90 bp | TCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCAAAGTGGCAGGTTCCTCTGTTTTGAGAGCCTaGTCCCTCTTCTCCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SSRKVSTCVALNSKVAGSSVLRA*SLFSSV Trigger: CACACTGGAGAAGAGGGAGCAGGCTCTCAAAACAGA...GGAACCTGCCACTTTGCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
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| CDS-3UTR GCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCGGGCTGAGCTGGCTTTaGCCAGCTCTGTTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVGLSWL*PALFHR Trigger: TCTGTGAAACAGAGCTGGGCAAAGCCAGCTCAGCCC...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATGGGCTGAGCTGGCTTTaGCCAGCTCTGTTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYGLSWL*PALFHR Trigger: TCTGTGAAACAGAGCTGGGCAAAGCCAGCTCAGCCC...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATAGAGAAGTCACCTTCTaGCTCAAGTCTCGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYREVTF*LKSRPA Trigger: GGCAGGCCGAGACTTGAGCCAGAAGGTGACTTCTCT...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGAGAAGTCACCTTCTaGCTCAAGTCTCGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVREVTF*LKSRPA Trigger: GGCAGGCCGAGACTTGAGCCAGAAGGTGACTTCTCT...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATTTGAGGTTGGCCAGCTaGCACGTCAAGGCCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYLRLAS*HVKAFK Trigger: CTTGAAGGCCTTGACGTGCCAGCTGGCCAACCTCAA...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGGGGAGTGGGCTGAGCTaGCTTTGCCCAGCTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRGSGLS*LCPALF Trigger: AAACAGAGCTGGGCAAAGCCAGCTCAGCCCACTCCC...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | CCGAATAATCTCTGGTCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCCGCCACAGGAAGGACTaGGAAGGAACTGTTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PNNLWSSRKVSTCVALNSRHRKD*EGTVRA Trigger: TGCTCTAACAGTTCCTTCCCAGTCCTTCCTGTGGCG...GCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGACCAGAGATTATTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165951.8 |
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| CDS-3UTR GCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCCCCTCTTCTCCAGTGTaGTCTCCAGAGAAGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVPSSPV*SPEKSP Trigger: AGGTGACTTCTCTGGAGAGCACACTGGAGAAGAGGG...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCCCTCTTCTCCAGTGTaGTCTCCAGAGAAGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYPSSPV*SPEKSP Trigger: AGGTGACTTCTCTGGAGAGCACACTGGAGAAGAGGG...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCCGAAGTTGTCAGCCCTaGAGTCCAGGGACTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVRSCQP*SPGTGI Trigger: AATTCCAGTCCCTGGACTCCAGGGCTGACAACTTCG...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR CCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGTTGAGGTTGGCCAGCTaGCACGTCAAGGCCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRLRLAS*HVKAFK Trigger: CTTGAAGGCCTTGACGTGCCAGCTGGCCAACCTCAA...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR GCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGCCCTCTTCTCCAGTGTaGTCTCCAGAGAAGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRPSSPV*SPEKSP Trigger: AGGTGACTTCTCTGGAGAGCACACTGGAGAAGAGGG...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS-3UTR GCA 90 bp | TCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCAAAGTGGCAGGTTCCTTCTGTAGAAAATTCTaGTCCTCCAGGGAGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSRKVSTCVALNSKVAGSFCRKF*SSRELT Trigger: GGTCAACTCCCTGGAGGAGCAGAATTTTCTACAGAA...GGAACCTGCCACTTTGCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
||
| CDS-3UTR CCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCCGCCACAGGAAGGACTaGGAAGGAATTAGAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVRHRKD*EGIRAN Trigger: GTTTGCTCTAATTCCTTCCCAGTCCTTCCTGTGGCG...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 |
||
| CDS-3UTR CCA 90 bp | CCGAATAATCTCTGGTCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCCTGGAGTCCAGGGACTaGAATTCAGCCTTTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNNLWSSRKVSTCVALNSLESRD*NSAFIL Trigger: CAAGATAAAGGCTGAATTCCAGTCCCTGGACTCCAG...GCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGACCAGAGATTATTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGCGAAGTTGTCAGCCCTaGAGTCCAGGGACTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRRSCQP*SPGTGI Trigger: AATTCCAGTCCCTGGACTCCAGGGCTGACAACTTCG...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCCATTTCTCATCTCCTaGTTTTTCTCTTCCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYPFLIS*FFSSRS Trigger: GGAGCGGGAAGAGAAAAACCAGGAGATGAGAAATGG...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCCTGGAGTCCAGGGACTaGAATTCAGCCTTTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVLESRD*NSAFIL Trigger: CAAGATAAAGGCTGAATTCCAGTCCCTGGACTCCAG...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR GCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCGAAAATAAAGAACTGTaGGCTCCAGATCTGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVENKEL*APDLAI Trigger: GATGGCCAGATCTGGAGCGCACAGTTCTTTATTTTC...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGCCATTTCTCATCTCCTaGTTTTTCTCTTCCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRPFLIS*FFSSRS Trigger: GGAGCGGGAAGAGAAAAACCAGGAGATGAGAAATGG...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCTGGTGTTGTCTAAAATaGCTCTTAGGGTGCCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVWCCLK*LLGCLG Trigger: ACCTAGGCACCCTAAGAGCCATTTTAGACAACACCA...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGCTGGAGTCCAGGGACTaGAATTCAGCCTTTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRLESRD*NSAFIL Trigger: CAAGATAAAGGCTGAATTCCAGTCCCTGGACTCCAG...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCCACTTTCAGAGAACTaGTCCCTTTTTCGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPRWWRYQDRVITNVRYPLSEN*SLFRSC Trigger: ACAACTTCGAAAAAGGGATCAGTTCTCTGAAAGTGG...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR TCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCCCACTTTCAGAGAACTaGTCCCTTTTTCGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVPLSEN*SLFRSC Trigger: ACAACTTCGAAAAAGGGATCAGTTCTCTGAAAGTGG...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGTTCTGTAGAAAATTCTaGTCCTCCAGGGAGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRFCRKF*SSRELT Trigger: GGTCAACTCCCTGGAGGAGCAGAATTTTCTACAGAA...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGGAAAATAAAGAACTGTaGGCTCCAGATCTGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRWWRYQDRVITNVRYLRENKEL*APDLAI Trigger: GATGGCCAGATCTGGAGCGCACAGTTCTTTATTTTC...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CCA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCTCCCGCTCCAAGTTCTaGAAGTTTTCATATCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KHPSPRWWRYQDRVITNVSRSKF*KFSYLI Trigger: AATGAGATATGAAAACTTCCAGAACTTGGAGCGGGA...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
||
| CDS TCA 90 bp | CCGTCCAGTGAAGCGGGCAGCAGGCCACTTCCGAGCCATTGTTCTTaGGGTTGGCCAGCTGGCACGTCAAGGCCTTCAAGTCTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSEAGSRPLPSHCS*GWPAGTSRPSSLSP Trigger: TGGAGACAGACTTGAAGGCCTTGACGTGCCAGCTGGCCAACCTCAAGAACAATGGCTCGGAAGTGGCCTGCTGCCCGCTTCACTGGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS TCA 90 bp | GCATATGTCCATGCCAGTTATCCGGCTGCAGTGGCCTCCAATTCTTaGAACCTTTGTCAAAGTCGGTCCCATCCACCCATCGCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AYVHASYPAAVASNS*NLCQSRSHPPIARA Trigger: GGCCCTGGCGATGGGTGGATGGGACCGACTTTGACAAAGGTTTCAAGAATTGGAGGCCACTGCAGCCGGATAACTGGCATGGACATATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041550.12 |
||
| CDS-3UTR CAA 90 bp | TCCAGTAGAAAGGTGAGCACGTGTGTGGCTCTGAACAGCAAAGTGGCAGGTTCCTGGGCTGAGCTGGCTTaGCCCAGCTCTGTTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRKVSTCVALNSKVAGSWAELA*PSSVSQ Trigger: CTGTGAAACAGAGCTGGGCAAAGCCAGCTCAGCCCA...GGAACCTGCCACTTTGCTGTTCAGAGCCACACACGTGCTCACCTTTCTACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000165951.8 |
||
| CDS TCA 90 bp | CCTGCAGTTCCTGCCTGTGATCCTCCACATCCACTTTCAGAGAACTaGTCCCTTTTTCGAAGTTGTCAGCCCTGGAGTCCAGGGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAVPACDPPHPLSEN*SLFRSCQPWSPGTG Trigger: TCCAGTCCCTGGACTCCAGGGCTGACAACTTCGAAAAAGGGATCAGTTCTCTGAAAGTGGATGTGGAGGATCACAGGCAGGAACTGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCTGGGCTGAGCTGGCTTaGCCCAGCTCTGTTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KHPSPRWWRYQDRVITNVWAELA*PSSVSQ Trigger: CTGTGAAACAGAGCTGGGCAAAGCCAGCTCAGCCCA...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS CCA 90 bp | CAGCCCTGGAGTCCAGGGACTGGAATTCAGCCTTTATCTTGGAGGTaGTGTTGTCTAAAATGGCTCTTAGGGTGCCTAGGTCCCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QPWSPGTGIQPLSWR*CCLKWLLGCLGPSL Trigger: TAAGGAGGGACCTAGGCACCCTAAGAGCCATTTTAGACAACACCACCTCCAAGATAAAGGCTGAATTCCAGTCCCTGGACTCCAGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS CCA 90 bp | AGTTGTCAGCCCTGGAGTCCAGGGACTGGAATTCAGCCTTTATCTTaGAGGTGGTGTTGTCTAAAATGGCTCTTAGGGTGCCTAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SCQPWSPGTGIQPLS*RWCCLKWLLGCLGP Trigger: GGGACCTAGGCACCCTAAGAGCCATTTTAGACAACACCACCTCCAAGATAAAGGCTGAATTCCAGTCCCTGGACTCCAGGGCTGACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGTGGGCTGAGCTGGCTTaGCCCAGCTCTGTTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PRWWRYQDRVITNVRYLRWAELA*PSSVSQ Trigger: CTGTGAAACAGAGCTGGGCAAAGCCAGCTCAGCCCA...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS CCA 90 bp | AGCTGGCACGTCAAGGCCTTCAAGTCTGTCTCCAGCTGTTGTACATaGTCGGTTAAATCAGACAGATCTGTTTTGAGAGCCTGCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SWHVKAFKSVSSCCT*SVKSDRSVLRACSL Trigger: GAGGGAGCAGGCTCTCAAAACAGATCTGTCTGATTTAACCGACCATGTACAACAGCTGGAGACAGACTTGAAGGCCTTGACGTGCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATATCCCTTTTTCGAAGTaGTCAGCCCTGGAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPRWWRYQDRVITNVRYIPFSK*SALESR Trigger: CCTGGACTCCAGGGCTGACAACTTCGAAAAAGGGAT...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGCGTGATAGAACGAATGAGCAGGAAGCTCCACCCCTGAGCAAGCAGGTTCAATTCTTGAAACCTTaGTCAAAGTCGGTCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SGRDRTNEQEAPPLSKQVQFLKP*SKSVPS Trigger: GGATGGGACCGACTTTGACAAAGGTTTCAAGAATTG...AACCTGCTTGCTCAGGGGTGGAGCTTCCTGCTCATTCGTTCTATCACGCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041550.12 |
||
| CDS CCA 90 bp | GTGTTGTCTAAAATGGCTCTTAGGGTGCCTAGGTCCCTCCTTAACTaGGAATTTTGGGATCCAATCACGGAGATGACCACCAGTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLSKMALRVPRSLLN*EFWDPITEMTTSSR Trigger: CCTGCTACTGGTGGTCATCTCCGTGATTGGATCCCAAAATTCCCAGTTAAGGAGGGACCTAGGCACCCTAAGAGCCATTTTAGACAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGATCCCTTTTTCGAAGTaGTCAGCCCTGGAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRWWRYQDRVITNVRYLRIPFSK*SALESR Trigger: CCTGGACTCCAGGGCTGACAACTTCGAAAAAGGGAT...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS TCA 90 bp | TCTCCAGCTGTTGTACATGGTCGGTTAAATCAGACAGATCTGTTTTaGGAGCCTGCTCCCTCTTCTCCAGTGTGCTCTCCAGAGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPAVVHGRLNQTDLF*EPAPSSPVCSPEKS Trigger: TGACTTCTCTGGAGAGCACACTGGAGAAGAGGGAGCAGGCTCTCAAAACAGATCTGTCTGATTTAACCGACCATGTACAACAGCTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS GCA 90 bp | TGTTGTACATGGTCGGTTAAATCAGACAGATCTGTTTTGAGAGCCTaGTCCCTCTTCTCCAGTGTGCTCTCCAGAGAAGTCACCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCTWSVKSDRSVLRA*SLFSSVLSREVTFW Trigger: CCAGAAGGTGACTTCTCTGGAGAGCACACTGGAGAAGAGGGAGCAGGCTCTCAAAACAGATCTGTCTGATTTAACCGACCATGTACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATACGTACTTGAAACCTTaGTCAAAGTCGGTCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRWWRYQDRVITNVRYTYLKP*SKSVPS Trigger: GGATGGGACCGACTTTGACAAAGGTTTCAAGTACGT...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGTGGCCTCCAATTCTaGAAACCTTTGTCAAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KHPSPRWWRYQDRVITNVSGLQF*KPLSKS Trigger: CGACTTTGACAAAGGTTTCAAGAATTGGAGGCCACT...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041550.12 |
||
| CDS-3UTR CAA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGACGTACTTGAAACCTTaGTCAAAGTCGGTCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PRWWRYQDRVITNVRYLRTYLKP*SKSVPS Trigger: GGATGGGACCGACTTTGACAAAGGTTTCAAGTACGT...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | AAACACCCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCCTGTTAGAGCAAACTTaGGAGACTCCATTCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KHPSPRWWRYQDRVITNVLLEQT*ETPFLL Trigger: AAGGAGGAATGGAGTCTCCAAAGTTTGCTCTAACAG...GACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGGGTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165951.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATGAATTAGAGCAAACTTaGGAGACTCCATTCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSPRWWRYQDRVITNVRYELEQT*ETPFLL Trigger: AAGGAGGAATGGAGTCTCCAAAGTTTGCTCTAATTC...ATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGGGGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGATGGTGGAGATACCAAGATAGAGTGATTACCAACGTCAGGTATCTGAGGGAATTAGAGCAAACTTaGGAGACTCCATTCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRWWRYQDRVITNVRYLRELEQT*ETPFLL Trigger: AAGGAGGAATGGAGTCTCCAAAGTTTGCTCTAATTC...CCTCAGATACCTGACGTTGGTAATCACTCTATCTTGGTATCTCCACCATCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 |
||
| CDS TCA 72 bp | GAAGCGGGCAGCAGGCCACTTCCGAGCCATTGTTCTTaGGGTTGGCCAGCTGGCACGTCAAGGCCTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: EAGSRPLPSHCS*GWPAGTSRPSS Trigger: ACTTGAAGGCCTTGACGTGCCAGCTGGCCAACCTCAAGAACAATGGCTCGGAAGTGGCCTGCTGCCCGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS CAA 72 bp | GGGCAGCAGGCCACTTCCGAGCCATTGTTCTTGAGGTaGGCCAGCTGGCACGTCAAGGCCTTCAAGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GQQATSEPLFLR*ASWHVKAFKSV Trigger: GACAGACTTGAAGGCCTTGACGTGCCAGCTGGCCAACCTCAAGAACAATGGCTCGGAAGTGGCCTGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS GCA 72 bp | GCCACGACTTCTCAGACTCAGAGAACCAATAGCAGCTaGCTTCATGCTCCGTCCAGTGAAGCGGGCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ATTSQTQRTNSS*LHAPSSEAGSR Trigger: CCTGCTGCCCGCTTCACTGGACGGAGCATGAAGGCAGCTGCTATTGGTTCTCTGAGTCTGAGAAGTCGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS CCA 72 bp | CTCTTCTCCAGTGTGCTCTCCAGAGAAGTCACCTTCTaGCTCAAGTCTCGGCCTGCCTGCAGTTCCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFSSVLSREVTF*LKSRPACSSCL Trigger: CAGGCAGGAACTGCAGGCAGGCCGAGACTTGAGCCAGAAGGTGACTTCTCTGGAGAGCACACTGGAGAAGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS CCA 72 bp | GCCACTTCCGAGCCATTGTTCTTGAGGTTGGCCAGCTaGCACGTCAAGGCCTTCAAGTCTGTCTCCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ATSEPLFLRLAS*HVKAFKSVSSC Trigger: ACAGCTGGAGACAGACTTGAAGGCCTTGACGTGCCAGCTGGCCAACCTCAAGAACAATGGCTCGGAAGTGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS CAA 72 bp | GGAGCAAGCTGTAGGCGACACACGTACTTGAAACCTTaGTCAAAGTCGGTCCCATCCACCCATCGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GASCRRHTYLKP*SKSVPSTHRQG Trigger: GCCCTGGCGATGGGTGGATGGGACCGACTTTGACAAAGGTTTCAAGTACGTGTGTCGCCTACAGCTTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108584.2 ENSMUST00000165951.8 |
||
| CDS CAA 90 bp | AGCATATGTCCATGCCAGTTATCCGGCTGCAGTGGCCTCCAATTCTaGAAACCTTTGTCAAAGTCGGTCCCATCCACCCATCGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SICPCQLSGCSGLQF*KPLSKSVPSTHRQG Trigger: GCCCTGGCGATGGGTGGATGGGACCGACTTTGACAAAGGTTTCAAGAATTGGAGGCCACTGCAGCCGGATAACTGGCATGGACATATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041550.12 |
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| CDS TCA 72 bp | GGTAGAGGGGAGCAAGCTGTAGGCGACACACGTACTTaGAACCTTTGTCAAAGTCGGTCCCATCCACCCATC | + |
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Preference number: 6 (lower is better) Translates to: GRGEQAVGDTRT*NLCQSRSHPPI Trigger: GATGGGTGGATGGGACCGACTTTGACAAAGGTTTCAAGTACGTGTGTCGCCTACAGCTTGCTCCCCTCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS CAA 90 bp | CGCCAGGGCCCATTTTGGTCCGTTAGGCCCATCCAGCTAAGCACATaGGCTAAGCGATTCTGTAGAAAATTCTGCTCCTCCAGGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: RQGPFWSVRPIQLST*AKRFCRKFCSSREL Trigger: CAACTCCCTGGAGGAGCAGAATTTTCTACAGAATCGCTTAGCCAATGTGCTTAGCTGGATGGGCCTAACGGACCAAAATGGGCCCTGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS TCA 72 bp | CATGCCAGTTATCCGGCTGCAGTGGCCTCCAATTCTTaGAACCTTTGTCAAAGTCGGTCCCATCCACCCATC | + |
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Preference number: 6 (lower is better) Translates to: HASYPAAVASNS*NLCQSRSHPPI Trigger: GATGGGTGGATGGGACCGACTTTGACAAAGGTTTCAAGAATTGGAGGCCACTGCAGCCGGATAACTGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041550.12 |
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| CDS CCA 72 bp | CTTAGGGTGCCTAGGTCCCTCCTTAACTGGGAATTTTaGGATCCAATCACGGAGATGACCACCAGTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRVPRSLLNWEF*DPITEMTTSSR Trigger: CCTGCTACTGGTGGTCATCTCCGTGATTGGATCCCAAAATTCCCAGTTAAGGAGGGACCTAGGCACCCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS CAA 72 bp | CCATGCCAGTTATCCGGCTGCAGTGGCCTCCAATTCTaGAAACCTTTGTCAAAGTCGGTCCCATCCACCCAT | + |
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Preference number: 6 (lower is better) Translates to: PCQLSGCSGLQF*KPLSKSVPSTH Trigger: ATGGGTGGATGGGACCGACTTTGACAAAGGTTTCAAGAATTGGAGGCCACTGCAGCCGGATAACTGGCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041550.12 |
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| CDS CAA 90 bp | AAGTTGTCAGCCCTGGAGTCCAGGGACTGGAATTCAGCCTTTATCTaGGAGGTGGTGTTGTCTAAAATGGCTCTTAGGGTGCCTAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: KLSALESRDWNSAFI*EVVLSKMALRVPRS Trigger: GGACCTAGGCACCCTAAGAGCCATTTTAGACAACACCACCTCCAAGATAAAGGCTGAATTCCAGTCCCTGGACTCCAGGGCTGACAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS TCA 72 bp | CCTGCCTGTGATCCTCCACATCCACTTTCAGAGAACTaGTCCCTTTTTCGAAGTTGTCAGCCCTGGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PACDPPHPLSEN*SLFRSCQPWSP Trigger: TGGACTCCAGGGCTGACAACTTCGAAAAAGGGATCAGTTCTCTGAAAGTGGATGTGGAGGATCACAGGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS CAA 72 bp | GCCCTGGAGTCCAGGGACTGGAATTCAGCCTTTATCTaGGAGGTGGTGTTGTCTAAAATGGCTCTTAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: ALESRDWNSAFI*EVVLSKMALRV Trigger: CACCCTAAGAGCCATTTTAGACAACACCACCTCCAAGATAAAGGCTGAATTCCAGTCCCTGGACTCCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS CAA 90 bp | GTCTCCAGCTGTTGTACATGGTCGGTTAAATCAGACAGATCTGTTTaGAGAGCCTGCTCCCTCTTCTCCAGTGTGCTCTCCAGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VSSCCTWSVKSDRSV*RACSLFSSVLSREV Trigger: GACTTCTCTGGAGAGCACACTGGAGAAGAGGGAGCAGGCTCTCAAAACAGATCTGTCTGATTTAACCGACCATGTACAACAGCTGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS GCA 72 bp | TGGTCGGTTAAATCAGACAGATCTGTTTTGAGAGCCTaGTCCCTCTTCTCCAGTGTGCTCTCCAGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: WSVKSDRSVLRA*SLFSSVLSREV Trigger: GACTTCTCTGGAGAGCACACTGGAGAAGAGGGAGCAGGCTCTCAAAACAGATCTGTCTGATTTAACCGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS GCA 72 bp | CTGCAGTGGCCTCCAATTCCTGAAAATAAAGAACTGTaGGCTCCAGATCTGGCCATCAGCCATGTTACCAGA | + |
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Preference number: 6 (lower is better) Translates to: LQWPPIPENKEL*APDLAISHVTR Trigger: TCTGGTAACATGGCTGATGGCCAGATCTGGAGCGCACAGTTCTTTATTTTCAGGAATTGGAGGCCACTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS GCA 72 bp | TCTTGGAGGTGGTGTTGTCTAAAATGGCTCTTAGGGTaGCTAGGTCCCTCCTTAACTGGGAATTTTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: SWRWCCLKWLLG*LGPSLTGNFGI Trigger: GATCCCAAAATTCCCAGTTAAGGAGGGACCTAGGCACCCTAAGAGCCATTTTAGACAACACCACCTCCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS CAA 72 bp | TGTTGTACATGGTCGGTTAAATCAGACAGATCTGTTTaGAGAGCCTGCTCCCTCTTCTCCAGTGTGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CCTWSVKSDRSV*RACSLFSSVLS Trigger: GGAGAGCACACTGGAGAAGAGGGAGCAGGCTCTCAAAACAGATCTGTCTGATTTAACCGACCATGTACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS CAA 72 bp | CCATTTTGGTCCGTTAGGCCCATCCAGCTAAGCACATaGGCTAAGCGATTCTGTAGAAAATTCTGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PFWSVRPIQLST*AKRFCRKFCSS Trigger: GGAGGAGCAGAATTTTCTACAGAATCGCTTAGCCAATGTGCTTAGCTGGATGGGCCTAACGGACCAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS CCA 72 bp | GTCAAGGCCTTCAAGTCTGTCTCCAGCTGTTGTACATaGTCGGTTAAATCAGACAGATCTGTTTTGAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: VKAFKSVSSCCT*SVKSDRSVLRA Trigger: GGCTCTCAAAACAGATCTGTCTGATTTAACCGACCATGTACAACAGCTGGAGACAGACTTGAAGGCCTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 ENSMUST00000165951.8 |
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| CDS CAA 72 bp | GCCACAGGAAGGACTGGGAAGGAATTAGAGCAAACTTaGGAGACTCCATTCCTCCTTTCTTGTCACCATTTC | + |
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Preference number: 6 (lower is better) Translates to: ATGRTGKELEQT*ETPFLLSCHHF Trigger: GAAATGGTGACAAGAAAGGAGGAATGGAGTCTCCAAAGTTTGCTCTAATTCCTTCCCAGTCCTTCCTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041550.12 ENSMUST00000108584.2 |
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| CDS CAA 72 bp | ACAGGAAGGACTGGGAAGGAACTGTTAGAGCAAACTTaGGAGACTCCATTCCTCCTTTCTTGTCACCATTTC | + |
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Preference number: 6 (lower is better) Translates to: TGRTGKELLEQT*ETPFLLSCHHF Trigger: GAAATGGTGACAAGAAAGGAGGAATGGAGTCTCCAAAGTTTGCTCTAACAGTTCCTTCCCAGTCCTTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165951.8 |
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