Pregenerated sensors for MGAT4C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019888Ensembl transcript IDs: ENSMUST00000020039.13, ENSMUST00000120748.2, ENSMUST00000138522.8, ENSMUST00000156751.8, ENSMUST00000163753.8, ENSMUST00000179929.8, ENSMUST00000219195.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATACCAGATGGGACTGGAGTGATGGCTCAGTGGTTAAGAGTGCCTaGGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGT | + |
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Preference number: 1 (lower is better) Translates to: HTRWDWSDGSVVKSA*GSCKEHCFVSQHPC Trigger: ACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCTTAACCACTGAGCCATCACTCCAGTCCCATCTGGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR GCA 90 bp | TGGGACTGGAGTGATGGCTCAGTGGTTAAGAGTGCCTGCGGCTCTTaGAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCATATATCT | + |
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Preference number: 1 (lower is better) Translates to: WDWSDGSVVKSACGS*KEHCFVSQHPCHIS Trigger: AGATATATGACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCTTAACCACTGAGCCATCACTCCAGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR TCA 90 bp | CCAATAATGTTTGATTACTATTTGTACGCATATAGCACACAAGCATaGATTAAAACACTTTACAGTCATCATACAGCATGGGAACGTGCT | + |
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Preference number: 1 (lower is better) Translates to: PIMFDYYLYAYSTQA*IKTLYSHHTAWERA Trigger: AGCACGTTCCCATGCTGTATGATGACTGTAAAGTGTTTTAATTCATGCTTGTGTGCTATATGCGTACAAATAGTAATCAAACATTATTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGACAAGAAGTTAGCAAAAACTaGAACAGGAAGACCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: KTLFWLLQAPHTGGIHRQEVSKN*NRKTCF Trigger: GAAGCAGGTCTTCCTGTTTCAGTTTTTGCTAACTTC...TTGTCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCGATTCATTTTTCTTGTaGCATGGCACAGCAATTGGT | + |
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Preference number: 2 (lower is better) Translates to: RVPAALAKNTVLFPSTHVDSFFL*HGTAIG Trigger: ACCAATTGCTGTGCCATGTCACAAGAAAAATGAATC...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR CAA 90 bp | GCTCAGTGGTTAAGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTaGTTTCCCAGCACCCATGTCATATATCTCATAATGTCCTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: AQWLRVPAALAKNTV*FPSTHVIYLIMSCN Trigger: GTTACAGGACATTATGAGATATATGACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCTTAACCACTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCGAAGTTAGCAAAAACTaGAACAGGAAGACCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TAEMIHFSCDMAQQLVALEVSKN*NRKTCF Trigger: GAAGCAGGTCTTCCTGTTTCAGTTTTTGCTAACTTC...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGACCACTGAGTACATTCTGAAACACAAGTGGATTGAGAAAACACTCTGGAGTGCCTGCGGCTCTTaGAAAGAACACTGTTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: DVTTEYILKHKWIEKTLWSACGS*KEHCFV Trigger: AACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACT...CCAGAGTGTTTTCTCAATCCACTTGTGTTTCAGAATGTACTCAGTGGTCACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTGATTCATTTTTCTTGTaGCATGGCACAGCAATTGGT | + |
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Preference number: 2 (lower is better) Translates to: NGLTVSHLSFSINYRRNLDSFFL*HGTAIG Trigger: ACCAATTGCTGTGCCATGTCACAAGAAAAATGAATC...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATTCAAAACTGCCGAGATaGTTCATTTTTCTTGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYSKLPR*FIFLVT Trigger: TGTCACAAGAAAAATGAATCATCTCGGCAGTTTTGA...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR CCA 72 bp | AGAGGCATACCAGATGGGACTGGAGTGATGGCTCAGTaGTTAAGAGTGCCTGCGGCTCTTGCAAAGAACACT | + |
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Preference number: 3 (lower is better) Translates to: RGIPDGTGVMAQ*LRVPAALAKNT Trigger: AGTGTTCTTTGCAAGAGCCGCAGGCACTCTTAACCACTGAGCCATCACTCCAGTCCCATCTGGTATGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR-3UTR CAA 90 bp | AAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGACAAGACATGGCACAGCAATaGGTTGCCCTCCAAAAGACT | + |
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Preference number: 3 (lower is better) Translates to: KTLFWLLQAPHTGGIHRQDMAQQ*VALQKT Trigger: AGTCTTTTGGAGGGCAACCAATTGCTGTGCCATGTC...TTGTCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR CCA 72 bp | TGTAACTTGAGTTTCAGGGTATCTAAAACCCTCTTCTaGCTTCTGCAGGCACCACACACAGGTGGTATACAC | + |
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Preference number: 3 (lower is better) Translates to: CNLSFRVSKTLF*LLQAPHTGGIH Trigger: GTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGATACCCTGAAACTCAAGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCCACATAAGACAGCCATTTAATCTCCCCCAATATGATAAATTACAACAAGACATGGCACAGCAATaGGTTGCCCTCCAAAAGACT | + |
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Preference number: 3 (lower is better) Translates to: FSHIRQPFNLPQYDKLQQDMAQQ*VALQKT Trigger: AGTCTTTTGGAGGGCAACCAATTGCTGTGCCATGTC...TTGTTGTAATTTATCATATTGGGGGAGATTAAATGGCTGTCTTATGTGGGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | TCTAAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGAAGCAGCCCTCGGAAATaGGTCAATAGCCAATCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SKTLFWLLQAPHTGGIHRSSPRK*VNSQSQ Trigger: CTGCGATTGGCTATTGACTCATTTCCGAGGGCTGCT...TCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCCGAATCACATTTTTCTaGGCCAGCAGCCCTCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RVPAALAKNTVLFPSTHVRITFF*ASSPRK Trigger: TTTCCGAGGGCTGCTGGCTCAGAAAAATGTGATTCG...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | TCTAAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGAGGTGTAGAAACTCGCTaGGGGGTTATCAGGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: SKTLFWLLQAPHTGGIHRGVETR*GVIRDV Trigger: GACATCCCTGATAACCCCCCAGCGAGTTTCTACACC...TCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCGCTTGGAGCGAAATCTaGCTCTATCTTCTGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RVPAALAKNTVLFPSTHVAWSEI*LYLLGH Trigger: ATGACCCAGAAGATAGAGTCAGATTTCGCTCCAAGC...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCGAAATGGGCCAGACGTaGGAGATCGTGAGAATGATA | + |
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Preference number: 4 (lower is better) Translates to: RVPAALAKNTVLFPSTHVEMGQT*EIVRMI Trigger: TATCATTCTCACGATCTCCCACGTCTGGCCCATTTC...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCAGCAGCCCTCGGAAATaGGTCAATAGCCAATCGCAG | + |
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Preference number: 4 (lower is better) Translates to: TAEMIHFSCDMAQQLVALSSPRK*VNSQSQ Trigger: CTGCGATTGGCTATTGACTCATTTCCGAGGGCTGCT...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCTTCTGTGTAATGTCTTaGACCATGGCATCTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RVPAALAKNTVLFPSTHVFCVMS*TMASRH Trigger: ATGGCGAGATGCCATGGTCCAAGACATTACACAGAA...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCCGAATCACATTTTTCTaGGCCAGCAGCCCTCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TAEMIHFSCDMAQQLVALRITFF*ASSPRK Trigger: TTTCCGAGGGCTGCTGGCTCAGAAAAATGTGATTCG...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCAACATTAATAAGAAATaGGCCAGACGTGGGAGATCG | + |
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Preference number: 4 (lower is better) Translates to: RVPAALAKNTVLFPSTHVNINKK*ARRGRS Trigger: CGATCTCCCACGTCTGGCCCATTTCTTATTAATGTT...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | TCTAAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGACAAAGACATTCATGTTaGTGTAGAAACTCGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SKTLFWLLQAPHTGGIHRQRHSC*CRNSLG Trigger: CCCCAGCGAGTTTCTACACCAACATGAATGTCTTTG...TCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR GCA 90 bp | TCTAAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGAGTTTCCCTTATAAGTTaGTTGTCGCCTTCCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: SKTLFWLLQAPHTGGIHRVSLIS*LSPSRT Trigger: TGTTCTGGAAGGCGACAAGCAACTTATAAGGGAAAC...TCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCCGTTCAGAATTAAGTTaGTGTGTCGATGTTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: RVPAALAKNTVLFPSTHVRSELS*CVDVSL Trigger: AAGGGAAACATCGACACACCAACTTAATTCTGAACG...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCGAAATGGGCCAGACGTaGGAGATCGTGAGAATGATA | + |
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Preference number: 4 (lower is better) Translates to: TAEMIHFSCDMAQQLVALEMGQT*EIVRMI Trigger: TATCATTCTCACGATCTCCCACGTCTGGCCCATTTC...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | AAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGACAAAACATTAATAAGAAATaGGCCAGACGTGGGAGATCG | + |
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Preference number: 4 (lower is better) Translates to: KTLFWLLQAPHTGGIHRQNINKK*ARRGRS Trigger: CGATCTCCCACGTCTGGCCCATTTCTTATTAATGTT...TTGTCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | GATGTGACCACTGAGTACATTCTGAAACACAAGTGGATTGAGAAAACACTCTGGGGTGTAGAAACTCGCTaGGGGGTTATCAGGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: DVTTEYILKHKWIEKTLWGVETR*GVIRDV Trigger: GACATCCCTGATAACCCCCCAGCGAGTTTCTACACC...CCAGAGTGTTTTCTCAATCCACTTGTGTTTCAGAATGTACTCAGTGGTCACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | TCTAAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGATGTTCCTTTATAGGATaGATAATACCCCATGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SKTLFWLLQAPHTGGIHRCSFIG*IIPHVL Trigger: CAGCACATGGGGTATTATTCATCCTATAAAGGAACA...TCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCCAGTTAAGAAATTTCTaGAACACCGAACATCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: RVPAALAKNTVLFPSTHVQLRNF*NTEHRL Trigger: AAGACGATGTTCGGTGTTCCAGAAATTTCTTAACTG...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCCCAGATAGCGATAAGTaGCATTTATGGTTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TAEMIHFSCDMAQQLVALPDSDK*HLWFLR Trigger: TCTCAGGAACCATAAATGTCACTTATCGCTATCTGG...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTAGCAGCCCTCGGAAATaGGTCAATAGCCAATCGCAG | + |
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Preference number: 4 (lower is better) Translates to: NGLTVSHLSFSINYRRNLSSPRK*VNSQSQ Trigger: CTGCGATTGGCTATTGACTCATTTCCGAGGGCTGCT...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | CCCACAGCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGCAGCCCTCGGAAATaGGTCAATAGCCAATCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PTALLTQIVFCKDTTSMRSSPRK*VNSQSQ Trigger: CTGCGATTGGCTATTGACTCATTTCCGAGGGCTGCT...CCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGCTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR GCA 90 bp | TCTAAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGAACTGTAAGCCTTGCTTaGTTCATAGTTTTCAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SKTLFWLLQAPHTGGIHRTVSLA*FIVFKD Trigger: GTCTTTGAAAACTATGAAGCAAGCAAGGCTTACAGT...TCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCTGTTCCTTTATAGGATaGATAATACCCCATGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TAEMIHFSCDMAQQLVALCSFIG*IIPHVL Trigger: CAGCACATGGGGTATTATTCATCCTATAAAGGAACA...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CCA 90 bp | ACTATAATCAAAACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAAGGTGTAGAAACTCGCTaGGGGGTTATCAGGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: TIIKTAEMIHFSCDMAQQGVETR*GVIRDV Trigger: GACATCCCTGATAACCCCCCAGCGAGTTTCTACACC...TTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGTTTTGATTATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| 3UTR CAA 72 bp | TTAAGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTaGTTTCCCAGCACCCATGTCATATATCTCATAATG | + |
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Preference number: 4 (lower is better) Translates to: LRVPAALAKNTV*FPSTHVIYLIM Trigger: CATTATGAGATATATGACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCCTTCCTGCAATAATATaGTGGGCAAATTTCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: TAEMIHFSCDMAQQLVALLPAII*WANFCV Trigger: TACACAGAAATTTGCCCATCATATTATTGCAGGAAG...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | CCCACAGCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGGCTTGGAGCGAAATCTaGCTCTATCTTCTGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PTALLTQIVFCKDTTSMRAWSEI*LYLLGH Trigger: ATGACCCAGAAGATAGAGTCAGATTTCGCTCCAAGC...CCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGCTGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR TCA 90 bp | ACTGTTTTGTTTCCCAGCACCCATGTCATATATCTCATAATGTCCTGTAACTTGGCTTGGAGCGAAATCTaGCTCTATCTTCTGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLFPSTHVIYLIMSCNLAWSEI*LYLLGH Trigger: ATGACCCAGAAGATAGAGTCAGATTTCGCTCCAAGC...CAAGTTACAGGACATTATGAGATATATGACATGGGTGCTGGGAAACAAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTCGAATCACATTTTTCTaGGCCAGCAGCCCTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEIVCTNGLTVSHLSFSIRITFF*ASSPRK Trigger: TTTCCGAGGGCTGCTGGCTCAGAAAAATGTGATTCG...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCACTGTAAGCCTTGCTTaGTTCATAGTTTTCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TAEMIHFSCDMAQQLVALTVSLA*FIVFKD Trigger: GTCTTTGAAAACTATGAAGCAAGCAAGGCTTACAGT...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTTGTTTCCCAGCACCCATGTCATATATCTCATAATGTCCTGTAACTTGGAAATGGGCCAGACGTaGGAGATCGTGAGAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: TVLFPSTHVIYLIMSCNLEMGQT*EIVRMI Trigger: TATCATTCTCACGATCTCCCACGTCTGGCCCATTTC...CAAGTTACAGGACATTATGAGATATATGACATGGGTGCTGGGAAACAAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCACATAAGACAGCCATTTAATCTCCCCCAATATGATAAATTACAACAAGGTGTAGAAACTCGCTaGGGGGTTATCAGGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSHIRQPFNLPQYDKLQQGVETR*GVIRDV Trigger: GACATCCCTGATAACCCCCCAGCGAGTTTCTACACC...TTGTTGTAATTTATCATATTGGGGGAGATTAAATGGCTGTCTTATGTGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGACCACTGAGTACATTCTGAAACACAAGTGGATTGAGAAAACACTCTGGCGTTCAGAATTAAGTTaGTGTGTCGATGTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DVTTEYILKHKWIEKTLWRSELS*CVDVSL Trigger: AAGGGAAACATCGACACACCAACTTAATTCTGAACG...CCAGAGTGTTTTCTCAATCCACTTGTGTTTCAGAATGTACTCAGTGGTCACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTTTCTCTGTAAAGGTGTaGCAGCCAGATAGCGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGLTVSHLSFSINYRRNLFSVKV*QPDSDK Trigger: CTTATCGCTATCTGGCTGCCACACCTTTACAGAGAA...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGTTCTGTGTAATGTCTTaGACCATGGCATCTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTALLTQIVFCKDTTSMRFCVMS*TMASRH Trigger: ATGGCGAGATGCCATGGTCCAAGACATTACACAGAA...CCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGCTGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTTGTTTCCCAGCACCCATGTCATATATCTCATAATGTCCTGTAACTTGCAAAGACATTCATGTTaGTGTAGAAACTCGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVLFPSTHVIYLIMSCNLQRHSC*CRNSLG Trigger: CCCCAGCGAGTTTCTACACCAACATGAATGTCTTTG...CAAGTTACAGGACATTATGAGATATATGACATGGGTGCTGGGAAACAAAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGCAAAGACATTCATGTTaGTGTAGAAACTCGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTALLTQIVFCKDTTSMRQRHSC*CRNSLG Trigger: CCCCAGCGAGTTTCTACACCAACATGAATGTCTTTG...CCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGCTGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR TCA 90 bp | CCCACAGCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGCCAGATAGCGATAAGTaGCATTTATGGTTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTALLTQIVFCKDTTSMRPDSDK*HLWFLR Trigger: TCTCAGGAACCATAAATGTCACTTATCGCTATCTGG...CCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGCTGTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCCACATAAGACAGCCATTTAATCTCCCCCAATATGATAAATTACAACAAGCTTGGAGCGAAATCTaGCTCTATCTTCTGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSHIRQPFNLPQYDKLQQAWSEI*LYLLGH Trigger: ATGACCCAGAAGATAGAGTCAGATTTCGCTCCAAGC...TTGTTGTAATTTATCATATTGGGGGAGATTAAATGGCTGTCTTATGTGGGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTGTTTCCCTTATAAGTTaGTTGTCGCCTTCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NGLTVSHLSFSINYRRNLVSLIS*LSPSRT Trigger: TGTTCTGGAAGGCGACAAGCAACTTATAAGGGAAAC...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTTGTTTCCCAGCACCCATGTCATATATCTCATAATGTCCTGTAACTTGTGTTCCTTCCAAGGATaGTATGACTTTCTTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLFPSTHVIYLIMSCNLCSFQG*YDFLDG Trigger: GCCATCAAGAAAGTCATAGCATCCTTGGAAGGAACA...CAAGTTACAGGACATTATGAGATATATGACATGGGTGCTGGGAAACAAAACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTTTCTCTGTAAAGGTGTaGCAGCCAGATAGCGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: TEIVCTNGLTVSHLSFSIFSVKV*QPDSDK Trigger: CTTATCGCTATCTGGCTGCCACACCTTTACAGAGAA...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | ACTATAATCAAAACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTCTGTGTAATGTCTTaGACCATGGCATCTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TIIKTAEMIHFSCDMAQQFCVMS*TMASRH Trigger: ATGGCGAGATGCCATGGTCCAAGACATTACACAGAA...TTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGTTTTGATTATAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTTTCTGTGTAATGTCTTaGACCATGGCATCTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEIVCTNGLTVSHLSFSIFCVMS*TMASRH Trigger: ATGGCGAGATGCCATGGTCCAAGACATTACACAGAA...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATGAAATGGGCCAGACGTaGGAGATCGTGAGAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYEMGQT*EIVRMI Trigger: TATCATTCTCACGATCTCCCACGTCTGGCCCATTTC...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAACATTAATAAGAAATaGGCCAGACGTGGGAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: TEIVCTNGLTVSHLSFSININKK*ARRGRS Trigger: CGATCTCCCACGTCTGGCCCATTTCTTATTAATGTT...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCACATAAGACAGCCATTTAATCTCCCCCAATATGATAAATTACAACAACAAAGACATTCATGTTaGTGTAGAAACTCGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSHIRQPFNLPQYDKLQQQRHSC*CRNSLG Trigger: CCCCAGCGAGTTTCTACACCAACATGAATGTCTTTG...TTGTTGTAATTTATCATATTGGGGGAGATTAAATGGCTGTCTTATGTGGGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATCCAGATAGCGATAAGTaGCATTTATGGTTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYPDSDK*HLWFLR Trigger: TCTCAGGAACCATAAATGTCACTTATCGCTATCTGG...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTTGTTCCTTTATAGGATaGATAATACCCCATGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEIVCTNGLTVSHLSFSICSFIG*IIPHVL Trigger: CAGCACATGGGGTATTATTCATCCTATAAAGGAACA...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR TCA 90 bp | ACTATAATCAAAACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATGTTCCTTTATAGGATaGATAATACCCCATGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TIIKTAEMIHFSCDMAQQCSFIG*IIPHVL Trigger: CAGCACATGGGGTATTATTCATCCTATAAAGGAACA...TTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGTTTTGATTATAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR GCA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATGTTTCCCTTATAAGTTaGTTGTCGCCTTCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYVSLIS*LSPSRT Trigger: TGTTCTGGAAGGCGACAAGCAACTTATAAGGGAAAC...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCACATAAGACAGCCATTTAATCTCCCCCAATATGATAAATTACAACAAGTTTCCCTTATAAGTTaGTTGTCGCCTTCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FSHIRQPFNLPQYDKLQQVSLIS*LSPSRT Trigger: TGTTCTGGAAGGCGACAAGCAACTTATAAGGGAAAC...TTGTTGTAATTTATCATATTGGGGGAGATTAAATGGCTGTCTTATGTGGGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTACTGTAAGCCTTGCTTaGTTCATAGTTTTCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NGLTVSHLSFSINYRRNLTVSLA*FIVFKD Trigger: GTCTTTGAAAACTATGAAGCAAGCAAGGCTTACAGT...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | CCCACAGCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGCACTACTGTAAGCCTTaGTTGCTTCATAGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTALLTQIVFCKDTTSMRHYCKP*LLHSFQ Trigger: TTGAAAACTATGAAGCAAGCAAGGCTTACAGTAGTG...CCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGCTGTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTCACTACTGTAAGCCTTaGTTGCTTCATAGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NGLTVSHLSFSINYRRNLHYCKP*LLHSFQ Trigger: TTGAAAACTATGAAGCAAGCAAGGCTTACAGTAGTG...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTCAGTTAAGAAATTTCTaGAACACCGAACATCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NGLTVSHLSFSINYRRNLQLRNF*NTEHRL Trigger: AAGACGATGTTCGGTGTTCCAGAAATTTCTTAACTG...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| 3UTR CAA 72 bp | ATCATACAGCATGGGAACGTGCTTCATGGACCAACTTaGTTATCAAATTCAAATGAATCTCACAAACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IIQHGNVLHGPT*LSNSNESHKPL Trigger: AAGTGGTTTGTGAGATTCATTTGAATTTGATAACAAAGTTGGTCCATGAAGCACGTTCCCATGCTGTATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTCTTCCTGCAATAATATaGTGGGCAAATTTCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TEIVCTNGLTVSHLSFSILPAII*WANFCV Trigger: TACACAGAAATTTGCCCATCATATTATTGCAGGAAG...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTACTGTAAGCCTTGCTTaGTTCATAGTTTTCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TEIVCTNGLTVSHLSFSITVSLA*FIVFKD Trigger: GTCTTTGAAAACTATGAAGCAAGCAAGGCTTACAGT...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTCACTACTGTAAGCCTTaGTTGCTTCATAGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TEIVCTNGLTVSHLSFSIHYCKP*LLHSFQ Trigger: TTGAAAACTATGAAGCAAGCAAGGCTTACAGTAGTG...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATCGTTCAGAATTAAGTTaGTGTGTCGATGTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYRSELS*CVDVSL Trigger: AAGGGAAACATCGACACACCAACTTAATTCTGAACG...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CCA 90 bp | ACTATAATCAAAACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAACAGTTAAGAAATTTCTaGAACACCGAACATCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TIIKTAEMIHFSCDMAQQQLRNF*NTEHRL Trigger: AAGACGATGTTCGGTGTTCCAGAAATTTCTTAACTG...TTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGTTTTGATTATAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATCACTACTGTAAGCCTTaGTTGCTTCATAGTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYHYCKP*LLHSFQ Trigger: TTGAAAACTATGAAGCAAGCAAGGCTTACAGTAGTG...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCCGAACGTATCTCCCATaGAAGGTGACTTTCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RVPAALAKNTVLFPSTHVRTYLP*KVTFPK Trigger: TTTGGGGAAAGTCACCTTCAATGGGAGATACGTTCG...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCTGTTTCCCTTATAAGTaGCTTGTCGCCTTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RVPAALAKNTVLFPSTHVCFPYK*LVAFQN Trigger: GTTCTGGAAGGCGACAAGCAACTTATAAGGGAAACA...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGATTTCTGTGTAATGTCTaGGACCATGGCATCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKTLFWLLQAPHTGGIHRFLCNV*DHGISP Trigger: TGGCGAGATGCCATGGTCCAAGACATTACACAGAAA...TCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGCCTGCGGCTCTTGCAAAGAACACTGTTTTGTTTCCCAGCACCCATGTCTACTGTAAGCCTTGCTaGCTTCATAGTTTTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVPAALAKNTVLFPSTHVYCKPC*LHSFQR Trigger: TCTTTGAAAACTATGAAGCAAGCAAGGCTTACAGTA...GACATGGGTGCTGGGAAACAAAACAGTGTTCTTTGCAAGAGCCGCAGGCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | GATGTGACCACTGAGTACATTCTGAAACACAAGTGGATTGAGAAAACACTCTGGTTTCTGTGTAATGTCTaGGACCATGGCATCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DVTTEYILKHKWIEKTLWFLCNV*DHGISP Trigger: TGGCGAGATGCCATGGTCCAAGACATTACACAGAAA...CCAGAGTGTTTTCTCAATCCACTTGTGTTTCAGAATGTACTCAGTGGTCACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | TCTAAAACCCTCTTCTGGCTTCTGCAGGCACCACACACAGGTGGTATACACAGACATTCTTTCTGTGTTTaGGTAACACATATCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SKTLFWLLQAPHTGGIHRHSFCV*VTHILM Trigger: CATGAGGATATGTGTTACCAAAACACAGAAAGAATG...TCTGTGTATACCACCTGTGTGTGGTGCCTGCAGAAGCCAGAAGAGGGTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | GATGTGACCACTGAGTACATTCTGAAACACAAGTGGATTGAGAAAACACTCTGGTGTTTCCCTTATAAGTaGCTTGTCGCCTTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DVTTEYILKHKWIEKTLWCFPYK*LVAFQN Trigger: GTTCTGGAAGGCGACAAGCAACTTATAAGGGAAACA...CCAGAGTGTTTTCTCAATCCACTTGTGTTTCAGAATGTACTCAGTGGTCACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTTTTCTGTGTAATGTCTaGGACCATGGCATCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NGLTVSHLSFSINYRRNLFLCNV*DHGISP Trigger: TGGCGAGATGCCATGGTCCAAGACATTACACAGAAA...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | GATGTGACCACTGAGTACATTCTGAAACACAAGTGGATTGAGAAAACACTCTGGAGCATAATCTACGTTTaGCTTGGAGCGAAATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DVTTEYILKHKWIEKTLWSIIYV*LGAKSD Trigger: GTCAGATTTCGCTCCAAGCAAAACGTAGATTATGCT...CCAGAGTGTTTTCTCAATCCACTTGTGTTTCAGAATGTACTCAGTGGTCACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020039.13 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | ACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATTGGTTGCCCTCCATTCTTTCTGTGTTTaGGTAACACATATCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TAEMIHFSCDMAQQLVALHSFCV*VTHILM Trigger: CATGAGGATATGTGTTACCAAAACACAGAAAGAATG...GAGGGCAACCAATTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTCGAACGTATCTCCCATaGAAGGTGACTTTCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TEIVCTNGLTVSHLSFSIRTYLP*KVTFPK Trigger: TTTGGGGAAAGTCACCTTCAATGGGAGATACGTTCG...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | ACTATAATCAAAACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAACGAACGTATCTCCCATaGAAGGTGACTTTCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TIIKTAEMIHFSCDMAQQRTYLP*KVTFPK Trigger: TTTGGGGAAAGTCACCTTCAATGGGAGATACGTTCG...TTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGTTTTGATTATAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | ACTATAATCAAAACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAATGTTTCCCTTATAAGTaGCTTGTCGCCTTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TIIKTAEMIHFSCDMAQQCFPYK*LVAFQN Trigger: GTTCTGGAAGGCGACAAGCAACTTATAAGGGAAACA...TTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGTTTTGATTATAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | ACTATAATCAAAACTGCCGAGATGATTCATTTTTCTTGTGACATGGCACAGCAAGCGTTCAGAATTAAGTaGGTGTGTCGATGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TIIKTAEMIHFSCDMAQQAFRIK*VCRCFP Trigger: AGGGAAACATCGACACACCAACTTAATTCTGAACGC...TTGCTGTGCCATGTCACAAGAAAAATGAATCATCTCGGCAGTTTTGATTATAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATTTTCTGTGTAATGTCTaGGACCATGGCATCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYFLCNV*DHGISP Trigger: TGGCGAGATGCCATGGTCCAAGACATTACACAGAAA...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS TCA 90 bp | TATTCTTCAGGAGCATGTATAACCATTAATCTTCCTGCAATAATATaGTGGGCAAATTTCTGTGTAATGTCTTGGACCATGGCATCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: YSSGACITINLPAII*WANFCVMSWTMASR Trigger: GCGAGATGCCATGGTCCAAGACATTACACAGAAATTTGCCCATCATATTATTGCAGGAAGATTAATGGTTATACATGCTCCTGAAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS CCA 90 bp | AACACCGAACATCGTCTTCAAGCATCACGTAATAGTCAGAAGTATTaGCACAGAAATTTAGCAGAAAAGCATAATCTACGTTTTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NTEHRLQASRNSQKY*HRNLAEKHNLRFAW Trigger: CCAAGCAAAACGTAGATTATGCTTTTCTGCTAAATTTCTGTGCCAATACTTCTGACTATTACGTGATGCTTGAAGACGATGTTCGGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | TTCTCCCACATAAGACAGCCATTTAATCTCCCCCAATATGATAAATTACAACAATGTTTCCCTTATAAGTaGCTTGTCGCCTTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FSHIRQPFNLPQYDKLQQCFPYK*LVAFQN Trigger: GTTCTGGAAGGCGACAAGCAACTTATAAGGGAAACA...TTGTTGTAATTTATCATATTGGGGGAGATTAAATGGCTGTCTTATGTGGGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | TTCTCCCACATAAGACAGCCATTTAATCTCCCCCAATATGATAAATTACAACAAAGCATAATCTACGTTTaGCTTGGAGCGAAATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSHIRQPFNLPQYDKLQQSIIYV*LGAKSD Trigger: GTCAGATTTCGCTCCAAGCAAAACGTAGATTATGCT...TTGTTGTAATTTATCATATTGGGGGAGATTAAATGGCTGTCTTATGTGGGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | AATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTAATTACAGACGCAACCTTTACTGTAAGCCTTGCTaGCTTCATAGTTTTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NGLTVSHLSFSINYRRNLYCKPC*LHSFQR Trigger: TCTTTGAAAACTATGAAGCAAGCAAGGCTTACAGTA...AAGGTTGCGTCTGTAATTAATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | ACTGAAATTGTTTGTACGAATGGACTAACGGTAAGCCATCTCTCTTTCTCTATTCATTCTTTCTGTGTTTaGGTAACACATATCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TEIVCTNGLTVSHLSFSIHSFCV*VTHILM Trigger: CATGAGGATATGTGTTACCAAAACACAGAAAGAATG...AATAGAGAAAGAGAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATTACTGTAAGCCTTGCTaGCTTCATAGTTTTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYYCKPC*LHSFQR Trigger: TCTTTGAAAACTATGAAGCAAGCAAGGCTTACAGTA...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | TTCTCCCACATAAGACAGCCATTTAATCTCCCCCAATATGATAAATTACAACAATACTGTAAGCCTTGCTaGCTTCATAGTTTTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSHIRQPFNLPQYDKLQQYCKPC*LHSFQR Trigger: TCTTTGAAAACTATGAAGCAAGCAAGGCTTACAGTA...TTGTTGTAATTTATCATATTGGGGGAGATTAAATGGCTGTCTTATGTGGGAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS-3UTR CAA 90 bp | GCTCTACTTACACAAATAGTCTTTTGTAAAGATACCACTTCTATGAGGAGGTATCATTCTTTCTGTGTTTaGGTAACACATATCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ALLTQIVFCKDTTSMRRYHSFCV*VTHILM Trigger: CATGAGGATATGTGTTACCAAAACACAGAAAGAATG...ATACCTCCTCATAGAAGTGGTATCTTTACAAAAGACTATTTGTGTAAGTAGAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS CAA 72 bp | GTAATGTCTTGGACCATGGCATCTCGCCATGATGAATaGAAGTCTGCTAGATGTACTACGACTGAAATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VMSWTMASRHDE*KSARCTTTEIS Trigger: GGAAATTTCAGTCGTAGTACATCTAGCAGACTTCAATTCATCATGGCGAGATGCCATGGTCCAAGACATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS CAA 90 bp | TCAAGAGTTACCCAGTATGTTCCTTCCAAGGATGCTATGACTTTCTaGATGGCAGTTAAGAAATTTCTGGAACACCGAACATCGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRVTQYVPSKDAMTF*MAVKKFLEHRTSSS Trigger: TGAAGACGATGTTCGGTGTTCCAGAAATTTCTTAACTGCCATCAAGAAAGTCATAGCATCCTTGGAAGGAACATACTGGGTAACTCTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS CAA 90 bp | AATTTCTGTGTAATGTCTTGGACCATGGCATCTCGCCATGATGAATaGAAGTCTGCTAGATGTACTACGACTGAAATTTCCTTTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NFCVMSWTMASRHDE*KSARCTTTEISFSS Trigger: AGAACTAAAGGAAATTTCAGTCGTAGTACATCTAGCAGACTTCAATTCATCATGGCGAGATGCCATGGTCCAAGACATTACACAGAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS CAA 72 bp | AGAATTAAGTTGGTGTGTCGATGTTTCCCTTATAAGTaGCTTGTCGCCTTCCAGAACATAGCTATCTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RIKLVCRCFPYK*LVAFQNIAIFN Trigger: ATTGAAGATAGCTATGTTCTGGAAGGCGACAAGCAACTTATAAGGGAAACATCGACACACCAACTTAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000138522.8 ENSMUST00000156751.8 ENSMUST00000163753.8 ENSMUST00000179929.8 ENSMUST00000219195.2 |
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| CDS CAA 72 bp | ATCCTTGAAAGTGTGAACATAGCGTTCAGAATTAAGTaGGTGTGTCGATGTTTCCCTTATAAGTTGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ILESVNIAFRIK*VCRCFPYKLLV Trigger: GACAAGCAACTTATAAGGGAAACATCGACACACCAACTTAATTCTGAACGCTATGTTCACACTTTCAAGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000138522.8 ENSMUST00000156751.8 ENSMUST00000163753.8 ENSMUST00000179929.8 ENSMUST00000219195.2 |
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| CDS TCA 72 bp | GGAGCATGTATAACCATTAATCTTCCTGCAATAATATaGTGGGCAAATTTCTGTGTAATGTCTTGGACCATG | + |
|
Preference number: 6 (lower is better) Translates to: GACITINLPAII*WANFCVMSWTM Trigger: CATGGTCCAAGACATTACACAGAAATTTGCCCATCATATTATTGCAGGAAGATTAATGGTTATACATGCTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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| CDS CCA 72 bp | CATCGTCTTCAAGCATCACGTAATAGTCAGAAGTATTaGCACAGAAATTTAGCAGAAAAGCATAATCTACGT | + |
|
Preference number: 6 (lower is better) Translates to: HRLQASRNSQKY*HRNLAEKHNLR Trigger: ACGTAGATTATGCTTTTCTGCTAAATTTCTGTGCCAATACTTCTGACTATTACGTGATGCTTGAAGACGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020039.13 ENSMUST00000120748.2 ENSMUST00000163753.8 ENSMUST00000179929.8 |
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