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Pregenerated sensors for MGAT4F (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050526

Ensembl transcript IDs: ENSMUST00000162187.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGCGGGAAAGGTCCTCAGTATGGAAAACCTTTCCGGAGAGCGGCATaGTGGAGAAGTCTAGGCTCACCCAAGGGAGCTGTTTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: SGKGPQYGKPFRRAA*WRSLGSPKGAVSRP
Trigger: CGGCCTGGAAACAGCTCCCTTGGGTGAGCCTAGACTTCTCCAGCATGCCGCTCTCCGGAAAGGTTTTCCATACTGAGGACCTTTCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CCA 90 bp GGGAAAGGTCCTCAGTATGGAAAACCTTTCCGGAGAGCGGCATGCTaGAGAAGTCTAGGCTCACCCAAGGGAGCTGTTTCCAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: GKGPQYGKPFRRAAC*RSLGSPKGAVSRPA
Trigger: TGCCGGCCTGGAAACAGCTCCCTTGGGTGAGCCTAGACTTCTCCAGCATGCCGCTCTCCGGAAAGGTTTTCCATACTGAGGACCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS GCA 90 bp TGGTGTCCAAGAGGTGAGTCCTGTGGCTATGTGGCACTGAGAAGATaGCCACCGTCAGCATCCTCTTTGGCTGGTAAGAGGCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: WCPRGESCGYVALRR*PPSASSLAGKRLQP
Trigger: TGGCTGGAGCCTCTTACCAGCCAAAGAGGATGCTGACGGTGGGCATCTTCTCAGTGCCACATAGCCACAGGACTCACCTCTTGGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS TCA 90 bp GGATGTCATGGTGTCCAAGAGGTGAGTCCTGTGGCTATGTGGCACTaGGAAGATGCCCACCGTCAGCATCCTCTTTGGCTGGTAAGAGGC +
Preference number: 5 (lower is better)
Translates to: GCHGVQEVSPVAMWH*EDAHRQHPLWLVRG
Trigger: GCCTCTTACCAGCCAAAGAGGATGCTGACGGTGGGCATCTTCTCAGTGCCACATAGCCACAGGACTCACCTCTTGGACACCATGACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS TCA 90 bp TGTTCCGAGGAAGCTTGGAACAAGGATGTCATGGTGTCCAAGAGGTaGGTCCTGTGGCTATGTGGCACTGAGAAGATGCCCACCGTCAGC +
Preference number: 5 (lower is better)
Translates to: CSEEAWNKDVMVSKR*VLWLCGTEKMPTVS
Trigger: GCTGACGGTGGGCATCTTCTCAGTGCCACATAGCCACAGGACTCACCTCTTGGACACCATGACATCCTTGTTCCAAGCTTCCTCGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CCA 90 bp GGGAAGAGGAGCAAGAAGGAAACGAAGCGGGAAAGGTCCTCAGTATaGAAAACCTTTCCGGAGAGCGGCATGCTGGAGAAGTCTAGGCTC +
Preference number: 5 (lower is better)
Translates to: GKRSKKETKRERSSV*KTFPESGMLEKSRL
Trigger: GAGCCTAGACTTCTCCAGCATGCCGCTCTCCGGAAAGGTTTTCCATACTGAGGACCTTTCCCGCTTCGTTTCCTTCTTGCTCCTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS TCA 90 bp GACCACCAGCAGCCTCCCAGAGTCAATGTGAGGCATGAAAAGACCTaGAATGTTGGCAACTGTTTGGTTGAGCCATGTGGGGTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: DHQQPPRVNVRHEKT*NVGNCLVEPCGVSV
Trigger: GACACTGACCCCACATGGCTCAACCAAACAGTTGCCAACATTTCAGGTCTTTTCATGCCTCACATTGACTCTGGGAGGCTGCTGGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CCA 90 bp ATGGTCCTACCAAGTTATAATGAGCACAGCGTTGGGGGTATTCCATaGGGCTGTAGCCCAGTAATAGTTGCCCATGTTTTAATAAGTTCA +
Preference number: 5 (lower is better)
Translates to: MVLPSYNEHSVGGIP*GCSPVIVAHVLISS
Trigger: TGAACTTATTAAAACATGGGCAACTATTACTGGGCTACAGCCCCATGGAATACCCCCAACGCTGTGCTCATTATAACTTGGTAGGACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS TCA 90 bp TGTCCAGACTTTGATCTGCATGATCCTGACGGGGTAGTCATGAGATaGTGTCACCAGCAATTTTATACAACTAATCTCCATCACAGCATC +
Preference number: 5 (lower is better)
Translates to: CPDFDLHDPDGVVMR*CHQQFYTTNLHHSI
Trigger: GATGCTGTGATGGAGATTAGTTGTATAAAATTGCTGGTGACATCATCTCATGACTACCCCGTCAGGATCATGCAGATCAAAGTCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CCA 90 bp ATCTTCTTCATAAAATACCATCTGCTCCAACTGACCTCTCACCAATaGTCCTACCAAGTTATAATGAGCACAGCGTTGGGGGTATTCCAT +
Preference number: 5 (lower is better)
Translates to: IFFIKYHLLQLTSHQ*SYQVIMSTALGVFH
Trigger: ATGGAATACCCCCAACGCTGTGCTCATTATAACTTGGTAGGACCATTGGTGAGAGGTCAGTTGGAGCAGATGGTATTTTATGAAGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS GCA 72 bp AGAGGTGAGTCCTGTGGCTATGTGGCACTGAGAAGATaGCCACCGTCAGCATCCTCTTTGGCTGGTAAGAGG +
Preference number: 6 (lower is better)
Translates to: RGESCGYVALRR*PPSASSLAGKR
Trigger: CCTCTTACCAGCCAAAGAGGATGCTGACGGTGGGCATCTTCTCAGTGCCACATAGCCACAGGACTCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS TCA 72 bp GGCAACTGTTTGGTTGAGCCATGTGGGGTCAGTGTCTaGCAGGAGGACCAAGACCAGCATATACTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: GNCLVEPCGVSV*QEDQDQHILQV
Trigger: GACCTGGAGTATATGCTGGTCTTGGTCCTCCTGTCAGACACTGACCCCACATGGCTCAACCAAACAGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CAA 72 bp CAGGCCGGCAAGGCCCAGAAGACATTAGCCAGAAACTaGGGGGCAGTCTTCACATTATCTCCTAGCAACAGG +
Preference number: 6 (lower is better)
Translates to: QAGKAQKTLARN*GAVFTLSPSNR
Trigger: CCTGTTGCTAGGAGATAATGTGAAGACTGCCCCCAAGTTTCTGGCTAATGTCTTCTGGGCCTTGCCGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CAA 90 bp GAGGACCAAGACCAGCATATACTCCAGGTCCTGTTCCGAGGAAGCTaGGAACAAGGATGTCATGGTGTCCAAGAGGTGAGTCCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: EDQDQHILQVLFRGS*EQGCHGVQEVSPVA
Trigger: AGCCACAGGACTCACCTCTTGGACACCATGACATCCTTGTTCCAAGCTTCCTCGGAACAGGACCTGGAGTATATGCTGGTCTTGGTCCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS TCA 72 bp GAAGCTTGGAACAAGGATGTCATGGTGTCCAAGAGGTaGGTCCTGTGGCTATGTGGCACTGAGAAGATGCCC +
Preference number: 6 (lower is better)
Translates to: EAWNKDVMVSKR*VLWLCGTEKMP
Trigger: GGGCATCTTCTCAGTGCCACATAGCCACAGGACTCACCTCTTGGACACCATGACATCCTTGTTCCAAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CCA 72 bp AGCAAGAAGGAAACGAAGCGGGAAAGGTCCTCAGTATaGAAAACCTTTCCGGAGAGCGGCATGCTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SKKETKRERSSV*KTFPESGMLEK
Trigger: CTTCTCCAGCATGCCGCTCTCCGGAAAGGTTTTCCATACTGAGGACCTTTCCCGCTTCGTTTCCTTCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CAA 90 bp TCTGTAAAGACAGTCCCAGCAGGATTGTCTGGTCTGCCCAAGTCTTaGTCTCGCTTCGCAGGAAAGCATGTGTCTTCAAACTCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: SVKTVPAGLSGLPKS*SRFAGKHVSSNSES
Trigger: GGACTCTGAGTTTGAAGACACATGCTTTCCTGCGAAGCGAGACAAAGACTTGGGCAGACCAGACAATCCTGCTGGGACTGTCTTTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CAA 72 bp AACGAGATCATGTCTGTAAAGACAGTCCCAGCAGGATaGTCTGGTCTGCCCAAGTCTTTGTCTCGCTTCGCA +
Preference number: 6 (lower is better)
Translates to: NEIMSVKTVPAG*SGLPKSLSRFA
Trigger: TGCGAAGCGAGACAAAGACTTGGGCAGACCAGACAATCCTGCTGGGACTGTCTTTACAGACATGATCTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS TCA 72 bp TGTTGCTGCTTTACATGTGCTGCTGCGATATTGTCTTaGAGAAAGAACCCCAGGATGACTAGGGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: CCCFTCAAAILS*RKNPRMTRDAR
Trigger: CCTGGCATCCCTAGTCATCCTGGGGTTCTTTCTTCAAGACAATATCGCAGCAGCACATGTAAAGCAGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CAA 90 bp GTATTCCAAAACGAGATCATGTCTGTAAAGACAGTCCCAGCAGGATaGTCTGGTCTGCCCAAGTCTTTGTCTCGCTTCGCAGGAAAGCAT +
Preference number: 6 (lower is better)
Translates to: VFQNEIMSVKTVPAG*SGLPKSLSRFAGKH
Trigger: ATGCTTTCCTGCGAAGCGAGACAAAGACTTGGGCAGACCAGACAATCCTGCTGGGACTGTCTTTACAGACATGATCTCGTTTTGGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CCA 72 bp CCAAGTTATAATGAGCACAGCGTTGGGGGTATTCCATaGGGCTGTAGCCCAGTAATAGTTGCCCATGTTTTA +
Preference number: 6 (lower is better)
Translates to: PSYNEHSVGGIP*GCSPVIVAHVL
Trigger: TAAAACATGGGCAACTATTACTGGGCTACAGCCCCATGGAATACCCCCAACGCTGTGCTCATTATAACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS GCA 72 bp ACTCAGCAATGTGTTATGTTGCTGCTTTACATGTGCTaGTGCGATATTGTCTTGAAGAAAGAACCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: TQQCVMLLLYMC*CDIVLKKEPQD
Trigger: ATCCTGGGGTTCTTTCTTCAAGACAATATCGCAGCAGCACATGTAAAGCAGCAACATAACACATTGCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CAA 72 bp AATCATTTTCTTCTTTTCACTCAGCAATGTGTTATGTaGCTGCTTTACATGTGCTGCTGCGATATTGTCTTG +
Preference number: 6 (lower is better)
Translates to: NHFLLFTQQCVM*LLYMCCCDIVL
Trigger: CAAGACAATATCGCAGCAGCACATGTAAAGCAGCAACATAACACATTGCTGAGTGAAAAGAAGAAAATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2
CDS CAA 90 bp TATCTGCTGAATCATTTTCTTCTTTTCACTCAGCAATGTGTTATGTaGCTGCTTTACATGTGCTGCTGCGATATTGTCTTGAAGAAAGAA +
Preference number: 6 (lower is better)
Translates to: YLLNHFLLFTQQCVM*LLYMCCCDIVLKKE
Trigger: TTCTTTCTTCAAGACAATATCGCAGCAGCACATGTAAAGCAGCAACATAACACATTGCTGAGTGAAAAGAAGAAAATGATTCAGCAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162187.2