Pregenerated sensors for MGAT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036155Ensembl transcript IDs: ENSMUST00000038361.11, ENSMUST00000171405.2
Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TGCTGTTCAGCTAGGCAGAAGCTCCTCCTGGCCACAGGGAGGCGCTaGGCAGCAGCCGCCGGCCAGGAAGTCTACTCTACCAGCTGGGGC | + |
Preference number: 1 (lower is better) Translates to: CCSARQKLLLATGRR*AAAAGQEVYSTSWG Trigger: GCCCCAGCTGGTAGAGTAGACTTCCTGGCCGGCGGCTGCTGCCCAGCGCCTCCCTGTGGCCAGGAGGAGCTTCTGCCTAGCTGAACAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | TGGCCTGTTACCTTGCAATGCTCCTTGTGTATCTCCTACCCACGCTaGCTTCCACAGGCAACTACCCCCGACCCCAGCGTGTGCTCCAGC | + |
Preference number: 1 (lower is better) Translates to: WPVTLQCSLCISYPR*LPQATTPDPSVCSS Trigger: GCTGGAGCACACGCTGGGGTCGGGGGTAGTTGCCTGTGGAAGCCAGCGTGGGTAGGAGATACACAAGGAGCATTGCAAGGTAACAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR TCA 90 bp | AACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGTCCCTaGATGTCTTTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCT | + |
Preference number: 1 (lower is better) Translates to: NSSPGPKISGSGQSP*MSLCPLALPSGATS Trigger: AGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACATTCAGGGACTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR TCA 90 bp | GGCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTaGCAGGTTCAATGCCCATACACAGGTCAGGTCAGTTTCCCCTTG | + |
Preference number: 1 (lower is better) Translates to: GSTRAVGAFFAVFHT*QVQCPYTGQVSFPL Trigger: CAAGGGGAAACTGACCTGACCTGTGTATGGGCATTGAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | GGAAAGCAGCCTCTCTCATCTGCAGCCCAGCCTGTCTTTGGAACTTaGTGGGGCCCTCAGGACACCACAGGCATTTATTTCCCCACCAAG | + |
Preference number: 1 (lower is better) Translates to: GKQPLSSAAQPVFGT*WGPQDTTGIYFPTK Trigger: CTTGGTGGGGAAATAAATGCCTGTGGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGGCTGCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | CCCTGCCGGTTGAATGTCAGCACTGTCACCCACAGCCTTCAGGTTTaGAAACTTAGGCAGATTGCCACAACTCTGGAGTGCAGCCCCGAG | + |
Preference number: 1 (lower is better) Translates to: PCRLNVSTVTHSLQV*KLRQIATTLECSPE Trigger: CTCGGGGCTGCACTCCAGAGTTGTGGCAATCTGCCTAAGTTTCCAAACCTGAAGGCTGTGGGTGACAGTGCTGACATTCAACCGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | AAGCAGCCTCTCTCATCTGCAGCCCAGCCTGTCTTTGGAACTTGGTaGGGCCCTCAGGACACCACAGGCATTTATTTCCCCACCAAGGTT | + |
Preference number: 1 (lower is better) Translates to: KQPLSSAAQPVFGTW*GPQDTTGIYFPTKV Trigger: AACCTTGGTGGGGAAATAAATGCCTGTGGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | ACACACAGGAAAGCAGCCTCTCTCATCTGCAGCCCAGCCTGTCTTTaGAACTTGGTGGGGCCCTCAGGACACCACAGGCATTTATTTCCC | + |
Preference number: 1 (lower is better) Translates to: THRKAASLICSPACL*NLVGPSGHHRHLFP Trigger: GGGAAATAAATGCCTGTGGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGGCTGCTTTCCTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | CCCACAGCCTTCAGGTTTGGAAACTTAGGCAGATTGCCACAACTCTaGAGTGCAGCCCCGAGGCCCACTCTAAGGGAAAAGTCCTTTCCC | + |
Preference number: 1 (lower is better) Translates to: PTAFRFGNLGRLPQL*SAAPRPTLREKSFP Trigger: GGGAAAGGACTTTTCCCTTAGAGTGGGCCTCGGGGCTGCACTCCAGAGTTGTGGCAATCTGCCTAAGTTTCCAAACCTGAAGGCTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | CGGGAGAAAGAGCTCTTCTGGGTTGTGTGGGTCAGGGTCTTGAACTaGGGAAGAGGAATAGGAATGTGGAGAGACCCTGACCTCAAGGCC | + |
Preference number: 1 (lower is better) Translates to: REKELFWVVWVRVLN*GRGIGMWRDPDLKA Trigger: GGCCTTGAGGTCAGGGTCTCTCCACATTCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 90 bp | CCAGCTCCAGGCTGCTGGCTTCCTGAAGGACTACAGACCTATTCCTaGCATCTGTCTACTCTAACGGACACACAGACAGAGGGGAAGAGA | + |
Preference number: 1 (lower is better) Translates to: PAPGCWLPEGLQTYS*HLSTLTDTQTEGKR Trigger: TCTCTTCCCCTCTGTCTGTGTGTCCGTTAGAGTAGACAGATGGCAGGAATAGGTCTGTAGTCCTTCAGGAAGCCAGCAGCCTGGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | AGAGGTAGAAGAGGATTGGTTCACTCGCCAGCATGGAGAGAACTGTaGGAGGTGTCTCCAGAAACTCACACGTGTACAGAGCACAGGAGC | + |
Preference number: 1 (lower is better) Translates to: RGRRGLVHSPAWREL*EVSPETHTCTEHRS Trigger: GCTCCTGTGCTCTGTACACGTGTGAGTTTCTGGAGACACCTCCCACAGTTCTCTCCATGCTGGCGAGTGAACCAATCCTCTTCTACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | GAAGGCAACTCGAATGAGAGGAGCCCATTTCCAGCTCCAGGCTGCTaGCTTCCTGAAGGACTACAGACCTATTCCTGCCATCTGTCTACT | + |
Preference number: 1 (lower is better) Translates to: EGNSNERSPFPAPGC*LPEGLQTYSCHLST Trigger: AGTAGACAGATGGCAGGAATAGGTCTGTAGTCCTTCAGGAAGCCAGCAGCCTGGAGCTGGAAATGGGCTCCTCTCATTCGAGTTGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR TCA 90 bp | GAGGGCTGGTTTTCTGCCTCAGCAACATGTCAGCTAGAGCTAGGGTaGTGGAGCATGAGACCCCTCACTACCTTGGTCATCATCAGATTC | + |
Preference number: 1 (lower is better) Translates to: EGWFSASATCQLELG*WSMRPLTTLVIIRF Trigger: GAATCTGATGATGACCAAGGTAGTGAGGGGTCTCATGCTCCATCACCCTAGCTCTAGCTGACATGTTGCTGAGGCAGAAAACCAGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 90 bp | CACCACAGGCATTTATTTCCCCACCAAGGTTATGTGCCTTTTAGCTaGCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGC | + |
Preference number: 1 (lower is better) Translates to: HHRHLFPHQGYVPFS*HLPSTPGIHQFWQC Trigger: GCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTGGTGGGGAAATAAATGCCTGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CCA 90 bp | CCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTaGCAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTC | + |
Preference number: 1 (lower is better) Translates to: PFSCHLPSTPGIHQF*QCCDSDWLCFQGHF Trigger: GAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR GCA 90 bp | GGCATTTATTTCCCCACCAAGGTTATGTGCCTTTTAGCTGCCATCTaGCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACA | + |
Preference number: 1 (lower is better) Translates to: GIYFPTKVMCLLAAI*QAHLGSTSSGNAVT Trigger: TGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTGGTGGGGAAATAAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR GCA 90 bp | CTCAAGGCCCGGAAGCATCTGCGGGTGGAGACAAAGTTGCCTTCCTaGCTGTTTATAGTTATCTGCAACATGGGGATTAGTTTCGGCTTG | + |
Preference number: 1 (lower is better) Translates to: LKARKHLRVETKLPS*LFIVICNMGISFGL Trigger: CAAGCCGAAACTAATCCCCATGTTGCAGATAACTATAAACAGGCAGGAAGGCAACTTTGTCTCCACCCGCAGATGCTTCCGGGCCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 90 bp | GAGGGTACTAAAGGATTCTTGGCACCCTTGGCCCTAGTCTGGGGGTaGATGTGTATACACCACACACTGGAACATACACAAAACACACAG | + |
Preference number: 1 (lower is better) Translates to: EGTKGFLAPLALVWG*MCIHHTLEHTQNTQ Trigger: CTGTGTGTTTTGTGTATGTTCCAGTGTGTGGTGTATACACATGCACCCCCAGACTAGGGCCAAGGGTGCCAAGAATCCTTTAGTACCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | GTTCTAAGAGTGAGTTCCCTGGATTGCAGCAATATCAGACATCAATaGGGGCAAGGCACAAAGCCTCGTGCTACTAACTCTAGGACTGGC | + |
Preference number: 1 (lower is better) Translates to: VLRVSSLDCSNIRHQ*GQGTKPRATNSRTG Trigger: GCCAGTCCTAGAGTTAGTAGCACGAGGCTTTGTGCCTTGCCCCCATTGATGTCTGATATTGCTGCAATCCAGGGAACTCACTCTTAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR TCA 90 bp | TTGAAGACACAGACGTCAACGGCCATGAGCTTAACAGCAAGGTTGTaGCAGGAACTACAGTGGAAGGGACATCACCATGTCCTTTGGCAT | + |
Preference number: 1 (lower is better) Translates to: LKTQTSTAMSLTARL*QELQWKGHHHVLWH Trigger: ATGCCAAAGGACATGGTGATGTCCCTTCCACTGTAGTTCCTGTCACAACCTTGCTGTTAAGCTCATGGCCGTTGACGTCTGTGTCTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | GGAATGGGATTTATAACACGGGAGAAAGAGCTCTTCTGGGTTGTGTaGGTCAGGGTCTTGAACTGGGGAAGAGGAATAGGAATGTGGAGA | + |
Preference number: 1 (lower is better) Translates to: GMGFITREKELFWVV*VRVLNWGRGIGMWR Trigger: TCTCCACATTCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCGTGTTATAAATCCCATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | GTCTTGTGTGCCTGCATACACTGGGACATGTGTGTGCACACACTGTaGACAAATGTAGTTATTCAAGGCTGGAACAATCTGCTATCAGCC | + |
Preference number: 1 (lower is better) Translates to: VLCACIHWDMCVHTL*TNVVIQGWNNLLSA Trigger: GGCTGATAGCAGATTGTTCCAGCCTTGAATAACTACATTTGTCCACAGTGTGTGCACACACATGTCCCAGTGTATGCAGGCACACAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 90 bp | GACATGTGTGTGCACACACTGTGGACAAATGTAGTTATTCAAGGCTaGAACAATCTGCTATCAGCCTTCGACAGCACCCAGCCTTCAAAA | + |
Preference number: 1 (lower is better) Translates to: DMCVHTLWTNVVIQG*NNLLSAFDSTQPSK Trigger: TTTTGAAGGCTGGGTGCTGTCGAAGGCTGATAGCAGATTGTTCCAGCCTTGAATAACTACATTTGTCCACAGTGTGTGCACACACATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 90 bp | CTATTCTCTTTAATACATGGGCTAAGCTCTAAGCAAAAACAAATCTaGTTCCCATATCTGCTACATTCCGGCTTCTGTGGGAGCTGTAGA | + |
Preference number: 1 (lower is better) Translates to: LFSLIHGLSSKQKQI*FPYLLHSGFCGSCR Trigger: TCTACAGCTCCCACAGAAGCCGGAATGTAGCAGATATGGGAAGCAGATTTGTTTTTGCTTAGAGCTTAGCCCATGTATTAAAGAGAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR TCA 90 bp | ACACAGAAATGCACAAGGCATGGTCCCTCTCAGGAGTTCTTACTCTaGAAAAGCTTTCACCTTCTGAAGCAACTTACTCTCTCTTTTAAT | + |
Preference number: 1 (lower is better) Translates to: TQKCTRHGPSQEFLL*KSFHLLKQLTLSFN Trigger: ATTAAAAGAGAGAGTAAGTTGCTTCAGAAGGTGAAAGCTTTTTCAGAGTAAGAACTCCTGAGAGGGACCATGCCTTGTGCATTTCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 90 bp | CCTTCCTGGCAGCTGAACCTGGGCAGAGGTGATTCCAGGCAGGCCTaGAGGGACCCCTGTCAGTGCTTAGGGCCAGTACCCGCCCTGACA | + |
Preference number: 2 (lower is better) Translates to: PSWQLNLGRGDSRQA*RDPCQCLGPVPALT Trigger: TGTCAGGGCGGGTACTGGCCCTAAGCACTGACAGGGGTCCCTCAAGGCCTGCCTGGAATCACCTCTGCCCAGGTTCAGCTGCCAGGAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 90 bp | CCCACAGTGGCCCCTCAAGCAAGCCACAGCCCCTCTGCACCCTGCTaGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGAATTAACA | + |
Preference number: 2 (lower is better) Translates to: PTVAPQASHSPSAPC*ALQNKKGPKVGELT Trigger: TGTTAATTCGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGGCTGTGGCTTGCTTGAGGGGCCACTGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR TCA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGCTCTGCTGCCACCTGTaGCCAGGAGTGAAGCCCCAC | + |
Preference number: 2 (lower is better) Translates to: AICQAHLGSTSSGNAVTVLCCHL*PGVKPH Trigger: GTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAG...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR GCA 90 bp | GCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTGACAGGTTCCACCCTGCTTGGCGCTaGAGAACAAGAAGGGCCCGA | + |
Preference number: 2 (lower is better) Translates to: APPGLWVPSLLSSTPDRFHPAWR*RTRRAR Trigger: TCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTG...GAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CCA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACCTTGGCCCTGCCCAGTaGAGCCACGTCTTTCCCGTC | + |
Preference number: 2 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDLGPAQ*SHVFPV Trigger: GACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAG...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | CATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCCCCCTCTGCACCCTGCTTaGCGCTGCAGAACAAGAAGG | + |
Preference number: 2 (lower is better) Translates to: HLFSLLPPVTRSEAPQWPPLHPA*RCRTRR Trigger: CCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGG...GGGCCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | AGACATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGTGTCTTTGTGCCCCTTaGCCCTGCCCAGTGGAGCCA | + |
Preference number: 2 (lower is better) Translates to: RHLFSLLPPVTRSEAPQWCLCAP*PCPVEP Trigger: TGGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACA...CCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | GCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTGACAGGTTCGTCTACTCTACCAGCTaGGGCTGGGTGGACAATGCT | + |
Preference number: 2 (lower is better) Translates to: APPGLWVPSLLSSTPDRFVYSTS*GWVDNA Trigger: AGCATTGTCCACCCAGCCCCAGCTGGTAGAGTAGAC...GAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CCA 90 bp | GGAATGGGATTTATAACACGGGAGAAAGAGCTCTTCTGGGTTGTGTGGGTCAGGGGCAGAAGCTCCTCCTaGCCACAGGGAGGCGCTGGG | + |
Preference number: 2 (lower is better) Translates to: GMGFITREKELFWVVWVRGRSSS*PQGGAG Trigger: CCCAGCGCCTCCCTGTGGCCAGGAGGAGCTTCTGCC...CCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCGTGTTATAAATCCCATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR TCA 90 bp | CATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCCCTCTGGTCAGAGTCCCTaGATGTCTTTGTGCCCCTTG | + |
Preference number: 2 (lower is better) Translates to: HLFSLLPPVTRSEAPQWPSGQSP*MSLCPL Trigger: CAAGGGGCACAAAGACATTCAGGGACTCTGACCAGA...GGGCCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | AACCTGTTCCCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGACTTGGCCCTGCCCAGTaGAGCCACGTCTTTCCCGTC | + |
Preference number: 2 (lower is better) Translates to: NLFPCGFGVNWDALAVAGLGPAQ*SHVFPV Trigger: GACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAG...TCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGGAACAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | CCAGAAATTAGGACCAAGCTATGTAGGGGGAGGGGGAGGAAGGGACACACACACCCTGTCTTTGGAACTTaGTGGGGCCCTCAGGACACC | + |
Preference number: 2 (lower is better) Translates to: PEIRTKLCRGRGRKGHTHPVFGT*WGPQDT Trigger: GGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGG...GTGTGTGTGTCCCTTCCTCCCCCTCCCCCTACATAGCTTGGTCCTAATTTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 90 bp | AGGAAAGCAGCCTCTCTCATCTGCAGCCCAGCCTGTCTTTGGAACTaGGTGGGGCCCTCAGGACACCACAGGCATTTATTTCCCCACCAA | + |
Preference number: 2 (lower is better) Translates to: RKAASLICSPACLWN*VGPSGHHRHLFPHQ Trigger: TTGGTGGGGAAATAAATGCCTGTGGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGGCTGCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 90 bp | CACACACAGGAAAGCAGCCTCTCTCATCTGCAGCCCAGCCTGTCTTaGGAACTTGGTGGGGCCCTCAGGACACCACAGGCATTTATTTCC | + |
Preference number: 2 (lower is better) Translates to: HTQESSLSHLQPSLS*ELGGALRTPQAFIS Trigger: GGAAATAAATGCCTGTGGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGGCTGCTTTCCTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CCA 90 bp | TGGCAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTCCTCTGCACCCTGCTTaGCGCTGCAGAACAAGAAGG | + |
Preference number: 2 (lower is better) Translates to: WQCCDSDWLCFQGHFPPPPLHPA*RCRTRR Trigger: CCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGG...AGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | GGGGAGGGGGAGGAAGGGACACACACACACAGGAAAGCAGCCTCTCTCATCTGCTGCTGTGACAGTGACTaGCTGTGTTTTCAAGGCCAT | + |
Preference number: 2 (lower is better) Translates to: GEGEEGTHTHRKAASLICCCDSD*LCFQGH Trigger: ATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCA...GCAGATGAGAGAGGCTGCTTTCCTGTGTGTGTGTGTCCCTTCCTCCCCCTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CCA 90 bp | CATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCCCAAAGATCTCAGGCTCTaGTCAGAGTCCCTGAATGTC | + |
Preference number: 2 (lower is better) Translates to: HLFSLLPPVTRSEAPQWPKDLRL*SESLNV Trigger: GACATTCAGGGACTCTGACCAGAGCCTGAGATCTTT...GGGCCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACGCATTTATGTGGTGCTaGGGATGGAACCCAGGACTT | + |
Preference number: 2 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDAFMWC*GWNPGL Trigger: AAGTCCTGGGTTCCATCCCCAGCACCACATAAATGC...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | GCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTGACAGGTTCCTTGTAGCCAAGACATaGGGACAAAGGCCTTGCTTT | + |
Preference number: 2 (lower is better) Translates to: APPGLWVPSLLSSTPDRFLVAKT*GQRPCF Trigger: AAAGCAAGGCCTTTGTCCCCATGTCTTGGCTACAAG...GAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR TCA 90 bp | GCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTGACAGGTTCAAGCATTCTACAAACTaGGCTACATCCCCCTGCTTA | + |
Preference number: 2 (lower is better) Translates to: APPGLWVPSLLSSTPDRFKHSTN*ATSPCL Trigger: TAAGCAGGGGGATGTAGCTCAGTTTGTAGAATGCTT...GAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CCA 90 bp | CATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCCCAAAGTCCTTCCCAATTaGCTCAATTCCCTCTTCCTG | + |
Preference number: 2 (lower is better) Translates to: HLFSLLPPVTRSEAPQWPKVLPN*LNSLFL Trigger: CAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTT...GGGCCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR CAA 90 bp | ATAACACGGGAGAAAGAGCTCTTCTGGGTTGTGTGGGTCAGGGTCTaGAACTGGGGAAGAGGAATAGGAATGTGGAGAGACCCTGACCTC | + |
Preference number: 2 (lower is better) Translates to: ITREKELFWVVWVRV*NWGRGIGMWRDPDL Trigger: GAGGTCAGGGTCTCTCCACATTCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCGTGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR CAA 90 bp | TCAGATTCAGAGATAGGGTCTGGTCCTGAGGGTACTAAAGGATTCTaGGCACCCTTGGCCCTAGTCTGGGGGTGCATGTGTATACACCAC | + |
Preference number: 2 (lower is better) Translates to: SDSEIGSGPEGTKGF*APLALVWGCMCIHH Trigger: GTGGTGTATACACATGCACCCCCAGACTAGGGCCAAGGGTGCCAAGAATCCTTTAGTACCCTCAGGACCAGACCCTATCTCTGAATCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR-3UTR TCA 90 bp | GGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCGGACATTCCTTACATTaGGGAGAACCCAGGTTCCTG | + |
Preference number: 2 (lower is better) Translates to: GYVPFSCHLPSTPGIHQFGHSLH*GEPRFL Trigger: CAGGAACCTGGGTTCTCCTCAATGTAAGGAATGTCC...GAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR-3UTR GCA 90 bp | TTATGTAGCCAAGGAGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTGTGCCCCTTGGCCCTaGCCAGTGGAGCCACGTCTT | + |
Preference number: 2 (lower is better) Translates to: LCSQGECLVLLTLFLTCICAPWP*PVEPRL Trigger: AAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACA...AATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCTCCTTGGCTACATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR-3UTR GCA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACACTCTGTTTCTTACCTaGATTTATGTGGTGCTGGGG | + |
Preference number: 2 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDTLFLT*IYVVLG Trigger: CCCCAGCACCACATAAATGCAGGTAAGAAACAGAGT...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR-3UTR CCA 90 bp | ATTCCTTACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTGTCTTTGTGCCCCTTaGCCCTGCCCAGTGGAGCCA | + |
Preference number: 2 (lower is better) Translates to: IPYIEENPGSCSNLFPCGCLCAP*PCPVEP Trigger: TGGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACA...ACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTAAGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR-3UTR CCA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACGTTCCCTTGTGGTTTTaGTGTAAACTGGGATGCACT | + |
Preference number: 2 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDVPLWF*CKLGCT Trigger: AGTGCATCCCAGTTTACACCAAAACCACAAGGGAAC...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR-3UTR TCA 90 bp | CAAGGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGAATGCTTGGTCCTCCTaGCTCTGTTTCTTACCTGCA | + |
Preference number: 2 (lower is better) Translates to: QGYVPFSCHLPSTPGIHQNAWSS*LCFLPA Trigger: TGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATT...CTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR GCA 90 bp | CTATTCTCTTTAATACATGGGCTAAGCTCTAAGCAAAAACAAATCTGCTTCCCACCCGACCCCAGCGTGTaGTCCAGCTGTGGCGGGTGG | + |
Preference number: 2 (lower is better) Translates to: LFSLIHGLSSKQKQICFPPDPSV*SSCGGW Trigger: CCACCCGCCACAGCTGGAGCACACGCTGGGGTCGGG...TGGGAAGCAGATTTGTTTTTGCTTAGAGCTTAGCCCATGTATTAAAGAGAATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR TCA 90 bp | AGGATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTGGACATTCCTTACATTaGGGAGAACCCAGGTTCCTG | + |
Preference number: 2 (lower is better) Translates to: RIGPKVLPNWLNSLFLFCGHSLH*GEPRFL Trigger: CAGGAACCTGGGTTCTCCTCAATGTAAGGAATGTCC...ACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR TCA 90 bp | TCCCAGCCAAAGAACAGACAGCTATTTCCAAACACTCACCTAAAACAAACGATTACCTGTGACCAGGAGTaGAGCCCCACAGTGGCCCCT | + |
Preference number: 2 (lower is better) Translates to: SQPKNRQLFPNTHLKQTITCDQE*SPTVAP Trigger: AGGGGCCACTGTGGGGCTTCACTCCTGGTCACAGGT...AATCGTTTGTTTTAGGTGAGTGTTTGGAAATAGCTGTCTGTTCTTTGGCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR-3UTR GCA 90 bp | ATTCCTTACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTGGTGTAAACTGGGATaGACTGGCTGTGGCTGGAGC | + |
Preference number: 2 (lower is better) Translates to: IPYIEENPGSCSNLFPCGWCKLG*TGCGWS Trigger: GCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCA...ACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTAAGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | CAAGGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGAAAGTCCTTCCCAATTaGCTCAATTCCCTCTTCCTG | + |
Preference number: 2 (lower is better) Translates to: QGYVPFSCHLPSTPGIHQKVLPN*LNSLFL Trigger: CAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTT...CTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR TCA 90 bp | TCAAAAGGTCCCTCAAAGAAACCCCTGGAATGTTCCAGAACATATTGGTGGTTCTCTGGTCAGAGTCCCTaGATGTCTTTGTGCCCCTTG | + |
Preference number: 2 (lower is better) Translates to: SKGPSKKPLECSRTYWWFSGQSP*MSLCPL Trigger: CAAGGGGCACAAAGACATTCAGGGACTCTGACCAGA...GAACCACCAATATGTTCTGGAACATTCCAGGGGTTTCTTTGAGGGACCTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CCA 90 bp | AGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGACTAAACTCAAGCCCTaGACCAAAGATCTCAGGCTC | + |
Preference number: 2 (lower is better) Translates to: RMLGPPDSVSYLHLCGAGTKLKP*TKDLRL Trigger: GAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGT...CCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 90 bp | TTAACCCTAGAAGTGACAGTAGAAAACAAGCGAACCAGGATCCATTaGAAGACACAGACGTCAACGGCCATGAGCTTAACAGCAAGGTTG | + |
Preference number: 2 (lower is better) Translates to: LTLEVTVENKRTRIH*KTQTSTAMSLTARL Trigger: CAACCTTGCTGTTAAGCTCATGGCCGTTGACGTCTGTGTCTTCAAATGGATCCTGGTTCGCTTGTTTTCTACTGTCACTTCTAGGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CCA 90 bp | TGTTTCTTACCTGCATTTATGTGGTGCTGGGGATGGAACCCAGGACTTCATTTAACTAAACTCAAGCCCTaGACCAAAGATCTCAGGCTC | + |
Preference number: 2 (lower is better) Translates to: CFLPAFMWCWGWNPGLHLTKLKP*TKDLRL Trigger: GAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGT...TAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CCA 90 bp | TCCCAGCCAAAGAACAGACAGCTATTTCCAAACACTCACCTAAAACAAACGATTGCATTTATGTGGTGCTaGGGATGGAACCCAGGACTT | + |
Preference number: 2 (lower is better) Translates to: SQPKNRQLFPNTHLKQTIAFMWC*GWNPGL Trigger: AAGTCCTGGGTTCCATCCCCAGCACCACATAAATGC...AATCGTTTGTTTTAGGTGAGTGTTTGGAAATAGCTGTCTGTTCTTTGGCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR GCA 90 bp | CTATTCTCTTTAATACATGGGCTAAGCTCTAAGCAAAAACAAATCTGCTTCCCAGAACACACACAGAAATaGACAAGGCATGGTCCCTCT | + |
Preference number: 2 (lower is better) Translates to: LFSLIHGLSSKQKQICFPEHTQK*TRHGPS Trigger: AGAGGGACCATGCCTTGTGCATTTCTGTGTGTGTTC...TGGGAAGCAGATTTGTTTTTGCTTAGAGCTTAGCCCATGTATTAAAGAGAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 90 bp | CTCAAAAGGTCCCTCAAAGAAACCCCTGGAATGTTCCAGAACATATaGGTGGTTCAATTTCAGGTAATAAATTCAGCCTTGTTTCACAGA | + |
Preference number: 2 (lower is better) Translates to: LKRSLKETPGMFQNI*VVQFQVINSALFHR Trigger: TCTGTGAAACAAGGCTGAATTTATTACCTGAAATTGAACCACCAATATGTTCTGGAACATTCCAGGGGTTTCTTTGAGGGACCTTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 90 bp | AAGGGATTTCCTGGGGGCTGTAGATTCAGTTGCTCCCTCTTTCCGTaGAACAAATTGAAAATTCTATTATTGCATTATAGCGGAGTAAAA | + |
Preference number: 2 (lower is better) Translates to: KGFPGGCRFSCSLFP*NKLKILLLHYSGVK Trigger: TTTTACTCCGCTATAATGCAATAATAGAATTTTCAATTTGTTCAACGGAAAGAGGGAGCAACTGAATCTACAGCCCCCAGGAAATCCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CAA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGATGTCTTTGTGCCCCTaGGCCCTGCCCAGTGGAGCC | + |
Preference number: 3 (lower is better) Translates to: AICQAHLGSTSSGNAVTVMSLCP*ALPSGA Trigger: GGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACAT...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR GCA 72 bp | GGGACACACACACACAGGAAAGCAGCCTCTCTCATCTaGAGCCCAGCCTGTCTTTGGAACTTGGTGGGGCCC | + |
Preference number: 3 (lower is better) Translates to: GTHTHRKAASLI*SPACLWNLVGP Trigger: GGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGGCTGCTTTCCTGTGTGTGTGTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 72 bp | AAAGGTGGGGATTCCGGCATACTGCCTAGGCCAACCTaGTGTCAGGCCCTCACAGGGGCTGCTCAAACTCCA | + |
Preference number: 3 (lower is better) Translates to: KGGDSGILPRPT*CQALTGAAQTP Trigger: TGGAGTTTGAGCAGCCCCTGTGAGGGCCTGACAGCAGGTTGGCCTAGGCAGTATGCCGGAATCCCCACCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | ACCTTGCAATGCTCCTTGTGTATCTCCTACCCACGCTaGCTTCCACAGGCAACTACCCCCGACCCCAGCGTG | + |
Preference number: 3 (lower is better) Translates to: TLQCSLCISYPR*LPQATTPDPSV Trigger: CACGCTGGGGTCGGGGGTAGTTGCCTGTGGAAGCCAGCGTGGGTAGGAGATACACAAGGAGCATTGCAAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CAA 90 bp | CAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTCCCCCCTCTGCACCCTGCTaGGCGCTGCAGAACAAGAAG | + |
Preference number: 3 (lower is better) Translates to: QCCDSDWLCFQGHFPPPPPSAPC*ALQNKK Trigger: CTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGG...GGGAGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR TCA 72 bp | GAACTGGGGAAGAGGAATAGGAATGTGGAGAGACCCTaGCCTCAAGGCCCGGAAGCATCTGCGGGTGGAGAC | + |
Preference number: 3 (lower is better) Translates to: ELGKRNRNVERP*PQGPEASAGGD Trigger: GTCTCCACCCGCAGATGCTTCCGGGCCTTGAGGTCAGGGTCTCTCCACATTCCTATTCCTCTTCCCCAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | ACACACAGCCCTCGGTCGCCAATGCTTTGTAAGTGCTaGCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGT | + |
Preference number: 3 (lower is better) Translates to: THSPRSPMLCKC*LHQGCGCLLCC Trigger: ACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGCCAGCACTTACAAAGCATTGGCGACCGAGGGCTGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR TCA 72 bp | ATGGGGATTAGTTTCGGCTTGGCGCCCCCTGCCGGTTaGATGTCAGCACTGTCACCCACAGCCTTCAGGTTT | + |
Preference number: 3 (lower is better) Translates to: MGISFGLAPPAG*MSALSPTAFRF Trigger: AAACCTGAAGGCTGTGGGTGACAGTGCTGACATTCAACCGGCAGGGGGCGCCAAGCCGAAACTAATCCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 72 bp | TGTGGAGAGACCCTGACCTCAAGGCCCGGAAGCATCTaGGGGTGGAGACAAAGTTGCCTTCCTGCCTGTTTA | + |
Preference number: 3 (lower is better) Translates to: CGETLTSRPGSI*GWRQSCLPACL Trigger: TAAACAGGCAGGAAGGCAACTTTGTCTCCACCCGCAGATGCTTCCGGGCCTTGAGGTCAGGGTCTCTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 72 bp | ATTACACACAGCCCTCGGTCGCCAATGCTTTGTAAGTaGTGGCTCCACCAGGGCTGTGGGTGCCTTCTTTGC | + |
Preference number: 3 (lower is better) Translates to: ITHSPRSPMLCK*WLHQGCGCLLC Trigger: GCAAAGAAGGCACCCACAGCCCTGGTGGAGCCAGCACTTACAAAGCATTGGCGACCGAGGGCTGTGTGTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | ACTGGCTGTGGCTGGAGCGGTACTAAACTCAAGCCCTaGACCAAAGATCTCAGGCTCTGGTCAGAGTCCCTG | + |
Preference number: 3 (lower is better) Translates to: TGCGWSGTKLKP*TKDLRLWSESL Trigger: CAGGGACTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCAGCCACAGCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CCA 72 bp | GGGATCCACCAGTTCTGGCAATGCTGTGACAGTGACTaGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTCCC | + |
Preference number: 3 (lower is better) Translates to: GIHQFWQCCDSD*LCFQGHFPPPP Trigger: GGGAGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCAGAACTGGTGGATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR GCA 72 bp | AAGTGCTGGCTCCACCAGGGCTGTGGGTGCCTTCTTTaGTGTCTTCCACACCTGACAGGTTCAATGCCCATA | + |
Preference number: 3 (lower is better) Translates to: KCWLHQGCGCLL*CLPHLTGSMPI Trigger: TATGGGCATTGAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGCCAGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 72 bp | TGGAAGGTTCAATTACACACAGCCCTCGGTCGCCAATaGTTTGTAAGTGCTGGCTCCACCAGGGCTGTGGGT | + |
Preference number: 3 (lower is better) Translates to: WKVQLHTALGRQ*FVSAGSTRAVG Trigger: ACCCACAGCCCTGGTGGAGCCAGCACTTACAAAGCATTGGCGACCGAGGGCTGTGTGTAATTGAACCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | CCTCTCTCATCTGCAGCCCAGCCTGTCTTTGGAACTTaGTGGGGCCCTCAGGACACCACAGGCATTTATTTC | + |
Preference number: 3 (lower is better) Translates to: PLSSAAQPVFGT*WGPQDTTGIYF Trigger: GAAATAAATGCCTGTGGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | CCGGCCAGGAAGTCTACTCTACCAGCTGGGGCTGGGTaGACAATGCTAACAGCAAGAGGTAGAAGAGGATTG | + |
Preference number: 3 (lower is better) Translates to: PARKSTLPAGAG*TMLTARGRRGL Trigger: CAATCCTCTTCTACCTCTTGCTGTTAGCATTGTCCACCCAGCCCCAGCTGGTAGAGTAGACTTCCTGGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CAA 90 bp | CCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGATGTTTTGTTTTCAGTTaGAATGAGTCTCCGGACTTT | + |
Preference number: 3 (lower is better) Translates to: PLCTLLGAAEQEGPEGGRCFVFS*NESPDF Trigger: AAAGTCCGGAGACTCATTCAAACTGAAAACAAAACA...TCGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CAA 90 bp | GGAATGGGATTTATAACACGGGAGAAAGAGCTCTTCTGGGTTGTGTGGGTCAGGCCCTCTGCACCCTGCTaGGCGCTGCAGAACAAGAAG | + |
Preference number: 3 (lower is better) Translates to: GMGFITREKELFWVVWVRPSAPC*ALQNKK Trigger: CTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGG...CCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCGTGTTATAAATCCCATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR-3UTR CAA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGAGCCAAGGAGAATGCTaGGTCCTCCTGACTCTGTTT | + |
Preference number: 3 (lower is better) Translates to: AICQAHLGSTSSGNAVTVSQGEC*VLLTLF Trigger: AAACAGAGTCAGGAGGACCAAGCATTCTCCTTGGCT...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR GCA 72 bp | CTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATaGTGTGACAGTGACTGGCTGTGTTTTCAAGGCCAT | + |
Preference number: 3 (lower is better) Translates to: LPSTPGIHQFWQ*CDSDWLCFQGH Trigger: ATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR GCA 72 bp | AACTCGAATGAGAGGAGCCCATTTCCAGCTCCAGGCTaGTGGCTTCCTGAAGGACTACAGACCTATTCCTGC | + |
Preference number: 3 (lower is better) Translates to: NSNERSPFPAPG*WLPEGLQTYSC Trigger: GCAGGAATAGGTCTGTAGTCCTTCAGGAAGCCAGCAGCCTGGAGCTGGAAATGGGCTCCTCTCATTCGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | CCACTCACAGGATTAATCTTGGGTAGGATGGGAATGTaGCAGAGGTGTAACCAGCCTGCTGGGAGCCATCCT | + |
Preference number: 3 (lower is better) Translates to: PLTGLILGRMGM*QRCNQPAGSHP Trigger: AGGATGGCTCCCAGCAGGCTGGTTACACCTCTGCCACATTCCCATCCTACCCAAGATTAATCCTGTGAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR GCA 72 bp | GTTTGGAAACTTAGGCAGATTGCCACAACTCTGGAGTaGAGCCCCGAGGCCCACTCTAAGGGAAAAGTCCTT | + |
Preference number: 3 (lower is better) Translates to: VWKLRQIATTLE*SPEAHSKGKVL Trigger: AAGGACTTTTCCCTTAGAGTGGGCCTCGGGGCTGCACTCCAGAGTTGTGGCAATCTGCCTAAGTTTCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | AGAGGATTGGTTCACTCGCCAGCATGGAGAGAACTGTaGGAGGTGTCTCCAGAAACTCACACGTGTACAGAG | + |
Preference number: 3 (lower is better) Translates to: RGLVHSPAWREL*EVSPETHTCTE Trigger: CTCTGTACACGTGTGAGTTTCTGGAGACACCTCCCACAGTTCTCTCCATGCTGGCGAGTGAACCAATCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | TTCAGGTTTGGAAACTTAGGCAGATTGCCACAACTCTaGAGTGCAGCCCCGAGGCCCACTCTAAGGGAAAAG | + |
Preference number: 3 (lower is better) Translates to: FRFGNLGRLPQL*SAAPRPTLREK Trigger: CTTTTCCCTTAGAGTGGGCCTCGGGGCTGCACTCCAGAGTTGTGGCAATCTGCCTAAGTTTCCAAACCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR TCA 72 bp | CAGACGTCAACGGCCATGAGCTTAACAGCAAGGTTGTaGCAGGAACTACAGTGGAAGGGACATCACCATGTC | + |
Preference number: 3 (lower is better) Translates to: QTSTAMSLTARL*QELQWKGHHHV Trigger: GACATGGTGATGTCCCTTCCACTGTAGTTCCTGTCACAACCTTGCTGTTAAGCTCATGGCCGTTGACGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR GCA 72 bp | GGAGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTaGATTTATGTGGTGCTGGGGATGGAACCCAGGACT | + |
Preference number: 3 (lower is better) Translates to: GECLVLLTLFLT*IYVVLGMEPRT Trigger: AGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR GCA 72 bp | GACACCACAGGCATTTATTTCCCCACCAAGGTTATGTaGCTTTTAGCTGCCATCTGCCAAGCACACCTGGGA | + |
Preference number: 3 (lower is better) Translates to: DTTGIYFPTKVM*LLAAICQAHLG Trigger: TCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTGGTGGGGAAATAAATGCCTGTGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR CCA 72 bp | TGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTaGAGCGGTACTAAACTCAAGCCCTGGACCAAAGAT | + |
Preference number: 3 (lower is better) Translates to: WFWCKLGCTGCG*SGTKLKPWTKD Trigger: ATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR CCA 72 bp | GAACACACGAGTCCTGACTTCAGATTCCTATCCAGGTaGAAGGTTCAATTACACACAGCCCTCGGTCGCCAA | + |
Preference number: 3 (lower is better) Translates to: EHTSPDFRFLSR*KVQLHTALGRQ Trigger: TTGGCGACCGAGGGCTGTGTGTAATTGAACCTTCCACCTGGATAGGAATCTGAAGTCAGGACTCGTGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR CCA 72 bp | GGTACTAAAGGATTCTTGGCACCCTTGGCCCTAGTCTaGGGGTGCATGTGTATACACCACACACTGGAACAT | + |
Preference number: 3 (lower is better) Translates to: GTKGFLAPLALV*GCMCIHHTLEH Trigger: ATGTTCCAGTGTGTGGTGTATACACATGCACCCCCAGACTAGGGCCAAGGGTGCCAAGAATCCTTTAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR GCA 72 bp | CATTTATTTCCCCACCAAGGTTATGTGCCTTTTAGCTaGCATCTGCCAAGCACACCTGGGATCCACCAGTTC | + |
Preference number: 3 (lower is better) Translates to: HLFPHQGYVPFS*HLPSTPGIHQF Trigger: GAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTGGTGGGGAAATAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR GCA 72 bp | GAGACAAAGTTGCCTTCCTGCCTGTTTATAGTTATCTaGAACATGGGGATTAGTTTCGGCTTGGCGCCCCCT | + |
Preference number: 3 (lower is better) Translates to: ETKLPSCLFIVI*NMGISFGLAPP Trigger: AGGGGGCGCCAAGCCGAAACTAATCCCCATGTTGCAGATAACTATAAACAGGCAGGAAGGCAACTTTGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR GCA 72 bp | AAAGGATTCTTGGCACCCTTGGCCCTAGTCTGGGGGTaGATGTGTATACACCACACACTGGAACATACACAA | + |
Preference number: 3 (lower is better) Translates to: KGFLAPLALVWG*MCIHHTLEHTQ Trigger: TTGTGTATGTTCCAGTGTGTGGTGTATACACATGCACCCCCAGACTAGGGCCAAGGGTGCCAAGAATCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | TGTTCTAACCTGTTCCCTTGTGGTTTTGGTGTAAACTaGGATGCACTGGCTGTGGCTGGAGCGGTACTAAAC | + |
Preference number: 3 (lower is better) Translates to: CSNLFPCGFGVN*DALAVAGAVLN Trigger: GTTTAGTACCGCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGGAACAGGTTAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
3UTR CCA 72 bp | GTGAGTTCCCTGGATTGCAGCAATATCAGACATCAATaGGGGCAAGGCACAAAGCCTCGTGCTACTAACTCT | + |
Preference number: 3 (lower is better) Translates to: VSSLDCSNIRHQ*GQGTKPRATNS Trigger: AGAGTTAGTAGCACGAGGCTTTGTGCCTTGCCCCCATTGATGTCTGATATTGCTGCAATCCAGGGAACTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR CCA 72 bp | GGAATGGGATTTATAACACGGGAGAAAGAGCTCTTCTaGGTTGTGTGGGTCAGGGTCTTGAACTGGGGAAGA | + |
Preference number: 3 (lower is better) Translates to: GMGFITREKELF*VVWVRVLNWGR Trigger: TCTTCCCCAGTTCAAGACCCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCGTGTTATAAATCCCATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR GCA 72 bp | CGGAAGCATCTGCGGGTGGAGACAAAGTTGCCTTCCTaGCTGTTTATAGTTATCTGCAACATGGGGATTAGT | + |
Preference number: 3 (lower is better) Translates to: RKHLRVETKLPS*LFIVICNMGIS Trigger: ACTAATCCCCATGTTGCAGATAACTATAAACAGGCAGGAAGGCAACTTTGTCTCCACCCGCAGATGCTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CCA 72 bp | TTTATAACACGGGAGAAAGAGCTCTTCTGGGTTGTGTaGGTCAGGGTCTTGAACTGGGGAAGAGGAATAGGA | + |
Preference number: 3 (lower is better) Translates to: FITREKELFWVV*VRVLNWGRGIG Trigger: TCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCGTGTTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR CCA 72 bp | GTGCACACACTGTGGACAAATGTAGTTATTCAAGGCTaGAACAATCTGCTATCAGCCTTCGACAGCACCCAG | + |
Preference number: 3 (lower is better) Translates to: VHTLWTNVVIQG*NNLLSAFDSTQ Trigger: CTGGGTGCTGTCGAAGGCTGATAGCAGATTGTTCCAGCCTTGAATAACTACATTTGTCCACAGTGTGTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR TCA 72 bp | TGTATGCACCCAGGTAGAGATCAAGAGAAGAACAGATaGTTTCCCAGACCAAAAAGTTCCATGCGCCATCTC | + |
Preference number: 3 (lower is better) Translates to: CMHPGRDQEKNR*FPRPKSSMRHL Trigger: GAGATGGCGCATGGAACTTTTTGGTCTGGGAAATCATCTGTTCTTCTCTTGATCTCTACCTGGGTGCATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR TCA 72 bp | TTTTGTTATGTAGCCAAGGAGAATGCTTGGTCCTCCTaGCTCTGTTTCTTACCTGCATTTATGTGGTGCTGG | + |
Preference number: 3 (lower is better) Translates to: FCYVAKENAWSS*LCFLPAFMWCW Trigger: CCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCTCCTTGGCTACATAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CCA 72 bp | CTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGGATaGAACCCAGGACTTCATTTATGCTATGCAAGCATT | + |
Preference number: 3 (lower is better) Translates to: LCFLPAFMWCWG*NPGLHLCYASI Trigger: AATGCTTGCATAGCATAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CCA 72 bp | CAATTTTCTGAGATAGGGTCTCTTGTAGCCAAGACATaGGGACAAAGGCCTTGCTTTTGTTATGTAGCCAAG | + |
Preference number: 3 (lower is better) Translates to: QFSEIGSLVAKT*GQRPCFCYVAK Trigger: CTTGGCTACATAACAAAAGCAAGGCCTTTGTCCCCATGTCTTGGCTACAAGAGACCCTATCTCAGAAAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR-3UTR CAA 90 bp | CTATTCTCTTTAATACATGGGCTAAGCTCTAAGCAAAAACAAATCTGCTTCCCAACCTTGCAATGCTCCTaGTGTATCTCCTACCCACGC | + |
Preference number: 3 (lower is better) Translates to: LFSLIHGLSSKQKQICFPTLQCS*CISYPR Trigger: GCGTGGGTAGGAGATACACAAGGAGCATTGCAAGGT...TGGGAAGCAGATTTGTTTTTGCTTAGAGCTTAGCCCATGTATTAAAGAGAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR GCA 72 bp | TTAATACATGGGCTAAGCTCTAAGCAAAAACAAATCTaGTTCCCATATCTGCTACATTCCGGCTTCTGTGGG | + |
Preference number: 3 (lower is better) Translates to: LIHGLSSKQKQI*FPYLLHSGFCG Trigger: CCCACAGAAGCCGGAATGTAGCAGATATGGGAAGCAGATTTGTTTTTGCTTAGAGCTTAGCCCATGTATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR TCA 72 bp | AGGACAGCCTTAAGTGCCACAAAATCTGGGGAAGAGTaGAACTCTGAGAGAGGTAAATTCAATACTTTCATT | + |
Preference number: 3 (lower is better) Translates to: RTALSATKSGEE*NSERGKFNTFI Trigger: AATGAAAGTATTGAATTTACCTCTCTCAGAGTTTCACTCTTCCCCAGATTTTGTGGCACTTAAGGCTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CCA 90 bp | GCCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGCAAGCGACACCAAGCTaGGGACAGCCGTGGTGGAGT | + |
Preference number: 4 (lower is better) Translates to: APLHPAWRCRTRRARRWAQATPS*GQPWWS Trigger: ACTCCACCACGGCTGTCCCCAGCTTGGTGTCGCTTG...CGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | GCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTGACAGGTTCTCAGCCAGCTTCACCTaGAGGGCGCTGAGGGGCGGC | + |
Preference number: 4 (lower is better) Translates to: APPGLWVPSLLSSTPDRFSASFT*RALRGG Trigger: GCCGCCCCTCAGCGCCCTGCAGGTGAAGCTGGCTGA...GAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CCA 90 bp | GCCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGAGCAGGAGGTCCCCTTaGAACACACAGTGCTTGCTC | + |
Preference number: 4 (lower is better) Translates to: APLHPAWRCRTRRARRWASRRSP*NTQCLL Trigger: GAGCAAGCACTGTGTGTTCCAAGGGGACCTCCTGCT...CGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | CCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGATTGCAGAGGGCCACTTaGCCCTTGATGAAGTCCCGG | + |
Preference number: 4 (lower is better) Translates to: PLCTLLGAAEQEGPEGGRLQRAT*PLMKSR Trigger: CCGGGACTTCATCAAGGGCCAAGTGGCCCTCTGCAA...TCGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | GCCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGTGTCCTTCATCCACTTaGTTTTCCCCTCGCAGTGGG | + |
Preference number: 4 (lower is better) Translates to: APLHPAWRCRTRRARRWACPSST*FSPRSG Trigger: CCCACTGCGAGGGGAAAATCAAGTGGATGAAGGACA...CGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | GCCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGTCCCGGAGAAGAAACTaGAGGTCACGTCCACTGAGA | + |
Preference number: 4 (lower is better) Translates to: APLHPAWRCRTRRARRWASRRRN*RSRPLR Trigger: TCTCAGTGGACGTGACCTGCAGTTTCTTCTCCGGGA...CGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | CAGCTGAACCTGGGCAGAGGTGATTCCAGGCAGGCCTaGAGGGACCCCTGTCAGTGCTTAGGGCCAGTACCC | + |
Preference number: 4 (lower is better) Translates to: QLNLGRGDSRQA*RDPCQCLGPVP Trigger: GGGTACTGGCCCTAAGCACTGACAGGGGTCCCTCAAGGCCTGCCTGGAATCACCTCTGCCCAGGTTCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGGAGCTGCTCTCGGGCTaGGTCCGCTGCTGGATGGTG | + |
Preference number: 4 (lower is better) Translates to: AICQAHLGSTSSGNAVTVELLSG*VRCWMV Trigger: CACCATCCAGCAGCGGACTCAGCCCGAGAGCAGCTC...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | CCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGATGCTGGATGGTGAAGTaGAGAAGCATCATGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: PLCTLLGAAEQEGPEGGRCWMVK*RSIMPQ Trigger: CTGGGGCATGATGCTTCTGCACTTCACCATCCAGCA...TCGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | CCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGACCTTTGACTCGAGCTTaGCAATGCGCTGCAGGATGT | + |
Preference number: 4 (lower is better) Translates to: PLCTLLGAAEQEGPEGGRPLTRA*QCAAGC Trigger: ACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGG...TCGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | AGACATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGTCACCTGCAGGGCGCTaGGGGGCGGCCACATCACTT | + |
Preference number: 4 (lower is better) Translates to: RHLFSLLPPVTRSEAPQWSPAGR*GAATSL Trigger: AAGTGATGTGGCCGCCCCTCAGCGCCCTGCAGGTGA...CCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | CATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCCCAGGAAGGCTCGCAGATaGGCTGGCTCTCCTGGCACA | + |
Preference number: 4 (lower is better) Translates to: HLFSLLPPVTRSEAPQWPRKARR*AGSPGT Trigger: TGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCCT...GGGCCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | CATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCCCTCGCTGGAGTTCAGGTaGTGCTCCACCACGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: HLFSLLPPVTRSEAPQWPSLEFR*CSTTKP Trigger: GGGCTTCGTGGTGGAGCAGCACCTGAACTCCAGCGA...GGGCCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | TGGCAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTTCAGCCAGCTTCACCTaGAGGGCGCTGAGGGGCGGC | + |
Preference number: 4 (lower is better) Translates to: WQCCDSDWLCFQGHFPPPSASFT*RALRGG Trigger: GCCGCCCCTCAGCGCCCTGCAGGTGAAGCTGGCTGA...AGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | GCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTGACAGGTTCCCGTGGTGGAGTTGGTaGAGTTCGCTCCTGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: APPGLWVPSLLSSTPDRFPWWSW*SSLLCR Trigger: ACGGCACAGGAGCGAACTCCACCAACTCCACCACGG...GAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CCA 90 bp | GAATGTCTTTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGGGCGGCCACATCACTTaGCCATGGCAGAAGTCCTGT | + |
Preference number: 4 (lower is better) Translates to: ECLCAPWPCPVEPRLSRLGGHIT*PWQKSC Trigger: ACAGGACTTCTGCCATGGCCAAGTGATGTGGCCGCC...CAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | GAAAGCAGCCTCTCTCATCTGCAGCCCAGCCTGTCTTaGGAACTTGGTGGGGCCCTCAGGACACCACAGGCA | + |
Preference number: 4 (lower is better) Translates to: ESSLSHLQPSLS*ELGGALRTPQA Trigger: TGCCTGTGGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGGCTGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | TTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGAGTTAATTCCAGAGGGCCACCGCTaGATGCTGTCTCCGCAATCT | + |
Preference number: 4 (lower is better) Translates to: LCPLALPSGATSFPSELIPEGHR*MLSPQS Trigger: AGATTGCGGAGACAGCATTCAGCGGTGGCCCTCTGG...AATTAACTCAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGAGTTAATTCAGCCGTGGTGGAGTTaGTGGAGTTCGCTCCTGTGC | + |
Preference number: 4 (lower is better) Translates to: LCPLALPSGATSFPSELIQPWWS*WSSLLC Trigger: GCACAGGAGCGAACTCCACCAACTCCACCACGGCTG...AATTAACTCAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | CTGGCTGTGGCTGGAGCGGTACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCCAAGCGACACCAAGCTaGGGACAGCCGTGGTGGAGT | + |
Preference number: 4 (lower is better) Translates to: LAVAGAVLNSSPGPKISGQATPS*GQPWWS Trigger: ACTCCACCACGGCTGTCCCCAGCTTGGTGTCGCTTG...GCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCAGCCACAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGAGTTAATTGGCTCGCAGATGAGCTaGCTCTCCTGGCACACCTGT | + |
Preference number: 4 (lower is better) Translates to: LCPLALPSGATSFPSELIGSQMS*LSWHTC Trigger: ACAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCC...AATTAACTCAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | CCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGAGCGGTACTAGGGCTCCGGCACAACTaGAGAGCAGGAGGTCCCCTT | + |
Preference number: 4 (lower is better) Translates to: PCGFGVNWDALAVAGAVLGLRHN*RAGGPL Trigger: AAGGGGACCTCCTGCTCTTCAGTTGTGCCGGAGCCC...TAGTACCGCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | CAAGGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGGGGCTCCGGCACAACTaGAGAGCAGGAGGTCCCCTT | + |
Preference number: 4 (lower is better) Translates to: QGYVPFSCHLPSTPGIHQGLRHN*RAGGPL Trigger: AAGGGGACCTCCTGCTCTTCAGTTGTGCCGGAGCCC...CTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | CCAGAAATTAGGACCAAGCTATGTAGGGGGAGGGGGAGGAAGGGACACACACACGTCCACTCCATAGTCTaGGTAGCAGGGGTCCGAGCG | + |
Preference number: 4 (lower is better) Translates to: PEIRTKLCRGRGRKGHTHVHSIV*VAGVRA Trigger: CGCTCGGACCCCTGCTACGCAGACTATGGAGTGGAC...GTGTGTGTGTCCCTTCCTCCCCCTCCCCCTACATAGCTTGGTCCTAATTTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR GCA 90 bp | GCCCCTCTGCACCCTGCTTGGCGCTGCAGAACAAGAAGGGCCCGAAGGTGGGCGAGAAACTATCCACTTTaGCATACACAAGGGACTGGT | + |
Preference number: 4 (lower is better) Translates to: APLHPAWRCRTRRARRWARNYPL*HTQGTG Trigger: ACCAGTCCCTTGTGTATGGCAAAGTGGATAGTTTCT...CGCCCACCTTCGGGCCCTTCTTGTTCTGCAGCGCCAAGCAGGGTGCAGAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | CTGGCTGTGGCTGGAGCGGTACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCACCTGTTTGCAGGACTaGCCTGGCTCAGCCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: LAVAGAVLNSSPGPKISGTCLQD*PGSASF Trigger: GAAGCTGGCTGAGCCAGGGCAGTCCTGCAAACAGGT...GCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCAGCCACAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | AGACATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGGGCTCGCAGATGAGCTaGCTCTCCTGGCACACCTGT | + |
Preference number: 4 (lower is better) Translates to: RHLFSLLPPVTRSEAPQWGSQMS*LSWHTC Trigger: ACAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCC...CCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
CDS-3UTR TCA 90 bp | TTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGAGTTAATTGGTCTTGTGGCCTTTTaGCTGGGCATAGCTCGCATG | + |
Preference number: 4 (lower is better) Translates to: LCPLALPSGATSFPSELIGLVAF*LGIARM Trigger: CATGCGAGCTATGCCCAGTCAAAAGGCCACAAGACC...AATTAACTCAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | GGGGAGGGGGAGGAAGGGACACACACACACAGGAAAGCAGCCTCTCTCATCTGCTCCTTGTTGAGGTGTTaGAAGAAGGAAGGCTCGCAG | + |
Preference number: 4 (lower is better) Translates to: GEGEEGTHTHRKAASLICSLLRC*KKEGSQ Trigger: CTGCGAGCCTTCCTTCTTTCAACACCTCAACAAGGA...GCAGATGAGAGAGGCTGCTTTCCTGTGTGTGTGTGTCCCTTCCTCCCCCTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR GCA 90 bp | TGGCAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTTCGCTGGAGTTCAGGTaGTGCTCCACCACGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: WQCCDSDWLCFQGHFPPPSLEFR*CSTTKP Trigger: GGGCTTCGTGGTGGAGCAGCACCTGAACTCCAGCGA...AGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | TGGAGCGGTACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGCCTGGCACACCTGTTTaGAGGACTGCCCTGGCTCAG | + |
Preference number: 4 (lower is better) Translates to: WSGTKLKPWTKDLRLWSEPGTPV*RTALAQ Trigger: CTGAGCCAGGGCAGTCCTGCAAACAGGTGTGCCAGG...CTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TGGCAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTCAGCCGTGGTGGAGTTaGTGGAGTTCGCTCCTGTGC | + |
Preference number: 4 (lower is better) Translates to: WQCCDSDWLCFQGHFPPPQPWWS*WSSLLC Trigger: GCACAGGAGCGAACTCCACCAACTCCACCACGGCTG...AGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | CCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGAGCGGTACTAGGCCTCCAGGGGAGCTaGGCCTTCATAAGGGAATCC | + |
Preference number: 4 (lower is better) Translates to: PCGFGVNWDALAVAGAVLGLQGS*AFIRES Trigger: GGATTCCCTTATGAAGGCCCAGCTCCCCTGGAGGCC...TAGTACCGCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | GGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCGGCCTCCAGGGGAGCTaGGCCTTCATAAGGGAATCC | + |
Preference number: 4 (lower is better) Translates to: GYVPFSCHLPSTPGIHQFGLQGS*AFIRES Trigger: GGATTCCCTTATGAAGGCCCAGCTCCCCTGGAGGCC...GAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | AACCTGTTCCCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGACCGTGGTGGAGTTGGTaGAGTTCGCTCCTGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: NLFPCGFGVNWDALAVAGPWWSW*SSLLCR Trigger: ACGGCACAGGAGCGAACTCCACCAACTCCACCACGG...TCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGGAACAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGGAGATCCGGATGTCATaGCCCAGCAGGTACAGAGAT | + |
Preference number: 4 (lower is better) Translates to: AICQAHLGSTSSGNAVTVEIRMS*PSRYRD Trigger: ATCTCTGTACCTGCTGGGCCATGACATCCGGATCTC...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACTCTGTCTCCTACAGTTaGACAGCCAGACCGGTTTCC | + |
Preference number: 4 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDSVSYS*TARPVS Trigger: GGAAACCGGTCTGGCTGTCCAACTGTAGGAGACAGA...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TGGCAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTGGCGGCCACATCACTTaGCCATGGCAGAAGTCCTGT | + |
Preference number: 4 (lower is better) Translates to: WQCCDSDWLCFQGHFPPPGGHIT*PWQKSC Trigger: ACAGGACTTCTGCCATGGCCAAGTGATGTGGCCGCC...AGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | CAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTCCCCACAGTGCTTGCTCTTaGGGTAGAAGGAGGGCACCA | + |
Preference number: 4 (lower is better) Translates to: QCCDSDWLCFQGHFPPPPHSACS*GRRRAP Trigger: TGGTGCCCTCCTTCTACCCCAAGAGCAAGCACTGTG...GGGAGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | AGGATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTCGCTGGTGTGTGGGGTaGGCTCCGGCACAACTGAAG | + |
Preference number: 4 (lower is better) Translates to: RIGPKVLPNWLNSLFLFCRWCVG*APAQLK Trigger: CTTCAGTTGTGCCGGAGCCCACCCCACACACCAGCG...ACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | GCCTCTCTCATCTGCAGCCCAGCCTGTCTTTGGAACTaGGTGGGGCCCTCAGGACACCACAGGCATTTATTT | + |
Preference number: 4 (lower is better) Translates to: ASLICSPACLWN*VGPSGHHRHLF Trigger: AAATAAATGCCTGTGGTGTCCTGAGGGCCCCACCAAGTTCCAAAGACAGGCTGGGCTGCAGATGAGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 72 bp | GAGATAGGGTCTGGTCCTGAGGGTACTAAAGGATTCTaGGCACCCTTGGCCCTAGTCTGGGGGTGCATGTGT | + |
Preference number: 4 (lower is better) Translates to: EIGSGPEGTKGF*APLALVWGCMC Trigger: ACACATGCACCCCCAGACTAGGGCCAAGGGTGCCAAGAATCCTTTAGTACCCTCAGGACCAGACCCTATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | CCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGAGCGGTACTATCGCTCCTGTGCCGTTaGCCAGATTGTCCACCTTTG | + |
Preference number: 4 (lower is better) Translates to: PCGFGVNWDALAVAGAVLSLLCR*PDCPPL Trigger: CAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGA...TAGTACCGCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | GAATGTCTTTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGGTGTTGGCTTGCCAATaGAGAAGTCTGTGTTTTTGC | + |
Preference number: 4 (lower is better) Translates to: ECLCAPWPCPVEPRLSRLVLACQ*RSLCFC Trigger: GCAAAAACACAGACTTCTTCATTGGCAAGCCAACAC...CAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | ATTCCTTACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTCACCTGCAGGGCGCTaGGGGGCGGCCACATCACTT | + |
Preference number: 4 (lower is better) Translates to: IPYIEENPGSCSNLFPCGSPAGR*GAATSL Trigger: AAGTGATGTGGCCGCCCCTCAGCGCCCTGCAGGTGA...ACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTAAGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | GAATGTCTTTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGGGTCCTTTTCCTTGTTaGGGTGTTGAAAGAAGGAAG | + |
Preference number: 4 (lower is better) Translates to: ECLCAPWPCPVEPRLSRLGPFPC*GVERRK Trigger: CTTCCTTCTTTCAACACCTCAACAAGGAAAAGGACC...CAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACGTCCTTGTACAGTTCTaGGCTTTGGCAGGTCACCTT | + |
Preference number: 4 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDVLVQF*ALAGHL Trigger: AAGGTGACCTGCCAAAGCTCAGAACTGTACAAGGAC...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACGTCCCTGTTCTCCTCTaGCAGTGCCTTAATGTACCT | + |
Preference number: 4 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDVPVLL*QCLNVP Trigger: AGGTACATTAAGGCACTGGCAGAGGAGAACAGGGAC...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | ACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGTCCCTGAATGTCCACTCCATAGTCTaGGTAGCAGGGGTCCGAGCG | + |
Preference number: 4 (lower is better) Translates to: TKLKPWTKDLRLWSESLNVHSIV*VAGVRA Trigger: CGCTCGGACCCCTGCTACGCAGACTATGGAGTGGAC...ATTCAGGGACTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | GGGGAGGGGGAGGAAGGGACACACACACACAGGAAAGCAGCCTCTCTCATCTGCACAAGGGACTGGTTCTaGCTTTTGATCTCGTTGATG | + |
Preference number: 4 (lower is better) Translates to: GEGEEGTHTHRKAASLICTRDWF*LLISLM Trigger: CATCAACGAGATCAAAAGGCAGAACCAGTCCCTTGT...GCAGATGAGAGAGGCTGCTTTCCTGTGTGTGTGTGTCCCTTCCTCCCCCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR GCA 90 bp | ACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGTCCCTGAATCCTGGCACACCTGTTTaGAGGACTGCCCTGGCTCAG | + |
Preference number: 4 (lower is better) Translates to: TKLKPWTKDLRLWSESLNPGTPV*RTALAQ Trigger: CTGAGCCAGGGCAGTCCTGCAAACAGGTGTGCCAGG...ATTCAGGGACTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | ATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCTCTGTCTCCTACAGTTaGACAGCCAGACCGGTTTCC | + |
Preference number: 4 (lower is better) Translates to: MCLLAAICQAHLGSTSSGSVSYS*TARPVS Trigger: GGAAACCGGTCTGGCTGTCCAACTGTAGGAGACAGA...GCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | TCTGGTCCTGAGGGTACTAAAGGATTCTTGGCACCCTaGGCCCTAGTCTGGGGGTGCATGTGTATACACCAC | + |
Preference number: 4 (lower is better) Translates to: SGPEGTKGFLAP*ALVWGCMCIHH Trigger: GTGGTGTATACACATGCACCCCCAGACTAGGGCCAAGGGTGCCAAGAATCCTTTAGTACCCTCAGGACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | CAAGGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGCTGTCTCCGCAATCTTaGAGCCCGATTCCTTGGTCA | + |
Preference number: 4 (lower is better) Translates to: QGYVPFSCHLPSTPGIHQLSPQS*SPIPWS Trigger: TGACCAAGGAATCGGGCTTCAAGATTGCGGAGACAG...CTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | ATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCTGCTTTTGGGAGGGTTaGACTTGGGGTTCAGGAAAG | + |
Preference number: 4 (lower is better) Translates to: MCLLAAICQAHLGSTSSGCFWEG*TWGSGK Trigger: CTTTCCTGAACCCCAAGTTCAACCCTCCCAAAAGCA...GCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | ATTCTTACCCAAATCCTTCTCCAAGTTCAAGGACAGCTCCTGGAGCCTACGATGAGGAAGGCTCGCAGATaGGCTGGCTCTCCTGGCACA | + |
Preference number: 4 (lower is better) Translates to: ILTQILLQVQGQLLEPTMRKARR*AGSPGT Trigger: TGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCCT...CATCGTAGGCTCCAGGAGCTGTCCTTGAACTTGGAGAAGGATTTGGGTAAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | GCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTGACAGGTTCGGTCCTTTTCCTTGTTaGGGTGTTGAAAGAAGGAAG | + |
Preference number: 4 (lower is better) Translates to: APPGLWVPSLLSSTPDRFGPFPC*GVERRK Trigger: CTTCCTTCTTTCAACACCTCAACAAGGAAAAGGACC...GAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR GCA 90 bp | TGGAGCGGTACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGTCCCGGAGAAGAAACTaGAGGTCACGTCCACTGAGA | + |
Preference number: 4 (lower is better) Translates to: WSGTKLKPWTKDLRLWSESRRRN*RSRPLR Trigger: TCTCAGTGGACGTGACCTGCAGTTTCTTCTCCGGGA...CTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | CAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTCCCGCCGATGAAGACTTCTaGGTAAGGATGCTGGGATGT | + |
Preference number: 4 (lower is better) Translates to: QCCDSDWLCFQGHFPPPPADEDF*VRMLGC Trigger: ACATCCCAGCATCCTTACGCAGAAGTCTTCATCGGC...GGGAGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | GGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCGGAACACACAGTGCTTaGTCTTGGGGTAGAAGGAGG | + |
Preference number: 4 (lower is better) Translates to: GYVPFSCHLPSTPGIHQFGTHSA*SWGRRR Trigger: CCTCCTTCTACCCCAAGAGCAAGCACTGTGTGTTCC...GAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | GTGTGGGTCAGGGTCTTGAACTGGGGAAGAGGAATAGGAATGTGGAGAGACCCTGAGATCCGGATGTCATaGCCCAGCAGGTACAGAGAT | + |
Preference number: 4 (lower is better) Translates to: VWVRVLNWGRGIGMWRDPEIRMS*PSRYRD Trigger: ATCTCTGTACCTGCTGGGCCATGACATCCGGATCTC...AGGGTCTCTCCACATTCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CCA 90 bp | GCTCCACCAGGGCTGTGGGTGCCTTCTTTGCTGTCTTCCACACCTGACAGGTTCGAATGTTCTTGGTACTaGAGCCATAAACAGTGGCGT | + |
Preference number: 4 (lower is better) Translates to: APPGLWVPSLLSSTPDRFECSWY*SHKQWR Trigger: ACGCCACTGTTTATGGCTCCAGTACCAAGAACATTC...GAACCTGTCAGGTGTGGAAGACAGCAAAGAAGGCACCCACAGCCCTGGTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CCA 90 bp | AACCTGTTCCCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGAATGAGCTGGCTCTCCTaGCACACCTGTTTGCAGGAC | + |
Preference number: 4 (lower is better) Translates to: NLFPCGFGVNWDALAVAGMSWLS*HTCLQD Trigger: GTCCTGCAAACAGGTGTGCCAGGAGAGCCAGCTCAT...TCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGGAACAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | ACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGTCCCTGAATTTGCAGAGGGCCACTTaGCCCTTGATGAAGTCCCGG | + |
Preference number: 4 (lower is better) Translates to: TKLKPWTKDLRLWSESLNLQRAT*PLMKSR Trigger: CCGGGACTTCATCAAGGGCCAAGTGGCCCTCTGCAA...ATTCAGGGACTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | GGGTGGACAATGCTAACAGCAAGAGGTAGAAGAGGATaGGTTCACTCGCCAGCATGGAGAGAACTGTGGGAG | + |
Preference number: 4 (lower is better) Translates to: GWTMLTARGRRG*VHSPAWRELWE Trigger: CTCCCACAGTTCTCTCCATGCTGGCGAGTGAACCAATCCTCTTCTACCTCTTGCTGTTAGCATTGTCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 72 bp | AGTTTCCCCTTGATGGGTCACTTGGCCATCCATATCTaGCTAACTGAGGAGGCCTGGGAGCTGTCGTCCATT | + |
Preference number: 4 (lower is better) Translates to: SFPLMGHLAIHI*LTEEAWELSSI Trigger: AATGGACGACAGCTCCCAGGCCTCCTCAGTTAGCAAGATATGGATGGCCAAGTGACCCATCAAGGGGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 72 bp | TACACAGGTCAGGTCAGTTTCCCCTTGATGGGTCACTaGGCCATCCATATCTTGCTAACTGAGGAGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: YTGQVSFPLMGH*AIHILLTEEAW Trigger: CCAGGCCTCCTCAGTTAGCAAGATATGGATGGCCAAGTGACCCATCAAGGGGAAACTGACCTGACCTGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | AGGATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTGCATCATGCCCCAGATaGAGCCGAAAGTCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: RIGPKVLPNWLNSLFLFCASCPR*SRKSPG Trigger: TCCTGGTGACTTTCGGCTTCATCTGGGGCATGATGC...ACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | AACCTGTTCCCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGACTGTCTCCGCAATCTTaGAGCCCGATTCCTTGGTCA | + |
Preference number: 4 (lower is better) Translates to: NLFPCGFGVNWDALAVAGLSPQS*SPIPWS Trigger: TGACCAAGGAATCGGGCTTCAAGATTGCGGAGACAG...TCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGGAACAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | GGAATGGGATTTATAACACGGGAGAAAGAGCTCTTCTGGGTTGTGTGGGTCAGGGGTCTTGTGGCCTTTTaGCTGGGCATAGCTCGCATG | + |
Preference number: 4 (lower is better) Translates to: GMGFITREKELFWVVWVRGLVAF*LGIARM Trigger: CATGCGAGCTATGCCCAGTCAAAAGGCCACAAGACC...CCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCGTGTTATAAATCCCATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CCA 90 bp | GTGTGGGTCAGGGTCTTGAACTGGGGAAGAGGAATAGGAATGTGGAGAGACCCTGGGTATGAGGGAACATaGTGTAAAACTGCTGCGGGT | + |
Preference number: 4 (lower is better) Translates to: VWVRVLNWGRGIGMWRDPGYEGT*CKTAAG Trigger: ACCCGCAGCAGTTTTACACCATGTTCCCTCATACCC...AGGGTCTCTCCACATTCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CCA 90 bp | TGGAGCGGTACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGTGGAGCCATAAACAGTaGCGTGCACTTCCATGTACG | + |
Preference number: 4 (lower is better) Translates to: WSGTKLKPWTKDLRLWSEWSHKQ*RALPCT Trigger: CGTACATGGAAGTGCACGCCACTGTTTATGGCTCCA...CTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGAGTTAATTGAATGTTCTTGGTACTaGAGCCATAAACAGTGGCGT | + |
Preference number: 4 (lower is better) Translates to: LCPLALPSGATSFPSELIECSWY*SHKQWR Trigger: ACGCCACTGTTTATGGCTCCAGTACCAAGAACATTC...AATTAACTCAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | GGAATGGGATTTATAACACGGGAGAAAGAGCTCTTCTGGGTTGTGTGGGTCAGGATGAGCTGGCTCTCCTaGCACACCTGTTTGCAGGAC | + |
Preference number: 4 (lower is better) Translates to: GMGFITREKELFWVVWVRMSWLS*HTCLQD Trigger: GTCCTGCAAACAGGTGTGCCAGGAGAGCCAGCTCAT...CCTGACCCACACAACCCAGAAGAGCTCTTTCTCCCGTGTTATAAATCCCATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
CDS-3UTR CCA 90 bp | TTATGTAGCCAAGGAGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTCGCTGGTGTGTGGGGTaGGCTCCGGCACAACTGAAG | + |
Preference number: 4 (lower is better) Translates to: LCSQGECLVLLTLFLTCIRWCVG*APAQLK Trigger: CTTCAGTTGTGCCGGAGCCCACCCCACACACCAGCG...AATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCTCCTTGGCTACATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
CDS-3UTR TCA 90 bp | AACCTGTTCCCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGAAAAAAGCCCAGCTTCTaGGAGGACAACTTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: NLFPCGFGVNWDALAVAGKKPSF*EDNFQG Trigger: TCCCTGGAAGTTGTCCTCTCAGAAGCTGGGCTTTTT...TCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGGAACAGGTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
CDS-3UTR TCA 90 bp | AGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGTCGCTCCTGTGCCGTTaGCCAGATTGTCCACCTTTG | + |
Preference number: 4 (lower is better) Translates to: RMLGPPDSVSYLHLCGAGSLLCR*PDCPPL Trigger: CAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGA...CCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | TTTCTTACCTGCATTTATGTGGTGCTGGGGATGGAACCCAGGACTTCATTTATGCCAGAGGGCCACCGCTaGATGCTGTCTCCGCAATCT | + |
Preference number: 4 (lower is better) Translates to: FLTCIYVVLGMEPRTSFMPEGHR*MLSPQS Trigger: AGATTGCGGAGACAGCATTCAGCGGTGGCCCTCTGG...CATAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | ATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCGCAGGTACAGAGATGTaGTTAAGTCACTCCACTGAA | + |
Preference number: 4 (lower is better) Translates to: MCLLAAICQAHLGSTSSGAGTEM*LSHSTE Trigger: TTCAGTGGAGTGACTTAATCACATCTCTGTACCTGC...GCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | TACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTTTGGTACCTGTTTGCAGGACTaGCCTGGCTCAGCCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: YIEENPGSCSNLFPCGFGTCLQD*PGSASF Trigger: GAAGCTGGCTGAGCCAGGGCAGTCCTGCAAACAGGT...ACCAAAACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
CDS-3UTR GCA 90 bp | AGGATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTGGAACACACAGTGCTTaGTCTTGGGGTAGAAGGAGG | + |
Preference number: 4 (lower is better) Translates to: RIGPKVLPNWLNSLFLFCGTHSA*SWGRRR Trigger: CCTCCTTCTACCCCAAGAGCAAGCACTGTGTGTTCC...ACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TTATGTAGCCAAGGAGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTAGCTGGGGACAGCCGTaGTGGAGTTGGTGGAGTTCG | + |
Preference number: 4 (lower is better) Translates to: LCSQGECLVLLTLFLTCISWGQP*WSWWSS Trigger: CGAACTCCACCAACTCCACCACGGCTGTCCCCAGCT...AATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCTCCTTGGCTACATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
||
CDS-3UTR CCA 90 bp | TGGCAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTAGAGACTTGATAGCTTaGATCCACGCGTCAGCCATT | + |
Preference number: 4 (lower is better) Translates to: WQCCDSDWLCFQGHFPPPRDLIA*IHASAI Trigger: AATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCT...AGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | GTGTGGGTCAGGGTCTTGAACTGGGGAAGAGGAATAGGAATGTGGAGAGACCCTCAGCTCTCTCAGTGTTaGCTTGCCAATGAAGAAGTC | + |
Preference number: 4 (lower is better) Translates to: VWVRVLNWGRGIGMWRDPQLSQC*LANEEV Trigger: GACTTCTTCATTGGCAAGCCAACACTGAGAGAGCTG...AGGGTCTCTCCACATTCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
3UTR CAA 72 bp | CGCTCGATCTCCCAGACAGAGAGGACATTCCTTACATaGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCC | + |
Preference number: 4 (lower is better) Translates to: RSISQTERTFLT*RRTQVPVLTCS Trigger: GGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTAAGGAATGTCCTCTCTGTCTGGGAGATCGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | GAGAAAGAGCTCTTCTGGGTTGTGTGGGTCAGGGTCTaGAACTGGGGAAGAGGAATAGGAATGTGGAGAGAC | + |
Preference number: 4 (lower is better) Translates to: EKELFWVVWVRV*NWGRGIGMWRD Trigger: GTCTCTCCACATTCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACACAACCCAGAAGAGCTCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | AGGATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTAAAAAGCCCAGCTTCTaGGAGGACAACTTCCAGGGA | + |
Preference number: 4 (lower is better) Translates to: RIGPKVLPNWLNSLFLFCKKPSF*EDNFQG Trigger: TCCCTGGAAGTTGTCCTCTCAGAAGCTGGGCTTTTT...ACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | AGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGCAGATTGTCCACCTTTaGCTCGAGCTTGCCAATGCG | + |
Preference number: 4 (lower is better) Translates to: RMLGPPDSVSYLHLCGAGQIVHL*LELANA Trigger: CGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTG...CCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | AGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGTGTCCTTCATCCACTTaGTTTTCCCCTCGCAGTGGG | + |
Preference number: 4 (lower is better) Translates to: RMLGPPDSVSYLHLCGAGCPSST*FSPRSG Trigger: CCCACTGCGAGGGGAAAATCAAGTGGATGAAGGACA...CCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | TGGCAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTGCAGGTACAGAGATGTaGTTAAGTCACTCCACTGAA | + |
Preference number: 4 (lower is better) Translates to: WQCCDSDWLCFQGHFPPPAGTEM*LSHSTE Trigger: TTCAGTGGAGTGACTTAATCACATCTCTGTACCTGC...AGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | AGGATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTGTCCTTGTACAGTTCTaGGCTTTGGCAGGTCACCTT | + |
Preference number: 4 (lower is better) Translates to: RIGPKVLPNWLNSLFLFCVLVQF*ALAGHL Trigger: AAGGTGACCTGCCAAAGCTCAGAACTGTACAAGGAC...ACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | CAAGGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGACAAGGGACTGGTTCTaGCTTTTGATCTCGTTGATG | + |
Preference number: 4 (lower is better) Translates to: QGYVPFSCHLPSTPGIHQTRDWF*LLISLM Trigger: CATCAACGAGATCAAAAGGCAGAACCAGTCCCTTGT...CTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | GGTAGGAGAGTTTTTGGGCCACTCACAGGATTAATCTaGGGTAGGATGGGAATGTGGCAGAGGTGTAACCAG | + |
Preference number: 4 (lower is better) Translates to: GRRVFGPLTGLI*GRMGMWQRCNQ Trigger: CTGGTTACACCTCTGCCACATTCCCATCCTACCCAAGATTAATCCTGTGAGTGGCCCAAAAACTCTCCTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | TCAAAAGGTCCCTCAAAGAAACCCCTGGAATGTTCCAGAACATATTGGTGGTTCGCATCATGCCCCAGATaGAGCCGAAAGTCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: SKGPSKKPLECSRTYWWFASCPR*SRKSPG Trigger: TCCTGGTGACTTTCGGCTTCATCTGGGGCATGATGC...GAACCACCAATATGTTCTGGAACATTCCAGGGGTTTCTTTGAGGGACCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | TACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTTTGGTGTCAGGAGCCCCAGGTaGACAAGGATTTTCTTCCGT | + |
Preference number: 4 (lower is better) Translates to: YIEENPGSCSNLFPCGFGVRSPR*TRIFFR Trigger: ACGGAAGAAAATCCTTGTTCACCTGGGGCTCCTGAC...ACCAAAACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | GATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTTTTGCTTTTGGGAGGGTTaGACTTGGGGTTCAGGAAAG | + |
Preference number: 4 (lower is better) Translates to: DRPQSPSQLAQFPLPVLFCFWEG*TWGSGK Trigger: CTTTCCTGAACCCCAAGTTCAACCCTCCCAAAAGCA...AAACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | GATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTTTTCCTTGTTGAGGTGTTaGAAGAAGGAAGGCTCGCAG | + |
Preference number: 4 (lower is better) Translates to: DRPQSPSQLAQFPLPVLFSLLRC*KKEGSQ Trigger: CTGCGAGCCTTCCTTCTTTCAACACCTCAACAAGGA...AAACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | TACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTTTGGTTGCTGGATGGTGAAGTaGAGAAGCATCATGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: YIEENPGSCSNLFPCGFGCWMVK*RSIMPQ Trigger: CTGGGGCATGATGCTTCTGCACTTCACCATCCAGCA...ACCAAAACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | ATTCCTTACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTCCTTTGACTCGAGCTTaGCAATGCGCTGCAGGATGT | + |
Preference number: 4 (lower is better) Translates to: IPYIEENPGSCSNLFPCGPLTRA*QCAAGC Trigger: ACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGG...ACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTAAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR GCA 90 bp | TGGAGCGGTACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGAGAAACTATCCACTTTaGCATACACAAGGGACTGGT | + |
Preference number: 4 (lower is better) Translates to: WSGTKLKPWTKDLRLWSERNYPL*HTQGTG Trigger: ACCAGTCCCTTGTGTATGGCAAAGTGGATAGTTTCT...CTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | AGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGGGGTATGAGGGAACATaGTGTAAAACTGCTGCGGGT | + |
Preference number: 4 (lower is better) Translates to: RMLGPPDSVSYLHLCGAGGYEGT*CKTAAG Trigger: ACCCGCAGCAGTTTTACACCATGTTCCCTCATACCC...CCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | ATTCCTTACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTGTGGTGAATGTCGCTaGAGTTCAGGTGCTGCTCCA | + |
Preference number: 4 (lower is better) Translates to: IPYIEENPGSCSNLFPCGCGECR*SSGAAP Trigger: TGGAGCAGCACCTGAACTCCAGCGACATTCACCACA...ACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTAAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | AGGATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTCCATACACAAGGGACTaGTTCTGCCTTTTGATCTCG | + |
Preference number: 4 (lower is better) Translates to: RIGPKVLPNWLNSLFLFCPYTRD*FCLLIS Trigger: CGAGATCAAAAGGCAGAACCAGTCCCTTGTGTATGG...ACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | ATTCTTACCCAAATCCTTCTCCAAGTTCAAGGACAGCTCCTGGAGCCTACGATGTGGAGCCATAAACAGTaGCGTGCACTTCCATGTACG | + |
Preference number: 4 (lower is better) Translates to: ILTQILLQVQGQLLEPTMWSHKQ*RALPCT Trigger: CGTACATGGAAGTGCACGCCACTGTTTATGGCTCCA...CATCGTAGGCTCCAGGAGCTGTCCTTGAACTTGGAGAAGGATTTGGGTAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CCA 90 bp | GGCCCGAAGGTGGGCGAATTAACAGTGAGGAACAAAAGGAAACTGTTCAACCCCCACATCACTTGGCCATaGCAGAAGTCCTGTTTTTCA | + |
Preference number: 4 (lower is better) Translates to: GPKVGELTVRNKRKLFNPHITWP*QKSCFS Trigger: TGAAAAACAGGACTTCTGCCATGGCCAAGTGATGTG...GGGGTTGAACAGTTTCCTTTTGTTCCTCACTGTTAATTCGCCCACCTTCGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TGTTTCTTACCTGCATTTATGTGGTGCTGGGGATGGAACCCAGGACTTCATTTACACAGTGCTTGCTCTTaGGGTAGAAGGAGGGCACCA | + |
Preference number: 4 (lower is better) Translates to: CFLPAFMWCWGWNPGLHLHSACS*GRRRAP Trigger: TGGTGCCCTCCTTCTACCCCAAGAGCAAGCACTGTG...TAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | GTTCAATGCCCATACACAGGTCAGGTCAGTTTCCCCTaGATGGGTCACTTGGCCATCCATATCTTGCTAACT | + |
Preference number: 4 (lower is better) Translates to: VQCPYTGQVSFP*MGHLAIHILLT Trigger: AGTTAGCAAGATATGGATGGCCAAGTGACCCATCAAGGGGAAACTGACCTGACCTGTGTATGGGCATTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | TGTTTCTTACCTGCATTTATGTGGTGCTGGGGATGGAACCCAGGACTTCATTTACAGATTGTCCACCTTTaGCTCGAGCTTGCCAATGCG | + |
Preference number: 4 (lower is better) Translates to: CFLPAFMWCWGWNPGLHLQIVHL*LELANA Trigger: CGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTG...TAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | TTTCTTACCTGCATTTATGTGGTGCTGGGGATGGAACCCAGGACTTCATTTATGGTCAGGAGCCCCAGGTaGACAAGGATTTTCTTCCGT | + |
Preference number: 4 (lower is better) Translates to: FLTCIYVVLGMEPRTSFMVRSPR*TRIFFR Trigger: ACGGAAGAAAATCCTTGTTCACCTGGGGCTCCTGAC...CATAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | ACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGTCCCTGAATGTGTTGGCTTGCCAATaGAGAAGTCTGTGTTTTTGC | + |
Preference number: 4 (lower is better) Translates to: TKLKPWTKDLRLWSESLNVLACQ*RSLCFC Trigger: GCAAAAACACAGACTTCTTCATTGGCAAGCCAACAC...ATTCAGGGACTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | AGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGCCATACACAAGGGACTaGTTCTGCCTTTTGATCTCG | + |
Preference number: 4 (lower is better) Translates to: RMLGPPDSVSYLHLCGAGPYTRD*FCLLIS Trigger: CGAGATCAAAAGGCAGAACCAGTCCCTTGTGTATGG...CCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR TCA 90 bp | CAAGGTTATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGAGTGTTTTCTTAAATTaGGCAAGTCCCACAATATCG | + |
Preference number: 4 (lower is better) Translates to: QGYVPFSCHLPSTPGIHQSVFLN*ASPTIS Trigger: CGATATTGTGGGACTTGCTCAATTTAAGAAAACACT...CTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACATAACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTTTGGTCAGAAAGCTGTTGTCTaGGGTATGAGGGAACATGGT | + |
Preference number: 4 (lower is better) Translates to: YIEENPGSCSNLFPCGFGQKAVV*GMREHG Trigger: ACCATGTTCCCTCATACCCCAGACAACAGCTTTCTG...ACCAAAACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTTTGGTCAGCTCTCTCAGTGTTaGCTTGCCAATGAAGAAGTC | + |
Preference number: 4 (lower is better) Translates to: YIEENPGSCSNLFPCGFGQLSQC*LANEEV Trigger: GACTTCTTCATTGGCAAGCCAACACTGAGAGAGCTG...ACCAAAACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | AGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGCACATCACTTGGCCATaGCAGAAGTCCTGTTTTTCA | + |
Preference number: 4 (lower is better) Translates to: RMLGPPDSVSYLHLCGAGHITWP*QKSCFS Trigger: TGAAAAACAGGACTTCTGCCATGGCCAAGTGATGTG...CCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CCA 90 bp | TGTTTCTTACCTGCATTTATGTGGTGCTGGGGATGGAACCCAGGACTTCATTTACAGAAAGCTGTTGTCTaGGGTATGAGGGAACATGGT | + |
Preference number: 4 (lower is better) Translates to: CFLPAFMWCWGWNPGLHLQKAVV*GMREHG Trigger: ACCATGTTCCCTCATACCCCAGACAACAGCTTTCTG...TAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | GAAGTGACAGTAGAAAACAAGCGAACCAGGATCCATTaGAAGACACAGACGTCAACGGCCATGAGCTTAACA | + |
Preference number: 4 (lower is better) Translates to: EVTVENKRTRIH*KTQTSTAMSLT Trigger: TGTTAAGCTCATGGCCGTTGACGTCTGTGTCTTCAAATGGATCCTGGTTCGCTTGTTTTCTACTGTCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
||
CDS-3UTR GCA 90 bp | TCCCAGCCAAAGAACAGACAGCTATTTCCAAACACTCACCTAAAACAAACGATTGCCGATGAAGACTTCTaGGTAAGGATGCTGGGATGT | + |
Preference number: 4 (lower is better) Translates to: SQPKNRQLFPNTHLKQTIADEDF*VRMLGC Trigger: ACATCCCAGCATCCTTACGCAGAAGTCTTCATCGGC...AATCGTTTGTTTTAGGTGAGTGTTTGGAAATAGCTGTCTGTTCTTTGGCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 72 bp | CACCTATTGCTAATTCTCTTAATAACTAGACTAGGCTaGGTTAGTCCCAAGAGCAGGAACACACCAGAGGAA | + |
Preference number: 4 (lower is better) Translates to: HLLLILLITRLG*VSPKSRNTPEE Trigger: TTCCTCTGGTGTGTTCCTGCTCTTGGGACTAACCAAGCCTAGTCTAGTTATTAAGAGAATTAGCAATAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR TCA 90 bp | AGCATTCTACAAACTGAGCTACATCCCCCTGCTTATAGACATCTCTTTTCTCTGAGTGTTTTCTTAAATTaGGCAAGTCCCACAATATCG | + |
Preference number: 4 (lower is better) Translates to: SILQTELHPPAYRHLFSLSVFLN*ASPTIS Trigger: CGATATTGTGGGACTTGCTCAATTTAAGAAAACACT...CAGAGAAAAGAGATGTCTATAAGCAGGGGGATGTAGCTCAGTTTGTAGAATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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3UTR CAA 72 bp | TCCCTCAAAGAAACCCCTGGAATGTTCCAGAACATATaGGTGGTTCAATTTCAGGTAATAAATTCAGCCTTG | + |
Preference number: 4 (lower is better) Translates to: SLKETPGMFQNI*VVQFQVINSAL Trigger: CAAGGCTGAATTTATTACCTGAAATTGAACCACCAATATGTTCTGGAACATTCCAGGGGTTTCTTTGAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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3UTR CAA 72 bp | ATATTGGTGGTTCAATTTCAGGTAATAAATTCAGCCTaGTTTCACAGAGTGCTGAAGACTGGCAAATTTCCC | + |
Preference number: 4 (lower is better) Translates to: ILVVQFQVINSA*FHRVLKTGKFP Trigger: GGGAAATTTGCCAGTCTTCAGCACTCTGTGAAACAAGGCTGAATTTATTACCTGAAATTGAACCACCAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS GCA 90 bp | GGCTCGCAGATGAGCTGGCTCTCCTGGCACACCTGTTTGCAGGACTaGCCTGGCTCAGCCAGCTTCACCTGCAGGGCGCTGAGGGGCGGC | + |
Preference number: 5 (lower is better) Translates to: GSQMSWLSWHTCLQD*PGSASFTCRALRGG Trigger: GCCGCCCCTCAGCGCCCTGCAGGTGAAGCTGGCTGAGCCAGGGCAGTCCTGCAAACAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS GCA 90 bp | TGGCACACCTGTTTGCAGGACTGCCCTGGCTCAGCCAGCTTCACCTaGAGGGCGCTGAGGGGCGGCCACATCACTTGGCCATGGCAGAAG | + |
Preference number: 5 (lower is better) Translates to: WHTCLQDCPGSASFT*RALRGGHITWPWQK Trigger: CTTCTGCCATGGCCAAGTGATGTGGCCGCCCCTCAGCGCCCTGCAGGTGAAGCTGGCTGAGCCAGGGCAGTCCTGCAAACAGGTGTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 90 bp | CTGAGGTCAAGGATCTGCTCCCGTAACATGGAGCTGCTCTCGGGCTaGGTCCGCTGCTGGATGGTGAAGTGCAGAAGCATCATGCCCCAG | + |
Preference number: 5 (lower is better) Translates to: LRSRICSRNMELLSG*VRCWMVKCRSIMPQ Trigger: CTGGGGCATGATGCTTCTGCACTTCACCATCCAGCAGCGGACTCAGCCCGAGAGCAGCTCCATGTTACGGGAGCAGATCCTTGACCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 90 bp | TGGGGACAGCCGTGGTGGAGTTGGTGGAGTTCGCTCCTGTGCCGTTaGCCAGATTGTCCACCTTTGACTCGAGCTTGCCAATGCGCTGCA | + |
Preference number: 5 (lower is better) Translates to: WGQPWWSWWSSLLCR*PDCPPLTRACQCAA Trigger: TGCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAACTCCACCAACTCCACCACGGCTGTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GTGTGGGTCAGGGTCTTGAACTGGGGAAGAGGAATAGGAATGTGGAGAGACCCTGGGCGGCCACATCACTaGGCCATGGCAGAAGTCCTG | + |
Preference number: 5 (lower is better) Translates to: VWVRVLNWGRGIGMWRDPGRPHH*AMAEVL Trigger: CAGGACTTCTGCCATGGCCAAGTGATGTGGCCGCCC...AGGGTCTCTCCACATTCCTATTCCTCTTCCCCAGTTCAAGACCCTGACCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CAA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACGAGCAGGAGGTCCCCTaGGAACACACAGTGCTTGCT | + |
Preference number: 5 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDEQEVP*EHTVLA Trigger: AGCAAGCACTGTGTGTTCCAAGGGGACCTCCTGCTC...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS GCA 90 bp | CATGACACCAGCGTAGGGGCCATCCACCACGTCCCTGTTCTCCTCTaGCAGTGCCTTAATGTACCTCTTGCTGAGGTCAAGGATCTGCTC | + |
Preference number: 5 (lower is better) Translates to: HDTSVGAIHHVPVLL*QCLNVPLAEVKDLL Trigger: GAGCAGATCCTTGACCTCAGCAAGAGGTACATTAAGGCACTGGCAGAGGAGAACAGGGACGTGGTGGATGGCCCCTACGCTGGTGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGACCTTTGACTCGAGCTaGCCAATGCGCTGCAGGATG | + |
Preference number: 5 (lower is better) Translates to: AICQAHLGSTSSGNAVTVTFDSS*PMRCRM Trigger: CATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGT...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | CATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCCCCCAGATTGTCCACCTTaGACTCGAGCTTGCCAATGC | + |
Preference number: 5 (lower is better) Translates to: HLFSLLPPVTRSEAPQWPPDCPP*TRACQC Trigger: GCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGG...GGGCCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGTTCTCCGCCAGAGACTaGATAGCTTGGATCCACGCG | + |
Preference number: 5 (lower is better) Translates to: AICQAHLGSTSSGNAVTVFSARD*IAWIHA Trigger: CGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAA...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GAATGTCTTTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGTTCTTCATTATCTCCTaGAGCTCAGCCAGTGAGGCC | + |
Preference number: 5 (lower is better) Translates to: ECLCAPWPCPVEPRLSRLFFIIS*SSASEA Trigger: GGCCTCACTGGCTGAGCTCAAGGAGATAATGAAGAA...CAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | CATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCCCTTCTGTCTCCTACAGTaGGACAGCCAGACCGGTTTC | + |
Preference number: 5 (lower is better) Translates to: HLFSLLPPVTRSEAPQWPFCLLQ*DSQTGF Trigger: GAAACCGGTCTGGCTGTCCAACTGTAGGAGACAGAA...GGGCCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 90 bp | TATCCAGCAAGACGGCGAGCGTTTTCTTCAGATCATAGGCTGTCATaGCACCAGCGTAGGGGCCATCCACCACGTCCCTGTTCTCCTCTG | + |
Preference number: 5 (lower is better) Translates to: YPARRRAFSSDHRLS*HQRRGHPPRPCSPL Trigger: CAGAGGAGAACAGGGACGTGGTGGATGGCCCCTACGCTGGTGTCATGACAGCCTATGATCTGAAGAAAACGCTCGCCGTCTTGCTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 90 bp | CCCAGGGGGTCTTGTGGCCTTTTGACTGGGCATAGCTCGCATGATTaGACTCAGGTTCTGTTCCAAAGGAGTCTAGCACCCGGAGCATGC | + |
Preference number: 5 (lower is better) Translates to: PRGSCGLLTGHSSHD*TQVLFQRSLAPGAC Trigger: GCATGCTCCGGGTGCTAGACTCCTTTGGAACAGAACCTGAGTTCAATCATGCGAGCTATGCCCAGTCAAAAGGCCACAAGACCCCCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GAATGTCTTTGTGCCCCTTGGCCCTGCCCAGTGGAGCCACGTCTTTCCCGTCTGCAGAAACTATCCACTTaGCCATACACAAGGGACTGG | + |
Preference number: 5 (lower is better) Translates to: ECLCAPWPCPVEPRLSRLQKLST*PYTRDW Trigger: CCAGTCCCTTGTGTATGGCAAAGTGGATAGTTTCTG...CAGACGGGAAAGACGTGGCTCCACTGGGCAGGGCCAAGGGGCACAAAGACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGGGCACCAGGATGTCCTaGTACAGTTCTGAGCTTTGG | + |
Preference number: 5 (lower is better) Translates to: AICQAHLGSTSSGNAVTVGTRMS*YSSELW Trigger: CCAAAGCTCAGAACTGTACAAGGACATCCTGGTGCC...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTTTAGGGCCACTTGGCCCTaGATGAAGTCCCGGCAGGGG | + |
Preference number: 5 (lower is better) Translates to: DRPQSPSQLAQFPLPVLFRATWP*MKSRQG Trigger: CCCCTGCCGGGACTTCATCAAGGGCCAAGTGGCCCT...AAACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 90 bp | GTTGGTGGAGTTCGCTCCTGTGCCGTTGACCAGATTGTCCACCTTTaGCTCGAGCTTGCCAATGCGCTGCAGGATGTTATCCAGCAAGAC | + |
Preference number: 5 (lower is better) Translates to: VGGVRSCAVDQIVHL*LELANALQDVIQQD Trigger: GTCTTGCTGGATAACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAACTCCACCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | TGGAGCGGTACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGACCTTTGACTCGAGCTaGCCAATGCGCTGCAGGATG | + |
Preference number: 5 (lower is better) Translates to: WSGTKLKPWTKDLRLWSETFDSS*PMRCRM Trigger: CATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGT...CTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | CCAGAAATTAGGACCAAGCTATGTAGGGGGAGGGGGAGGAAGGGACACACACACCAGAGACTTGATAGCTaGGATCCACGCGTCAGCCAT | + |
Preference number: 5 (lower is better) Translates to: PEIRTKLCRGRGRKGHTHQRLDS*DPRVSH Trigger: ATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCTG...GTGTGTGTGTCCCTTCCTCCCCCTCCCCCTACATAGCTTGGTCCTAATTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CAA 90 bp | TGGAGCGGTACTAAACTCAAGCCCTGGACCAAAGATCTCAGGCTCTGGTCAGAGGCTGTCTCCGCAATCTaGAAGCCCGATTCCTTGGTC | + |
Preference number: 5 (lower is better) Translates to: WSGTKLKPWTKDLRLWSEAVSAI*KPDSLV Trigger: GACCAAGGAATCGGGCTTCAAGATTGCGGAGACAGC...CTCTGACCAGAGCCTGAGATCTTTGGTCCAGGGCTTGAGTTTAGTACCGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | CAATGCTGTGACAGTGACTGGCTGTGTTTTCAAGGCCATTTCCCTCCCCCTCCCAGCCCAACGAACAGCTaGGTTTCCCGGAGAAGAAAC | + |
Preference number: 5 (lower is better) Translates to: QCCDSDWLCFQGHFPPPPSPTNS*VSRRRN Trigger: GTTTCTTCTCCGGGAAACCAAGCTGTTCGTTGGGCT...GGGAGGGGGAGGGAAATGGCCTTGAAAACACAGCCAGTCACTGTCACAGCATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | ATGTGCCTTTTAGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAGCCCAACGAACAGCTaGGTTTCCCGGAGAAGAAAC | + |
Preference number: 5 (lower is better) Translates to: MCLLAAICQAHLGSTSSGSPTNS*VSRRRN Trigger: GTTTCTTCTCCGGGAAACCAAGCTGTTCGTTGGGCT...GCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCTAAAAGGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACAGTGCTGCTTTTGGGAGGGTaGAACTTGGGGTTCAGGAAA | + |
Preference number: 5 (lower is better) Translates to: AICQAHLGSTSSGNAVTVLLLGG*NLGFRK Trigger: TTTCCTGAACCCCAAGTTCAACCCTCCCAAAAGCAG...CACTGTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 90 bp | CCGGTTTCCAACAACCTTCTTCATTATCTCCTTGAGCTCAGCCAGTaGGGCCGAGATCCGGATGTCATGGCCCAGCAGGTACAGAGATGT | + |
Preference number: 5 (lower is better) Translates to: PVSNNLLHYLLELSQ*GRDPDVMAQQVQRC Trigger: ACATCTCTGTACCTGCTGGGCCATGACATCCGGATCTCGGCCTCACTGGCTGAGCTCAAGGAGATAATGAAGAAGGTTGTTGGAAACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | CCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGAGCGGTACTACCAGATTGTCCACCTTaGACTCGAGCTTGCCAATGC | + |
Preference number: 5 (lower is better) Translates to: PCGFGVNWDALAVAGAVLPDCPP*TRACQC Trigger: GCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGG...TAGTACCGCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | AACCTGTTCCCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGATTCTCCGCCAGAGACTaGATAGCTTGGATCCACGCG | + |
Preference number: 5 (lower is better) Translates to: NLFPCGFGVNWDALAVAGFSARD*IAWIHA Trigger: CGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAA...TCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGGAACAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | TACATTGAGGAGAACCCAGGTTCCTGTTCTAACCTGTTCCCTTGTGGTTTTGGTGGGCGGCCACATCACTaGGCCATGGCAGAAGTCCTG | + |
Preference number: 5 (lower is better) Translates to: YIEENPGSCSNLFPCGFGGRPHH*AMAEVL Trigger: CAGGACTTCTGCCATGGCCAAGTGATGTGGCCGCCC...ACCAAAACCACAAGGGAACAGGTTAGAACAGGAACCTGGGTTCTCCTCAATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 90 bp | CAGGTCACCTTATACTTCAGCAGGTCCTTTTCCTTGTTGAGGTGTTaGAAGAAGGAAGGCTCGCAGATGAGCTGGCTCTCCTGGCACACC | + |
Preference number: 5 (lower is better) Translates to: QVTLYFSRSFSLLRC*KKEGSQMSWLSWHT Trigger: GGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCCTTCTTTCAACACCTCAACAAGGAAAAGGACCTGCTGAAGTATAAGGTGACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS GCA 90 bp | CCGTTGACCAGATTGTCCACCTTTGACTCGAGCTTGCCAATGCGCTaGAGGATGTTATCCAGCAAGACGGCGAGCGTTTTCTTCAGATCA | + |
Preference number: 5 (lower is better) Translates to: PLTRLSTFDSSLPMR*RMLSSKTASVFFRS Trigger: TGATCTGAAGAAAACGCTCGCCGTCTTGCTGGATAACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 90 bp | TTCCTCTTCTCAAGGTTTTGTTTCTCCGCCAGAGACTTGATAGCTTaGATCCACGCGTCAGCCATTCGCCGGATCCGAAGCCTCATCCAA | + |
Preference number: 5 (lower is better) Translates to: FLFSRFCFSARDLIA*IHASAIRRIRSLIQ Trigger: TTGGATGAGGCTTCGGATCCGGCGAATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAAACAAAACCTTGAGAAGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | AACCTGTTCCCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGACAGAGACTTGATAGCTaGGATCCACGCGTCAGCCAT | + |
Preference number: 5 (lower is better) Translates to: NLFPCGFGVNWDALAVAGQRLDS*DPRVSH Trigger: ATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCTG...TCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGGAACAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | CCTTGTGGTTTTGGTGTAAACTGGGATGCACTGGCTGTGGCTGGAGCGGTACTATTCTTCATTATCTCCTaGAGCTCAGCCAGTGAGGCC | + |
Preference number: 5 (lower is better) Translates to: PCGFGVNWDALAVAGAVLFFIIS*SSASEA Trigger: GGCCTCACTGGCTGAGCTCAAGGAGATAATGAAGAA...TAGTACCGCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | AGACATCTCTTTTCTCTGCTGCCACCTGTGACCAGGAGTGAAGCCCCACAGTGGCAGAAACTATCCACTTaGCCATACACAAGGGACTGG | + |
Preference number: 5 (lower is better) Translates to: RHLFSLLPPVTRSEAPQWQKLST*PYTRDW Trigger: CCAGTCCCTTGTGTATGGCAAAGTGGATAGTTTCTG...CCACTGTGGGGCTTCACTCCTGGTCACAGGTGGCAGCAGAGAAAAGAGATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | AGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTTATGTGGTGCTGGGTTTGCAGAGGGCCACTaGGCCCTTGATGAAGTCCCG | + |
Preference number: 5 (lower is better) Translates to: RMLGPPDSVSYLHLCGAGFAEGH*ALDEVP Trigger: CGGGACTTCATCAAGGGCCAAGTGGCCCTCTGCAAA...CCCAGCACCACATAAATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | TTTCTTACCTGCATTTATGTGGTGCTGGGGATGGAACCCAGGACTTCATTTATGACAGCCGTGGTGGAGTaGGTGGAGTTCGCTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: FLTCIYVVLGMEPRTSFMTAVVE*VEFAPV Trigger: CACAGGAGCGAACTCCACCAACTCCACCACGGCTGT...CATAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | AGCTGCCATCTGCCAAGCACACCTGGGATCCACCAGTTCTGGCAATGCTGTGACCTTCATAGGGATTTTTaGCTCTCCAAGGTAAACGAG | + |
Preference number: 5 (lower is better) Translates to: SCHLPSTPGIHQFWQCCDLHRDF*LSKVNE Trigger: CTCGTTTACCTTGGAGAGCAAAAAATCCCTATGAAG...GTCACAGCATTGCCAGAACTGGTGGATCCCAGGTGTGCTTGGCAGATGGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | AGGATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTTTCTGTCTCCTACAGTaGGACAGCCAGACCGGTTTC | + |
Preference number: 5 (lower is better) Translates to: RIGPKVLPNWLNSLFLFCFCLLQ*DSQTGF Trigger: GAAACCGGTCTGGCTGTCCAACTGTAGGAGACAGAA...ACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GGCCCGAAGGTGGGCGAATTAACAGTGAGGAACAAAAGGAAACTGTTCAACCCCTTGGGAGGGTTGAACTaGGGGTTCAGGAAAGCACAT | + |
Preference number: 5 (lower is better) Translates to: GPKVGELTVRNKRKLFNPLGGLN*GFRKAH Trigger: ATGTGCTTTCCTGAACCCCAAGTTCAACCCTCCCAA...GGGGTTGAACAGTTTCCTTTTGTTCCTCACTGTTAATTCGCCCACCTTCGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GGCCCGAAGGTGGGCGAATTAACAGTGAGGAACAAAAGGAAACTGTTCAACCCCCTGCTTTTGGGAGGGTaGAACTTGGGGTTCAGGAAA | + |
Preference number: 5 (lower is better) Translates to: GPKVGELTVRNKRKLFNPLLLGG*NLGFRK Trigger: TTTCCTGAACCCCAAGTTCAACCCTCCCAAAAGCAG...GGGGTTGAACAGTTTCCTTTTGTTCCTCACTGTTAATTCGCCCACCTTCGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | GATCGGCCCCAAAGTCCTTCCCAATTGGCTCAATTCCCTCTTCCTGTTTTGTTTGGCACCAGGATGTCCTaGTACAGTTCTGAGCTTTGG | + |
Preference number: 5 (lower is better) Translates to: DRPQSPSQLAQFPLPVLFGTRMS*YSSELW Trigger: CCAAAGCTCAGAACTGTACAAGGACATCCTGGTGCC...AAACAAAACAGGAAGAGGGAATTGAGCCAATTGGGAAGGACTTTGGGGCCGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | TCAAAAGGTCCCTCAAAGAAACCCCTGGAATGTTCCAGAACATATTGGTGGTTCGAGCAGGAGGTCCCCTaGGAACACACAGTGCTTGCT | + |
Preference number: 5 (lower is better) Translates to: SKGPSKKPLECSRTYWWFEQEVP*EHTVLA Trigger: AGCAAGCACTGTGTGTTCCAAGGGGACCTCCTGCTC...GAACCACCAATATGTTCTGGAACATTCCAGGGGTTTCTTTGAGGGACCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS TCA 90 bp | CGAACAGCTTGGTTTCCCGGAGAAGAAACTGCAGGTCACGTCCACTaGGAATGCCATGGTTTTTCACGTAACTGGGAATGTTCTTGGTAC | + |
Preference number: 5 (lower is better) Translates to: RTAWFPGEETAGHVH*ECHGFSRNWECSWY Trigger: GTACCAAGAACATTCCCAGTTACGTGAAAAACCATGGCATTCTCAGTGGACGTGACCTGCAGTTTCTTCTCCGGGAAACCAAGCTGTTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | TTATGTAGCCAAGGAGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTGCTGTCTCCGCAATCTaGAAGCCCGATTCCTTGGTC | + |
Preference number: 5 (lower is better) Translates to: LCSQGECLVLLTLFLTCIAVSAI*KPDSLV Trigger: GACCAAGGAATCGGGCTTCAAGATTGCGGAGACAGC...AATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCTCCTTGGCTACATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | TTATGTAGCCAAGGAGAATGCTTGGTCCTCCTGACTCTGTTTCTTACCTGCATTGGGTCTTGTGGCCTTTaGACTGGGCATAGCTCGCAT | + |
Preference number: 5 (lower is better) Translates to: LCSQGECLVLLTLFLTCIGSCGL*TGHSSH Trigger: ATGCGAGCTATGCCCAGTCAAAAGGCCACAAGACCC...AATGCAGGTAAGAAACAGAGTCAGGAGGACCAAGCATTCTCCTTGGCTACATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | AGCATTCTACAAACTGAGCTACATCCCCCTGCTTATAGACATCTCTTTTCTCTGGGGTCTTGTGGCCTTTaGACTGGGCATAGCTCGCAT | + |
Preference number: 5 (lower is better) Translates to: SILQTELHPPAYRHLFSLGSCGL*TGHSSH Trigger: ATGCGAGCTATGCCCAGTCAAAAGGCCACAAGACCC...CAGAGAAAAGAGATGTCTATAAGCAGGGGGATGTAGCTCAGTTTGTAGAATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | AGCATTCTACAAACTGAGCTACATCCCCCTGCTTATAGACATCTCTTTTCTCTGTTGGGAGGGTTGAACTaGGGGTTCAGGAAAGCACAT | + |
Preference number: 5 (lower is better) Translates to: SILQTELHPPAYRHLFSLLGGLN*GFRKAH Trigger: ATGTGCTTTCCTGAACCCCAAGTTCAACCCTCCCAA...CAGAGAAAAGAGATGTCTATAAGCAGGGGGATGTAGCTCAGTTTGTAGAATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS-3UTR CAA 90 bp | TCAAAAGGTCCCTCAAAGAAACCCCTGGAATGTTCCAGAACATATTGGTGGTTCTTTTCAATGAAAGCGTaGATTCTCTGCAGCATGCCT | + |
Preference number: 5 (lower is better) Translates to: SKGPSKKPLECSRTYWWFFSMKA*ILCSMP Trigger: AGGCATGCTGCAGAGAATCAACGCTTTCATTGAAAA...GAACCACCAATATGTTCTGGAACATTCCAGGGGTTTCTTTGAGGGACCTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038361.11 |
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CDS-3UTR CAA 90 bp | TGTTTCTTACCTGCATTTATGTGGTGCTGGGGATGGAACCCAGGACTTCATTTATTTTCAATGAAAGCGTaGATTCTCTGCAGCATGCCT | + |
Preference number: 5 (lower is better) Translates to: CFLPAFMWCWGWNPGLHLFSMKA*ILCSMP Trigger: AGGCATGCTGCAGAGAATCAACGCTTTCATTGAAAA...TAAATGAAGTCCTGGGTTCCATCCCCAGCACCACATAAATGCAGGTAAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 90 bp | CACAATATCGATATAAATCAGCTCAACGATTCTGTCTCCTACAGTTaGACAGCCAGACCGGTTTCCAACAACCTTCTTCATTATCTCCTT | + |
Preference number: 5 (lower is better) Translates to: HNIDINQLNDSVSYS*TARPVSNNLLHYLL Trigger: AAGGAGATAATGAAGAAGGTTGTTGGAAACCGGTCTGGCTGTCCAACTGTAGGAGACAGAATCGTTGAGCTGATTTATATCGATATTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 90 bp | TACTGGAGCCATAAACAGTGGCGTGCACTTCCATGTACGTGTGAATaGTATCCAGGTAGATTTTCTTATTCTTCCAGAAACTATCCACTT | + |
Preference number: 5 (lower is better) Translates to: YWSHKQWRALPCTCE*YPGRFSYSSRNYPL Trigger: AAGTGGATAGTTTCTGGAAGAATAAGAAAATCTACCTGGATATCATTCACACGTACATGGAAGTGCACGCCACTGTTTATGGCTCCAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS GCA 72 bp | TGTTTGCAGGACTGCCCTGGCTCAGCCAGCTTCACCTaGAGGGCGCTGAGGGGCGGCCACATCACTTGGCCA | + |
Preference number: 6 (lower is better) Translates to: CLQDCPGSASFT*RALRGGHITWP Trigger: TGGCCAAGTGATGTGGCCGCCCCTCAGCGCCCTGCAGGTGAAGCTGGCTGAGCCAGGGCAGTCCTGCAAACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | AAGAAGGAAGGCTCGCAGATGAGCTGGCTCTCCTGGCACACCTGTTaGCAGGACTGCCCTGGCTCAGCCAGCTTCACCTGCAGGGCGCTG | + |
Preference number: 6 (lower is better) Translates to: KKEGSQMSWLSWHTC*QDCPGSASFTCRAL Trigger: CAGCGCCCTGCAGGTGAAGCTGGCTGAGCCAGGGCAGTCCTGCAAACAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCTTCCTTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | AGATCCGCTGGTGTGTGGGGTGGGCTCCGGCACAACTaGAGAGCAGGAGGTCCCCTTGGAACACACAGTGCT | + |
Preference number: 6 (lower is better) Translates to: RSAGVWGGLRHN*RAGGPLGTHSA Trigger: AGCACTGTGTGTTCCAAGGGGACCTCCTGCTCTTCAGTTGTGCCGGAGCCCACCCCACACACCAGCGGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | CTGGGGACAGCCGTGGTGGAGTTGGTGGAGTTCGCTCCTGTGCCGTaGACCAGATTGTCCACCTTTGACTCGAGCTTGCCAATGCGCTGC | + |
Preference number: 6 (lower is better) Translates to: LGTAVVELVEFAPVP*TRLSTFDSSLPMRC Trigger: GCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAACTCCACCAACTCCACCACGGCTGTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | AGGATCTGCTCCCGTAACATGGAGCTGCTCTCGGGCTaGGTCCGCTGCTGGATGGTGAAGTGCAGAAGCATC | + |
Preference number: 6 (lower is better) Translates to: RICSRNMELLSG*VRCWMVKCRSI Trigger: GATGCTTCTGCACTTCACCATCCAGCAGCGGACTCAGCCCGAGAGCAGCTCCATGTTACGGGAGCAGATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | GCCGTGGTGGAGTTGGTGGAGTTCGCTCCTGTGCCGTaGACCAGATTGTCCACCTTTGACTCGAGCTTGCCA | + |
Preference number: 6 (lower is better) Translates to: AVVELVEFAPVP*TRLSTFDSSLP Trigger: TGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAACTCCACCAACTCCACCACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | GTGGGCTCCGGCACAACTGAAGAGCAGGAGGTCCCCTaGGAACACACAGTGCTTGCTCTTGGGGTAGAAGGA | + |
Preference number: 6 (lower is better) Translates to: VGSGTTEEQEVP*EHTVLALGVEG Trigger: TCCTTCTACCCCAAGAGCAAGCACTGTGTGTTCCAAGGGGACCTCCTGCTCTTCAGTTGTGCCGGAGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | GCCGTGGTGGAGTTGGTGGAGTTCGCTCCTGTGCCGTTGACCAGATaGTCCACCTTTGACTCGAGCTTGCCAATGCGCTGCAGGATGTTA | + |
Preference number: 6 (lower is better) Translates to: AVVELVEFAPVPLTR*STFDSSLPMRCRML Trigger: TAACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAACTCCACCAACTCCACCACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | AGACGGCGAGCGTTTTCTTCAGATCATAGGCTGTCATaGCACCAGCGTAGGGGCCATCCACCACGTCCCTGT | + |
Preference number: 6 (lower is better) Translates to: RRRAFSSDHRLS*HQRRGHPPRPC Trigger: ACAGGGACGTGGTGGATGGCCCCTACGCTGGTGTCATGACAGCCTATGATCTGAAGAAAACGCTCGCCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | CCGTGGTGGAGTTGGTGGAGTTCGCTCCTGTGCCGTTaGCCAGATTGTCCACCTTTGACTCGAGCTTGCCAA | + |
Preference number: 6 (lower is better) Translates to: PWWSWWSSLLCR*PDCPPLTRACQ Trigger: TTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAACTCCACCAACTCCACCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS GCA 72 bp | CCACTGAACGAGTTCACCCAGAGGGCCACCGCTGAATaGTGTCTCCGCAATCTTGAAGCCCGATTCCTTGGT | + |
Preference number: 6 (lower is better) Translates to: PLNEFTQRATAE*CLRNLEARFLG Trigger: ACCAAGGAATCGGGCTTCAAGATTGCGGAGACAGCATTCAGCGGTGGCCCTCTGGGTGAACTCGTTCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | TTCACCTGCAGGGCGCTGAGGGGCGGCCACATCACTTaGCCATGGCAGAAGTCCTGTTTTTCAATGAAAGCG | + |
Preference number: 6 (lower is better) Translates to: FTCRALRGGHIT*PWQKSCFSMKA Trigger: CGCTTTCATTGAAAAACAGGACTTCTGCCATGGCCAAGTGATGTGGCCGCCCCTCAGCGCCCTGCAGGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | GAGTTGGTGGAGTTCGCTCCTGTGCCGTTGACCAGATaGTCCACCTTTGACTCGAGCTTGCCAATGCGCTGC | + |
Preference number: 6 (lower is better) Translates to: ELVEFAPVPLTR*STFDSSLPMRC Trigger: GCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAACTCCACCAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | CTTCACCTGCAGGGCGCTGAGGGGCGGCCACATCACTaGGCCATGGCAGAAGTCCTGTTTTTCAATGAAAGC | + |
Preference number: 6 (lower is better) Translates to: LHLQGAEGRPHH*AMAEVLFFNES Trigger: GCTTTCATTGAAAAACAGGACTTCTGCCATGGCCAAGTGATGTGGCCGCCCCTCAGCGCCCTGCAGGTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | TCCACCACGTCCCTGTTCTCCTCTGCCAGTGCCTTAATGTACCTCTaGCTGAGGTCAAGGATCTGCTCCCGTAACATGGAGCTGCTCTCG | + |
Preference number: 6 (lower is better) Translates to: STTSLFSSASALMYL*LRSRICSRNMELLS Trigger: CGAGAGCAGCTCCATGTTACGGGAGCAGATCCTTGACCTCAGCAAGAGGTACATTAAGGCACTGGCAGAGGAGAACAGGGACGTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | TTCGCTCCTGTGCCGTTGACCAGATTGTCCACCTTTGACTCGAGCTaGCCAATGCGCTGCAGGATGTTATCCAGCAAGACGGCGAGCGTT | + |
Preference number: 6 (lower is better) Translates to: FAPVPLTRLSTFDSS*PMRCRMLSSKTASV Trigger: AACGCTCGCCGTCTTGCTGGATAACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | GGCCTTCATAAGGGAATCCGAGCCCAACGAACAGCTTaGTTTCCCGGAGAAGAAACTGCAGGTCACGTCCAC | + |
Preference number: 6 (lower is better) Translates to: GLHKGIRAQRTA*FPGEETAGHVH Trigger: GTGGACGTGACCTGCAGTTTCTTCTCCGGGAAACCAAGCTGTTCGTTGGGCTCGGATTCCCTTATGAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | GTTCGCTCCTGTGCCGTTGACCAGATTGTCCACCTTTaGCTCGAGCTTGCCAATGCGCTGCAGGATGTTATC | + |
Preference number: 6 (lower is better) Translates to: VRSCAVDQIVHL*LELANALQDVI Trigger: GATAACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | CCCAGCAGGTACAGAGATGTGATTAAGTCACTCCACTaGACGAGTTCACCCAGAGGGCCACCGCTGAATGCT | + |
Preference number: 6 (lower is better) Translates to: PSRYRDVIKSLH*TSSPRGPPLNA Trigger: AGCATTCAGCGGTGGCCCTCTGGGTGAACTCGTTCAGTGGAGTGACTTAATCACATCTCTGTACCTGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | TCAAGGTTTTGTTTCTCCGCCAGAGACTTGATAGCTTaGATCCACGCGTCAGCCATTCGCCGGATCCGAAGC | + |
Preference number: 6 (lower is better) Translates to: SRFCFSARDLIA*IHASAIRRIRS Trigger: GCTTCGGATCCGGCGAATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAAACAAAACCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | TTGAGCTCAGCCAGTGAGGCCGAGATCCGGATGTCATaGCCCAGCAGGTACAGAGATGTGATTAAGTCACTC | + |
Preference number: 6 (lower is better) Translates to: LSSASEAEIRMS*PSRYRDVIKSL Trigger: GAGTGACTTAATCACATCTCTGTACCTGCTGGGCCATGACATCCGGATCTCGGCCTCACTGGCTGAGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | TTCCTCTCGGTTATTGAGATCCACAGTCCAGACGTGTaGCCGGCCGATGAAGACTTCTGCGTAAGGATGCTG | + |
Preference number: 6 (lower is better) Translates to: FLSVIEIHSPDV*PADEDFCVRML Trigger: CAGCATCCTTACGCAGAAGTCTTCATCGGCCGGCCACACGTCTGGACTGTGGATCTCAATAACCGAGAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | GTGCCGTTGACCAGATTGTCCACCTTTGACTCGAGCTaGCCAATGCGCTGCAGGATGTTATCCAGCAAGACG | + |
Preference number: 6 (lower is better) Translates to: VPLTRLSTFDSS*PMRCRMLSSKT Trigger: CGTCTTGCTGGATAACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCTGGTCAACGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | CTCAAGGTTTTGTTTCTCCGCCAGAGACTTGATAGCTaGGATCCACGCGTCAGCCATTCGCCGGATCCGAAG | + |
Preference number: 6 (lower is better) Translates to: LKVLFLRQRLDS*DPRVSHSPDPK Trigger: CTTCGGATCCGGCGAATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAAACAAAACCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | TTAATTTTCTCAAGCGACACCAAGCTGGGGACAGCCGTGGTGGAGTaGGTGGAGTTCGCTCCTGTGCCGTTGACCAGATTGTCCACCTTT | + |
Preference number: 6 (lower is better) Translates to: LIFSSDTKLGTAVVE*VEFAPVPLTRLSTF Trigger: AAAGGTGGACAATCTGGTCAACGGCACAGGAGCGAACTCCACCAACTCCACCACGGCTGTCCCCAGCTTGGTGTCGCTTGAGAAAATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | AACAACCTTCTTCATTATCTCCTTGAGCTCAGCCAGTaGGGCCGAGATCCGGATGTCATGGCCCAGCAGGTA | + |
Preference number: 6 (lower is better) Translates to: NNLLHYLLELSQ*GRDPDVMAQQV Trigger: TACCTGCTGGGCCATGACATCCGGATCTCGGCCTCACTGGCTGAGCTCAAGGAGATAATGAAGAAGGTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS GCA 72 bp | AGATTGTCCACCTTTGACTCGAGCTTGCCAATGCGCTaGAGGATGTTATCCAGCAAGACGGCGAGCGTTTTC | + |
Preference number: 6 (lower is better) Translates to: RLSTFDSSLPMR*RMLSSKTASVF Trigger: GAAAACGCTCGCCGTCTTGCTGGATAACATCCTGCAGCGCATTGGCAAGCTCGAGTCAAAGGTGGACAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS GCA 72 bp | CAGGTTCTGTTCCAAAGGAGTCTAGCACCCGGAGCATaGACTGGTAATGAACCCAGGATGGCCCTAGTGTTT | + |
Preference number: 6 (lower is better) Translates to: QVLFQRSLAPGA*TGNEPRMALVF Trigger: AAACACTAGGGCCATCCTGGGTTCATTACCAGTGCATGCTCCGGGTGCTAGACTCCTTTGGAACAGAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | TCCCTGTTCTCCTCTGCCAGTGCCTTAATGTACCTCTaGCTGAGGTCAAGGATCTGCTCCCGTAACATGGAG | + |
Preference number: 6 (lower is better) Translates to: SLFSSASALMYL*LRSRICSRNME Trigger: CTCCATGTTACGGGAGCAGATCCTTGACCTCAGCAAGAGGTACATTAAGGCACTGGCAGAGGAGAACAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | TTCCTCTTCTCAAGGTTTTGTTTCTCCGCCAGAGACTaGATAGCTTGGATCCACGCGTCAGCCATTCGCCGG | + |
Preference number: 6 (lower is better) Translates to: FLFSRFCFSARD*IAWIHASAIRR Trigger: CCGGCGAATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAAACAAAACCTTGAGAAGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | TTTCCTCTTCTCAAGGTTTTGTTTCTCCGCCAGAGACTTGATAGCTaGGATCCACGCGTCAGCCATTCGCCGGATCCGAAGCCTCATCCA | + |
Preference number: 6 (lower is better) Translates to: FPLLKVLFLRQRLDS*DPRVSHSPDPKPHP Trigger: TGGATGAGGCTTCGGATCCGGCGAATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAAACAAAACCTTGAGAAGAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | TTCTTCCGTTTCCTCTTCTCAAGGTTTTGTTTCTCCGCCAGAGACTaGATAGCTTGGATCCACGCGTCAGCCATTCGCCGGATCCGAAGC | + |
Preference number: 6 (lower is better) Translates to: FFRFLFSRFCFSARD*IAWIHASAIRRIRS Trigger: GCTTCGGATCCGGCGAATGGCTGACGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAAACAAAACCTTGAGAAGAGGAAACGGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS GCA 72 bp | AGCCCAACGAACAGCTTGGTTTCCCGGAGAAGAAACTaGAGGTCACGTCCACTGAGAATGCCATGGTTTTTC | + |
Preference number: 6 (lower is better) Translates to: SPTNSLVSRRRN*RSRPLRMPWFF Trigger: GAAAAACCATGGCATTCTCAGTGGACGTGACCTGCAGTTTCTTCTCCGGGAAACCAAGCTGTTCGTTGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | GAGGGCACCAGGATGTCCTTGTACAGTTCTGAGCTTTaGCAGGTCACCTTATACTTCAGCAGGTCCTTTTCC | + |
Preference number: 6 (lower is better) Translates to: EGTRMSLYSSEL*QVTLYFSRSFS Trigger: GGAAAAGGACCTGCTGAAGTATAAGGTGACCTGCCAAAGCTCAGAACTGTACAAGGACATCCTGGTGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | ATGGCTTTTACTGCATCTTCTACTTCCTCTCGGTTATaGAGATCCACAGTCCAGACGTGTGGCCGGCCGATG | + |
Preference number: 6 (lower is better) Translates to: MAFTASSTSSRL*RSTVQTCGRPM Trigger: CATCGGCCGGCCACACGTCTGGACTGTGGATCTCAATAACCGAGAGGAAGTAGAAGATGCAGTAAAAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | CCCCAGGTGAACAAGGATTTTCTTCCGTTTCCTCTTCTCAAGGTTTaGTTTCTCCGCCAGAGACTTGATAGCTTGGATCCACGCGTCAGC | + |
Preference number: 6 (lower is better) Translates to: PQVNKDFLPFPLLKV*FLRQRLDSLDPRVS Trigger: GCTGACGCGTGGATCCAAGCTATCAAGTCTCTGGCGGAGAAACAAAACCTTGAGAAGAGGAAACGGAAGAAAATCCTTGTTCACCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | TCTTGTGGCCTTTTGACTGGGCATAGCTCGCATGATTaGACTCAGGTTCTGTTCCAAAGGAGTCTAGCACCC | + |
Preference number: 6 (lower is better) Translates to: SCGLLTGHSSHD*TQVLFQRSLAP Trigger: GGGTGCTAGACTCCTTTGGAACAGAACCTGAGTTCAATCATGCGAGCTATGCCCAGTCAAAAGGCCACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | TGGTTTAAGATGGCTTTTACTGCATCTTCTACTTCCTCTCGGTTATaGAGATCCACAGTCCAGACGTGTGGCCGGCCGATGAAGACTTCT | + |
Preference number: 6 (lower is better) Translates to: WFKMAFTASSTSSRL*RSTVQTCGRPMKTS Trigger: AGAAGTCTTCATCGGCCGGCCACACGTCTGGACTGTGGATCTCAATAACCGAGAGGAAGTAGAAGATGCAGTAAAAGCCATCTTAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | CATGGTTTTTCACGTAACTGGGAATGTTCTTGGTACTaGAGCCATAAACAGTGGCGTGCACTTCCATGTACG | + |
Preference number: 6 (lower is better) Translates to: HGFSRNWECSWY*SHKQWRALPCT Trigger: CGTACATGGAAGTGCACGCCACTGTTTATGGCTCCAGTACCAAGAACATTCCCAGTTACGTGAAAAACCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | GAATGCCATGGTTTTTCACGTAACTGGGAATGTTCTTaGTACTGGAGCCATAAACAGTGGCGTGCACTTCCA | + |
Preference number: 6 (lower is better) Translates to: ECHGFSRNWECS*YWSHKQWRALP Trigger: TGGAAGTGCACGCCACTGTTTATGGCTCCAGTACCAAGAACATTCCCAGTTACGTGAAAAACCATGGCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 72 bp | CGATATAAATCAGCTCAACGATTCTGTCTCCTACAGTaGGACAGCCAGACCGGTTTCCAACAACCTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: RYKSAQRFCLLQ*DSQTGFQQPSS Trigger: TGAAGAAGGTTGTTGGAAACCGGTCTGGCTGTCCAACTGTAGGAGACAGAATCGTTGAGCTGATTTATATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | GATATAAATCAGCTCAACGATTCTGTCTCCTACAGTTaGACAGCCAGACCGGTTTCCAACAACCTTCTTCAT | + |
Preference number: 6 (lower is better) Translates to: DINQLNDSVSYS*TARPVSNNLLH Trigger: ATGAAGAAGGTTGTTGGAAACCGGTCTGGCTGTCCAACTGTAGGAGACAGAATCGTTGAGCTGATTTATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CAA 90 bp | CCACAATATCGATATAAATCAGCTCAACGATTCTGTCTCCTACAGTaGGACAGCCAGACCGGTTTCCAACAACCTTCTTCATTATCTCCT | + |
Preference number: 6 (lower is better) Translates to: PQYRYKSAQRFCLLQ*DSQTGFQQPSSLSP Trigger: AGGAGATAATGAAGAAGGTTGTTGGAAACCGGTCTGGCTGTCCAACTGTAGGAGACAGAATCGTTGAGCTGATTTATATCGATATTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS TCA 72 bp | CATAAACAGTGGCGTGCACTTCCATGTACGTGTGAATaGTATCCAGGTAGATTTTCTTATTCTTCCAGAAAC | + |
Preference number: 6 (lower is better) Translates to: HKQWRALPCTCE*YPGRFSYSSRN Trigger: GTTTCTGGAAGAATAAGAAAATCTACCTGGATATCATTCACACGTACATGGAAGTGCACGCCACTGTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |
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CDS CCA 72 bp | CATGTGAACTCATATGGCATATACGGCTCAATCTTCTaGTTTAAGATGGCTTTTACTGCATCTTCTACTTCC | + |
Preference number: 6 (lower is better) Translates to: HVNSYGIYGSIF*FKMAFTASSTS Trigger: GGAAGTAGAAGATGCAGTAAAAGCCATCTTAAACCAGAAGATTGAGCCGTATATGCCATATGAGTTCACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038361.11 ENSMUST00000171405.2 |