Pregenerated sensors for MGAT4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036620Ensembl transcript IDs: ENSMUST00000041725.14, ENSMUST00000147468.8, ENSMUST00000151803.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATaGCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCAGCGACACCCTC | + |
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Preference number: 1 (lower is better) Translates to: SPSRLPGRTLQVGWI*LVLWGSSSSSSDTL Trigger: GAGGGTGTCGCTGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR CCA 90 bp | AACCCCAGGCCAGCCCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTaGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: NPRPARAACQAEPSR*GGYAWSSGAAAAVA Trigger: TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGGGCTGGCCTGGGGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR TCA 90 bp | CCATCTGGGCTCCTAGGGTACCGGAGAGTGGCTGAGCGGCCTTCCTaGAGGGCCTCCTTCTCTGACTGGGGGTTATCAAAGGGCAGCACC | + |
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Preference number: 1 (lower is better) Translates to: PSGLLGYRRVAERPS*RASFSDWGLSKGST Trigger: GGTGCTGCCCTTTGATAACCCCCAGTCAGAGAAGGAGGCCCTTCAGGAAGGCCGCTCAGCCACTCTCCGGTACCCTAGGAGCCCAGATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR GCA 90 bp | CTCCAGGGTGAAATGCTGGTACGTCTTGAGGCTTGTGCTCACCTCTaGCGGTGGGTTCACGTGCTCCTTCCGGAGAGCATGCTTTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: LQGEMLVRLEACAHL*RWVHVLLPESMLSK Trigger: TTTGGAAAGCATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGCACAAGCCTCAAGACGTACCAGCATTTCACCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR GCA 90 bp | AAGGGCAGCACCTCCACAGAAGTGTTGAAGAGCTTATCTTCCGGGTaGTCGATGTTCCCGCTTCGGAAGAAGAACCGCTCAAGGCGCAGT | + |
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Preference number: 1 (lower is better) Translates to: KGSTSTEVLKSLSSG*SMFPLRKKNRSRRS Trigger: ACTGCGCCTTGAGCGGTTCTTCTTCCGAAGCGGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGTGCTGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR CCA 90 bp | ACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCCTTaGAAGCCTTCTAGTCGGCCTTTTTCAGAAAGATCTCACTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: TPSEPWAPEPATEHP*KPSSRPFSERSHSK Trigger: TTTTGAGTGAGATCTTTCTGAAAAAGGCCGACTAGAAGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR TCA 90 bp | TCTCTGACTGGGGGTTATCAAAGGGCAGCACCTCCACAGAAGTGTTaGAGAGCTTATCTTCCGGGTGCTCGATGTTCCCGCTTCGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: SLTGGYQRAAPPQKC*RAYLPGARCSRFGR Trigger: TCTTCCGAAGCGGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGTGCTGCCCTTTGATAACCCCCAGTCAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGGGCAAACGGTTCGGTTCAGTTCTTTTTGGGCGGCAGCAGGCCGGCCCCGGTTCAGTTCTTTTTaGGCGGCAGCAGGCCGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GQGQTVRFSSFWAAAGRPRFSSF*AAAGRP Trigger: GGGCCGGCCTGCTGCCGCCCAAAAAGAACTGAACCG...GGGCCGGCCTGCTGCCGCCCAAAAAGAACTGAACCGAACCGTTTGCCCCTGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCTCACCTCTGCCGGTaGGTTCACGTGCTCCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: ACQAEPSRWGGYAWSSGAAHLCR*VHVLLP Trigger: CGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGC...TGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGATGCATTCCAGTGTTTaGGCCGCACACGGCGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PARQNPPGGVDMPGPLGQMHSSV*AAHGGH Trigger: GTGCCCGCCGTGTGCGGCGCAAACACTGGAATGCAT...CTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTTGGGGTGGATATGCCTaGTCCTCTGGGGCAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RTLQVGWICLVLWGSSSSWGGYA*SSGAAA Trigger: TGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCA...ACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGAGATCTCACTCAAAATaGCCCACACCGGGGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PARQNPPGGVDMPGPLGQRSHSK*PTPGSQ Trigger: CTGACTCCCCGGTGTGGGTCATTTTGAGTGAGATCT...CTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCGCAGTGGCTGGAAGAAGCGGAACCGGATAAAGTCTCCTGCGGCAGGTGTCAGGTGGGGTGGATATaGCTGGTCCTCTGGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KAQWLEEAEPDKVSCGRCQVGWI*LVLWGS Trigger: GCTGCCCCAGAGGACCAGGCATATCCACCCCACCTG...ACACCTGCCGCAGGAGACTTTATCCGGTTCCGCTTCTTCCAGCCACTGCGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTTGCGCCGCACACGGCGGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGACCCTCCAGGTGGGGTaGATATGCCTGGTCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SVCAAHGGHPRKSSSNGPTLQVG*ICLVLW Trigger: CCAGAGGACCAGGCATATCCACCCCACCTGGAGGGT...CGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCCGCCGTGTGCGGCGCAAACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGGCTCAAGACCACCGGCCAGGGTCAAGGCGCAGTGGCTaGAAGAAGCGGAACCGGATA | + |
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Preference number: 2 (lower is better) Translates to: GHPRKSSSNGPAQDHRPGSRRSG*KKRNRI Trigger: TATCCGGTTCCGCTTCTTCCAGCCACTGCGCCTTGA...CCCTGGCCGGTGGTCTTGAGCCGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR CAA 90 bp | TTCTCTGACTGGGGGTTATCAAAGGGCAGCACCTCCACAGAAGTGTaGAAGAGCTTATCTTCCGGGTGCTCGATGTTCCCGCTTCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FSDWGLSKGSTSTEV*KSLSSGCSMFPLRK Trigger: CTTCCGAAGCGGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGTGCTGCCCTTTGATAACCCCCAGTCAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCACCTCCACAGAAGTGTTGAAGAGCTTATCTTCCGGGTGCTCGATGTTCCCAATGCTGGTACGTCTTaGGGCTTGTGCTCACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QHLHRSVEELIFRVLDVPNAGTS*GLCSPL Trigger: CAGAGGTGAGCACAAGCCTCAAGACGTACCAGCATT...GGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAGGAGCCAATCTGGAGGTATCCATCTGGGCTCCTAGGGTACCGGAGAGTTCCAGGGTGAAATGCTaGTACGTCTTGAGGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: VEGANLEVSIWAPRVPESSRVKC*YVLRLV Trigger: CACAAGCCTCAAGACGTACCAGCATTTCACCCTGGA...ACTCTCCGGTACCCTAGGAGCCCAGATGGATACCTCCAGATTGGCTCCTTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACCTCCACAGAAGTGTTGAAGAGCTTATCTTCCGGGTGCTCGATGTTCCCTTCTCCAGGGTGAAATaGTGGTACGTCTTGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: QHLHRSVEELIFRVLDVPFSRVK*WYVLRL Trigger: AAGCCTCAAGACGTACCAGCATTTCACCCTGGAGAA...GGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR CCA 72 bp | CCAGCCCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTaGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PARAACQAEPSR*GGYAWSSGAAA Trigger: TGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR CCA 72 bp | CCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTaGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: PSRLPGRTLQVG*ICLVLWGSSSS Trigger: ACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR GCA 72 bp | CGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATaGCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RLPGRTLQVGWI*LVLWGSSSSSS Trigger: GCTGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR CCA 72 bp | AGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTaGGGCAGCAGCAGCAGTAGCAGCGACACCCTCGGA | + |
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Preference number: 3 (lower is better) Translates to: RTLQVGWICLVL*GSSSSSSDTLG Trigger: TCCGAGGGTGTCGCTGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR-3UTR CAA 90 bp | AGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTTATGCATTCCAGTGTTaGCGCCGCACACGGCGGGCA | + |
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Preference number: 3 (lower is better) Translates to: RTLQVGWICLVLWGSSSSYAFQC*RRTRRA Trigger: TGCCCGCCGTGTGCGGCGCAAACACTGGAATGCATA...ACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGAGCCGGCCACAGAGCACCCTTGGAAGCCTTCTAGTCGGCCTTTTTCAGTCGGTTCAGTTCTTTTaGGGCGGCAGCAGGCCGGCC | + |
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Preference number: 3 (lower is better) Translates to: LQSRPQSTLGSLLVGLFQSVQFF*GGSRPA Trigger: GGCCGGCCTGCTGCCGCCCAAAAAGAACTGAACCGA...CTGAAAAAGGCCGACTAGAAGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR TCA 72 bp | CTCCTAGGGTACCGGAGAGTGGCTGAGCGGCCTTCCTaGAGGGCCTCCTTCTCTGACTGGGGGTTATCAAAG | + |
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Preference number: 3 (lower is better) Translates to: LLGYRRVAERPS*RASFSDWGLSK Trigger: CTTTGATAACCCCCAGTCAGAGAAGGAGGCCCTTCAGGAAGGCCGCTCAGCCACTCTCCGGTACCCTAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR CCA 72 bp | CTGGTACGTCTTGAGGCTTGTGCTCACCTCTGCCGGTaGGTTCACGTGCTCCTTCCGGAGAGCATGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: LVRLEACAHLCR*VHVLLPESMLS Trigger: GGAAAGCATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGCACAAGCCTCAAGACGTACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR CCA 72 bp | CCGCTTCGGAAGAAGAACCGCTCAAGGCGCAGTGGCTaGAAGAAGCGGAACCGGATAAAGTCTCCTGCGGCA | + |
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Preference number: 3 (lower is better) Translates to: PLRKKNRSRRSG*KKRNRIKSPAA Trigger: TGCCGCAGGAGACTTTATCCGGTTCCGCTTCTTCCAGCCACTGCGCCTTGAGCGGTTCTTCTTCCGAAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCAGTCTGAATGGAGAGACGTAGTGCTTCCAGGGGGCCAAAGGCAGGATCCATATGCATTCCAGTGTTaGCGCCGCACACGGCGGGCA | + |
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Preference number: 3 (lower is better) Translates to: SQSEWRDVVLPGGQRQDPYAFQC*RRTRRA Trigger: TGCCCGCCGTGTGCGGCGCAAACACTGGAATGCATA...TGGATCCTGCCTTTGGCCCCCTGGAAGCACTACGTCTCTCCATTCAGACTGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR GCA 72 bp | GAAATGCTGGTACGTCTTGAGGCTTGTGCTCACCTCTaGCGGTGGGTTCACGTGCTCCTTCCGGAGAGCATG | + |
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Preference number: 3 (lower is better) Translates to: EMLVRLEACAHL*RWVHVLLPESM Trigger: CATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGCACAAGCCTCAAGACGTACCAGCATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR GCA 72 bp | CAGTGGCTGGAAGAAGCGGAACCGGATAAAGTCTCCTaGGGCAGGTGTGAAGGCCCAGAAGAAATCCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: QWLEEAEPDKVS*GRCEGPEEILP Trigger: CGGGAGGATTTCTTCTGGGCCTTCACACCTGCCGCAGGAGACTTTATCCGGTTCCGCTTCTTCCAGCCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR CCA 72 bp | GAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCCTTaGAAGCCTTCTAGTCGGCCTTTTTCAGAAAGATCT | + |
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Preference number: 3 (lower is better) Translates to: EPWAPEPATEHP*KPSSRPFSERS Trigger: AGATCTTTCTGAAAAAGGCCGACTAGAAGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR TCA 72 bp | GGGGGTTATCAAAGGGCAGCACCTCCACAGAAGTGTTaGAGAGCTTATCTTCCGGGTGCTCGATGTTCCCGC | + |
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Preference number: 3 (lower is better) Translates to: GGYQRAAPPQKC*RAYLPGARCSR Trigger: GCGGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGTGCTGCCCTTTGATAACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR GCA 72 bp | ACCTCCACAGAAGTGTTGAAGAGCTTATCTTCCGGGTaGTCGATGTTCCCGCTTCGGAAGAAGAACCGCTCA | + |
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Preference number: 3 (lower is better) Translates to: TSTEVLKSLSSG*SMFPLRKKNRS Trigger: TGAGCGGTTCTTCTTCCGAAGCGGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR-3UTR CAA 90 bp | CGGCCACAGAGCACCCTTGGAAGCCTTCTAGTCGGCCTTTTTCAGAAAGATCTCAAATGCTGGTACGTCTaGAGGCTTGTGCTCACCTCT | + |
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Preference number: 3 (lower is better) Translates to: RPQSTLGSLLVGLFQKDLKCWYV*RLVLTS Trigger: AGAGGTGAGCACAAGCCTCAAGACGTACCAGCATTT...GAGATCTTTCTGAAAAAGGCCGACTAGAAGGCTTCCAAGGGTGCTCTGTGGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| CDS-3UTR CCA 90 bp | CCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCACTCCGGTGCGGCCCTaGCCCACTCGCACTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PSRLPGRTLQVGWICLVLTPVRP*PTRTAG Trigger: GCCCGCAGTGCGAGTGGGCCAGGGCCGCACCGGAGT...GAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGCCCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCGTTTGGTCCTCCACCTaGCTCTCTCCTTGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RPARAACQAEPSRWGGYAVWSST*LSPWGP Trigger: GGGACCCCAAGGAGAGAGTCAGGTGGAGGACCAAAC...GGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGGGCTGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR GCA 90 bp | ACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCCTTGGAAGCCTCTGGCCGCTGAGCGCTaGGTACCAGGAGAGCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TPSEPWAPEPATEHPWKPLAAER*VPGERE Trigger: CTCTCGCTCTCCTGGTACGCAGCGCTCAGCGGCCAG...AGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR GCA 90 bp | CTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCCTGGCCCACTCGCACTaGGGGCTGCAGACTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LPGRTLQVGWICLVLWGSLAHSH*GLQTAL Trigger: GAGAGCAGTCTGCAGCCCGCAGTGCGAGTGGGCCAG...GCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCACCACGGATACTCCGGTaGGGCCCTGGCCCACTCGCA | + |
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Preference number: 4 (lower is better) Translates to: PSRWGGYAWSSGAAAAVAPRILR*GPGPLA Trigger: TGCGAGTGGGCCAGGGCCGCACCGGAGTATCCGTGG...TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR TCA 90 bp | ACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCCTTGGAAGCCTCACCTTTCTGGCCGCTaGGCGCTGCGTACCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TPSEPWAPEPATEHPWKPHLSGR*ALRTRR Trigger: TCTCCTGGTACGCAGCGCTCAGCGGCCAGAAAGGTG...AGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR GCA 90 bp | AGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTCCACGGATACTCCGGTaGGGCCCTGGCCCACTCGCA | + |
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Preference number: 4 (lower is better) Translates to: RTLQVGWICLVLWGSSSSPRILR*GPGPLA Trigger: TGCGAGTGGGCCAGGGCCGCACCGGAGTATCCGTGG...ACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGCCCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTCAGTCCTCGGAGGGCTaGTGGAGGGCAAAGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GQPEPPARQNPPGGVDMPQSSEG*WRAKFF Trigger: GAAGAACTTTGCCCTCCAGCAGCCCTCCGAGGACTG...AGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGGGCTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR CCA 90 bp | GATGTTCCCGCTTCGGAAGAAGAACCGCTCAAGGCGCAGTGGCTGGAAGAAGCGACTCCGGTGCGGCCCTaGCCCACTCGCACTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: DVPASEEEPLKAQWLEEATPVRP*PTRTAG Trigger: GCCCGCAGTGCGAGTGGGCCAGGGCCGCACCGGAGT...CGCTTCTTCCAGCCACTGCGCCTTGAGCGGTTCTTCTTCCGAAGCGGGAACATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| 3UTR CAA 72 bp | CACCGGCCAGGGGCAAACGGTTCGGTTCAGTTCTTTTaGGGCGGCAGCAGGCCGGCCCTCAGGCACAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: HRPGANGSVQFF*GGSRPALRHSV Trigger: CACACTGTGCCTGAGGGCCGGCCTGCTGCCGCCCAAAAAGAACTGAACCGAACCGTTTGCCCCTGGCCGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR TCA 90 bp | CCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCGGCTCAGCTCCGAGATaGGCGAGTGCAATGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: PSRLPGRTLQVGWICLVLGSAPR*ASAMCQ Trigger: CTGACACATTGCACTCGCTCATCTCGGAGCTGAGCC...GAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGGGGCAAACGGTTCGGTTCAGTTCTTTTTGGGCGGCAGCAGGCCGGCCCACTCGCACTGCGGGCTaGAGACTGCTCTCCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQGQTVRFSSFWAAAGRPTRTAG*RLLSLA Trigger: GGCTAAGGAGAGCAGTCTGCAGCCCGCAGTGCGAGT...GGGCCGGCCTGCTGCCGCCCAAAAAGAACTGAACCGAACCGTTTGCCCCTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTAGCAGCGACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCTGGAGGTATCCATCTaGGCTCCTAGGGTACCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVAATPSEPWAPEPATEHLEVSI*APRVPE Trigger: CTCCGGTACCCTAGGAGCCCAGATGGATACCTCCAG...GTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGTCGCTGCTACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAAGACGGTGGGCAGATaGAGTACGTGCCTGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRTLQVGWICLVLWGSKTVGR*STCLCE Trigger: CTCGCACAGGCACGTACTTCATCTGCCCACCGTCTT...GCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGGGCAAACGGTTCGGTTCAGTTCTTTTTGGGCGGCAGCAGGCCGGCCCGGCTCAGCTCCGAGATaGGCGAGTGCAATGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQGQTVRFSSFWAAAGRPGSAPR*ASAMCQ Trigger: CTGACACATTGCACTCGCTCATCTCGGAGCTGAGCC...GGGCCGGCCTGCTGCCGCCCAAAAAGAACTGAACCGAACCGTTTGCCCCTGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGTAGCAGCGACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGACAGCACCACGATGACTaGGTCTTCCTTCTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSDTLGTVGSRAGHRQHHDD*VFLLLR Trigger: CCGCAGGAGAAGGAAGACTCAGTCATCGTGGTGCTG...TCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGTCGCTGCTACTGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCACCCGCCAGTGATGAGTaGGTGCCCACATGCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ACQAEPSRWGGYAWSSGAPASDE*VPTCWK Trigger: TTTCCAGCATGTGGGCACTCACTCATCACTGGCGGG...TGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR TCA 90 bp | CCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCAAGGGCCTCCTTCTCTaGCTGGGGGTTATCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRLPGRTLQVGWICLVLKGLLL*LGVIKG Trigger: CCCTTTGATAACCCCCAGTCAGAGAAGGAGGCCCTT...GAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGCCCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCAGATCTCACTCAAAATaGCCCACACCGGGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPARAACQAEPSRWGGYARSHSK*PTPGSQ Trigger: CTGACTCCCCGGTGTGGGTCATTTTGAGTGAGATCT...GGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGGGCTGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR CCA 90 bp | CCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTCAAGGCGCAGTGGCTaGAAGAAGCGGAACCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PSRLPGRTLQVGWICLVLSRRSG*KKRNRI Trigger: TATCCGGTTCCGCTTCTTCCAGCCACTGCGCCTTGA...GAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCAAAGACGGTGGGCAGATaGAGTACGTGCCTGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRWGGYAWSSGAAAAVAKTVGR*STCLCE Trigger: CTCGCACAGGCACGTACTTCATCTGCCCACCGTCTT...TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTGCGCCGCACACGGCGGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGGCTGAGCGGCCTTCCTaGAGGGCCTCCTTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVCAAHGGHPRKSSSNGPAERPS*RASFSD Trigger: GTCAGAGAAGGAGGCCCTTCAGGAAGGCCGCTCAGC...CGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCCGCCGTGTGCGGCGCAAACACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR GCA 90 bp | GAGGCTTGTGCTCACCTCTGCCGGTGGGTTCACGTGCTCCTTCCGGAGAGCATGACTCGCACTGCGGGCTaGAGACTGCTCTCCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EACAHLCRWVHVLLPESMTRTAG*RLLSLA Trigger: GGCTAAGGAGAGCAGTCTGCAGCCCGCAGTGCGAGT...CATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGCACAAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCATCAGTCAAGTACGAGTaGACCTCGCGCCGTACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSRWGGYAWSSGAAAAVASVKYE*TSRRTL Trigger: GAGCGTACGGCGCGAGGTGCACTCGTACTTGACTGA...TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTGCTTGTGCTCACCTCTaGCGGTGGGTTCACGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLQVGWICLVLWGSSSSACAHL*RWVHVL Trigger: GAGCACGTGAACCCACCGGCAGAGGTGAGCACAAGC...ACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCACCGGATAAAGTCTCCTaGGGCAGGTGTGAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRWGGYAWSSGAAAAVAPDKVS*GRCEGP Trigger: TGGGCCTTCACACCTGCCGCAGGAGACTTTATCCGG...TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR GCA 90 bp | CCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGAGCTTATCTTCCGGGTaGTCGATGTTCCCGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PARQNPPGGVDMPGPLGQSLSSG*SMFPLR Trigger: CCGAAGCGGGAACATCGAGCACCCGGAAGATAAGCT...CTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR CCA 90 bp | ACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCCTTGGAAGCCTGATGGTGGAAGACGGTaGGCAGATGAAGTACGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPSEPWAPEPATEHPWKPDGGRR*ADEVRA Trigger: GGCACGTACTTCATCTGCCCACCGTCTTCCACCATC...AGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGTAGCAGCGACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGATGCCGAAGTGTACTGTaGGTCAGTCTCGGCGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSDTLGTVGSRAGHRCRSVL*VSLGDQ Trigger: CTGATCGCCGAGACTGACCCACAGTACACTTCGGCA...TCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGTCGCTGCTACTGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCACCAGGAGCCAGTCTATaGGCTTGTCCCGGTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ACQAEPSRWGGYAWSSGAPGASL*ACPGRT Trigger: TGTTCTACCGGGACAAGCCCATAGACTGGCTCCTGG...TGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGCCCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTTGCCTCTCGGATACTaGCCTCTTGATTTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPARAACQAEPSRWGGYALPLGY*PLDFFQ Trigger: CTGGAAGAAATCAAGAGGGCAGTATCCGAGAGGCAA...GGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGGGCTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTTTGCGCCGCACACGGCGGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGTTAGGCGGCCCCAAGTaGGATTGCCTTCTCCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVCAAHGGHPRKSSSNGPLGGPK*DCLLRP Trigger: GGGACGGAGAAGGCAATCGCACTTGGGGCCGCCTAA...CGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCCGCCGTGTGCGGCGCAAACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | GGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGGCTCAAGACCACCGGCCAGGGCAGTCCTCGGAGGGCTaGTGGAGGGCAAAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHPRKSSSNGPAQDHRPGQSSEG*WRAKFF Trigger: GAAGAACTTTGCCCTCCAGCAGCCCTCCGAGGACTG...CCCTGGCCGGTGGTCTTGAGCCGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCATCCTCGGAGGGCTGCTaGAGGGCAAAGTTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ACQAEPSRWGGYAWSSGASSEGC*RAKFFI Trigger: TATGAAGAACTTTGCCCTCCAGCAGCCCTCCGAGGA...TGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | CCCACACCGGGGAGTCAGTCTGAATGGAGAGACGTAGTGCTTCCAGGGGGCCAACAGCACCACGATGACTaGGTCTTCCTTCTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPGSQSEWRDVVLPGGQQHHDD*VFLLLR Trigger: CCGCAGGAGAAGGAAGACTCAGTCATCGTGGTGCTG...TTGGCCCCCTGGAAGCACTACGTCTCTCCATTCAGACTGACTCCCCGGTGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | GATGTTCCCGCTTCGGAAGAAGAACCGCTCAAGGCGCAGTGGCTGGAAGAAGCGGTTTGGTCCTCCACCTaGCTCTCTCCTTGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVPASEEEPLKAQWLEEAVWSST*LSPWGP Trigger: GGGACCCCAAGGAGAGAGTCAGGTGGAGGACCAAAC...CGCTTCTTCCAGCCACTGCGCCTTGAGCGGTTCTTCTTCCGAAGCGGGAACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | CCCACACCGGGGAGTCAGTCTGAATGGAGAGACGTAGTGCTTCCAGGGGGCCAATCAGTCAAGTACGAGTaGACCTCGCGCCGTACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTPGSQSEWRDVVLPGGQSVKYE*TSRRTL Trigger: GAGCGTACGGCGCGAGGTGCACTCGTACTTGACTGA...TTGGCCCCCTGGAAGCACTACGTCTCTCCATTCAGACTGACTCCCCGGTGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | CCGCACACGGCGGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGGCTCAAGACCCGATCAGCACCACGATaGCTGAGTCTTCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHTAGTQEKALLTARLKTRSAPR*LSLPSP Trigger: AGGAGAAGGAAGACTCAGTCATCGTGGTGCTGATCG...GGTCTTGAGCCGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCCGCCGTGTGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTGCGCCGCACACGGCGGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGTGGGGAACAAGGCCTTaGTGTTCTCTGTCACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVCAAHGGHPRKSSSNGPWGTRP*CSLSLP Trigger: CGGCAGTGACAGAGAACATCAAGGCCTTGTTCCCCA...CGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCCGCCGTGTGCGGCGCAAACACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAATGCTGGTACGTCTTaGGGCTTGTGCTCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLQVGWICLVLWGSSSSNAGTS*GLCSPL Trigger: CAGAGGTGAGCACAAGCCTCAAGACGTACCAGCATT...ACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR GCA 90 bp | ACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCCTTGGAAGCCTTTGCCTCTCGGATACTaGCCTCTTGATTTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSEPWAPEPATEHPWKPLPLGY*PLDFFQ Trigger: CTGGAAGAAATCAAGAGGGCAGTATCCGAGAGGCAA...AGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCTTCCAGGGGGCCAAAGGCAGGATCCACTTCTCCTTCAGCTACACCCTTGTTAGGCGGCCCCAAGTaGGATTGCCTTCTCCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SASRGPKAGSTSPSATPLLGGPK*DCLLRP Trigger: GGGACGGAGAAGGCAATCGCACTTGGGGCCGCCTAA...CAAGGGTGTAGCTGAAGGAGAAGTGGATCCTGCCTTTGGCCCCCTGGAAGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCTCCGAGATGAGCGAGTaGAATGTGTCAGTCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGRTLQVGWICLVLWGSSEMSE*NVSVKY Trigger: GTACTTGACTGACACATTGCACTCGCTCATCTCGGA...GCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | CCGAGCCGCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCGATGCCTTTGGACTGTaGATACATCATGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRLPGRTLQVGWICLVLDAFGL*IHHEEA Trigger: TGCTTCCTCATGATGTATGCACAGTCCAAAGGCATC...GAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGCGGCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGTCAGTTTCTGGATTTTaGCCGCCAGTGATGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PARQNPPGGVDMPGPLGQSVSGF*PPVMSE Trigger: CTCACTCATCACTGGCGGGCAAAATCCAGAAACTGA...CTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGTAGCAGCGACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGATTCTCCAGGGTGAAATaGTGGTACGTCTTGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSDTLGTVGSRAGHRFSRVK*WYVLRL Trigger: AAGCCTCAAGACGTACCAGCATTTCACCCTGGAGAA...TCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGTCGCTGCTACTGCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR CCA 90 bp | GCAGTAGCAGCGACACCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACTCAAGTAGTTGGGCTTaGCTACAATGTCATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVAATPSEPWAPEPATEHSSSWA*LQCHPP Trigger: TGGAGGATGACATTGTAGCCAAGCCCAACTACTTGA...GTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGGTGTCGCTGCTACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCGCAGTGGCTGGAAGAAGCGGAACCGGATAAAGTCTCCTGCGGCAGGTGTTGGGGAACAAGGCCTTaGTGTTCTCTGTCACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KAQWLEEAEPDKVSCGRCWGTRP*CSLSLP Trigger: CGGCAGTGACAGAGAACATCAAGGCCTTGTTCCCCA...ACACCTGCCGCAGGAGACTTTATCCGGTTCCGCTTCTTCCAGCCACTGCGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTGAAGAGCTTATCTTCCGGGTGCTCGATGTTCCCGCTTCGGAAGAAGAACCTGGCCCACTCGCACTaGGGGCTGCAGACTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKSLSSGCSMFPLRKKNLAHSH*GLQTAL Trigger: GAGAGCAGTCTGCAGCCCGCAGTGCGAGTGGGCCAG...GTTCTTCTTCCGAAGCGGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | GGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGGCTCAAGACCACCGGCCAGGGGATGTTCTCTGTCACTaGCGAAGTGTACTGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHPRKSSSNGPAQDHRPGDVLCH*RSVLWV Trigger: GACCCACAGTACACTTCGGCAGTGACAGAGAACATC...CCCTGGCCGGTGGTCTTGAGCCGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCCTTGGAAGCCTTCTGATGCCTTTGGACTGTaGATACATCATGAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSEPWAPEPATEHPWKPSDAFGL*IHHEEA Trigger: TGCTTCCTCATGATGTATGCACAGTCCAAAGGCATC...AGAAGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR CCA 90 bp | GATGTTCCCGCTTCGGAAGAAGAACCGCTCAAGGCGCAGTGGCTGGAAGAAGCGGATGGTGGAAGACGGTaGGCAGATGAAGTACGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DVPASEEEPLKAQWLEEADGGRR*ADEVRA Trigger: GGCACGTACTTCATCTGCCCACCGTCTTCCACCATC...CGCTTCTTCCAGCCACTGCGCCTTGAGCGGTTCTTCTTCCGAAGCGGGAACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCGGAACCGTGGGCTCCAGAGCCGGCCACAGAGCACCCTTGGAAGCCTTCTTCAAGTAGTTGGGCTTaGCTACAATGTCATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSEPWAPEPATEHPWKPSSSSWA*LQCHPP Trigger: TGGAGGATGACATTGTAGCCAAGCCCAACTACTTGA...AGAAGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAGCCCACGGTTCCGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS-3UTR CCA 90 bp | GGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGGCTCAAGACCACCGGCCAGGGTCCAGGGTGAAATGCTaGTACGTCTTGAGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHPRKSSSNGPAQDHRPGSRVKC*YVLRLV Trigger: CACAAGCCTCAAGACGTACCAGCATTTCACCCTGGA...CCCTGGCCGGTGGTCTTGAGCCGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTGCGCCGCACACGGCGGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGCCTCCACAGAAGTGTTaGAGAGCTTATCTTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVCAAHGGHPRKSSSNGPPPQKC*RAYLPG Trigger: ACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGG...CGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCCGCCGTGTGCGGCGCAAACACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR GCA 90 bp | CCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCATCCTTCCGGAGAGCATaGTTTCCAAAGTCTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: PSRWGGYAWSSGAAAAVASFRRA*FPKSLS Trigger: GGATAAAGACTTTGGAAAGCATGCTCTCCGGAAGGA...TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR CCA 90 bp | CTCCAGAGCCGGCCACAGAGCACCCTTGGAAGCCTTCTAGTCGGCCTTTTTCAGTCCTCGGAGGGCTGCTaGAGGGCAAAGTTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LQSRPQSTLGSLLVGLFQSSEGC*RAKFFI Trigger: TATGAAGAACTTTGCCCTCCAGCAGCCCTCCGAGGA...CTGAAAAAGGCCGACTAGAAGGCTTCCAAGGGTGCTCTGTGGCCGGCTCTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGTTATCCTTCAGTTTCTaGATTTTGCCCGCCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PARQNPPGGVDMPGPLGQLSFSF*ILPASD Trigger: ATCACTGGCGGGCAAAATCCAGAAACTGAAGGATAA...CTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR TCA 90 bp | AGTGTTTGCGCCGCACACGGCGGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGCAGGCTCAGATCCAGTaGCTTGAACATCTTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVCAAHGGHPRKSSSNGPQAQIQ*LEHLPN Trigger: ATTGGGAAGATGTTCAAGTCACTGGATCTGAGCCTG...CGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCCGCCGTGTGCGGCGCAAACACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR GCA 90 bp | GTGCTCGATGTTCCCGCTTCGGAAGAAGAACCGCTCAAGGCGCAGTGGCTGGAATCCGAGATGAGCGAGTaGAATGTGTCAGTCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLDVPASEEEPLKAQWLESEMSE*NVSVKY Trigger: GTACTTGACTGACACATTGCACTCGCTCATCTCGGA...TTCCAGCCACTGCGCCTTGAGCGGTTCTTCTTCCGAAGCGGGAACATCGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| CDS-3UTR TCA 90 bp | CAGCACCTCCACAGAAGTGTTGAAGAGCTTATCTTCCGGGTGCTCGATGTTCCCCGATCAGCACCACGATaGCTGAGTCTTCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHLHRSVEELIFRVLDVPRSAPR*LSLPSP Trigger: AGGAGAAGGAAGACTCAGTCATCGTGGTGCTGATCG...GGGAACATCGAGCACCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| CDS-3UTR GCA 90 bp | ACCCTTGGAAGCCTTCTAGTCGGCCTTTTTCAGAAAGATCTCACTCAAAATGACGATGTTCTCTGTCACTaGCGAAGTGTACTGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLGSLLVGLFQKDLTQNDDVLCH*RSVLWV Trigger: GACCCACAGTACACTTCGGCAGTGACAGAGAACATC...GTCATTTTGAGTGAGATCTTTCTGAAAAAGGCCGACTAGAAGGCTTCCAAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
||
| CDS GCA 90 bp | GCCCATCACCACGGATACTCCGGTGCGGCCCTGGCCCACTCGCACTaGGGGCTGCAGACTGCTCTCCTTAGCCAGCAGGTGCGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AHHHGYSGAALAHSH*GLQTALLSQQVRQM Trigger: CATCTGCCGCACCTGCTGGCTAAGGAGAGCAGTCTGCAGCCCGCAGTGCGAGTGGGCCAGGGCCGCACCGGAGTATCCGTGGTGATGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS GCA 90 bp | ACCACGGATACTCCGGTGCGGCCCTGGCCCACTCGCACTGCGGGCTaGAGACTGCTCTCCTTAGCCAGCAGGTGCGGCAGATGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTDTPVRPWPTRTAG*RLLSLASRCGRWWK Trigger: CTTCCACCATCTGCCGCACCTGCTGGCTAAGGAGAGCAGTCTGCAGCCCGCAGTGCGAGTGGGCCAGGGCCGCACCGGAGTATCCGTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS GCA 90 bp | ACGGCTTCAGTCGCGGATCCTCTGTTAGGCGGCCCCAAGTGCGATTaGCTTCTCCGTCCCGCAGCGCTTGCCTCTCGGATACTGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TASVADPLLGGPKCD*LLRPAALASRILPS Trigger: AGAGGGCAGTATCCGAGAGGCAAGCGCTGCGGGACGGAGAAGGCAATCGCACTTGGGGCCGCCTAACAGAGGATCCGCGACTGAAGCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS-3UTR CAA 90 bp | GGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGGCTCAAGACCACCGGCCAGGGGCGCTTCAGGCTCTCTaGCTCAGCCGCGTGCAAACG | + |
|
Preference number: 5 (lower is better) Translates to: GHPRKSSSNGPAQDHRPGALQAL*LSRVQT Trigger: CGTTTGCACGCGGCTGAGCAAGAGAGCCTGAAGCGC...CCCTGGCCGGTGGTCTTGAGCCGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR CAA 90 bp | CCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCACACCTGACTCTCTCCTaGGGGTCCCCAAAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSRWGGYAWSSGAAAAVAHLTLS*GSPKDS Trigger: AGAGTCCTTTGGGGACCCCAAGGAGAGAGTCAGGTG...TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS TCA 90 bp | GGAACTCGCGCTGGTAAATGTCCACCACGTCACCTTTCTGGCCGCTaGGCGCTGCGTACCAGGAGAGCGAGAGGAAGGCGCACAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTRAGKCPPRHLSGR*ALRTRRARGRRTSR Trigger: TCTGCTTGTGCGCCTTCCTCTCGCTCTCCTGGTACGCAGCGCTCAGCGGCCAGAAAGGTGACGTGGTGGACATTTACCAGCGCGAGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS TCA 90 bp | TCCTTAGCCAGCAGGTGCGGCAGATGGTGGAAGACGGTGGGCAGATaGAGTACGTGCCTGTGCGAGACGTTCCACGGCTTCAGTCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLASRCGRWWKTVGR*STCLCETFHGFSRG Trigger: TCCGCGACTGAAGCCGTGGAACGTCTCGCACAGGCACGTACTTCATCTGCCCACCGTCTTCCACCATCTGCCGCACCTGCTGGCTAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS GCA 90 bp | TCTTCCAGCACCAGGTTTAGCTCCTTGGAGCGCTTCAGGCTCTCTTaGTCAGCCGCGTGCAAACGGTCTCGCAGAGCCAGGAACTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSTRFSSLERFRLS*SAACKRSRRARNSR Trigger: GCGCGAGTTCCTGGCTCTGCGAGACCGTTTGCACGCGGCTGAGCAAGAGAGCCTGAAGCGCTCCAAGGAGCTAAACCTGGTGCTGGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 |
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| CDS-3UTR CAA 90 bp | GCCTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCATCGGATACTGCCCTCTaGATTTCTTCCAGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACQAEPSRWGGYAWSSGASDTAL*ISSSTR Trigger: CCTGGTGCTGGAAGAAATCAAGAGGGCAGTATCCGA...TGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR CAA 90 bp | CCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCAAAGCGGATCCGAAGGTaGGCCTTCTGCCGATCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PSRWGGYAWSSGAAAAVAKRIRR*AFCRSQ Trigger: TTGTGATCGGCAGAAGGCCAACCTTCGGATCCGCTT...TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR CAA 90 bp | CCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAGCAGCAGTAGCATGGAAAAGGGACGGCTaGAAGCGGATCCGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSRWGGYAWSSGAAAAVAWKRDG*KRIRRL Trigger: CAACCTTCGGATCCGCTTCAAGCCGTCCCTTTTCCA...TGCTACTGCTGCTGCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR CAA 90 bp | CTGCCAGGCAGAACCCTCCAGGTGGGGTGGATATGCCTGGTCCTCTGGGGCAGCAAATGCTGGTACGTCTaGAGGCTTGTGCTCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGRTLQVGWICLVLWGSKCWYV*RLVLTS Trigger: AGAGGTGAGCACAAGCCTCAAGACGTACCAGCATTT...GCTGCCCCAGAGGACCAGGCATATCCACCCCACCTGGAGGGTTCTGCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS TCA 90 bp | CGAAGTGTACTGTGGGTCAGTCTCGGCGATCAGCACCACGATGACTaGGTCTTCCTTCTCCTGCGGGCTCAGCTCCGAGATGAGCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSVLWVSLGDQHHDD*VFLLLRAQLRDERV Trigger: CACTCGCTCATCTCGGAGCTGAGCCCGCAGGAGAAGGAAGACTCAGTCATCGTGGTGCTGATCGCCGAGACTGACCCACAGTACACTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS GCA 90 bp | GTTAGGCGGCCCCAAGTGCGATTGCCTTCTCCGTCCCGCAGCGCTTaGCTCTCGGATACTGCCCTCTTGATTTCTTCCAGCACCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRRPQVRLPSPSRSA*LSDTALLISSSTRF Trigger: AAACCTGGTGCTGGAAGAAATCAAGAGGGCAGTATCCGAGAGGCAAGCGCTGCGGGACGGAGAAGGCAATCGCACTTGGGGCCGCCTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS GCA 90 bp | CTCAGCTCCGAGATGAGCGAGTGCAATGTGTCAGTCAAGTACGAGTaGACCTCGCGCCGTACGCTCGGAATGCCCATCACCACGGATACT | + |
|
Preference number: 5 (lower is better) Translates to: LSSEMSECNVSVKYE*TSRRTLGMPITTDT Trigger: AGTATCCGTGGTGATGGGCATTCCGAGCGTACGGCGCGAGGTGCACTCGTACTTGACTGACACATTGCACTCGCTCATCTCGGAGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS-3UTR CAA 90 bp | CCGCACACGGCGGGCACCCAAGAAAAAGCTCTTCTAACGGCCCGGCTCAAGACCACCTCCACAGAAGTGTaGAAGAGCTTATCTTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PHTAGTQEKALLTARLKTTSTEV*KSLSSG Trigger: CCCGGAAGATAAGCTCTTCAACACTTCTGTGGAGGT...GGTCTTGAGCCGGGCCGTTAGAAGAGCTTTTTCTTGGGTGCCCGCCGTGTGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS-3UTR CAA 90 bp | GTGCTCGATGTTCCCGCTTCGGAAGAAGAACCGCTCAAGGCGCAGTGGCTGGAATCGGATACTGCCCTCTaGATTTCTTCCAGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLDVPASEEEPLKAQWLESDTAL*ISSSTR Trigger: CCTGGTGCTGGAAGAAATCAAGAGGGCAGTATCCGA...TTCCAGCCACTGCGCCTTGAGCGGTTCTTCTTCCGAAGCGGGAACATCGAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| CDS-3UTR CAA 90 bp | GTAGAAGGAGCCAATCTGGAGGTATCCATCTGGGCTCCTAGGGTACCGGAGAGTCACCTGACTCTCTCCTaGGGGTCCCCAAAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VEGANLEVSIWAPRVPESHLTLS*GSPKDS Trigger: AGAGTCCTTTGGGGACCCCAAGGAGAGAGTCAGGTG...ACTCTCCGGTACCCTAGGAGCCCAGATGGATACCTCCAGATTGGCTCCTTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151803.8 |
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| CDS GCA 90 bp | GTGCTCACCTCTGCCGGTGGGTTCACGTGCTCCTTCCGGAGAGCATaGTTTCCAAAGTCTTTATCCTTCAGTTTCTGGATTTTGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLTSAGGFTCSFRRA*FPKSLSFSFWILPA Trigger: GGCGGGCAAAATCCAGAAACTGAAGGATAAAGACTTTGGAAAGCATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS CCA 90 bp | GGTGAAATGCTGGTACGTCTTGAGGCTTGTGCTCACCTCTGCCGGTaGGTTCACGTGCTCCTTCCGGAGAGCATGCTTTCCAAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GEMLVRLEACAHLCR*VHVLLPESMLSKVF Trigger: AAAGACTTTGGAAAGCATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGCACAAGCCTCAAGACGTACCAGCATTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS GCA 90 bp | TGGTACGTCTTGAGGCTTGTGCTCACCTCTGCCGGTGGGTTCACGTaGTCCTTCCGGAGAGCATGCTTTCCAAAGTCTTTATCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WYVLRLVLTSAGGFT*SFRRACFPKSLSFS Trigger: ACTGAAGGATAAAGACTTTGGAAAGCATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGCACAAGCCTCAAGACGTACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS GCA 72 bp | ACTCCGGTGCGGCCCTGGCCCACTCGCACTGCGGGCTaGAGACTGCTCTCCTTAGCCAGCAGGTGCGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TPVRPWPTRTAG*RLLSLASRCGR Trigger: TCTGCCGCACCTGCTGGCTAAGGAGAGCAGTCTGCAGCCCGCAGTGCGAGTGGGCCAGGGCCGCACCGGAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS GCA 72 bp | CACGGATACTCCGGTGCGGCCCTGGCCCACTCGCACTaGGGGCTGCAGACTGCTCTCCTTAGCCAGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HGYSGAALAHSH*GLQTALLSQQV Trigger: CACCTGCTGGCTAAGGAGAGCAGTCTGCAGCCCGCAGTGCGAGTGGGCCAGGGCCGCACCGGAGTATCCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS CCA 72 bp | GGAATGCCCATCACCACGGATACTCCGGTGCGGCCCTaGCCCACTCGCACTGCGGGCTGCAGACTGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GMPITTDTPVRP*PTRTAGCRLLS Trigger: GGAGAGCAGTCTGCAGCCCGCAGTGCGAGTGGGCCAGGGCCGCACCGGAGTATCCGTGGTGATGGGCATTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS GCA 72 bp | TCAAGTACGAGTGCACCTCGCGCCGTACGCTCGGAATaGCCATCACCACGGATACTCCGGTGCGGCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTSAPRAVRSE*PSPRILRCGPG Trigger: GCCAGGGCCGCACCGGAGTATCCGTGGTGATGGGCATTCCGAGCGTACGGCGCGAGGTGCACTCGTACTTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
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| CDS CAA 90 bp | CACGGCTTCAGTCGCGGATCCTCTGTTAGGCGGCCCCAAGTGCGATaGCCTTCTCCGTCCCGCAGCGCTTGCCTCTCGGATACTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HGFSRGSSVRRPQVR*PSPSRSACLSDTAL Trigger: GAGGGCAGTATCCGAGAGGCAAGCGCTGCGGGACGGAGAAGGCAATCGCACTTGGGGCCGCCTAACAGAGGATCCGCGACTGAAGCCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS GCA 72 bp | TCCTTGGAGCGCTTCAGGCTCTCTTGCTCAGCCGCGTaGAAACGGTCTCGCAGAGCCAGGAACTCGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLERFRLSCSAA*KRSRRARNSRW Trigger: CCAGCGCGAGTTCCTGGCTCTGCGAGACCGTTTGCACGCGGCTGAGCAAGAGAGCCTGAAGCGCTCCAAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 |
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| CDS GCA 72 bp | GTCGCGGATCCTCTGTTAGGCGGCCCCAAGTGCGATTaGCTTCTCCGTCCCGCAGCGCTTGCCTCTCGGATA | + |
|
Preference number: 6 (lower is better) Translates to: VADPLLGGPKCD*LLRPAALASRI Trigger: TATCCGAGAGGCAAGCGCTGCGGGACGGAGAAGGCAATCGCACTTGGGGCCGCCTAACAGAGGATCCGCGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS GCA 72 bp | GCTTCAGTCGCGGATCCTCTGTTAGGCGGCCCCAAGTaGGATTGCCTTCTCCGTCCCGCAGCGCTTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASVADPLLGGPK*DCLLRPAALAS Trigger: AGAGGCAAGCGCTGCGGGACGGAGAAGGCAATCGCACTTGGGGCCGCCTAACAGAGGATCCGCGACTGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS CAA 72 bp | AGTCGCGGATCCTCTGTTAGGCGGCCCCAAGTGCGATaGCCTTCTCCGTCCCGCAGCGCTTGCCTCTCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRGSSVRRPQVR*PSPSRSACLSD Trigger: ATCCGAGAGGCAAGCGCTGCGGGACGGAGAAGGCAATCGCACTTGGGGCCGCCTAACAGAGGATCCGCGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
||
| CDS TCA 72 bp | GCTGGTAAATGTCCACCACGTCACCTTTCTGGCCGCTaGGCGCTGCGTACCAGGAGAGCGAGAGGAAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGKCPPRHLSGR*ALRTRRARGRR Trigger: GCGCCTTCCTCTCGCTCTCCTGGTACGCAGCGCTCAGCGGCCAGAAAGGTGACGTGGTGGACATTTACCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS TCA 72 bp | AGCAGGTGCGGCAGATGGTGGAAGACGGTGGGCAGATaGAGTACGTGCCTGTGCGAGACGTTCCACGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRCGRWWKTVGR*STCLCETFHGF Trigger: GAAGCCGTGGAACGTCTCGCACAGGCACGTACTTCATCTGCCCACCGTCTTCCACCATCTGCCGCACCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS GCA 72 bp | AATGTCCACCACGTCACCTTTCTGGCCGCTGAGCGCTaGGTACCAGGAGAGCGAGAGGAAGGCGCACAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: NVHHVTFLAAER*VPGEREEGAQA Trigger: TGCTTGTGCGCCTTCCTCTCGCTCTCCTGGTACGCAGCGCTCAGCGGCCAGAAAGGTGACGTGGTGGACATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
||
| CDS GCA 72 bp | ACCAGGTTTAGCTCCTTGGAGCGCTTCAGGCTCTCTTaGTCAGCCGCGTGCAAACGGTCTCGCAGAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRFSSLERFRLS*SAACKRSRRAR Trigger: CCTGGCTCTGCGAGACCGTTTGCACGCGGCTGAGCAAGAGAGCCTGAAGCGCTCCAAGGAGCTAAACCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 |
||
| CDS GCA 72 bp | CCCCAAGTGCGATTGCCTTCTCCGTCCCGCAGCGCTTaGCTCTCGGATACTGCCCTCTTGATTTCTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PQVRLPSPSRSA*LSDTALLISSS Trigger: GCTGGAAGAAATCAAGAGGGCAGTATCCGAGAGGCAAGCGCTGCGGGACGGAGAAGGCAATCGCACTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS CAA 90 bp | TTGCCTTCTCCGTCCCGCAGCGCTTGCCTCTCGGATACTGCCCTCTaGATTTCTTCCAGCACCAGGTTTAGCTCCTTGGAGCGCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSPSRSACLSDTAL*ISSSTRFSSLERFR Trigger: CCTGAAGCGCTCCAAGGAGCTAAACCTGGTGCTGGAAGAAATCAAGAGGGCAGTATCCGAGAGGCAAGCGCTGCGGGACGGAGAAGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
||
| CDS GCA 72 bp | GAGATGAGCGAGTGCAATGTGTCAGTCAAGTACGAGTaGACCTCGCGCCGTACGCTCGGAATGCCCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: EMSECNVSVKYE*TSRRTLGMPIT Trigger: GGTGATGGGCATTCCGAGCGTACGGCGCGAGGTGCACTCGTACTTGACTGACACATTGCACTCGCTCATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000151803.8 |
||
| CDS CAA 72 bp | GCCCTCTTGATTTCTTCCAGCACCAGGTTTAGCTCCTaGGAGCGCTTCAGGCTCTCTTGCTCAGCCGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALLISSSTRFSS*ERFRLSCSAAC Trigger: GCACGCGGCTGAGCAAGAGAGCCTGAAGCGCTCCAAGGAGCTAAACCTGGTGCTGGAAGAAATCAAGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 |
||
| CDS CAA 72 bp | CCGTCCCGCAGCGCTTGCCTCTCGGATACTGCCCTCTaGATTTCTTCCAGCACCAGGTTTAGCTCCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSRSACLSDTAL*ISSSTRFSSLE Trigger: CTCCAAGGAGCTAAACCTGGTGCTGGAAGAAATCAAGAGGGCAGTATCCGAGAGGCAAGCGCTGCGGGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 ENSMUST00000151803.8 |
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| CDS CAA 90 bp | TCGGATACTGCCCTCTTGATTTCTTCCAGCACCAGGTTTAGCTCCTaGGAGCGCTTCAGGCTCTCTTGCTCAGCCGCGTGCAAACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SDTALLISSSTRFSS*ERFRLSCSAACKRS Trigger: AGACCGTTTGCACGCGGCTGAGCAAGAGAGCCTGAAGCGCTCCAAGGAGCTAAACCTGGTGCTGGAAGAAATCAAGAGGGCAGTATCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041725.14 ENSMUST00000147468.8 |
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| CDS GCA 72 bp | TTGAGGCTTGTGCTCACCTCTGCCGGTGGGTTCACGTaGTCCTTCCGGAGAGCATGCTTTCCAAAGTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LRLVLTSAGGFT*SFRRACFPKSL Trigger: TAAAGACTTTGGAAAGCATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGAGGTGAGCACAAGCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS GCA 72 bp | TCTGCCGGTGGGTTCACGTGCTCCTTCCGGAGAGCATaGTTTCCAAAGTCTTTATCCTTCAGTTTCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: SAGGFTCSFRRA*FPKSLSFSFWI Trigger: AATCCAGAAACTGAAGGATAAAGACTTTGGAAAGCATGCTCTCCGGAAGGAGCACGTGAACCCACCGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS CAA 72 bp | TCCTTTTCCCAACGACTTGAGGCTGAGGCTGGTCTCTaGTGGTCACCCATGTATTCGGTGGGAAAGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SFSQRLEAEAGL*WSPMYSVGKKR Trigger: TCTTTTCTTTCCCACCGAATACATGGGTGACCACAAGAGACCAGCCTCAGCCTCAAGTCGTTGGGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147468.8 |
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| CDS TCA 72 bp | CATGAGGATGAACTCCACAATCAGGCTCAGATCCAGTaGCTTGAACATCTTCCCAATGAAGCCCAACTGCGA | + |
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Preference number: 6 (lower is better) Translates to: HEDELHNQAQIQ*LEHLPNEAQLR Trigger: TCGCAGTTGGGCTTCATTGGGAAGATGTTCAAGTCACTGGATCTGAGCCTGATTGTGGAGTTCATCCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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| CDS CCA 72 bp | TTTTCCCAACGACTTGAGGCTGAGGCTGGTCTCTTGTaGTCACCCATGTATTCGGTGGGAAAGAAAAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: FSQRLEAEAGLL*SPMYSVGKKRV Trigger: TACTCTTTTCTTTCCCACCGAATACATGGGTGACCACAAGAGACCAGCCTCAGCCTCAAGTCGTTGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147468.8 |
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| CDS CAA 72 bp | AGGATGAACTCCACAATCAGGCTCAGATCCAGTGACTaGAACATCTTCCCAATGAAGCCCAACTGCGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: RMNSTIRLRSSD*NIFPMKPNCEN Trigger: GTTCTCGCAGTTGGGCTTCATTGGGAAGATGTTCAAGTCACTGGATCTGAGCCTGATTGTGGAGTTCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041725.14 |
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